Rmu_sc0001350.1_g000029

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001350.1
OG0000123
Physical Location & Seq
Reverse (-)
165067 .. 166324
1258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001350.1_g000029.1.cds

Sequence Viewer

Length: 1086 bp
atggcggaggagaacacaatggctccttctgcacattatgaggaggccattgtgagccttgttggaggagaggatgcaatccatgattcattcttctacctttgtggtcggcttttatccaagaagacaatggtgatcccgtcattctcggcggcgatctccaacgtttggggtttgaaggagagagttctgatccagcaggaggaggaggatatctttgtcttccaattcaaggatagtgaggtgaagaataggattctctcaagcggtctatggttctacagcaactctatgctgctgctagcagactatgacggagtttcagatctcagggtggctcagctgcatctcttggaggtttgggtggcggtgaaggggttgcgcattgctatgtgcaacgagaaggccttaaccctaattggacgagcgttgggatgttcggtggaggatttggcatggcggacctttcaattctctccaacggtctacgtgttggtggaactccattatgaaaaatgtcatgggatgtgtgtgacttgtggctttttcggtcatggtgggggtatatgtgatggcagattggaggcggaggcgcgcgctgcgctggctctagcggtggaagcaaacccaagtgggtgggcggcgtcggaagtggcggtttctgagttagagatgctggtgacggtgggactaggtgcgccagaggtttctggggttgcggaagtggctggaacgctggtgctaggattagcttggccttgggcgggggatgtatgggactggccggactactttgctaatggggccaatataaatggccttgctgttgggctaacttcagaaaaacatgttaccttcggtgtgaaaaagaagagttttaagcctaggttggatttcatacctccggaatttcaccttggtgagttggtggaggttccgatttcgctagggacagctccaaagaaaaaaggcagtcctgttggacgaaggaataagcatactttgaggaatgagaaagatgaaggtaacaatgatggtgtagatatcagctccaactcgccagggaaggagctggctattgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

361

Amino Acids

39.26

Weight (kDa)

5.15

Isoelectric Point (pI)

33.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 383
AccB7I CCANNNNNTGG 1 cut(s) 168
AccI GTMKAC 1 cut(s) 486
AccII CGCG 2 cut(s) 595, 597
AccIII TCCGGA 1 cut(s) 904
AclI AACGTT 1 cut(s) 165
AclWI GGATC 2 cut(s) 130, 187
AcoI YGGCCR 1 cut(s) 782
AcsI RAATTY 1 cut(s) 908
AcuI CTGAAG 1 cut(s) 822
AcyI GRCGYC 1 cut(s) 644
AfiI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 764
AflIII ACRYGT 2 cut(s) 489, 847
AgsI TTSAA 3 cut(s) 178, 232, 470
AjnI CCWGG 1 cut(s) 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 900, 932
AleI CACNNNNGTG 1 cut(s) 918
AluBI AGCT 5 cut(s) 343, 752, 956, 1050, 1072
AluI AGCT 5 cut(s) 343, 752, 956, 1050, 1072
AlwI GGATC 2 cut(s) 130, 187
Aor13HI TCCGGA 1 cut(s) 904
AoxI GGCC 6 cut(s) 45, 405, 755, 782, 804, 817
ApeKI GCWGC 4 cut(s) 295, 298, 343, 599
ApoI RAATTY 1 cut(s) 908
AspA2I CCTAGG 1 cut(s) 884
AspLEI GCGC 6 cut(s) 384, 595, 597, 599, 604, 700
AspS9I GGNCC 2 cut(s) 462, 804
AsuHPI GGTGA 6 cut(s) 145, 256, 382, 691, 905, 932
AsuNHI GCTAGC 1 cut(s) 301
AvaII GGWCC 1 cut(s) 462
AvrII CCTAGG 1 cut(s) 884
BbsI GAAGAC 2 cut(s) 131, 214
BbvI GCAGC 4 cut(s) 282, 285, 330, 586
BccI CCATC 2 cut(s) 566, 1028
BciT130I CCWGG 1 cut(s) 1062
BfaI CTAG 6 cut(s) 302, 611, 692, 743, 885, 947
BfmI CTRYAG 1 cut(s) 280
BglII AGATCT 1 cut(s) 325
BisI GCNGC 6 cut(s) 153, 296, 299, 344, 600, 642
BlnI CCTAGG 1 cut(s) 884
BlpI GCTNAGC 1 cut(s) 339
BlsI GCNGC 6 cut(s) 154, 297, 300, 345, 601, 643
Bme1390I CCNGG 1 cut(s) 1062
Bme18I GGWCC 1 cut(s) 462
BmgT120I GGNCC 2 cut(s) 462, 804
BmiI GGNNCC 3 cut(s) 24, 805, 936
BmrFI CCNGG 1 cut(s) 1062
BmsI GCATC 3 cut(s) 64, 355, 663
BmtI GCTAGC 1 cut(s) 305
BpiI GAAGAC 2 cut(s) 131, 214
Bpu1102I GCTNAGC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 247
BsaAI YACGTR 1 cut(s) 490
BsaHI GRCGYC 1 cut(s) 644
BsaJI CCNNGG 4 cut(s) 758, 884, 916, 1061
BsaWI WCCGGW 1 cut(s) 904
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 4 cut(s) 168, 202, 232, 764
Bse1I ACTGG 1 cut(s) 785
Bse3DI GCAATG 1 cut(s) 384
BseAI TCCGGA 1 cut(s) 904
BseBI CCWGG 1 cut(s) 1062
BseDI CCNNGG 4 cut(s) 758, 884, 916, 1061
BseGI GGATG 4 cut(s) 79, 440, 531, 775
BseLI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 764
BseMI GCAATG 1 cut(s) 384
BseMII CTCAG 3 cut(s) 343, 353, 654
BseNI ACTGG 1 cut(s) 785
BsePI GCGCGC 2 cut(s) 593, 595
BseRI GAGGAG 5 cut(s) 23, 56, 81, 218, 221
BseXI GCAGC 4 cut(s) 282, 285, 330, 586
BsgI GTGCAG 1 cut(s) 15
Bsh1236I CGCG 2 cut(s) 595, 597
BshFI GGCC 6 cut(s) 47, 407, 757, 784, 806, 819
BsiSI CCGG 2 cut(s) 785, 905
BslFI GGGAC 3 cut(s) 702, 791, 964
BslI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 764
BsmFI GGGAC 3 cut(s) 702, 791, 964
BsnI GGCC 6 cut(s) 47, 407, 757, 784, 806, 819
Bsp13I TCCGGA 1 cut(s) 904
Bsp143I GATC 4 cut(s) 135, 156, 192, 325
Bsp1720I GCTNAGC 1 cut(s) 339
BspANI GGCC 6 cut(s) 47, 407, 757, 784, 806, 819
BspCNI CTCAG 3 cut(s) 342, 352, 655
BspEI TCCGGA 1 cut(s) 904
BspFNI CGCG 2 cut(s) 595, 597
BspLI GGNNCC 3 cut(s) 24, 805, 936
BspOI GCTAGC 1 cut(s) 305
BspPI GGATC 2 cut(s) 130, 187
BsrDI GCAATG 1 cut(s) 384
BsrI ACTGG 1 cut(s) 785
BssECI CCNNGG 4 cut(s) 758, 884, 916, 1061
BssHII GCGCGC 2 cut(s) 593, 595
BssMI GATC 4 cut(s) 135, 156, 192, 325
BssNI GRCGYC 1 cut(s) 644
BssT1I CCWWGG 3 cut(s) 758, 884, 916
Bst2UI CCWGG 1 cut(s) 1062
Bst4CI ACNGT 2 cut(s) 484, 685
Bst6I CTCTTC 1 cut(s) 866
BstACI GRCGYC 1 cut(s) 644
BstBAI YACGTR 1 cut(s) 490
BstC8I GCNNGC 5 cut(s) 303, 595, 597, 606, 1074
BstDEI CTNAG 3 cut(s) 329, 339, 663
BstF5I GGATG 4 cut(s) 79, 440, 531, 775
BstFNI CGCG 2 cut(s) 595, 597
BstHHI GCGC 6 cut(s) 384, 595, 597, 599, 604, 700
BstKTI GATC 4 cut(s) 138, 159, 195, 328
BstMBI GATC 4 cut(s) 135, 156, 192, 325
BstMWI GCNNNNNNNGC 7 cut(s) 29, 599, 601, 605, 620, 725, 803
BstNI CCWGG 1 cut(s) 1062
BstNSI RCATGY 1 cut(s) 851
BstSCI CCNGG 1 cut(s) 1060
BstSFI CTRYAG 1 cut(s) 280
BstUI CGCG 2 cut(s) 595, 597
BstV1I GCAGC 4 cut(s) 282, 285, 330, 586
BstV2I GAAGAC 2 cut(s) 131, 214
BstX2I RGATCY 1 cut(s) 325
BstXI CCANNNNNNTGG 1 cut(s) 636
BstYI RGATCY 1 cut(s) 325
BsuRI GGCC 6 cut(s) 47, 407, 757, 784, 806, 819
BtsCI GGATG 4 cut(s) 79, 440, 531, 775
Cac8I GCNNGC 5 cut(s) 303, 595, 597, 606, 1074
CfoI GCGC 6 cut(s) 384, 595, 597, 599, 604, 700
Cfr13I GGNCC 2 cut(s) 462, 804
CseI GACGC 1 cut(s) 633
CviAII CATG 5 cut(s) 83, 456, 521, 554, 848
DdeI CTNAG 3 cut(s) 329, 339, 663
DpnI GATC 4 cut(s) 137, 158, 194, 327
DpnII GATC 4 cut(s) 135, 156, 192, 325
EaeI YGGCCR 1 cut(s) 782
Eam1104I CTCTTC 1 cut(s) 866
EarI CTCTTC 1 cut(s) 866
EciI GGCGGA 3 cut(s) 20, 475, 602
Eco130I CCWWGG 3 cut(s) 758, 884, 916
Eco147I AGGCCT 1 cut(s) 407
Eco32I GATATC 2 cut(s) 214, 1045
Eco47I GGWCC 1 cut(s) 462
Eco57I CTGAAG 1 cut(s) 822
EcoRII CCWGG 1 cut(s) 1060
EcoRV GATATC 2 cut(s) 214, 1045
EcoT14I CCWWGG 3 cut(s) 758, 884, 916
ErhI CCWWGG 3 cut(s) 758, 884, 916
FaeI CATG 5 cut(s) 86, 459, 524, 557, 851
FaqI GGGAC 3 cut(s) 702, 791, 964
FatI CATG 5 cut(s) 82, 455, 520, 553, 847
FauI CCCGC 1 cut(s) 757
FblI GTMKAC 1 cut(s) 486
Fnu4HI GCNGC 6 cut(s) 153, 296, 299, 344, 600, 642
FokI GGATG 4 cut(s) 86, 447, 538, 782
Fsp4HI GCNGC 6 cut(s) 153, 296, 299, 344, 600, 642
FspBI CTAG 6 cut(s) 302, 611, 692, 743, 885, 947
FspI TGCGCA 1 cut(s) 383
GlaI GCGC 6 cut(s) 383, 594, 596, 598, 603, 699
GluI GCNGC 6 cut(s) 153, 296, 299, 344, 600, 642
HaeIII GGCC 6 cut(s) 47, 407, 757, 784, 806, 819
HapII CCGG 2 cut(s) 785, 905
HgaI GACGC 1 cut(s) 633
HhaI GCGC 6 cut(s) 384, 595, 597, 599, 604, 700
Hin1I GRCGYC 1 cut(s) 644
Hin1II CATG 5 cut(s) 86, 459, 524, 557, 851
Hin6I GCGC 6 cut(s) 382, 593, 595, 597, 602, 698
HinP1I GCGC 6 cut(s) 382, 593, 595, 597, 602, 698
HinfI GANTC 2 cut(s) 86, 256
HpaII CCGG 2 cut(s) 785, 905
HphI GGTGA 6 cut(s) 145, 256, 382, 691, 905, 932
Hpy166II GTNNAC 1 cut(s) 487
Hpy188I TCNGA 6 cut(s) 192, 325, 649, 664, 841, 939
Hpy188III TCNNGA 1 cut(s) 905
Hpy8I GTNNAC 1 cut(s) 487
Hpy99I CGWCG 1 cut(s) 649
HpyAV CCTTC 8 cut(s) 36, 172, 367, 397, 865, 981, 1016, 1060
HpyCH4III ACNGT 2 cut(s) 484, 685
HpyCH4IV ACGT 2 cut(s) 165, 489
HpyCH4V TGCA 4 cut(s) 32, 77, 346, 396
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 599, 601, 605, 620, 725, 803
HpyF3I CTNAG 3 cut(s) 329, 339, 663
HpySE526I ACGT 2 cut(s) 165, 489
Hsp92I GRCGYC 1 cut(s) 644
Hsp92II CATG 5 cut(s) 86, 459, 524, 557, 851
HspAI GCGC 6 cut(s) 382, 593, 595, 597, 602, 698
Kpn2I TCCGGA 1 cut(s) 904
Kzo9I GATC 4 cut(s) 135, 156, 192, 325
LmnI GCTCC 4 cut(s) 28, 961, 1055, 1069
Lsp1109I GCAGC 4 cut(s) 282, 285, 330, 586
LweI GCATC 3 cut(s) 64, 355, 663
MaeI CTAG 6 cut(s) 302, 611, 692, 743, 885, 947
MaeII ACGT 2 cut(s) 165, 489
MaeIII GTNAC 4 cut(s) 532, 679, 850, 1025
MalI GATC 4 cut(s) 137, 158, 194, 327
MboI GATC 4 cut(s) 135, 156, 192, 325
MboII GAAGA 5 cut(s) 85, 136, 214, 259, 883
MflI RGATCY 1 cut(s) 325
MluCI AATT 4 cut(s) 227, 417, 470, 908
MmeI TCCRAC 7 cut(s) 43, 186, 503, 627, 870, 961, 1077
MroI TCCGGA 1 cut(s) 904
MseI TTAA 3 cut(s) 410, 879, 1084
MslI CAYNNNNRTG 2 cut(s) 389, 918
MspA1I CMGCKG 1 cut(s) 343
MspI CCGG 2 cut(s) 785, 905
MspR9I CCNGG 1 cut(s) 1062
MteI GCGCNGCGC 1 cut(s) 600
MvaI CCWGG 1 cut(s) 1062
MvnI CGCG 2 cut(s) 595, 597
MwoI GCNNNNNNNGC 7 cut(s) 29, 599, 601, 605, 620, 725, 803
NdeII GATC 4 cut(s) 135, 156, 192, 325
NheI GCTAGC 1 cut(s) 301
NlaIII CATG 5 cut(s) 86, 459, 524, 557, 851
NlaIV GGNNCC 3 cut(s) 24, 805, 936
NmeAIII GCCGAG 1 cut(s) 128
NmuCI GTSAC 2 cut(s) 532, 679
NsbI TGCGCA 1 cut(s) 383
NspI RCATGY 1 cut(s) 851
OliI CACNNNNGTG 1 cut(s) 918
PauI GCGCGC 2 cut(s) 593, 595
PceI AGGCCT 1 cut(s) 407
PciI ACATGT 1 cut(s) 847
PfeI GAWTC 2 cut(s) 86, 256
PflMI CCANNNNNTGG 1 cut(s) 168
PkrI GCNGC 6 cut(s) 154, 297, 300, 345, 601, 643
Ppu21I YACGTR 1 cut(s) 490
PscI ACATGT 1 cut(s) 847
Psp1406I AACGTT 1 cut(s) 165
Psp6I CCWGG 1 cut(s) 1060
PspGI CCWGG 1 cut(s) 1060
PspN4I GGNNCC 3 cut(s) 24, 805, 936
PspPI GGNCC 2 cut(s) 462, 804
PsuI RGATCY 1 cut(s) 325
PteI GCGCGC 2 cut(s) 593, 595
PvuII CAGCTG 1 cut(s) 343
RseI CAYNNNNRTG 2 cut(s) 389, 918
SaqAI TTAA 3 cut(s) 410, 879, 1084
SatI GCNGC 6 cut(s) 153, 296, 299, 344, 600, 642
Sau3AI GATC 4 cut(s) 135, 156, 192, 325
Sau96I GGNCC 2 cut(s) 462, 804
ScrFI CCNGG 1 cut(s) 1062
SfaNI GCATC 3 cut(s) 64, 355, 663
SfcI CTRYAG 1 cut(s) 280
SinI GGWCC 1 cut(s) 462
SmiMI CAYNNNNRTG 2 cut(s) 389, 918
SmlI CTYRAG 1 cut(s) 262
SmoI CTYRAG 1 cut(s) 262
Sse9I AATT 4 cut(s) 227, 417, 470, 908
SseBI AGGCCT 1 cut(s) 407
SspMI CTAG 6 cut(s) 302, 611, 692, 743, 885, 947
StuI AGGCCT 1 cut(s) 407
StyD4I CCNGG 1 cut(s) 1060
StyI CCWWGG 3 cut(s) 758, 884, 916
TaaI ACNGT 2 cut(s) 484, 685
TaiI ACGT 2 cut(s) 168, 492
TaqII GACCGA 1 cut(s) 539
TasI AATT 4 cut(s) 227, 417, 470, 908
TauI GCSGC 2 cut(s) 155, 644
TfiI GAWTC 2 cut(s) 86, 256
Tru1I TTAA 3 cut(s) 410, 879, 1084
Tru9I TTAA 3 cut(s) 410, 879, 1084
TseFI GTSAC 2 cut(s) 532, 679
TseI GCWGC 4 cut(s) 295, 298, 343, 599
Tsp45I GTSAC 2 cut(s) 532, 679
TspDTI ATGAA 4 cut(s) 78, 525, 886, 1035
TspGWI ACGGA 1 cut(s) 330
Van91I CCANNNNNTGG 1 cut(s) 168
VpaK11BI GGWCC 1 cut(s) 462
XapI RAATTY 1 cut(s) 908
XceI RCATGY 1 cut(s) 851
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XmaJI CCTAGG 1 cut(s) 884
XmiI GTMKAC 1 cut(s) 486
XspI CTAG 6 cut(s) 302, 611, 692, 743, 885, 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.