DEAD-box ATP-dependent RNA helicase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C2 | PF00168 | 4 - 93 | 1.3e-21 | C2 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 234 |
| AclI | AACGTT | 1 cut(s) | 315 |
| AclWI | GGATC | 3 cut(s) | 71, 84, 148 |
| AfaI | GTAC | 1 cut(s) | 311 |
| AgsI | TTSAA | 4 cut(s) | 20, 100, 208, 283 |
| AjnI | CCWGG | 1 cut(s) | 330 |
| AluBI | AGCT | 2 cut(s) | 165, 393 |
| AluI | AGCT | 2 cut(s) | 165, 393 |
| Alw26I | GTCTC | 1 cut(s) | 377 |
| AlwI | GGATC | 3 cut(s) | 71, 84, 148 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 396 |
| AoxI | GGCC | 1 cut(s) | 43 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 24, 392 |
| AspS9I | GGNCC | 1 cut(s) | 328 |
| AsuHPI | GGTGA | 2 cut(s) | 166, 172 |
| AvaII | GGWCC | 1 cut(s) | 328 |
| BamHI | GGATCC | 1 cut(s) | 76 |
| BbsI | GAAGAC | 2 cut(s) | 107, 228 |
| BccI | CCATC | 1 cut(s) | 429 |
| BciT130I | CCWGG | 1 cut(s) | 332 |
| BcoDI | GTCTC | 1 cut(s) | 377 |
| Bme1390I | CCNGG | 1 cut(s) | 332 |
| Bme18I | GGWCC | 1 cut(s) | 328 |
| BmgT120I | GGNCC | 1 cut(s) | 328 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BmrFI | CCNGG | 1 cut(s) | 332 |
| BpiI | GAAGAC | 2 cut(s) | 107, 228 |
| Bpu10I | CCTNAGC | 1 cut(s) | 375 |
| Bse1I | ACTGG | 1 cut(s) | 275 |
| BseBI | CCWGG | 1 cut(s) | 332 |
| BseGI | GGATG | 2 cut(s) | 223, 440 |
| BseMII | CTCAG | 1 cut(s) | 366 |
| BseNI | ACTGG | 1 cut(s) | 275 |
| BshFI | GGCC | 1 cut(s) | 45 |
| BsiSI | CCGG | 1 cut(s) | 380 |
| BslFI | GGGAC | 1 cut(s) | 25 |
| BsmAI | GTCTC | 1 cut(s) | 377 |
| BsmBI | CGTCTC | 1 cut(s) | 377 |
| BsmFI | GGGAC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 45 |
| Bsp143I | GATC | 3 cut(s) | 76, 140, 348 |
| BspACI | CCGC | 1 cut(s) | 234 |
| BspANI | GGCC | 1 cut(s) | 45 |
| BspCNI | CTCAG | 1 cut(s) | 367 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspPI | GGATC | 3 cut(s) | 71, 84, 148 |
| BsrI | ACTGG | 1 cut(s) | 275 |
| BssMI | GATC | 3 cut(s) | 76, 140, 348 |
| Bst2UI | CCWGG | 1 cut(s) | 332 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 178 |
| BstDEI | CTNAG | 1 cut(s) | 375 |
| BstF5I | GGATG | 2 cut(s) | 223, 440 |
| BstKTI | GATC | 3 cut(s) | 79, 143, 351 |
| BstMAI | GTCTC | 1 cut(s) | 377 |
| BstMBI | GATC | 3 cut(s) | 76, 140, 348 |
| BstNI | CCWGG | 1 cut(s) | 332 |
| BstSCI | CCNGG | 1 cut(s) | 330 |
| BstV2I | GAAGAC | 2 cut(s) | 107, 228 |
| BstX2I | RGATCY | 2 cut(s) | 76, 140 |
| BstYI | RGATCY | 2 cut(s) | 76, 140 |
| BsuRI | GGCC | 1 cut(s) | 45 |
| BtsCI | GGATG | 2 cut(s) | 223, 440 |
| BtsIMutI | CAGTG | 3 cut(s) | 54, 120, 282 |
| CaiI | CAGNNNCTG | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 328 |
| CseI | GACGC | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 310 |
| CviAII | CATG | 2 cut(s) | 153, 341 |
| CviJI | RGCY | 6 cut(s) | 5, 45, 165, 274, 379, 393 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 45, 165, 274, 379, 393 |
| CviQI | GTAC | 1 cut(s) | 310 |
| DdeI | CTNAG | 1 cut(s) | 375 |
| DpnI | GATC | 3 cut(s) | 78, 142, 350 |
| DpnII | GATC | 3 cut(s) | 76, 140, 348 |
| Eco147I | AGGCCT | 1 cut(s) | 45 |
| Eco47I | GGWCC | 1 cut(s) | 328 |
| EcoRII | CCWGG | 1 cut(s) | 330 |
| Esp3I | CGTCTC | 1 cut(s) | 377 |
| FaeI | CATG | 2 cut(s) | 156, 344 |
| FaiI | YATR | 7 cut(s) | 9, 84, 154, 246, 342, 411, 429 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 12, 44 |
| FaqI | GGGAC | 1 cut(s) | 25 |
| FatI | CATG | 2 cut(s) | 152, 340 |
| FokI | GGATG | 2 cut(s) | 230, 447 |
| HaeIII | GGCC | 1 cut(s) | 45 |
| HapII | CCGG | 1 cut(s) | 380 |
| HgaI | GACGC | 1 cut(s) | 22 |
| Hin1II | CATG | 2 cut(s) | 156, 344 |
| HincII | GTYRAC | 1 cut(s) | 322 |
| HindII | GTYRAC | 1 cut(s) | 322 |
| HindIII | AAGCTT | 1 cut(s) | 163 |
| HinfI | GANTC | 2 cut(s) | 360, 443 |
| HpaII | CCGG | 1 cut(s) | 380 |
| HphI | GGTGA | 2 cut(s) | 166, 172 |
| Hpy166II | GTNNAC | 2 cut(s) | 174, 322 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 196 |
| Hpy188III | TCNNGA | 2 cut(s) | 374, 402 |
| Hpy8I | GTNNAC | 2 cut(s) | 174, 322 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 178 |
| HpyCH4IV | ACGT | 1 cut(s) | 315 |
| HpyF3I | CTNAG | 1 cut(s) | 375 |
| HpySE526I | ACGT | 1 cut(s) | 315 |
| Hsp92II | CATG | 2 cut(s) | 156, 344 |
| Kzo9I | GATC | 3 cut(s) | 76, 140, 348 |
| LpnPI | CCDG | 7 cut(s) | 162, 288, 317, 344, 387, 387, 393 |
| MaeII | ACGT | 1 cut(s) | 315 |
| MaeIII | GTNAC | 1 cut(s) | 178 |
| MalI | GATC | 3 cut(s) | 78, 142, 350 |
| MboI | GATC | 3 cut(s) | 76, 140, 348 |
| MboII | GAAGA | 3 cut(s) | 112, 124, 233 |
| MflI | RGATCY | 2 cut(s) | 76, 140 |
| MluCI | AATT | 3 cut(s) | 291, 354, 364 |
| MlyI | GAGTC | 1 cut(s) | 354 |
| MmeI | TCCRAC | 1 cut(s) | 229 |
| MnlI | CCTC | 2 cut(s) | 56, 415 |
| MroXI | GAANNNNTTC | 2 cut(s) | 24, 392 |
| MseI | TTAA | 1 cut(s) | 33 |
| MspA1I | CMGCKG | 1 cut(s) | 236 |
| MspI | CCGG | 1 cut(s) | 380 |
| MspR9I | CCNGG | 1 cut(s) | 332 |
| MvaI | CCWGG | 1 cut(s) | 332 |
| NdeII | GATC | 3 cut(s) | 76, 140, 348 |
| NlaIII | CATG | 2 cut(s) | 156, 344 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| PceI | AGGCCT | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 2 cut(s) | 24, 392 |
| PfeI | GAWTC | 1 cut(s) | 443 |
| PleI | GAGTC | 1 cut(s) | 354 |
| PpsI | GAGTC | 1 cut(s) | 354 |
| Psp1406I | AACGTT | 1 cut(s) | 315 |
| Psp6I | CCWGG | 1 cut(s) | 330 |
| PspGI | CCWGG | 1 cut(s) | 330 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PspPI | GGNCC | 1 cut(s) | 328 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 279, 311 |
| PstNI | CAGNNNCTG | 1 cut(s) | 396 |
| PsuI | RGATCY | 2 cut(s) | 76, 140 |
| RsaI | GTAC | 1 cut(s) | 311 |
| RsaNI | GTAC | 1 cut(s) | 310 |
| SaqAI | TTAA | 1 cut(s) | 33 |
| Sau3AI | GATC | 3 cut(s) | 76, 140, 348 |
| Sau96I | GGNCC | 1 cut(s) | 328 |
| SchI | GAGTC | 1 cut(s) | 354 |
| ScrFI | CCNGG | 1 cut(s) | 332 |
| SetI | ASST | 4 cut(s) | 167, 230, 318, 395 |
| SinI | GGWCC | 1 cut(s) | 328 |
| Sse9I | AATT | 3 cut(s) | 291, 354, 364 |
| SseBI | AGGCCT | 1 cut(s) | 45 |
| SsiI | CCGC | 1 cut(s) | 234 |
| StuI | AGGCCT | 1 cut(s) | 45 |
| StyD4I | CCNGG | 1 cut(s) | 330 |
| TaaI | ACNGT | 2 cut(s) | 124, 178 |
| TaiI | ACGT | 1 cut(s) | 318 |
| TasI | AATT | 3 cut(s) | 291, 354, 364 |
| TfiI | GAWTC | 1 cut(s) | 443 |
| Tru1I | TTAA | 1 cut(s) | 33 |
| Tru9I | TTAA | 1 cut(s) | 33 |
| TscAI | CASTG | 3 cut(s) | 61, 127, 282 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspDTI | ATGAA | 3 cut(s) | 174, 191, 234 |
| TspRI | CASTG | 3 cut(s) | 61, 127, 282 |
| VpaK11BI | GGWCC | 1 cut(s) | 328 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 338 |
| XmnI | GAANNNNTTC | 2 cut(s) | 24, 392 |