Rmu_sc0000146.1_g000004

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000146.1
OG0000123
Physical Location & Seq
Forward (+)
8954 .. 9865
912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000146.1_g000004.1.cds

Sequence Viewer

Length: 912 bp
atggcggcggaaggtgcagcgacgtctctcgccttgtcggaggaggccatagtgagcctggttgggggcggggatgtgatctatgatccattcttttacctatgtgggcgtttgctaaccaagaaaccggtggttattccatcgttctcggcggcgatgtccggaatatggcggctgaatgatcaggttttgatccgtgaagaagagggtgggatctttgtgttcctttttaaggagcaggaggtgaagcatcgtgttcttcatggcgggccctggtattacagtaactcgatgttgttattggctgattatgatggtgttggggcactcgcagaggttcctctgcactccctggagctgtgggtggcggtgataggtctgagagttgccatgcgcaacgaacgggctctcacaaggcttggtaacatgctaggaacctttgtcaaggcggatcgtgtggcgctgcaacgaaaggaggctgtccagaggattcggttgatccatgatgtgcgccaccgagtttgggctcggcgtacgatctgtttctcgccggaggtttctgtggtccttgaattccggtatgaaaaatgccgcggaatctgcaaggcttgtggtttcttcactcatggcggaggggagtgcgatcggaagctggtgcaggaattggttgtggaggaactgtttctgccatctgaattgcagaaggaggcaggtccgccgtccaatgcctcagtggaagacccgtcgacgtcaatcttttctgcagcctggattaacaaagttggcacctgcgctgggggttctggtaccatgcaggaggttgatgctgggaaggaagcggcggagctgaggacgggatccatgttgtggatccatgttggctgcttcgtgtttttcggcgggaaaccctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

303

Amino Acids

33.35

Weight (kDa)

6.41

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 797
AatII GACGTC 2 cut(s) 26, 752
Acc16I TGCGCA 1 cut(s) 395
Acc36I ACCTGC 2 cut(s) 701, 797
Acc65I GGTACC 1 cut(s) 806
AccB1I GGYRCC 2 cut(s) 785, 806
AccB7I CCANNNNNTGG 1 cut(s) 867
AccI GTMKAC 1 cut(s) 746
AccII CGCG 1 cut(s) 594
AccIII TCCGGA 1 cut(s) 161
AclWI GGATC 9 cut(s) 80, 187, 221, 459, 493, 852, 865, 865, 878
AcsI RAATTY 1 cut(s) 572
AcyI GRCGYC 2 cut(s) 23, 749
AfaI GTAC 2 cut(s) 535, 808
AfiI CCNNNNNNNGG 6 cut(s) 64, 168, 232, 523, 795, 867
AgeI ACCGGT 1 cut(s) 127
AgsI TTSAA 1 cut(s) 572
AjnI CCWGG 4 cut(s) 57, 272, 351, 767
AluBI AGCT 3 cut(s) 358, 652, 847
AluI AGCT 3 cut(s) 358, 652, 847
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 9 cut(s) 80, 187, 221, 459, 493, 852, 865, 865, 878
Aor13HI TCCGGA 1 cut(s) 161
AoxI GGCC 2 cut(s) 45, 269
ApaI GGGCCC 1 cut(s) 273
ApeKI GCWGC 4 cut(s) 17, 463, 764, 882
ApoI RAATTY 1 cut(s) 572
AsiGI ACCGGT 1 cut(s) 127
Asp700I GAANNNNTTC 1 cut(s) 681
Asp718I GGTACC 1 cut(s) 806
AspLEI GCGC 4 cut(s) 396, 463, 513, 794
AspS9I GGNCC 4 cut(s) 269, 270, 565, 713
AsuHPI GGTGA 2 cut(s) 256, 382
AvaII GGWCC 2 cut(s) 565, 713
BaeGI GKGCMC 2 cut(s) 273, 328
BamHI GGATCC 2 cut(s) 857, 870
BanI GGYRCC 2 cut(s) 785, 806
BanII GRGCYC 3 cut(s) 273, 409, 529
BbsI GAAGAC 1 cut(s) 744
BbvCI CCTCAGC 1 cut(s) 848
BbvI GCAGC 4 cut(s) 29, 450, 776, 869
BccI CCATC 3 cut(s) 148, 308, 697
BceAI ACGGC 1 cut(s) 703
BciT130I CCWGG 4 cut(s) 59, 274, 353, 769
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 1 cut(s) 431
BfmI CTRYAG 1 cut(s) 762
BfoI RGCGCY 1 cut(s) 464
BfuAI ACCTGC 2 cut(s) 701, 797
BisI GCNGC 9 cut(s) 6, 18, 153, 173, 464, 592, 765, 840, 883
BlsI GCNGC 9 cut(s) 7, 19, 154, 174, 465, 593, 766, 841, 884
Bme1390I CCNGG 4 cut(s) 59, 274, 353, 769
Bme18I GGWCC 2 cut(s) 565, 713
BmgT120I GGNCC 4 cut(s) 269, 270, 565, 713
BmiI GGNNCC 7 cut(s) 271, 339, 436, 787, 808, 859, 872
BmrFI CCNGG 4 cut(s) 59, 274, 353, 769
BmsI GCATC 2 cut(s) 259, 814
BpiI GAAGAC 1 cut(s) 744
BpmI CTGGAG 1 cut(s) 374
Bpu10I CCTNAGC 1 cut(s) 848
BsaHI GRCGYC 2 cut(s) 23, 749
BsaJI CCNNGG 3 cut(s) 272, 351, 592
BsaWI WCCGGW 3 cut(s) 127, 161, 576
BsaXI ACNNNNNCTCC 2 cut(s) 665, 695
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 168, 232, 523, 795, 867
Bse118I RCCGGY 1 cut(s) 127
BseAI TCCGGA 1 cut(s) 161
BseBI CCWGG 4 cut(s) 59, 274, 353, 769
BseDI CCNNGG 3 cut(s) 272, 351, 592
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 6 cut(s) 64, 168, 232, 523, 795, 867
BseMII CTCAG 3 cut(s) 371, 744, 839
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 2 cut(s) 273, 328
BseXI GCAGC 4 cut(s) 29, 450, 776, 869
BseYI CCCAGC 2 cut(s) 794, 827
BsgI GTGCAG 3 cut(s) 36, 329, 677
Bsh1236I CGCG 1 cut(s) 594
Bsh1285I CGRYCG 1 cut(s) 646
BshFI GGCC 2 cut(s) 47, 271
BshNI GGYRCC 2 cut(s) 785, 806
BshTI ACCGGT 1 cut(s) 127
BsiEI CGRYCG 1 cut(s) 646
BsiSI CCGG 4 cut(s) 128, 162, 551, 577
BsiWI CGTACG 1 cut(s) 533
BslI CCNNNNNNNGG 6 cut(s) 64, 168, 232, 523, 795, 867
BsmAI GTCTC 1 cut(s) 30
BsmBI CGTCTC 1 cut(s) 30
BsnI GGCC 2 cut(s) 47, 271
Bsp120I GGGCCC 1 cut(s) 269
Bsp1286I GDGCHC 4 cut(s) 273, 328, 409, 529
Bsp13I TCCGGA 1 cut(s) 161
BspANI GGCC 2 cut(s) 47, 271
BspCNI CTCAG 3 cut(s) 372, 743, 840
BspEI TCCGGA 1 cut(s) 161
BspFNI CGCG 1 cut(s) 594
BspLI GGNNCC 7 cut(s) 271, 339, 436, 787, 808, 859, 872
BspMAI CTGCAG 1 cut(s) 766
BspMI ACCTGC 2 cut(s) 701, 797
BspPI GGATC 9 cut(s) 80, 187, 221, 459, 493, 852, 865, 865, 878
BspT107I GGYRCC 2 cut(s) 785, 806
BsrFI RCCGGY 1 cut(s) 127
BssAI RCCGGY 1 cut(s) 127
BssECI CCNNGG 3 cut(s) 272, 351, 592
BssNI GRCGYC 2 cut(s) 23, 749
Bst2UI CCWGG 4 cut(s) 59, 274, 353, 769
Bst4CI ACNGT 2 cut(s) 284, 681
Bst6I CTCTTC 1 cut(s) 198
BstACI GRCGYC 2 cut(s) 23, 749
BstC8I GCNNGC 1 cut(s) 269
BstDEI CTNAG 3 cut(s) 380, 730, 848
BstDSI CCRYGG 1 cut(s) 592
BstENI CCTNNNNNAGG 1 cut(s) 230
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 1 cut(s) 594
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 4 cut(s) 396, 463, 513, 794
BstMAI GTCTC 1 cut(s) 30
BstMCI CGRYCG 1 cut(s) 646
BstMWI GCNNNNNNNGC 2 cut(s) 14, 600
BstNI CCWGG 4 cut(s) 59, 274, 353, 769
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 4 cut(s) 57, 272, 351, 767
BstSFI CTRYAG 1 cut(s) 762
BstSLI GKGCMC 2 cut(s) 273, 328
BstUI CGCG 1 cut(s) 594
BstV1I GCAGC 4 cut(s) 29, 450, 776, 869
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 3 cut(s) 213, 857, 870
BstYI RGATCY 3 cut(s) 213, 857, 870
BsuRI GGCC 2 cut(s) 47, 271
BtgI CCRYGG 1 cut(s) 592
BtgZI GCGATG 1 cut(s) 170
BtsCI GGATG 1 cut(s) 79
BtsIMutI CAGTG 1 cut(s) 738
BveI ACCTGC 2 cut(s) 701, 797
Cac8I GCNNGC 1 cut(s) 269
CfoI GCGC 4 cut(s) 396, 463, 513, 794
Cfr10I RCCGGY 1 cut(s) 127
Cfr13I GGNCC 4 cut(s) 269, 270, 565, 713
Cfr42I CCGCGG 1 cut(s) 595
Csp6I GTAC 2 cut(s) 534, 807
CspAI ACCGGT 1 cut(s) 127
CspCI CAANNNNNGTGG 4 cut(s) 503, 538, 592, 627
CviAII CATG 8 cut(s) 263, 391, 427, 503, 626, 811, 862, 875
CviQI GTAC 2 cut(s) 534, 807
DdeI CTNAG 3 cut(s) 380, 730, 848
Eam1104I CTCTTC 1 cut(s) 198
EarI CTCTTC 1 cut(s) 198
EciI GGCGGA 5 cut(s) 23, 464, 645, 705, 857
Eco24I GRGCYC 3 cut(s) 273, 409, 529
Eco47I GGWCC 2 cut(s) 565, 713
EcoNI CCTNNNNNAGG 1 cut(s) 230
EcoO109I RGGNCCY 1 cut(s) 270
EcoRI GAATTC 1 cut(s) 572
EcoRII CCWGG 4 cut(s) 57, 272, 351, 767
EcoT38I GRGCYC 3 cut(s) 273, 409, 529
Esp3I CGTCTC 1 cut(s) 30
FaeI CATG 8 cut(s) 266, 394, 430, 506, 629, 814, 865, 878
FatI CATG 8 cut(s) 262, 390, 426, 502, 625, 810, 861, 874
FauI CCCGC 3 cut(s) 62, 260, 893
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 1 cut(s) 746
Fnu4HI GCNGC 9 cut(s) 6, 18, 153, 173, 464, 592, 765, 840, 883
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 3 cut(s) 273, 409, 529
Fsp4HI GCNGC 9 cut(s) 6, 18, 153, 173, 464, 592, 765, 840, 883
FspBI CTAG 1 cut(s) 431
FspI TGCGCA 1 cut(s) 395
GlaI GCGC 4 cut(s) 395, 462, 512, 793
GluI GCNGC 9 cut(s) 6, 18, 153, 173, 464, 592, 765, 840, 883
GsaI CCCAGC 2 cut(s) 798, 831
GsuI CTGGAG 1 cut(s) 374
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 2 cut(s) 47, 271
HapII CCGG 4 cut(s) 128, 162, 551, 577
HhaI GCGC 4 cut(s) 396, 463, 513, 794
Hin1I GRCGYC 2 cut(s) 23, 749
Hin1II CATG 8 cut(s) 266, 394, 430, 506, 629, 814, 865, 878
Hin6I GCGC 4 cut(s) 394, 461, 511, 792
HinP1I GCGC 4 cut(s) 394, 461, 511, 792
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HinfI GANTC 2 cut(s) 490, 597
HpaII CCGG 4 cut(s) 128, 162, 551, 577
HphI GGTGA 2 cut(s) 256, 382
Hpy166II GTNNAC 1 cut(s) 747
Hpy188I TCNGA 4 cut(s) 40, 381, 648, 694
Hpy188III TCNNGA 2 cut(s) 162, 484
Hpy8I GTNNAC 1 cut(s) 747
Hpy99I CGWCG 3 cut(s) 25, 748, 751
HpyAV CCTTC 3 cut(s) 5, 697, 826
HpyCH4III ACNGT 2 cut(s) 284, 681
HpyCH4IV ACGT 2 cut(s) 23, 749
HpyCH4V TGCA 8 cut(s) 17, 346, 466, 603, 658, 700, 764, 814
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 600
HpyF3I CTNAG 3 cut(s) 380, 730, 848
HpySE526I ACGT 2 cut(s) 23, 749
Hsp92I GRCGYC 2 cut(s) 23, 749
Hsp92II CATG 8 cut(s) 266, 394, 430, 506, 629, 814, 865, 878
HspAI GCGC 4 cut(s) 394, 461, 511, 792
Kpn2I TCCGGA 1 cut(s) 161
KpnI GGTACC 1 cut(s) 810
Ksp22I TGATCA 1 cut(s) 181
KspI CCGCGG 1 cut(s) 595
LmnI GCTCC 3 cut(s) 235, 355, 844
Lsp1109I GCAGC 4 cut(s) 29, 450, 776, 869
LweI GCATC 2 cut(s) 259, 814
MaeI CTAG 1 cut(s) 431
MaeII ACGT 2 cut(s) 23, 749
MaeIII GTNAC 2 cut(s) 284, 422
MboII GAAGA 5 cut(s) 212, 215, 251, 610, 749
MflI RGATCY 3 cut(s) 213, 857, 870
MhlI GDGCHC 4 cut(s) 273, 328, 409, 529
MluCI AATT 3 cut(s) 572, 662, 695
MmeI TCCRAC 1 cut(s) 18
MroI TCCGGA 1 cut(s) 161
MroXI GAANNNNTTC 1 cut(s) 681
MseI TTAA 2 cut(s) 231, 774
MspA1I CMGCKG 1 cut(s) 594
MspI CCGG 4 cut(s) 128, 162, 551, 577
MspR9I CCNGG 4 cut(s) 59, 274, 353, 769
MvaI CCWGG 4 cut(s) 59, 274, 353, 769
MvnI CGCG 1 cut(s) 594
MwoI GCNNNNNNNGC 2 cut(s) 14, 600
NlaIII CATG 8 cut(s) 266, 394, 430, 506, 629, 814, 865, 878
NlaIV GGNNCC 7 cut(s) 271, 339, 436, 787, 808, 859, 872
NmeAIII GCCGAG 2 cut(s) 128, 508
NsbI TGCGCA 1 cut(s) 395
NspI RCATGY 1 cut(s) 430
PaqCI CACCTGC 1 cut(s) 797
PdmI GAANNNNTTC 1 cut(s) 681
PfeI GAWTC 2 cut(s) 490, 597
Pfl23II CGTACG 1 cut(s) 533
PflMI CCANNNNNTGG 1 cut(s) 867
PinAI ACCGGT 1 cut(s) 127
PkrI GCNGC 9 cut(s) 7, 19, 154, 174, 465, 593, 766, 841, 884
Ple19I CGATCG 1 cut(s) 646
Psp6I CCWGG 4 cut(s) 57, 272, 351, 767
PspFI CCCAGC 2 cut(s) 794, 827
PspGI CCWGG 4 cut(s) 57, 272, 351, 767
PspLI CGTACG 1 cut(s) 533
PspN4I GGNNCC 7 cut(s) 271, 339, 436, 787, 808, 859, 872
PspOMI GGGCCC 1 cut(s) 269
PspPI GGNCC 4 cut(s) 269, 270, 565, 713
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 3 cut(s) 213, 857, 870
PvuI CGATCG 1 cut(s) 646
RsaI GTAC 2 cut(s) 535, 808
RsaNI GTAC 2 cut(s) 534, 807
SacII CCGCGG 1 cut(s) 595
SalI GTCGAC 1 cut(s) 745
SaqAI TTAA 2 cut(s) 231, 774
SatI GCNGC 9 cut(s) 6, 18, 153, 173, 464, 592, 765, 840, 883
Sau96I GGNCC 4 cut(s) 269, 270, 565, 713
ScrFI CCNGG 4 cut(s) 59, 274, 353, 769
SduI GDGCHC 4 cut(s) 273, 328, 409, 529
SfaNI GCATC 2 cut(s) 259, 814
SfcI CTRYAG 1 cut(s) 762
Sfr303I CCGCGG 1 cut(s) 595
SgrBI CCGCGG 1 cut(s) 595
SgrDI CGTCGACG 1 cut(s) 745
SinI GGWCC 2 cut(s) 565, 713
Sse9I AATT 3 cut(s) 572, 662, 695
SspMI CTAG 1 cut(s) 431
StyD4I CCNGG 4 cut(s) 57, 272, 351, 767
TaaI ACNGT 2 cut(s) 284, 681
TaiI ACGT 2 cut(s) 26, 752
TaqI TCGA 2 cut(s) 290, 746
TasI AATT 3 cut(s) 572, 662, 695
TauI GCSGC 5 cut(s) 8, 155, 175, 594, 842
TfiI GAWTC 2 cut(s) 490, 597
Tru1I TTAA 2 cut(s) 231, 774
Tru9I TTAA 2 cut(s) 231, 774
TscAI CASTG 1 cut(s) 738
TseI GCWGC 4 cut(s) 17, 463, 764, 882
TspDTI ATGAA 2 cut(s) 251, 597
TspGWI ACGGA 1 cut(s) 185
TspRI CASTG 1 cut(s) 738
Van91I CCANNNNNTGG 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 565, 713
XagI CCTNNNNNAGG 1 cut(s) 230
XapI RAATTY 1 cut(s) 572
XceI RCATGY 1 cut(s) 430
XcmI CCANNNNNNNNNTGG 3 cut(s) 55, 127, 730
XmiI GTMKAC 1 cut(s) 746
XmnI GAANNNNTTC 1 cut(s) 681
XspI CTAG 1 cut(s) 431
ZraI GACGTC 2 cut(s) 24, 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.