ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 168 |
| AciI | CCGC | 5 cut(s) | 5, 17, 20, 152, 332 |
| AclWI | GGATC | 5 cut(s) | 80, 81, 187, 200, 221 |
| AcuI | CTGAAG | 1 cut(s) | 197 |
| AcyI | GRCGYC | 2 cut(s) | 23, 109 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| AjnI | CCWGG | 1 cut(s) | 57 |
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| Alw26I | GTCTC | 1 cut(s) | 30 |
| AlwI | GGATC | 5 cut(s) | 80, 81, 187, 200, 221 |
| AoxI | GGCC | 2 cut(s) | 45, 268 |
| AspS9I | GGNCC | 1 cut(s) | 269 |
| BamHI | GGATCC | 1 cut(s) | 192 |
| BanII | GRGCYC | 1 cut(s) | 328 |
| BccI | CCATC | 1 cut(s) | 148 |
| BceAI | ACGGC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 1 cut(s) | 59 |
| BcoDI | GTCTC | 1 cut(s) | 30 |
| BisI | GCNGC | 4 cut(s) | 6, 18, 21, 153 |
| BlsI | GCNGC | 4 cut(s) | 7, 19, 22, 154 |
| Bme1390I | CCNGG | 1 cut(s) | 59 |
| BmgT120I | GGNCC | 1 cut(s) | 269 |
| BmiI | GGNNCC | 2 cut(s) | 194, 339 |
| BmrFI | CCNGG | 1 cut(s) | 59 |
| BmsI | GCATC | 2 cut(s) | 259, 282 |
| BsaHI | GRCGYC | 2 cut(s) | 23, 109 |
| BsaJI | CCNNGG | 1 cut(s) | 272 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| BseBI | CCWGG | 1 cut(s) | 59 |
| BseDI | CCNNGG | 1 cut(s) | 272 |
| BseGI | GGATG | 1 cut(s) | 140 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| BseRI | GAGGAG | 2 cut(s) | 56, 218 |
| BshFI | GGCC | 2 cut(s) | 47, 270 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| BsmAI | GTCTC | 1 cut(s) | 30 |
| BsmBI | CGTCTC | 1 cut(s) | 30 |
| BsnI | GGCC | 2 cut(s) | 47, 270 |
| Bsp1286I | GDGCHC | 1 cut(s) | 328 |
| Bsp143I | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| Bsp19I | CCATGG | 1 cut(s) | 272 |
| BspACI | CCGC | 5 cut(s) | 5, 17, 20, 152, 332 |
| BspANI | GGCC | 2 cut(s) | 47, 270 |
| BspLI | GGNNCC | 2 cut(s) | 194, 339 |
| BspPI | GGATC | 5 cut(s) | 80, 81, 187, 200, 221 |
| BssECI | CCNNGG | 1 cut(s) | 272 |
| BssMI | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| BssNI | GRCGYC | 2 cut(s) | 23, 109 |
| BssT1I | CCWWGG | 1 cut(s) | 272 |
| Bst2UI | CCWGG | 1 cut(s) | 59 |
| Bst4CI | ACNGT | 1 cut(s) | 317 |
| Bst6I | CTCTTC | 1 cut(s) | 195 |
| BstACI | GRCGYC | 2 cut(s) | 23, 109 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 14 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstDSI | CCRYGG | 1 cut(s) | 272 |
| BstF5I | GGATG | 1 cut(s) | 140 |
| BstKTI | GATC | 5 cut(s) | 76, 81, 88, 195, 216 |
| BstMAI | GTCTC | 1 cut(s) | 30 |
| BstMBI | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 29 |
| BstNI | CCWGG | 1 cut(s) | 59 |
| BstSCI | CCNGG | 1 cut(s) | 57 |
| BstX2I | RGATCY | 3 cut(s) | 73, 192, 213 |
| BstYI | RGATCY | 3 cut(s) | 73, 192, 213 |
| BsuRI | GGCC | 2 cut(s) | 47, 270 |
| BtgI | CCRYGG | 1 cut(s) | 272 |
| BtgZI | GCGATG | 1 cut(s) | 170 |
| BtsCI | GGATG | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 269 |
| CseI | GACGC | 2 cut(s) | 12, 98 |
| CsiI | ACCWGGT | 1 cut(s) | 57 |
| CviAII | CATG | 3 cut(s) | 254, 263, 273 |
| CviJI | RGCY | 6 cut(s) | 47, 175, 270, 305, 326, 338 |
| CviKI_1 | RGCY | 6 cut(s) | 47, 175, 270, 305, 326, 338 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 5 cut(s) | 75, 80, 87, 194, 215 |
| DpnII | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| Eam1104I | CTCTTC | 1 cut(s) | 195 |
| EarI | CTCTTC | 1 cut(s) | 195 |
| EciI | GGCGGA | 1 cut(s) | 347 |
| Eco130I | CCWWGG | 1 cut(s) | 272 |
| Eco24I | GRGCYC | 1 cut(s) | 328 |
| Eco57I | CTGAAG | 1 cut(s) | 197 |
| EcoRII | CCWGG | 1 cut(s) | 57 |
| EcoT14I | CCWWGG | 1 cut(s) | 272 |
| EcoT38I | GRGCYC | 1 cut(s) | 328 |
| ErhI | CCWWGG | 1 cut(s) | 272 |
| Esp3I | CGTCTC | 1 cut(s) | 30 |
| FaeI | CATG | 3 cut(s) | 257, 266, 276 |
| FaiI | YATR | 5 cut(s) | 103, 255, 264, 274, 312 |
| FatI | CATG | 3 cut(s) | 253, 262, 272 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 18, 21, 153 |
| FokI | GGATG | 1 cut(s) | 127 |
| FriOI | GRGCYC | 1 cut(s) | 328 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 18, 21, 153 |
| GluI | GCNGC | 4 cut(s) | 6, 18, 21, 153 |
| HaeIII | GGCC | 2 cut(s) | 47, 270 |
| HgaI | GACGC | 2 cut(s) | 12, 98 |
| Hin1I | GRCGYC | 2 cut(s) | 23, 109 |
| Hin1II | CATG | 3 cut(s) | 257, 266, 276 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 4 cut(s) | 40, 78, 85, 192 |
| Hpy188III | TCNNGA | 1 cut(s) | 162 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| HpyAV | CCTTC | 2 cut(s) | 154, 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 317 |
| HpyCH4V | TGCA | 1 cut(s) | 346 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 29 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Hsp92I | GRCGYC | 2 cut(s) | 23, 109 |
| Hsp92II | CATG | 3 cut(s) | 257, 266, 276 |
| Kzo9I | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| LmnI | GCTCC | 2 cut(s) | 235, 343 |
| LpnPI | CCDG | 7 cut(s) | 44, 55, 71, 113, 175, 224, 314 |
| LweI | GCATC | 2 cut(s) | 259, 282 |
| MabI | ACCWGGT | 1 cut(s) | 57 |
| MalI | GATC | 5 cut(s) | 75, 80, 87, 194, 215 |
| MboI | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| MboII | GAAGA | 3 cut(s) | 208, 212, 251 |
| MflI | RGATCY | 3 cut(s) | 73, 192, 213 |
| MhlI | GDGCHC | 1 cut(s) | 328 |
| MluCI | AATT | 2 cut(s) | 227, 286 |
| MmeI | TCCRAC | 1 cut(s) | 18 |
| MnlI | CCTC | 8 cut(s) | 4, 34, 37, 177, 196, 199, 260, 328 |
| MseI | TTAA | 1 cut(s) | 231 |
| MspR9I | CCNGG | 1 cut(s) | 59 |
| MvaI | CCWGG | 1 cut(s) | 59 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 29 |
| NcoI | CCATGG | 1 cut(s) | 272 |
| NdeII | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| NlaIII | CATG | 3 cut(s) | 257, 266, 276 |
| NlaIV | GGNNCC | 2 cut(s) | 194, 339 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 168 |
| PkrI | GCNGC | 4 cut(s) | 7, 19, 22, 154 |
| Psp6I | CCWGG | 1 cut(s) | 57 |
| PspGI | CCWGG | 1 cut(s) | 57 |
| PspN4I | GGNNCC | 2 cut(s) | 194, 339 |
| PspPI | GGNCC | 1 cut(s) | 269 |
| PsuI | RGATCY | 3 cut(s) | 73, 192, 213 |
| SaqAI | TTAA | 1 cut(s) | 231 |
| SatI | GCNGC | 4 cut(s) | 6, 18, 21, 153 |
| Sau3AI | GATC | 5 cut(s) | 73, 78, 85, 192, 213 |
| Sau96I | GGNCC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 1 cut(s) | 59 |
| SduI | GDGCHC | 1 cut(s) | 328 |
| SetI | ASST | 4 cut(s) | 60, 132, 177, 210 |
| SexAI | ACCWGGT | 1 cut(s) | 57 |
| SfaNI | GCATC | 2 cut(s) | 259, 282 |
| Sse9I | AATT | 2 cut(s) | 227, 286 |
| SsiI | CCGC | 5 cut(s) | 5, 17, 20, 152, 332 |
| StyD4I | CCNGG | 1 cut(s) | 57 |
| StyI | CCWWGG | 1 cut(s) | 272 |
| TaaI | ACNGT | 1 cut(s) | 317 |
| TaqI | TCGA | 1 cut(s) | 290 |
| TasI | AATT | 2 cut(s) | 227, 286 |
| TauI | GCSGC | 4 cut(s) | 8, 20, 23, 155 |
| Tru1I | TTAA | 1 cut(s) | 231 |
| Tru9I | TTAA | 1 cut(s) | 231 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| TspGWI | ACGGA | 2 cut(s) | 78, 185 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 168 |