Rmu_sc0002944.1_g000021

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002944.1
OG0000123
Physical Location & Seq
Reverse (-)
83241 .. 84177
937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002944.1_g000021.1.cds

Sequence Viewer

Length: 885 bp
atgctggtgttggcagactacgacgacatcagctcggtagaggcggtgcctttgcattatctagaaatctgggtggcagtgaaggggttgcgaattgccatgcgcaatgagcgagctttaaccctacttgggaatgcgctggggagttttgttcggattgatgtggcggtgttgcagtggaaagatcccgtccaaaggattcgtctgaaccatgacgtccgacggcgggtctgggctcgccgtacatactctttctctccggtggtttcggtgactttggatttccactatgagaaatgccacggcatctgcccagcatgtggcttttttggtcacggtggaggtagctgtgataaggggttgatggcggacgcttcagcgttgtcggcgtctgtcatggagccggagatgactggaacaatagcggagcaggctgggctggtgccagaaactggcttgagggctccggattttttggcgggaaatcctaacttcaaagtagggttgaccgctgacctggaggtgactaggctggggcaatgtgggttggaggaaaacgagccgggccttactcttaggaatgatggatccaaggttggtactgggccttctcttcctttctttggagagccagctaaggttttgggtactcgaaggccacgagaagatgtttcggtggaggttggcaagcgtcctaagctagcaattgttcctctggatgtccaatcggacgctttagtagacgtcccggttgcttctattgagaaagtacagaagaagaagggtagaccccgtggtcggcggaacaaacccaggcttccaatcatggcagatgatgatccaattgtgaaggggatggaggagtccccgtccaaggaggattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

294

Amino Acids

32.06

Weight (kDa)

6.97

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 795
AatII GACGTC 2 cut(s) 219, 747
Acc16I TGCGCA 1 cut(s) 104
AccB1I GGYRCC 2 cut(s) 46, 442
AccB7I CCANNNNNTGG 2 cut(s) 320, 452
AccI GTMKAC 2 cut(s) 741, 787
AccIII TCCGGA 1 cut(s) 466
AciI CCGC 8 cut(s) 44, 167, 226, 368, 425, 479, 510, 802
AclWI GGATC 4 cut(s) 179, 582, 595, 833
AcuI CTGAAG 1 cut(s) 360
AcyI GRCGYC 3 cut(s) 216, 389, 744
AfaI GTAC 4 cut(s) 244, 601, 649, 771
AfiI CCNNNNNNNGG 8 cut(s) 129, 195, 226, 320, 452, 623, 798, 874
AgsI TTSAA 1 cut(s) 496
AhdI GACNNNNNGTC 1 cut(s) 227
AjnI CCWGG 2 cut(s) 516, 812
AluBI AGCT 5 cut(s) 33, 116, 348, 635, 700
AluI AGCT 5 cut(s) 33, 116, 348, 635, 700
AlwI GGATC 4 cut(s) 179, 582, 595, 833
AlwNI CAGNNNCTG 1 cut(s) 452
Aor13HI TCCGGA 1 cut(s) 466
AoxI GGCC 3 cut(s) 565, 605, 656
ArsI GACNNNNNNTTYG 2 cut(s) 187, 219
AspLEI GCGC 2 cut(s) 105, 139
AspS9I GGNCC 2 cut(s) 565, 605
AsuC2I CCSGG 2 cut(s) 564, 749
AsuHPI GGTGA 2 cut(s) 283, 535
AsuNHI GCTAGC 1 cut(s) 700
BamHI GGATCC 1 cut(s) 587
BanI GGYRCC 2 cut(s) 46, 442
BanII GRGCYC 2 cut(s) 238, 466
BarI GAAGNNNNNNTAC 2 cut(s) 592, 624
BauI CACGAG 1 cut(s) 660
BccI CCATC 3 cut(s) 358, 578, 850
BceAI ACGGC 3 cut(s) 225, 239, 319
BciT130I CCWGG 2 cut(s) 518, 814
BcnI CCSGG 2 cut(s) 564, 749
BfaI CTAG 3 cut(s) 62, 528, 701
Bme1390I CCNGG 4 cut(s) 518, 564, 749, 814
BmeRI GACNNNNNGTC 1 cut(s) 227
BmgT120I GGNCC 2 cut(s) 565, 605
BmiI GGNNCC 5 cut(s) 48, 402, 444, 465, 589
BmrFI CCNGG 4 cut(s) 518, 564, 749, 814
BmrI ACTGGG 1 cut(s) 612
BmsI GCATC 1 cut(s) 315
BmtI GCTAGC 1 cut(s) 704
BmuI ACTGGG 1 cut(s) 612
BpmI CTGGAG 1 cut(s) 539
Bpu10I CCTNAGC 2 cut(s) 636, 696
BpuEI CTTGAG 1 cut(s) 478
BpuMI CCSGG 2 cut(s) 564, 749
BsaBI GATNNNNATC 1 cut(s) 837
BsaHI GRCGYC 3 cut(s) 216, 389, 744
BsaJI CCNNGG 5 cut(s) 301, 591, 793, 812, 873
BsaWI WCCGGW 2 cut(s) 259, 466
BsaXI ACNNNNNCTCC 2 cut(s) 854, 884
Bsc4I CCNNNNNNNGG 8 cut(s) 129, 195, 226, 320, 452, 623, 798, 874
Bse1I ACTGG 3 cut(s) 418, 457, 607
Bse3DI GCAATG 2 cut(s) 112, 545
Bse8I GATNNNNATC 1 cut(s) 837
BseAI TCCGGA 1 cut(s) 466
BseBI CCWGG 2 cut(s) 518, 814
BseDI CCNNGG 5 cut(s) 301, 591, 793, 812, 873
BseGI GGATG 2 cut(s) 724, 861
BseJI GATNNNNATC 1 cut(s) 837
BseLI CCNNNNNNNGG 8 cut(s) 129, 195, 226, 320, 452, 623, 798, 874
BseMI GCAATG 2 cut(s) 112, 545
BseNI ACTGG 3 cut(s) 418, 457, 607
BseRI GAGGAG 1 cut(s) 875
BseYI CCCAGC 4 cut(s) 139, 313, 434, 532
BshFI GGCC 3 cut(s) 567, 607, 658
BshNI GGYRCC 2 cut(s) 46, 442
BsiSI CCGG 5 cut(s) 260, 404, 467, 563, 749
BslFI GGGAC 2 cut(s) 731, 850
BslI CCNNNNNNNGG 8 cut(s) 129, 195, 226, 320, 452, 623, 798, 874
BsmFI GGGAC 2 cut(s) 731, 850
BsmI GAATGC 1 cut(s) 139
BsnI GGCC 3 cut(s) 567, 607, 658
Bsp1286I GDGCHC 2 cut(s) 238, 466
Bsp13I TCCGGA 1 cut(s) 466
Bsp143I GATC 3 cut(s) 184, 587, 838
BspACI CCGC 8 cut(s) 44, 167, 226, 368, 425, 479, 510, 802
BspANI GGCC 3 cut(s) 567, 607, 658
BspEI TCCGGA 1 cut(s) 466
BspLI GGNNCC 5 cut(s) 48, 402, 444, 465, 589
BspOI GCTAGC 1 cut(s) 704
BspPI GGATC 4 cut(s) 179, 582, 595, 833
BspT107I GGYRCC 2 cut(s) 46, 442
BsrDI GCAATG 2 cut(s) 112, 545
BsrI ACTGG 3 cut(s) 418, 457, 607
BssECI CCNNGG 5 cut(s) 301, 591, 793, 812, 873
BssMI GATC 3 cut(s) 184, 587, 838
BssNI GRCGYC 3 cut(s) 216, 389, 744
BssSI CACGAG 1 cut(s) 660
BssT1I CCWWGG 2 cut(s) 591, 873
Bst2BI CACGAG 1 cut(s) 660
Bst2UI CCWGG 2 cut(s) 518, 814
Bst4CI ACNGT 1 cut(s) 338
Bst6I CTCTTC 1 cut(s) 618
BstACI GRCGYC 3 cut(s) 216, 389, 744
BstC8I GCNNGC 6 cut(s) 114, 238, 432, 633, 689, 702
BstDEI CTNAG 3 cut(s) 575, 636, 696
BstDSI CCRYGG 2 cut(s) 301, 793
BstF5I GGATG 2 cut(s) 724, 861
BstHHI GCGC 2 cut(s) 105, 139
BstKTI GATC 3 cut(s) 187, 590, 841
BstMBI GATC 3 cut(s) 184, 587, 838
BstMWI GCNNNNNNNGC 5 cut(s) 109, 386, 431, 436, 697
BstNI CCWGG 2 cut(s) 518, 814
BstNSI RCATGY 1 cut(s) 321
BstSCI CCNGG 4 cut(s) 516, 562, 747, 812
BstX2I RGATCY 2 cut(s) 184, 587
BstYI RGATCY 2 cut(s) 184, 587
BsuRI GGCC 3 cut(s) 567, 607, 658
BtgI CCRYGG 2 cut(s) 301, 793
BtsCI GGATG 2 cut(s) 724, 861
BtsI GCAGTG 2 cut(s) 84, 182
BtsIMutI CAGTG 2 cut(s) 84, 182
Cac8I GCNNGC 6 cut(s) 114, 238, 432, 633, 689, 702
CaiI CAGNNNCTG 1 cut(s) 452
CfoI GCGC 2 cut(s) 105, 139
Cfr13I GGNCC 2 cut(s) 565, 605
CseI GACGC 4 cut(s) 378, 380, 680, 740
Csp6I GTAC 4 cut(s) 243, 600, 648, 770
CviAII CATG 5 cut(s) 100, 212, 318, 397, 826
CviQI GTAC 4 cut(s) 243, 600, 648, 770
DdeI CTNAG 3 cut(s) 575, 636, 696
DpnI GATC 3 cut(s) 186, 589, 840
DpnII GATC 3 cut(s) 184, 587, 838
DrdI GACNNNNNNGTC 1 cut(s) 795
DriI GACNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 1 cut(s) 618
Eam1105I GACNNNNNGTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 618
EciI GGCGGA 2 cut(s) 383, 817
Eco130I CCWWGG 2 cut(s) 591, 873
Eco24I GRGCYC 2 cut(s) 238, 466
Eco57I CTGAAG 1 cut(s) 360
EcoRII CCWGG 2 cut(s) 516, 812
EcoT14I CCWWGG 2 cut(s) 591, 873
EcoT38I GRGCYC 2 cut(s) 238, 466
ErhI CCWWGG 2 cut(s) 591, 873
FaeI CATG 5 cut(s) 103, 215, 321, 400, 829
FaiI YATR 7 cut(s) 101, 213, 247, 291, 319, 398, 827
FaqI GGGAC 2 cut(s) 731, 850
FatI CATG 5 cut(s) 99, 211, 317, 396, 825
FauI CCCGC 2 cut(s) 219, 472
FblI GTMKAC 2 cut(s) 741, 787
FokI GGATG 2 cut(s) 731, 868
FriOI GRGCYC 2 cut(s) 238, 466
FspBI CTAG 3 cut(s) 62, 528, 701
FspI TGCGCA 1 cut(s) 104
GlaI GCGC 2 cut(s) 104, 138
GsaI CCCAGC 4 cut(s) 143, 317, 438, 536
GsuI CTGGAG 1 cut(s) 539
HaeIII GGCC 3 cut(s) 567, 607, 658
HapII CCGG 5 cut(s) 260, 404, 467, 563, 749
HgaI GACGC 4 cut(s) 378, 380, 680, 740
HhaI GCGC 2 cut(s) 105, 139
Hin1I GRCGYC 3 cut(s) 216, 389, 744
Hin1II CATG 5 cut(s) 103, 215, 321, 400, 829
Hin6I GCGC 2 cut(s) 103, 137
HinP1I GCGC 2 cut(s) 103, 137
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HinfI GANTC 2 cut(s) 199, 863
HpaII CCGG 5 cut(s) 260, 404, 467, 563, 749
HphI GGTGA 2 cut(s) 283, 535
Hpy166II GTNNAC 3 cut(s) 507, 742, 788
Hpy188I TCNGA 4 cut(s) 156, 207, 221, 730
Hpy188III TCNNGA 3 cut(s) 62, 467, 716
Hpy8I GTNNAC 3 cut(s) 507, 742, 788
Hpy99I CGWCG 2 cut(s) 26, 225
HpyAV CCTTC 5 cut(s) 76, 618, 648, 775, 844
HpyCH4III ACNGT 1 cut(s) 338
HpyCH4IV ACGT 2 cut(s) 216, 744
HpyCH4V TGCA 2 cut(s) 55, 175
HpyF10VI GCNNNNNNNGC 5 cut(s) 109, 386, 431, 436, 697
HpyF3I CTNAG 3 cut(s) 575, 636, 696
HpySE526I ACGT 2 cut(s) 216, 744
Hsp92I GRCGYC 3 cut(s) 216, 389, 744
Hsp92II CATG 5 cut(s) 103, 215, 321, 400, 829
HspAI GCGC 2 cut(s) 103, 137
Kpn2I TCCGGA 1 cut(s) 466
Kzo9I GATC 3 cut(s) 184, 587, 838
LmnI GCTCC 3 cut(s) 400, 427, 469
LweI GCATC 1 cut(s) 315
MaeI CTAG 3 cut(s) 62, 528, 701
MaeII ACGT 2 cut(s) 216, 744
MaeIII GTNAC 3 cut(s) 271, 332, 523
MalI GATC 3 cut(s) 186, 589, 840
MboI GATC 3 cut(s) 184, 587, 838
MboII GAAGA 4 cut(s) 605, 677, 787, 790
MfeI CAATTG 2 cut(s) 705, 843
MflI RGATCY 2 cut(s) 184, 587
MhlI GDGCHC 2 cut(s) 238, 466
MluCI AATT 3 cut(s) 93, 705, 843
MlyI GAGTC 1 cut(s) 872
MmeI TCCRAC 2 cut(s) 244, 528
MnlI CCTC 9 cut(s) 34, 335, 453, 514, 544, 673, 723, 853, 871
MroI TCCGGA 1 cut(s) 466
MseI TTAA 1 cut(s) 119
MspA1I CMGCKG 1 cut(s) 512
MspI CCGG 5 cut(s) 260, 404, 467, 563, 749
MspR9I CCNGG 4 cut(s) 518, 564, 749, 814
MunI CAATTG 2 cut(s) 705, 843
Mva1269I GAATGC 1 cut(s) 139
MvaI CCWGG 2 cut(s) 518, 814
MwoI GCNNNNNNNGC 5 cut(s) 109, 386, 431, 436, 697
NciI CCSGG 2 cut(s) 564, 749
NdeII GATC 3 cut(s) 184, 587, 838
NheI GCTAGC 1 cut(s) 700
NlaIII CATG 5 cut(s) 103, 215, 321, 400, 829
NlaIV GGNNCC 5 cut(s) 48, 402, 444, 465, 589
NmuCI GTSAC 3 cut(s) 271, 332, 523
NsbI TGCGCA 1 cut(s) 104
NspI RCATGY 1 cut(s) 321
PcsI WCGNNNNNNNCGW 1 cut(s) 658
PctI GAATGC 1 cut(s) 139
PfeI GAWTC 1 cut(s) 199
PflMI CCANNNNNTGG 2 cut(s) 320, 452
PleI GAGTC 1 cut(s) 871
PpsI GAGTC 1 cut(s) 871
Psp6I CCWGG 2 cut(s) 516, 812
PspFI CCCAGC 4 cut(s) 139, 313, 434, 532
PspGI CCWGG 2 cut(s) 516, 812
PspN4I GGNNCC 5 cut(s) 48, 402, 444, 465, 589
PspPI GGNCC 2 cut(s) 565, 605
PstNI CAGNNNCTG 1 cut(s) 452
PsuI RGATCY 2 cut(s) 184, 587
RsaI GTAC 4 cut(s) 244, 601, 649, 771
RsaNI GTAC 4 cut(s) 243, 600, 648, 770
SaqAI TTAA 1 cut(s) 119
Sau3AI GATC 3 cut(s) 184, 587, 838
Sau96I GGNCC 2 cut(s) 565, 605
SchI GAGTC 1 cut(s) 872
ScrFI CCNGG 4 cut(s) 518, 564, 749, 814
SduI GDGCHC 2 cut(s) 238, 466
SfaNI GCATC 1 cut(s) 315
SmlI CTYRAG 1 cut(s) 457
SmoI CTYRAG 1 cut(s) 457
Sse9I AATT 3 cut(s) 93, 705, 843
SsiI CCGC 8 cut(s) 44, 167, 226, 368, 425, 479, 510, 802
SspMI CTAG 3 cut(s) 62, 528, 701
StyD4I CCNGG 4 cut(s) 516, 562, 747, 812
StyI CCWWGG 2 cut(s) 591, 873
TaaI ACNGT 1 cut(s) 338
TaiI ACGT 2 cut(s) 219, 747
TaqI TCGA 1 cut(s) 652
TasI AATT 3 cut(s) 93, 705, 843
TatI WGTACW 1 cut(s) 769
TfiI GAWTC 1 cut(s) 199
Tru1I TTAA 1 cut(s) 119
Tru9I TTAA 1 cut(s) 119
TscAI CASTG 2 cut(s) 84, 182
TseFI GTSAC 3 cut(s) 271, 332, 523
Tsp45I GTSAC 3 cut(s) 271, 332, 523
TspRI CASTG 2 cut(s) 84, 182
Van91I CCANNNNNTGG 2 cut(s) 320, 452
XbaI TCTAGA 1 cut(s) 61
XceI RCATGY 1 cut(s) 321
XmiI GTMKAC 2 cut(s) 741, 787
XspI CTAG 3 cut(s) 62, 528, 701
ZraI GACGTC 2 cut(s) 217, 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.