RING-H2 finger protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-rbx1 | PF12678 | 72 - 119 | 1.4e-09 | RING-H2 zinc finger domain |
| zf-RING_2 | PF13639 | 75 - 119 | 2.2e-13 | Ring finger domain |
| zf-C3HC4 | PF00097 | 76 - 118 | 1.9e-09 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 76 - 116 | 5.9e-09 | RING-type zinc-finger |
| zf-RING_11 | PF17123 | 76 - 104 | 5.2e-09 | RING-like zinc finger |
| zf-C3HC4_2 | PF13923 | 76 - 118 | 2.6e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_5 | PF14634 | 76 - 119 | 3.7e-06 | zinc-RING finger domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 35 |
| Acc36I | ACCTGC | 2 cut(s) | 35, 233 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AciI | CCGC | 1 cut(s) | 263 |
| AclWI | GGATC | 3 cut(s) | 31, 44, 129 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 33 |
| AgsI | TTSAA | 3 cut(s) | 55, 112, 370 |
| AjnI | CCWGG | 1 cut(s) | 171 |
| AluBI | AGCT | 3 cut(s) | 62, 101, 148 |
| AluI | AGCT | 3 cut(s) | 62, 101, 148 |
| AlwI | GGATC | 3 cut(s) | 31, 44, 129 |
| AoxI | GGCC | 1 cut(s) | 216 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| BamHI | GGATCC | 1 cut(s) | 36 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BauI | CACGAG | 1 cut(s) | 212 |
| BbsI | GAAGAC | 1 cut(s) | 146 |
| BccI | CCATC | 2 cut(s) | 17, 316 |
| BciT130I | CCWGG | 1 cut(s) | 173 |
| BfaI | CTAG | 3 cut(s) | 65, 140, 165 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfuAI | ACCTGC | 2 cut(s) | 35, 233 |
| Bme1390I | CCNGG | 1 cut(s) | 173 |
| BmiI | GGNNCC | 2 cut(s) | 6, 38 |
| BmrFI | CCNGG | 1 cut(s) | 173 |
| BmsI | GCATC | 1 cut(s) | 250 |
| BpiI | GAAGAC | 1 cut(s) | 146 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 419 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 33 |
| BseBI | CCWGG | 1 cut(s) | 173 |
| BseDI | CCNNGG | 1 cut(s) | 419 |
| BseGI | GGATG | 4 cut(s) | 124, 259, 327, 415 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 33 |
| BseMII | CTCAG | 2 cut(s) | 140, 243 |
| BshFI | GGCC | 1 cut(s) | 218 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiSI | CCGG | 1 cut(s) | 69 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 33 |
| BsnI | GGCC | 1 cut(s) | 218 |
| Bsp143I | GATC | 2 cut(s) | 36, 121 |
| BspACI | CCGC | 1 cut(s) | 263 |
| BspANI | GGCC | 1 cut(s) | 218 |
| BspCNI | CTCAG | 2 cut(s) | 141, 242 |
| BspLI | GGNNCC | 2 cut(s) | 6, 38 |
| BspMI | ACCTGC | 2 cut(s) | 35, 233 |
| BspPI | GGATC | 3 cut(s) | 31, 44, 129 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BssECI | CCNNGG | 1 cut(s) | 419 |
| BssMI | GATC | 2 cut(s) | 36, 121 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 212 |
| BssT1I | CCWWGG | 1 cut(s) | 419 |
| Bst2BI | CACGAG | 1 cut(s) | 212 |
| Bst2UI | CCWGG | 1 cut(s) | 173 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 3 cut(s) | 149, 229, 279 |
| BstF5I | GGATG | 4 cut(s) | 124, 259, 327, 415 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 2 cut(s) | 39, 124 |
| BstMBI | GATC | 2 cut(s) | 36, 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 234 |
| BstNI | CCWGG | 1 cut(s) | 173 |
| BstNSI | RCATGY | 1 cut(s) | 293 |
| BstSCI | CCNGG | 1 cut(s) | 171 |
| BstV2I | GAAGAC | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 36 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 420 |
| BstYI | RGATCY | 1 cut(s) | 36 |
| BsuRI | GGCC | 1 cut(s) | 218 |
| BtsCI | GGATG | 4 cut(s) | 124, 259, 327, 415 |
| BveI | ACCTGC | 2 cut(s) | 35, 233 |
| CfoI | GCGC | 1 cut(s) | 7 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 187, 222 |
| CviAII | CATG | 3 cut(s) | 46, 290, 386 |
| CviJI | RGCY | 8 cut(s) | 62, 68, 101, 115, 148, 164, 218, 270 |
| CviKI_1 | RGCY | 8 cut(s) | 62, 68, 101, 115, 148, 164, 218, 270 |
| DdeI | CTNAG | 3 cut(s) | 149, 229, 279 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DpnI | GATC | 2 cut(s) | 38, 123 |
| DpnII | GATC | 2 cut(s) | 36, 121 |
| Eco130I | CCWWGG | 1 cut(s) | 419 |
| EcoRII | CCWGG | 1 cut(s) | 171 |
| EcoT14I | CCWWGG | 1 cut(s) | 419 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 419 |
| FaeI | CATG | 3 cut(s) | 49, 293, 389 |
| FaiI | YATR | 8 cut(s) | 47, 107, 291, 300, 302, 311, 387, 427 |
| FatI | CATG | 3 cut(s) | 45, 289, 385 |
| FauNDI | CATATG | 1 cut(s) | 300 |
| FokI | GGATG | 4 cut(s) | 111, 266, 334, 402 |
| FspBI | CTAG | 3 cut(s) | 65, 140, 165 |
| GlaI | GCGC | 1 cut(s) | 6 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 218 |
| HapII | CCGG | 1 cut(s) | 69 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 49, 293, 389 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HinfI | GANTC | 2 cut(s) | 151, 168 |
| HpaII | CCGG | 1 cut(s) | 69 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 2 cut(s) | 209, 347 |
| Hpy188III | TCNNGA | 1 cut(s) | 140 |
| Hpy8I | GTNNAC | 2 cut(s) | 209, 347 |
| HpyAV | CCTTC | 1 cut(s) | 138 |
| HpyCH4IV | ACGT | 1 cut(s) | 394 |
| HpyCH4V | TGCA | 4 cut(s) | 49, 135, 181, 309 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 3 cut(s) | 149, 229, 279 |
| HpySE526I | ACGT | 1 cut(s) | 394 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 3 cut(s) | 49, 293, 389 |
| HspAI | GCGC | 1 cut(s) | 5 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Kzo9I | GATC | 2 cut(s) | 36, 121 |
| LweI | GCATC | 1 cut(s) | 250 |
| MaeI | CTAG | 3 cut(s) | 65, 140, 165 |
| MaeII | ACGT | 1 cut(s) | 394 |
| MalI | GATC | 2 cut(s) | 38, 123 |
| MboI | GATC | 2 cut(s) | 36, 121 |
| MboII | GAAGA | 5 cut(s) | 10, 146, 269, 358, 401 |
| MfeI | CAATTG | 1 cut(s) | 272 |
| MflI | RGATCY | 1 cut(s) | 36 |
| MluCI | AATT | 2 cut(s) | 75, 272 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| MnlI | CCTC | 3 cut(s) | 208, 244, 319 |
| MseI | TTAA | 1 cut(s) | 430 |
| MspA1I | CMGCKG | 2 cut(s) | 101, 148 |
| MspI | CCGG | 1 cut(s) | 69 |
| MspR9I | CCNGG | 1 cut(s) | 173 |
| MunI | CAATTG | 1 cut(s) | 272 |
| MvaI | CCWGG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 234 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NdeI | CATATG | 1 cut(s) | 300 |
| NdeII | GATC | 2 cut(s) | 36, 121 |
| NlaIII | CATG | 3 cut(s) | 49, 293, 389 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 38 |
| NspI | RCATGY | 1 cut(s) | 293 |
| PaqCI | CACCTGC | 1 cut(s) | 35 |
| PfeI | GAWTC | 1 cut(s) | 168 |
| PfoI | TCCNGGA | 1 cut(s) | 171 |
| PleI | GAGTC | 1 cut(s) | 159 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 1 cut(s) | 159 |
| Psp6I | CCWGG | 1 cut(s) | 171 |
| PspGI | CCWGG | 1 cut(s) | 171 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 38 |
| PsuI | RGATCY | 1 cut(s) | 36 |
| PvuII | CAGCTG | 2 cut(s) | 101, 148 |
| SaqAI | TTAA | 1 cut(s) | 430 |
| Sau3AI | GATC | 2 cut(s) | 36, 121 |
| SchI | GAGTC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 1 cut(s) | 173 |
| SetI | ASST | 7 cut(s) | 29, 64, 103, 150, 227, 359, 397 |
| SfaNI | GCATC | 1 cut(s) | 250 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| Sse9I | AATT | 2 cut(s) | 75, 272 |
| SsiI | CCGC | 1 cut(s) | 263 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspMI | CTAG | 3 cut(s) | 65, 140, 165 |
| StyD4I | CCNGG | 1 cut(s) | 171 |
| StyI | CCWWGG | 1 cut(s) | 419 |
| TaiI | ACGT | 1 cut(s) | 397 |
| TasI | AATT | 2 cut(s) | 75, 272 |
| TfiI | GAWTC | 1 cut(s) | 168 |
| Tru1I | TTAA | 1 cut(s) | 430 |
| Tru9I | TTAA | 1 cut(s) | 430 |
| TspDTI | ATGAA | 2 cut(s) | 34, 270 |
| XbaI | TCTAGA | 1 cut(s) | 139 |
| XceI | RCATGY | 1 cut(s) | 293 |
| XspI | CTAG | 3 cut(s) | 65, 140, 165 |