Rmu_sc0024149.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024149.1
OG0000123
Physical Location & Seq
Reverse (-)
1222 .. 2104
883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024149.1_g000002.1.cds

Sequence Viewer

Length: 813 bp
atggtggaggagaatgtggctcctcctgcaccttttgagaaggcttttgtgagccttgttggaggagaatatgcaattcacgattcgtttttatacctttgtggccaactgttgtctaataaggcgatggtgctcccatcattcttgacggcgatctccaacgtgtgggggctaagggagagagttttgatcctacaggaggaggacgacgtatttaacaattccatgttgctgctggccaactatgacgacgtttctaatctcaaggcggctccgctgcacctccttaagatatgggtggcggtgaggggtttgcgcattgctatgcataatgagaaggctttaactctgatcgaacgagcgttggggaccttcgttctgattgatcagggggtggtgcagcggaaggaccaggttcagagggtccgtgtgatgcaagatgttcgtcggaggatctgggcaagatgggtgtttgatttttcaccggctgtgtcagtgttggttgagctccagtacgagaagcgtcatggtctctgtgttgcatgtggtttcttcgggcatggaggaggtgtgtgtgttaggaggttggagatggagacgctgccgctagcagtgtcaggctgtgaaggttcgaactgtgtggggctgagttcggtgccaggttcgctgacatctatggctgcagtgggaggtctagggatgtcccatgaggcgtggaaggggccaacggtgctggaaatggctaaactggctatgaaggcgggcctgggatcgatgtctgctggaagtgcaacacgggctcttctgggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

270

Amino Acids

29.36

Weight (kDa)

7.65

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 317
AccB1I GGYRCC 1 cut(s) 655
AccB7I CCANNNNNTGG 1 cut(s) 165
AciI CCGC 6 cut(s) 269, 275, 302, 403, 605, 761
AclWI GGATC 3 cut(s) 184, 461, 778
AcoI YGGCCR 2 cut(s) 103, 237
AfaI GTAC 1 cut(s) 515
AfiI CCNNNNNNNGG 2 cut(s) 165, 199
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 162
AjnI CCWGG 3 cut(s) 411, 658, 765
AluBI AGCT 1 cut(s) 508
AluI AGCT 1 cut(s) 508
Alw21I GWGCWC 2 cut(s) 135, 510
Alw26I GTCTC 2 cut(s) 536, 590
AlwI GGATC 3 cut(s) 184, 461, 778
AoxI GGCC 4 cut(s) 103, 237, 722, 763
ApeKI GCWGC 5 cut(s) 232, 277, 400, 601, 680
AspLEI GCGC 1 cut(s) 318
AspS9I GGNCC 5 cut(s) 369, 409, 424, 722, 763
AsuHPI GGTGA 2 cut(s) 316, 474
AsuII TTCGAA 1 cut(s) 632
AsuNHI GCTAGC 1 cut(s) 607
AvaII GGWCC 3 cut(s) 369, 409, 424
BalI TGGCCA 2 cut(s) 105, 239
BanI GGYRCC 1 cut(s) 655
BanII GRGCYC 2 cut(s) 510, 802
Bbv12I GWGCWC 2 cut(s) 135, 510
BbvI GCAGC 5 cut(s) 219, 264, 412, 588, 667
BccI CCATC 4 cut(s) 121, 145, 459, 586
BceAI ACGGC 1 cut(s) 165
BcgI CGANNNNNNTGC 2 cut(s) 425, 459
BciT130I CCWGG 3 cut(s) 413, 660, 767
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 2 cut(s) 536, 590
BfaI CTAG 2 cut(s) 608, 695
BfmI CTRYAG 2 cut(s) 194, 681
BfrI CTTAAG 1 cut(s) 287
BisI GCNGC 7 cut(s) 233, 270, 278, 401, 602, 605, 681
BlsI GCNGC 7 cut(s) 234, 271, 279, 402, 603, 606, 682
Bme1390I CCNGG 3 cut(s) 413, 660, 767
Bme18I GGWCC 3 cut(s) 369, 409, 424
BmgT120I GGNCC 5 cut(s) 369, 409, 424, 722, 763
BmiI GGNNCC 6 cut(s) 21, 273, 370, 425, 657, 723
BmrFI CCNGG 3 cut(s) 413, 660, 767
BmsI GCATC 1 cut(s) 423
BmtI GCTAGC 1 cut(s) 611
BpmI CTGGAG 1 cut(s) 494
Bpu10I CCTNAGC 1 cut(s) 173
Bpu14I TTCGAA 1 cut(s) 632
BpuEI CTTGAG 1 cut(s) 248
Bsa29I ATCGAT 1 cut(s) 773
BsaI GGTCTC 1 cut(s) 536
BsaJI CCNNGG 1 cut(s) 766
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 199
Bse118I RCCGGY 1 cut(s) 484
Bse1I ACTGG 2 cut(s) 511, 753
Bse3DI GCAATG 1 cut(s) 318
BseBI CCWGG 3 cut(s) 413, 660, 767
BseCI ATCGAT 1 cut(s) 773
BseDI CCNNGG 1 cut(s) 766
BseGI GGATG 1 cut(s) 705
BseLI CCNNNNNNNGG 2 cut(s) 165, 199
BseMI GCAATG 1 cut(s) 318
BseMII CTCAG 1 cut(s) 638
BseNI ACTGG 2 cut(s) 511, 753
BseRI GAGGAG 5 cut(s) 12, 23, 78, 215, 579
BseXI GCAGC 5 cut(s) 219, 264, 412, 588, 667
BsgI GTGCAG 3 cut(s) 12, 263, 419
BshFI GGCC 4 cut(s) 105, 239, 724, 765
BshNI GGYRCC 1 cut(s) 655
BshVI ATCGAT 1 cut(s) 773
BsiHKAI GWGCWC 2 cut(s) 135, 510
BsiSI CCGG 1 cut(s) 485
BslFI GGGAC 2 cut(s) 382, 688
BslI CCNNNNNNNGG 2 cut(s) 165, 199
BsmAI GTCTC 2 cut(s) 536, 590
BsmBI CGTCTC 1 cut(s) 590
BsmFI GGGAC 2 cut(s) 382, 688
BsnI GGCC 4 cut(s) 105, 239, 724, 765
Bso31I GGTCTC 1 cut(s) 536
Bsp119I TTCGAA 1 cut(s) 632
Bsp1286I GDGCHC 3 cut(s) 135, 510, 802
Bsp143I GATC 6 cut(s) 153, 189, 351, 385, 453, 770
BspACI CCGC 6 cut(s) 269, 275, 302, 403, 605, 761
BspANI GGCC 4 cut(s) 105, 239, 724, 765
BspCNI CTCAG 1 cut(s) 639
BspDI ATCGAT 1 cut(s) 773
BspLI GGNNCC 6 cut(s) 21, 273, 370, 425, 657, 723
BspMAI CTGCAG 1 cut(s) 685
BspOI GCTAGC 1 cut(s) 611
BspPI GGATC 3 cut(s) 184, 461, 778
BspQI GCTCTTC 1 cut(s) 807
BspT104I TTCGAA 1 cut(s) 632
BspT107I GGYRCC 1 cut(s) 655
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 536
BsrDI GCAATG 1 cut(s) 318
BsrFI RCCGGY 1 cut(s) 484
BsrI ACTGG 2 cut(s) 511, 753
BssAI RCCGGY 1 cut(s) 484
BssECI CCNNGG 1 cut(s) 766
BssMI GATC 6 cut(s) 153, 189, 351, 385, 453, 770
Bst2UI CCWGG 3 cut(s) 413, 660, 767
Bst4CI ACNGT 3 cut(s) 111, 638, 730
Bst6I CTCTTC 1 cut(s) 807
BstAFI CTTAAG 1 cut(s) 287
BstBI TTCGAA 1 cut(s) 632
BstC8I GCNNGC 3 cut(s) 237, 609, 763
BstDEI CTNAG 2 cut(s) 173, 647
BstENI CCTNNNNNAGG 1 cut(s) 197
BstF5I GGATG 1 cut(s) 705
BstHHI GCGC 1 cut(s) 318
BstKTI GATC 6 cut(s) 156, 192, 354, 388, 456, 773
BstMAI GTCTC 2 cut(s) 536, 590
BstMBI GATC 6 cut(s) 153, 189, 351, 385, 453, 770
BstMWI GCNNNNNNNGC 7 cut(s) 26, 664, 730, 749, 758, 788, 797
BstNI CCWGG 3 cut(s) 413, 660, 767
BstNSI RCATGY 1 cut(s) 546
BstSCI CCNGG 3 cut(s) 411, 658, 765
BstSFI CTRYAG 2 cut(s) 194, 681
BstV1I GCAGC 5 cut(s) 219, 264, 412, 588, 667
BstX2I RGATCY 1 cut(s) 453
BstYI RGATCY 1 cut(s) 453
Bsu15I ATCGAT 1 cut(s) 773
BsuRI GGCC 4 cut(s) 105, 239, 724, 765
BsuTUI ATCGAT 1 cut(s) 773
BtgZI GCGATG 1 cut(s) 140
BtsCI GGATG 1 cut(s) 705
BtsI GCAGTG 2 cut(s) 618, 690
BtsIMutI CAGTG 3 cut(s) 501, 618, 690
Cac8I GCNNGC 3 cut(s) 237, 609, 763
CfoI GCGC 1 cut(s) 318
Cfr10I RCCGGY 1 cut(s) 484
Cfr13I GGNCC 5 cut(s) 369, 409, 424, 722, 763
ClaI ATCGAT 1 cut(s) 773
CseI GACGC 2 cut(s) 512, 607
CsiI ACCWGGT 1 cut(s) 411
Csp6I GTAC 1 cut(s) 514
CviAII CATG 5 cut(s) 226, 527, 543, 560, 707
CviQI GTAC 1 cut(s) 514
DdeI CTNAG 2 cut(s) 173, 647
DpnI GATC 6 cut(s) 155, 191, 353, 387, 455, 772
DpnII GATC 6 cut(s) 153, 189, 351, 385, 453, 770
EaeI YGGCCR 2 cut(s) 103, 237
Eam1104I CTCTTC 1 cut(s) 807
EarI CTCTTC 1 cut(s) 807
Ecl136II GAGCTC 1 cut(s) 508
Eco24I GRGCYC 2 cut(s) 510, 802
Eco31I GGTCTC 1 cut(s) 536
Eco47I GGWCC 3 cut(s) 369, 409, 424
Eco53kI GAGCTC 1 cut(s) 508
EcoICRI GAGCTC 1 cut(s) 508
EcoNI CCTNNNNNAGG 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 369
EcoRII CCWGG 3 cut(s) 411, 658, 765
EcoT22I ATGCAT 1 cut(s) 330
EcoT38I GRGCYC 2 cut(s) 510, 802
Esp3I CGTCTC 1 cut(s) 590
FaeI CATG 5 cut(s) 229, 530, 546, 563, 710
FaqI GGGAC 2 cut(s) 382, 688
FatI CATG 5 cut(s) 225, 526, 542, 559, 706
FauI CCCGC 1 cut(s) 754
FbaI TGATCA 1 cut(s) 385
Fnu4HI GCNGC 7 cut(s) 233, 270, 278, 401, 602, 605, 681
FokI GGATG 1 cut(s) 712
FriOI GRGCYC 2 cut(s) 510, 802
Fsp4HI GCNGC 7 cut(s) 233, 270, 278, 401, 602, 605, 681
FspBI CTAG 2 cut(s) 608, 695
FspI TGCGCA 1 cut(s) 317
GlaI GCGC 1 cut(s) 317
GluI GCNGC 7 cut(s) 233, 270, 278, 401, 602, 605, 681
GsuI CTGGAG 1 cut(s) 494
HaeIII GGCC 4 cut(s) 105, 239, 724, 765
HapII CCGG 1 cut(s) 485
HgaI GACGC 2 cut(s) 512, 607
HhaI GCGC 1 cut(s) 318
Hin1II CATG 5 cut(s) 229, 530, 546, 563, 710
Hin6I GCGC 1 cut(s) 316
HinP1I GCGC 1 cut(s) 316
HinfI GANTC 1 cut(s) 83
HpaII CCGG 1 cut(s) 485
HphI GGTGA 2 cut(s) 316, 474
Hpy188I TCNGA 4 cut(s) 351, 381, 420, 450
Hpy188III TCNNGA 2 cut(s) 80, 145
Hpy99I CGWCG 3 cut(s) 212, 254, 450
HpyAV CCTTC 7 cut(s) 34, 331, 382, 400, 620, 712, 751
HpyCH4III ACNGT 3 cut(s) 111, 638, 730
HpyCH4IV ACGT 3 cut(s) 162, 210, 252
HpyCH4V TGCA 9 cut(s) 29, 74, 280, 328, 400, 436, 542, 683, 791
HpyF10VI GCNNNNNNNGC 7 cut(s) 26, 664, 730, 749, 758, 788, 797
HpyF3I CTNAG 2 cut(s) 173, 647
HpySE526I ACGT 3 cut(s) 162, 210, 252
Hsp92II CATG 5 cut(s) 229, 530, 546, 563, 710
HspAI GCGC 1 cut(s) 316
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 6 cut(s) 153, 189, 351, 385, 453, 770
LguI GCTCTTC 1 cut(s) 807
LmnI GCTCC 4 cut(s) 25, 138, 277, 513
Lsp1109I GCAGC 5 cut(s) 219, 264, 412, 588, 667
LweI GCATC 1 cut(s) 423
MabI ACCWGGT 1 cut(s) 411
MaeI CTAG 2 cut(s) 608, 695
MaeII ACGT 3 cut(s) 162, 210, 252
MalI GATC 6 cut(s) 155, 191, 353, 387, 455, 772
MboI GATC 6 cut(s) 153, 189, 351, 385, 453, 770
MboII GAAGA 2 cut(s) 544, 794
MflI RGATCY 1 cut(s) 453
MhlI GDGCHC 3 cut(s) 135, 510, 802
MlsI TGGCCA 2 cut(s) 105, 239
MluCI AATT 2 cut(s) 75, 220
MluNI TGGCCA 2 cut(s) 105, 239
MmeI TCCRAC 4 cut(s) 40, 183, 428, 567
Mox20I TGGCCA 2 cut(s) 105, 239
Mph1103I ATGCAT 1 cut(s) 330
MscI TGGCCA 2 cut(s) 105, 239
MseI TTAA 3 cut(s) 216, 288, 344
MslI CAYNNNNRTG 1 cut(s) 323
Msp20I TGGCCA 2 cut(s) 105, 239
MspA1I CMGCKG 2 cut(s) 277, 403
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 1 cut(s) 485
MspR9I CCNGG 3 cut(s) 413, 660, 767
MvaI CCWGG 3 cut(s) 413, 660, 767
MwoI GCNNNNNNNGC 7 cut(s) 26, 664, 730, 749, 758, 788, 797
NdeII GATC 6 cut(s) 153, 189, 351, 385, 453, 770
NheI GCTAGC 1 cut(s) 607
NlaIII CATG 5 cut(s) 229, 530, 546, 563, 710
NlaIV GGNNCC 6 cut(s) 21, 273, 370, 425, 657, 723
NsbI TGCGCA 1 cut(s) 317
NsiI ATGCAT 1 cut(s) 330
NspI RCATGY 1 cut(s) 546
NspV TTCGAA 1 cut(s) 632
PciSI GCTCTTC 1 cut(s) 807
PfeI GAWTC 1 cut(s) 83
PflMI CCANNNNNTGG 1 cut(s) 165
PkrI GCNGC 7 cut(s) 234, 271, 279, 402, 603, 606, 682
PpuMI RGGWCCY 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 510
Psp5II RGGWCCY 1 cut(s) 369
Psp6I CCWGG 3 cut(s) 411, 658, 765
PspGI CCWGG 3 cut(s) 411, 658, 765
PspN4I GGNNCC 6 cut(s) 21, 273, 370, 425, 657, 723
PspPI GGNCC 5 cut(s) 369, 409, 424, 722, 763
PspPPI RGGWCCY 1 cut(s) 369
PstI CTGCAG 1 cut(s) 685
PsuI RGATCY 1 cut(s) 453
RsaI GTAC 1 cut(s) 515
RsaNI GTAC 1 cut(s) 514
RseI CAYNNNNRTG 1 cut(s) 323
SacI GAGCTC 1 cut(s) 510
SapI GCTCTTC 1 cut(s) 807
SaqAI TTAA 3 cut(s) 216, 288, 344
SatI GCNGC 7 cut(s) 233, 270, 278, 401, 602, 605, 681
Sau3AI GATC 6 cut(s) 153, 189, 351, 385, 453, 770
Sau96I GGNCC 5 cut(s) 369, 409, 424, 722, 763
ScrFI CCNGG 3 cut(s) 413, 660, 767
SduI GDGCHC 3 cut(s) 135, 510, 802
SexAI ACCWGGT 1 cut(s) 411
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 2 cut(s) 194, 681
SfuI TTCGAA 1 cut(s) 632
SinI GGWCC 3 cut(s) 369, 409, 424
SmiMI CAYNNNNRTG 1 cut(s) 323
SmlI CTYRAG 2 cut(s) 263, 287
SmoI CTYRAG 2 cut(s) 263, 287
Sse9I AATT 2 cut(s) 75, 220
SsiI CCGC 6 cut(s) 269, 275, 302, 403, 605, 761
SspMI CTAG 2 cut(s) 608, 695
SstI GAGCTC 1 cut(s) 510
StyD4I CCNGG 3 cut(s) 411, 658, 765
TaaI ACNGT 3 cut(s) 111, 638, 730
TaiI ACGT 3 cut(s) 165, 213, 255
TaqI TCGA 3 cut(s) 354, 632, 773
TasI AATT 2 cut(s) 75, 220
TauI GCSGC 2 cut(s) 272, 607
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 3 cut(s) 216, 288, 344
Tru9I TTAA 3 cut(s) 216, 288, 344
TscAI CASTG 3 cut(s) 501, 618, 690
TseI GCWGC 5 cut(s) 232, 277, 400, 601, 680
TspDTI ATGAA 1 cut(s) 770
TspGWI ACGGA 1 cut(s) 416
TspRI CASTG 3 cut(s) 501, 618, 690
Van91I CCANNNNNTGG 1 cut(s) 165
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 3 cut(s) 369, 409, 424
XagI CCTNNNNNAGG 1 cut(s) 197
XceI RCATGY 1 cut(s) 546
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XspI CTAG 2 cut(s) 608, 695
Zsp2I ATGCAT 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.