Rmu_sc0003129.1_g000006

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003129.1
OG0000123
Physical Location & Seq
Reverse (-)
16995 .. 17990
996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003129.1_g000006.1.cds

Sequence Viewer

Length: 996 bp
atggcggaggagaacacggtggctccttttgcactttctaaggaggccattgtgagccttgttggaggagagaatgcaatccatgattcattcttctacctctgtggtcggcttttatccaagaagacagtggtgatcccatcattctcggcagtgatctccaacgtttgggggttgaaggagagagttctaatctggcaggaggaggaggatatctttgtcttccaattcaaggatagtgaggtgaagactcggattctctcaagcggtctatggttctacaacaactctatgctgctgctagtagactatgatggtgtttcagatctcggggcggctcagctgcatctcctggaggtttgggtggcggtgaagggtttgcgcattgctatgcgcaacgagaaggccttaaacttaattggacgagcgttgggttccttcgttcgggcggtgcagcggaaggatctgactcagaggatccatgtggtacaggacgttcaacgaaggatttgggcgcggcagacctttcaattctctcagacggtctcggtgttggtggaactccagtatgaaaaatgtcatgggttgtgtgcggcttgtggctttttcggtcatggtgggggtatatgtgatggcagattggagacggaggagcgcgctgcgctggctctagcggtgtcggaccgggctgtggaagcaaacccacgtgggttggcggcgtcggaagtggcggtttctgggtcagagatactggtgatggtgggactaggtgcgccagaggtttctggggtggcggaagtggctggaacgctggtgctaggatcgggttcgccagccgcgaggaactctgtacgcgttttggaaaattcggcggcaaaccctaattttgaattagggttagggatggcaatggggcgggttggggatggggatcacaataccatccccatccccggagtcattttctacccccatccccgccccaatccccaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

331

Amino Acids

35.84

Weight (kDa)

5.85

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 383, 395
AccB7I CCANNNNNTGG 1 cut(s) 168
AccI GTMKAC 1 cut(s) 306
AccII CGCG 4 cut(s) 517, 657, 839, 855
AclI AACGTT 1 cut(s) 165
AclWI GGATC 6 cut(s) 130, 471, 472, 485, 829, 939
AcsI RAATTY 1 cut(s) 865
AcvI CACGTG 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 719
AfaI GTAC 2 cut(s) 489, 852
AfiI CCNNNNNNNGG 5 cut(s) 168, 232, 444, 691, 953
AflIII ACRYGT 1 cut(s) 853
AgsI TTSAA 5 cut(s) 178, 232, 500, 530, 890
AjnI CCWGG 1 cut(s) 351
AluBI AGCT 1 cut(s) 343
AluI AGCT 1 cut(s) 343
Alw26I GTCTC 2 cut(s) 550, 638
AlwI GGATC 6 cut(s) 130, 471, 472, 485, 829, 939
Ama87I CYCGRG 1 cut(s) 329
AoxI GGCC 2 cut(s) 45, 405
ApeKI GCWGC 5 cut(s) 295, 298, 343, 454, 659
ApoI RAATTY 1 cut(s) 865
AspLEI GCGC 7 cut(s) 384, 396, 517, 657, 659, 664, 775
AspS9I GGNCC 1 cut(s) 682
AsuC2I CCSGG 2 cut(s) 686, 954
AsuHPI GGTGA 4 cut(s) 145, 256, 382, 766
AvaI CYCGRG 1 cut(s) 329
AvaII GGWCC 1 cut(s) 682
BamHI GGATCC 1 cut(s) 477
BbrPI CACGTG 1 cut(s) 707
BbsI GAAGAC 3 cut(s) 131, 214, 254
BbvI GCAGC 5 cut(s) 282, 285, 330, 466, 646
BccI CCATC 9 cut(s) 148, 308, 626, 751, 898, 920, 950, 956, 981
BciT130I CCWGG 1 cut(s) 353
BcnI CCSGG 2 cut(s) 686, 954
BcoDI GTCTC 2 cut(s) 550, 638
BfaI CTAG 4 cut(s) 302, 671, 767, 818
BglII AGATCT 1 cut(s) 325
BlpI GCTNAGC 1 cut(s) 339
Bme1390I CCNGG 3 cut(s) 353, 686, 954
Bme18I GGWCC 1 cut(s) 682
BmeT110I CYCGRG 1 cut(s) 329
BmgT120I GGNCC 1 cut(s) 682
BmiI GGNNCC 3 cut(s) 24, 436, 479
BmrFI CCNGG 3 cut(s) 353, 686, 954
BmsI GCATC 1 cut(s) 355
BpiI GAAGAC 3 cut(s) 131, 214, 254
BpmI CTGGAG 2 cut(s) 374, 548
Bpu1102I GCTNAGC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 2 cut(s) 686, 954
BsaAI YACGTR 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 930
BsaHI GRCGYC 1 cut(s) 719
BsaI GGTCTC 1 cut(s) 550
BsaJI CCNNGG 1 cut(s) 952
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 232, 444, 691, 953
Bse1I ACTGG 2 cut(s) 565, 756
Bse3DI GCAATG 2 cut(s) 384, 915
Bse8I GATNNNNATC 1 cut(s) 930
BseBI CCWGG 1 cut(s) 353
BseDI CCNNGG 1 cut(s) 952
BseGI GGATG 5 cut(s) 909, 931, 942, 948, 973
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 5 cut(s) 168, 232, 444, 691, 953
BseMI GCAATG 2 cut(s) 384, 915
BseMII CTCAG 3 cut(s) 353, 485, 551
BseNI ACTGG 2 cut(s) 565, 756
BsePI GCGCGC 1 cut(s) 655
BseRI GAGGAG 5 cut(s) 23, 81, 218, 221, 665
BseXI GCAGC 5 cut(s) 282, 285, 330, 466, 646
BsgI GTGCAG 1 cut(s) 473
Bsh1236I CGCG 4 cut(s) 517, 657, 839, 855
BshFI GGCC 2 cut(s) 47, 407
BsiHKCI CYCGRG 1 cut(s) 329
BsiSI CCGG 2 cut(s) 685, 954
BslFI GGGAC 1 cut(s) 777
BslI CCNNNNNNNGG 5 cut(s) 168, 232, 444, 691, 953
BsmAI GTCTC 2 cut(s) 550, 638
BsmBI CGTCTC 1 cut(s) 638
BsmFI GGGAC 1 cut(s) 777
BsmI GAATGC 1 cut(s) 79
BsnI GGCC 2 cut(s) 47, 407
Bso31I GGTCTC 1 cut(s) 550
BsoBI CYCGRG 1 cut(s) 329
Bsp143I GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
Bsp1720I GCTNAGC 1 cut(s) 339
BspANI GGCC 2 cut(s) 47, 407
BspCNI CTCAG 3 cut(s) 352, 484, 550
BspFNI CGCG 4 cut(s) 517, 657, 839, 855
BspLI GGNNCC 3 cut(s) 24, 436, 479
BspPI GGATC 6 cut(s) 130, 471, 472, 485, 829, 939
BspTNI GGTCTC 1 cut(s) 550
BsrDI GCAATG 2 cut(s) 384, 915
BsrI ACTGG 2 cut(s) 565, 756
BssECI CCNNGG 1 cut(s) 952
BssHII GCGCGC 1 cut(s) 655
BssMI GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
BssNI GRCGYC 1 cut(s) 719
Bst2UI CCWGG 1 cut(s) 353
Bst4CI ACNGT 3 cut(s) 19, 130, 544
BstACI GRCGYC 1 cut(s) 719
BstBAI YACGTR 1 cut(s) 707
BstC8I GCNNGC 3 cut(s) 657, 666, 834
BstDEI CTNAG 4 cut(s) 39, 339, 471, 537
BstF5I GGATG 5 cut(s) 909, 931, 942, 948, 973
BstFNI CGCG 4 cut(s) 517, 657, 839, 855
BstHHI GCGC 7 cut(s) 384, 396, 517, 657, 659, 664, 775
BstKTI GATC 7 cut(s) 138, 159, 328, 466, 480, 824, 934
BstMAI GTCTC 2 cut(s) 550, 638
BstMBI GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
BstMWI GCNNNNNNNGC 5 cut(s) 29, 661, 665, 695, 800
BstNI CCWGG 1 cut(s) 353
BstSCI CCNGG 3 cut(s) 351, 684, 952
BstUI CGCG 4 cut(s) 517, 657, 839, 855
BstV1I GCAGC 5 cut(s) 282, 285, 330, 466, 646
BstV2I GAAGAC 3 cut(s) 131, 214, 254
BstX2I RGATCY 3 cut(s) 325, 463, 477
BstYI RGATCY 3 cut(s) 325, 463, 477
BsuRI GGCC 2 cut(s) 47, 407
BtsCI GGATG 5 cut(s) 909, 931, 942, 948, 973
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 2 cut(s) 135, 159
Cac8I GCNNGC 3 cut(s) 657, 666, 834
CfoI GCGC 7 cut(s) 384, 396, 517, 657, 659, 664, 775
Cfr13I GGNCC 1 cut(s) 682
CpoI CGGWCCG 1 cut(s) 682
CseI GACGC 1 cut(s) 708
Csp6I GTAC 2 cut(s) 488, 851
CspCI CAANNNNNGTGG 2 cut(s) 693, 728
CspI CGGWCCG 1 cut(s) 682
CviAII CATG 4 cut(s) 83, 482, 581, 614
CviQI GTAC 2 cut(s) 488, 851
DdeI CTNAG 4 cut(s) 39, 339, 471, 537
DpnI GATC 7 cut(s) 137, 158, 327, 465, 479, 823, 933
DpnII GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
EciI GGCGGA 2 cut(s) 20, 809
Eco147I AGGCCT 1 cut(s) 407
Eco31I GGTCTC 1 cut(s) 550
Eco32I GATATC 1 cut(s) 214
Eco47I GGWCC 1 cut(s) 682
Eco72I CACGTG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 329
EcoRII CCWGG 1 cut(s) 351
EcoRV GATATC 1 cut(s) 214
Esp3I CGTCTC 1 cut(s) 638
FaeI CATG 4 cut(s) 86, 485, 584, 617
FaqI GGGAC 1 cut(s) 777
FatI CATG 4 cut(s) 82, 481, 580, 613
FauI CCCGC 2 cut(s) 909, 986
FblI GTMKAC 1 cut(s) 306
FokI GGATG 5 cut(s) 916, 929, 935, 938, 960
FspBI CTAG 4 cut(s) 302, 671, 767, 818
FspI TGCGCA 2 cut(s) 383, 395
GlaI GCGC 7 cut(s) 383, 395, 516, 656, 658, 663, 774
GsuI CTGGAG 2 cut(s) 374, 548
HaeIII GGCC 2 cut(s) 47, 407
HapII CCGG 2 cut(s) 685, 954
HgaI GACGC 1 cut(s) 708
HhaI GCGC 7 cut(s) 384, 396, 517, 657, 659, 664, 775
Hin1I GRCGYC 1 cut(s) 719
Hin1II CATG 4 cut(s) 86, 485, 584, 617
Hin6I GCGC 7 cut(s) 382, 394, 515, 655, 657, 662, 773
HinP1I GCGC 7 cut(s) 382, 394, 515, 655, 657, 662, 773
HinfI GANTC 5 cut(s) 86, 250, 256, 469, 957
HpaII CCGG 2 cut(s) 685, 954
HphI GGTGA 4 cut(s) 145, 256, 382, 766
Hpy166II GTNNAC 1 cut(s) 307
Hpy188I TCNGA 8 cut(s) 255, 325, 468, 474, 540, 682, 724, 745
Hpy8I GTNNAC 1 cut(s) 307
Hpy99I CGWCG 1 cut(s) 724
HpyAV CCTTC 6 cut(s) 172, 367, 397, 448, 454, 498
HpyCH4III ACNGT 3 cut(s) 19, 130, 544
HpyCH4IV ACGT 3 cut(s) 165, 495, 706
HpyCH4V TGCA 4 cut(s) 32, 77, 346, 454
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 661, 665, 695, 800
HpyF3I CTNAG 4 cut(s) 39, 339, 471, 537
HpySE526I ACGT 3 cut(s) 165, 495, 706
Hsp92I GRCGYC 1 cut(s) 719
Hsp92II CATG 4 cut(s) 86, 485, 584, 617
HspAI GCGC 7 cut(s) 382, 394, 515, 655, 657, 662, 773
Kzo9I GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
LmnI GCTCC 2 cut(s) 28, 652
Lsp1109I GCAGC 5 cut(s) 282, 285, 330, 466, 646
LweI GCATC 1 cut(s) 355
MaeI CTAG 4 cut(s) 302, 671, 767, 818
MaeII ACGT 3 cut(s) 165, 495, 706
MalI GATC 7 cut(s) 137, 158, 327, 465, 479, 823, 933
MboI GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
MboII GAAGA 4 cut(s) 85, 136, 214, 259
MflI RGATCY 3 cut(s) 325, 463, 477
MluCI AATT 6 cut(s) 227, 417, 530, 865, 883, 890
MluI ACGCGT 1 cut(s) 853
MlyI GAGTC 3 cut(s) 244, 463, 966
MmeI TCCRAC 4 cut(s) 43, 186, 660, 702
MseI TTAA 2 cut(s) 410, 416
MslI CAYNNNNRTG 1 cut(s) 389
MspA1I CMGCKG 2 cut(s) 343, 457
MspI CCGG 2 cut(s) 685, 954
MspR9I CCNGG 3 cut(s) 353, 686, 954
MteI GCGCNGCGC 1 cut(s) 660
Mva1269I GAATGC 1 cut(s) 79
MvaI CCWGG 1 cut(s) 353
MvnI CGCG 4 cut(s) 517, 657, 839, 855
MwoI GCNNNNNNNGC 5 cut(s) 29, 661, 665, 695, 800
NciI CCSGG 2 cut(s) 686, 954
NdeII GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
NlaIII CATG 4 cut(s) 86, 485, 584, 617
NlaIV GGNNCC 3 cut(s) 24, 436, 479
NmeAIII GCCGAG 1 cut(s) 128
NsbI TGCGCA 2 cut(s) 383, 395
PauI GCGCGC 1 cut(s) 655
PceI AGGCCT 1 cut(s) 407
PcsI WCGNNNNNNNCGW 1 cut(s) 836
PctI GAATGC 1 cut(s) 79
PfeI GAWTC 2 cut(s) 86, 256
PflMI CCANNNNNTGG 1 cut(s) 168
PfoI TCCNGGA 1 cut(s) 351
PleI GAGTC 3 cut(s) 244, 463, 965
PmaCI CACGTG 1 cut(s) 707
PmlI CACGTG 1 cut(s) 707
PpsI GAGTC 3 cut(s) 244, 463, 965
Ppu21I YACGTR 1 cut(s) 707
Psp1406I AACGTT 1 cut(s) 165
Psp6I CCWGG 1 cut(s) 351
PspCI CACGTG 1 cut(s) 707
PspGI CCWGG 1 cut(s) 351
PspN4I GGNNCC 3 cut(s) 24, 436, 479
PspPI GGNCC 1 cut(s) 682
PsrI GAACNNNNNNTAC 2 cut(s) 480, 512
PsuI RGATCY 3 cut(s) 325, 463, 477
PteI GCGCGC 1 cut(s) 655
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 2 cut(s) 489, 852
RsaNI GTAC 2 cut(s) 488, 851
RseI CAYNNNNRTG 1 cut(s) 389
Rsr2I CGGWCCG 1 cut(s) 682
RsrII CGGWCCG 1 cut(s) 682
SaqAI TTAA 2 cut(s) 410, 416
Sau3AI GATC 7 cut(s) 135, 156, 325, 463, 477, 821, 931
Sau96I GGNCC 1 cut(s) 682
SchI GAGTC 3 cut(s) 244, 463, 966
ScrFI CCNGG 3 cut(s) 353, 686, 954
SfaNI GCATC 1 cut(s) 355
SinI GGWCC 1 cut(s) 682
SmiMI CAYNNNNRTG 1 cut(s) 389
SmlI CTYRAG 1 cut(s) 262
SmoI CTYRAG 1 cut(s) 262
Sse9I AATT 6 cut(s) 227, 417, 530, 865, 883, 890
SseBI AGGCCT 1 cut(s) 407
SspMI CTAG 4 cut(s) 302, 671, 767, 818
StuI AGGCCT 1 cut(s) 407
StyD4I CCNGG 3 cut(s) 351, 684, 952
TaaI ACNGT 3 cut(s) 19, 130, 544
TaiI ACGT 3 cut(s) 168, 498, 709
TaqII GACCGA 1 cut(s) 599
TasI AATT 6 cut(s) 227, 417, 530, 865, 883, 890
TauI GCSGC 6 cut(s) 338, 520, 596, 719, 839, 875
TfiI GAWTC 2 cut(s) 86, 256
Tru1I TTAA 2 cut(s) 410, 416
Tru9I TTAA 2 cut(s) 410, 416
TscAI CASTG 2 cut(s) 135, 159
TseI GCWGC 5 cut(s) 295, 298, 343, 454, 659
TspDTI ATGAA 2 cut(s) 78, 585
TspGWI ACGGA 1 cut(s) 662
TspRI CASTG 2 cut(s) 135, 159
Van91I CCANNNNNTGG 1 cut(s) 168
VpaK11BI GGWCC 1 cut(s) 682
XapI RAATTY 1 cut(s) 865
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 4 cut(s) 302, 671, 767, 818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.