FvH4_1g20041

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000123
Physical Location & Seq
Forward (+)
12212212 .. 12213312
1101 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g20041.t1

Sequence Viewer

Length: 1101 bp
ATGGAATCTAAAGCGAAACTATTGGTTCGTGAAGAGGAATCGGGTCGCTTTGTCTTTCAATTCAAGACGAAGGCAAAGAGAGACCGAACCGCTGGTGGAGGACCGTGGTCTTTCAACGGTGGGATGCTTATCCTAGCGGAGTATGACGGGTTTAGCCCGGTGGAGGATGTTTCTTTGAATCACTTGGAGGTGTGGATCTCGATTGCCGGACTCCGTTTCGCCATGAGGAACAATATGGTTCTTAGCCGTGTTGCGAATGGTTTGGGTGTTTTTGTGAGAGCAGATCCGGGTCTGATTCAGAGGAAGGAGAAGATTCAGCGAGATAGGGTTGTTTTGGACGTTCGAAACCGGATTCCGGCCAAACGCATTTTTGACTACTCGCCGAAGTTAGCTGTCAAGTTGGAGTTCAAGGTTGAAAGAGCTCATGGGATTTGCAAGGATTGTGGTTTCTTTGGGCATGGAGGAGGTATCTGTGACAAAGGCTTGATCTGTGGATTACCAGTGGTTGAGGCAGTTAATGCCGTCGACGGTGAGGCCGAGCTTTTAGCGAGCCGAGCGACGGAAGTTAGTGGTTTGGTGAAGGAGCCGACTCTGCAGATGAAGGAAGCTGCGCCGACGGGGTTGGAGGATGGACTGAGGGGCAGCGAGGAGGCGGCTGCGCTGGTTGTCTCTTCCCCAAATTTTTTGACGGGAAAACCTAGTTTCAAACTAGGGTTGACTGAGCTGATAGGGTTGACTGAGGATGTTGGGCCGGGTTTTAGGCCTCTGAAGGTTGGGCCGGGTGACTCTGGGCTGAAAAGGAAGTTTGGTTTTGGGACTGAAGCTGATGGGTTTGGGTTTTCTAGAGATGGGTCAGCTGGGACTGATTTGGTGCTGAAGAAGCCAAAGTTGAGCTTTCAATCTGATGAGCTCGTAGAGGTTCCAGTGCGGTTTGGAAGTATTTCTCGAAAAAAGTTTCCCAAGAAGAGAGGTCGTCCAGGCGGCAGTCGTAACAAGAAAAGGATAGCAAATGGAGATCCGAAACTGTCGGATTCTATGGCTCCTAGTTTGGAAGGAGCCAATGCAAAAACAGGCCTCGAGTCTGAGGTTGGGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

367

Amino Acids

39.46

Weight (kDa)

9.28

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 525
AciI CCGC 5 cut(s) 90, 137, 653, 928, 981
AclWI GGATC 3 cut(s) 203, 278, 1010
AcoI YGGCCR 1 cut(s) 357
AcsI RAATTY 1 cut(s) 679
AcuI CTGAAG 3 cut(s) 788, 840, 896
AfiI CCNNNNNNNGG 3 cut(s) 163, 355, 559
AgsI TTSAA 8 cut(s) 59, 64, 115, 178, 409, 416, 706, 899
AjnI CCWGG 1 cut(s) 976
AluBI AGCT 9 cut(s) 392, 422, 541, 608, 724, 824, 857, 894, 910
AluI AGCT 9 cut(s) 392, 422, 541, 608, 724, 824, 857, 894, 910
Alw21I GWGCWC 2 cut(s) 424, 912
Alw26I GTCTC 2 cut(s) 75, 673
AlwI GGATC 3 cut(s) 203, 278, 1010
Ama87I CYCGRG 1 cut(s) 1076
AoxI GGCC 6 cut(s) 357, 534, 749, 761, 776, 1072
ApeKI GCWGC 3 cut(s) 608, 642, 656
ApoI RAATTY 1 cut(s) 679
Asp700I GAANNNNTTC 1 cut(s) 940
AspLEI GCGC 2 cut(s) 613, 661
AspS9I GGNCC 3 cut(s) 101, 749, 776
AsuC2I CCSGG 4 cut(s) 158, 288, 753, 780
AsuHPI GGTGA 3 cut(s) 542, 589, 794
AsuII TTCGAA 1 cut(s) 343
AvaI CYCGRG 1 cut(s) 1076
AvaII GGWCC 1 cut(s) 101
BanII GRGCYC 2 cut(s) 424, 912
Bbv12I GWGCWC 2 cut(s) 424, 912
BbvI GCAGC 3 cut(s) 595, 643, 654
BccI CCATC 3 cut(s) 623, 821, 842
BceAI ACGGC 2 cut(s) 231, 506
BciT130I CCWGG 1 cut(s) 978
BcnI CCSGG 4 cut(s) 158, 288, 753, 780
BcoDI GTCTC 2 cut(s) 75, 673
BfaI CTAG 5 cut(s) 134, 699, 710, 843, 1044
BfmI CTRYAG 1 cut(s) 593
BisI GCNGC 5 cut(s) 609, 643, 654, 657, 982
BlsI GCNGC 5 cut(s) 610, 644, 655, 658, 983
Bme1390I CCNGG 5 cut(s) 158, 288, 753, 780, 978
Bme18I GGWCC 1 cut(s) 101
BmeT110I CYCGRG 1 cut(s) 1076
BmgT120I GGNCC 3 cut(s) 101, 749, 776
BmiI GGNNCC 4 cut(s) 585, 921, 1041, 1057
BmrFI CCNGG 5 cut(s) 158, 288, 753, 780, 978
BmsI GCATC 1 cut(s) 114
BoxI GACNNNNGTC 1 cut(s) 106
Bpu14I TTCGAA 1 cut(s) 343
BpuMI CCSGG 4 cut(s) 158, 288, 753, 780
BsaBI GATNNNNATC 1 cut(s) 128
BsaI GGTCTC 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 104
BsaWI WCCGGW 1 cut(s) 348
Bsc4I CCNNNNNNNGG 3 cut(s) 163, 355, 559
Bse1I ACTGG 2 cut(s) 500, 923
Bse8I GATNNNNATC 1 cut(s) 128
BseBI CCWGG 1 cut(s) 978
BseDI CCNNGG 1 cut(s) 104
BseGI GGATG 4 cut(s) 129, 172, 634, 748
BseJI GATNNNNATC 1 cut(s) 128
BseLI CCNNNNNNNGG 3 cut(s) 163, 355, 559
BseMII CTCAG 4 cut(s) 626, 711, 729, 1074
BseNI ACTGG 2 cut(s) 500, 923
BseRI GAGGAG 2 cut(s) 477, 662
BseXI GCAGC 3 cut(s) 595, 643, 654
BseYI CCCAGC 1 cut(s) 857
BshFI GGCC 6 cut(s) 359, 536, 751, 763, 778, 1074
BsiHKAI GWGCWC 2 cut(s) 424, 912
BsiHKCI CYCGRG 1 cut(s) 1076
BsiSI CCGG 7 cut(s) 158, 207, 287, 349, 356, 752, 779
BslFI GGGAC 2 cut(s) 829, 874
BslI CCNNNNNNNGG 3 cut(s) 163, 355, 559
BsmAI GTCTC 2 cut(s) 75, 673
BsmFI GGGAC 2 cut(s) 829, 874
BsnI GGCC 6 cut(s) 359, 536, 751, 763, 778, 1074
Bso31I GGTCTC 1 cut(s) 75
BsoBI CYCGRG 1 cut(s) 1076
Bsp119I TTCGAA 1 cut(s) 343
Bsp1286I GDGCHC 2 cut(s) 424, 912
Bsp143I GATC 4 cut(s) 195, 283, 486, 1015
BspACI CCGC 5 cut(s) 90, 137, 653, 928, 981
BspANI GGCC 6 cut(s) 359, 536, 751, 763, 778, 1074
BspCNI CTCAG 4 cut(s) 627, 712, 730, 1075
BspLI GGNNCC 4 cut(s) 585, 921, 1041, 1057
BspMAI CTGCAG 1 cut(s) 597
BspPI GGATC 3 cut(s) 203, 278, 1010
BspT104I TTCGAA 1 cut(s) 343
BspTNI GGTCTC 1 cut(s) 75
BsrI ACTGG 2 cut(s) 500, 923
BssECI CCNNGG 1 cut(s) 104
BssMI GATC 4 cut(s) 195, 283, 486, 1015
Bst2UI CCWGG 1 cut(s) 978
Bst4CI ACNGT 4 cut(s) 105, 119, 530, 1026
Bst6I CTCTTC 3 cut(s) 27, 676, 959
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBI TTCGAA 1 cut(s) 343
BstC8I GCNNGC 1 cut(s) 550
BstDEI CTNAG 5 cut(s) 242, 635, 720, 738, 1083
BstDSI CCRYGG 1 cut(s) 104
BstF5I GGATG 4 cut(s) 129, 172, 634, 748
BstHHI GCGC 2 cut(s) 613, 661
BstKTI GATC 4 cut(s) 198, 286, 489, 1018
BstMAI GTCTC 2 cut(s) 75, 673
BstMBI GATC 4 cut(s) 195, 283, 486, 1015
BstMWI GCNNNNNNNGC 4 cut(s) 518, 554, 592, 880
BstNI CCWGG 1 cut(s) 978
BstPAI GACNNNNGTC 1 cut(s) 106
BstSCI CCNGG 5 cut(s) 156, 286, 751, 778, 976
BstSFI CTRYAG 1 cut(s) 593
BstV1I GCAGC 3 cut(s) 595, 643, 654
BstX2I RGATCY 3 cut(s) 195, 283, 1015
BstYI RGATCY 3 cut(s) 195, 283, 1015
BsuRI GGCC 6 cut(s) 359, 536, 751, 763, 778, 1074
BtgI CCRYGG 1 cut(s) 104
BtsCI GGATG 4 cut(s) 129, 172, 634, 748
BtsIMutI CAGTG 2 cut(s) 507, 930
Cac8I GCNNGC 1 cut(s) 550
CfoI GCGC 2 cut(s) 613, 661
Cfr13I GGNCC 3 cut(s) 101, 749, 776
CspCI CAANNNNNGTGG 2 cut(s) 424, 459
CviAII CATG 3 cut(s) 223, 425, 458
DdeI CTNAG 5 cut(s) 242, 635, 720, 738, 1083
DpnI GATC 4 cut(s) 197, 285, 488, 1017
DpnII GATC 4 cut(s) 195, 283, 486, 1015
EaeI YGGCCR 1 cut(s) 357
Eam1104I CTCTTC 3 cut(s) 27, 676, 959
EarI CTCTTC 3 cut(s) 27, 676, 959
Ecl136II GAGCTC 2 cut(s) 422, 910
Eco147I AGGCCT 2 cut(s) 763, 1074
Eco24I GRGCYC 2 cut(s) 424, 912
Eco31I GGTCTC 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 101
Eco53kI GAGCTC 2 cut(s) 422, 910
Eco57I CTGAAG 3 cut(s) 788, 840, 896
Eco88I CYCGRG 1 cut(s) 1076
EcoICRI GAGCTC 2 cut(s) 422, 910
EcoRII CCWGG 1 cut(s) 976
EcoT38I GRGCYC 2 cut(s) 424, 912
FaeI CATG 3 cut(s) 226, 428, 461
FaiI YATR 6 cut(s) 144, 224, 236, 426, 459, 1037
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 2 cut(s) 829, 874
FatI CATG 3 cut(s) 222, 424, 457
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 5 cut(s) 609, 643, 654, 657, 982
FokI GGATG 4 cut(s) 136, 179, 641, 755
FriOI GRGCYC 2 cut(s) 424, 912
Fsp4HI GCNGC 5 cut(s) 609, 643, 654, 657, 982
FspBI CTAG 5 cut(s) 134, 699, 710, 843, 1044
GlaI GCGC 2 cut(s) 612, 660
GluI GCNGC 5 cut(s) 609, 643, 654, 657, 982
GsaI CCCAGC 1 cut(s) 861
HaeIII GGCC 6 cut(s) 359, 536, 751, 763, 778, 1074
HapII CCGG 7 cut(s) 158, 207, 287, 349, 356, 752, 779
HhaI GCGC 2 cut(s) 613, 661
Hin1II CATG 3 cut(s) 226, 428, 461
Hin6I GCGC 2 cut(s) 611, 659
HinP1I GCGC 2 cut(s) 611, 659
HincII GTYRAC 3 cut(s) 526, 717, 735
HindII GTYRAC 3 cut(s) 526, 717, 735
HpaII CCGG 7 cut(s) 158, 207, 287, 349, 356, 752, 779
HphI GGTGA 3 cut(s) 542, 589, 794
Hpy166II GTNNAC 3 cut(s) 526, 717, 735
Hpy188I TCNGA 7 cut(s) 294, 300, 768, 904, 1020, 1030, 1084
Hpy188III TCNNGA 5 cut(s) 29, 64, 199, 843, 945
Hpy8I GTNNAC 3 cut(s) 526, 717, 735
Hpy99I CGWCG 4 cut(s) 527, 530, 562, 619
HpyAV CCTTC 6 cut(s) 64, 298, 574, 595, 763, 1046
HpyCH4III ACNGT 4 cut(s) 105, 119, 530, 1026
HpyCH4IV ACGT 1 cut(s) 339
HpyCH4V TGCA 3 cut(s) 435, 595, 1064
HpyF10VI GCNNNNNNNGC 4 cut(s) 518, 554, 592, 880
HpyF3I CTNAG 5 cut(s) 242, 635, 720, 738, 1083
HpySE526I ACGT 1 cut(s) 339
Hsp92II CATG 3 cut(s) 226, 428, 461
HspAI GCGC 2 cut(s) 611, 659
Kzo9I GATC 4 cut(s) 195, 283, 486, 1015
LmnI GCTCC 3 cut(s) 583, 1045, 1055
Lsp1109I GCAGC 3 cut(s) 595, 643, 654
LweI GCATC 1 cut(s) 114
MaeI CTAG 5 cut(s) 134, 699, 710, 843, 1044
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 3 cut(s) 473, 782, 989
MalI GATC 4 cut(s) 197, 285, 488, 1017
MboI GATC 4 cut(s) 195, 283, 486, 1015
MboII GAAGA 5 cut(s) 44, 322, 663, 889, 976
MflI RGATCY 3 cut(s) 195, 283, 1015
MhlI GDGCHC 2 cut(s) 424, 912
MluCI AATT 2 cut(s) 59, 679
MlyI GAGTC 4 cut(s) 204, 583, 779, 1088
MmeI TCCRAC 3 cut(s) 381, 603, 1008
MroXI GAANNNNTTC 1 cut(s) 940
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 2 cut(s) 92, 857
MspI CCGG 7 cut(s) 158, 207, 287, 349, 356, 752, 779
MspR9I CCNGG 5 cut(s) 158, 288, 753, 780, 978
MvaI CCWGG 1 cut(s) 978
MwoI GCNNNNNNNGC 4 cut(s) 518, 554, 592, 880
NciI CCSGG 4 cut(s) 158, 288, 753, 780
NdeII GATC 4 cut(s) 195, 283, 486, 1015
NlaIII CATG 3 cut(s) 226, 428, 461
NlaIV GGNNCC 4 cut(s) 585, 921, 1041, 1057
NmeAIII GCCGAG 2 cut(s) 562, 578
NmuCI GTSAC 2 cut(s) 473, 782
NspV TTCGAA 1 cut(s) 343
PaeR7I CTCGAG 1 cut(s) 1076
PceI AGGCCT 2 cut(s) 763, 1074
PcsI WCGNNNNNNNCGW 1 cut(s) 534
PdmI GAANNNNTTC 1 cut(s) 940
PfeI GAWTC 7 cut(s) 5, 38, 178, 295, 313, 352, 1031
PkrI GCNGC 5 cut(s) 610, 644, 655, 658, 983
PleI GAGTC 4 cut(s) 204, 583, 779, 1087
PpsI GAGTC 4 cut(s) 204, 583, 779, 1087
PshAI GACNNNNGTC 1 cut(s) 106
Psp124BI GAGCTC 2 cut(s) 424, 912
Psp6I CCWGG 1 cut(s) 976
PspFI CCCAGC 1 cut(s) 857
PspGI CCWGG 1 cut(s) 976
PspN4I GGNNCC 4 cut(s) 585, 921, 1041, 1057
PspPI GGNCC 3 cut(s) 101, 749, 776
PspXI VCTCGAGB 1 cut(s) 1076
PstI CTGCAG 1 cut(s) 597
PsuI RGATCY 3 cut(s) 195, 283, 1015
PvuII CAGCTG 1 cut(s) 857
SacI GAGCTC 2 cut(s) 424, 912
SalI GTCGAC 1 cut(s) 524
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 5 cut(s) 609, 643, 654, 657, 982
Sau3AI GATC 4 cut(s) 195, 283, 486, 1015
Sau96I GGNCC 3 cut(s) 101, 749, 776
SchI GAGTC 4 cut(s) 204, 583, 779, 1088
ScrFI CCNGG 5 cut(s) 158, 288, 753, 780, 978
SduI GDGCHC 2 cut(s) 424, 912
SfaNI GCATC 1 cut(s) 114
SfcI CTRYAG 1 cut(s) 593
Sfr274I CTCGAG 1 cut(s) 1076
SfuI TTCGAA 1 cut(s) 343
SgrDI CGTCGACG 1 cut(s) 524
SinI GGWCC 1 cut(s) 101
SlaI CTCGAG 1 cut(s) 1076
SmlI CTYRAG 1 cut(s) 1076
SmoI CTYRAG 1 cut(s) 1076
Sse9I AATT 2 cut(s) 59, 679
SseBI AGGCCT 2 cut(s) 763, 1074
SsiI CCGC 5 cut(s) 90, 137, 653, 928, 981
SspMI CTAG 5 cut(s) 134, 699, 710, 843, 1044
SstI GAGCTC 2 cut(s) 424, 912
StuI AGGCCT 2 cut(s) 763, 1074
StyD4I CCNGG 5 cut(s) 156, 286, 751, 778, 976
TaaI ACNGT 4 cut(s) 105, 119, 530, 1026
TaiI ACGT 1 cut(s) 342
TaqI TCGA 5 cut(s) 200, 343, 525, 946, 1077
TaqII GACCGA 1 cut(s) 99
TasI AATT 2 cut(s) 59, 679
TauI GCSGC 2 cut(s) 656, 984
TfiI GAWTC 7 cut(s) 5, 38, 178, 295, 313, 352, 1031
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 2 cut(s) 507, 930
TseFI GTSAC 2 cut(s) 473, 782
TseI GCWGC 3 cut(s) 608, 642, 656
Tsp45I GTSAC 2 cut(s) 473, 782
TspDTI ATGAA 1 cut(s) 614
TspGWI ACGGA 2 cut(s) 203, 575
TspRI CASTG 2 cut(s) 507, 930
VpaK11BI GGWCC 1 cut(s) 101
XapI RAATTY 1 cut(s) 679
XbaI TCTAGA 1 cut(s) 842
XhoI CTCGAG 1 cut(s) 1076
XmiI GTMKAC 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 940
XspI CTAG 5 cut(s) 134, 699, 710, 843, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.