Rmu_sc0003909.1_g000006

GTP-BINDING protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003909.1
OG0000123
Physical Location & Seq
Forward (+)
39081 .. 41069
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003909.1_g000006.1.cds

Sequence Viewer

Length: 1191 bp
atgtttttggagccggcggtggtgctttcgtcgtttttggcggcgatctccaatgtttggggattgaaggagagggttttgatccagcaggaggaggatgacatatttgtcttccaatttaaggagatggaggtgaagaatcggctacatctccttgaggtgtgggtggctgtgaaagggttacgaatagcgatgcggaatgagaaagccttaaccctaatcggacgcgcagtgggggactttgatagagttgatcagggggcggtgcagagaaaggatcatatccagaggatccatgtgattcatgatgtttgccggaggatttgggcgagacggaggtttgtcttttcaccggttgtttcggtgatggtgaagttgcaatatgaaaaatgccatgggttgtgtgcggcttgtagtttttttggccatgggggaggtccatgtgacggaaggttggcaacggaggcgttggggctggtgatgccgggcggtgaggaggtgctttctccagtgtcagcggttatgggtttggtggaggaggcaactggtgagcaggggttgacggtgggtggctcagagttggaggggcttgattgggtctgttgggccaggggagcgaagttgtccaagtctgctgggcttgatgctggaagaagtccaaacttgggcttgggtgtgagaaaaaaggtttttaaacctagtctggcaattatccctccagaattccaactgggtgaattagtggaggttccgatttcgatgggagtagcttcaaagaagaagggtcgtccgcttggacgccgggctaaacagttacaatctccaaagaaagcggaaggtaatgatgttggtgtggatttatgctccaacttgaatgggaaggagcttcttattcacgaagataaccaaaatcattggggtgaagaaggtggtttcagcatgggccctaagactctgaatgaccaacaaagtgagtaccctaaggactgggcggtggaaaagcaattggaatcacgacctccatctggtccacatgttagaacttctgccataacaggagtcggcttgcaagagttgttagagctcattgatgagaaactgaaaatcccaaatgttctggaaaagggtgtatttgatcgaaaatggaggccctctcgtacagaggaggcgggtctagcagttgaacaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0043021 GO:0043022 GO:0044424 GO:0044464 GO:0044877
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GTP-bdg_M GTP-bdg_N MMR_HSR1

Protein Analysis

396

Amino Acids

43.63

Weight (kDa)

7.12

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 107
AccB7I CCANNNNNTGG 1 cut(s) 57
AccII CGCG 1 cut(s) 228
AclWI GGATC 4 cut(s) 76, 285, 286, 299
AcoI YGGCCR 1 cut(s) 424
AcsI RAATTY 1 cut(s) 722
AcyI GRCGYC 1 cut(s) 799
AfaI GTAC 2 cut(s) 977, 1159
AfiI CCNNNNNNNGG 6 cut(s) 57, 91, 121, 446, 665, 1025
AflIII ACRYGT 1 cut(s) 1033
AgeI ACCGGT 1 cut(s) 352
AgsI TTSAA 4 cut(s) 67, 774, 874, 1184
AjnI CCWGG 1 cut(s) 608
AluBI AGCT 3 cut(s) 770, 886, 1084
AluI AGCT 3 cut(s) 770, 886, 1084
Alw21I GWGCWC 1 cut(s) 1086
Alw26I GTCTC 1 cut(s) 325
AlwI GGATC 4 cut(s) 76, 285, 286, 299
AoxI GGCC 4 cut(s) 424, 606, 943, 1148
ApaI GGGCCC 1 cut(s) 947
ApoI RAATTY 1 cut(s) 722
AsiGI ACCGGT 1 cut(s) 352
AspLEI GCGC 1 cut(s) 230
AspS9I GGNCC 6 cut(s) 437, 606, 943, 944, 1028, 1149
AsuC2I CCSGG 2 cut(s) 486, 803
AsuHPI GGTGA 9 cut(s) 145, 342, 376, 382, 490, 503, 560, 746, 932
AvaII GGWCC 2 cut(s) 437, 1028
AxyI CCTNAGG 1 cut(s) 981
BaeGI GKGCMC 1 cut(s) 947
BalI TGGCCA 1 cut(s) 426
BamHI GGATCC 1 cut(s) 291
BanII GRGCYC 2 cut(s) 947, 1086
BbsI GAAGAC 1 cut(s) 103
Bbv12I GWGCWC 1 cut(s) 1086
BccI CCATC 4 cut(s) 121, 361, 754, 1030
BciT130I CCWGG 1 cut(s) 610
BclI TGATCA 1 cut(s) 253
BcnI CCSGG 2 cut(s) 486, 803
BcoDI GTCTC 1 cut(s) 325
BfaI CTAG 2 cut(s) 699, 1175
BisI GCNGC 2 cut(s) 42, 408
BlsI GCNGC 2 cut(s) 43, 409
Bme1390I CCNGG 3 cut(s) 486, 610, 803
Bme18I GGWCC 2 cut(s) 437, 1028
BmgT120I GGNCC 6 cut(s) 437, 606, 943, 944, 1028, 1149
BmiI GGNNCC 4 cut(s) 12, 293, 750, 945
BmrFI CCNGG 3 cut(s) 486, 610, 803
BmrI ACTGGG 2 cut(s) 740, 997
BmsI GCATC 3 cut(s) 183, 471, 634
BmuI ACTGGG 2 cut(s) 740, 997
BpiI GAAGAC 1 cut(s) 103
BplI GAGNNNNNCTC 2 cut(s) 1138, 1170
BpmI CTGGAG 2 cut(s) 492, 702
BpuEI CTTGAG 1 cut(s) 176
BpuMI CCSGG 2 cut(s) 486, 803
BsaHI GRCGYC 1 cut(s) 799
BsaJI CCNNGG 3 cut(s) 394, 427, 609
BsaWI WCCGGW 1 cut(s) 352
Bsc4I CCNNNNNNNGG 6 cut(s) 57, 91, 121, 446, 665, 1025
Bse118I RCCGGY 2 cut(s) 13, 352
Bse1I ACTGG 4 cut(s) 509, 550, 735, 992
Bse21I CCTNAGG 1 cut(s) 981
BseBI CCWGG 1 cut(s) 610
BseDI CCNNGG 3 cut(s) 394, 427, 609
BseGI GGATG 1 cut(s) 103
BseLI CCNNNNNNNGG 6 cut(s) 57, 91, 121, 446, 665, 1025
BseMII CTCAG 1 cut(s) 588
BseNI ACTGG 4 cut(s) 509, 550, 735, 992
BseRI GAGGAG 4 cut(s) 107, 509, 551, 1178
BseSI GKGCMC 1 cut(s) 947
BseYI CCCAGC 1 cut(s) 635
BsgI GTGCAG 1 cut(s) 287
Bsh1236I CGCG 1 cut(s) 228
BshFI GGCC 4 cut(s) 426, 608, 945, 1150
BshTI ACCGGT 1 cut(s) 352
BsiHKAI GWGCWC 1 cut(s) 1086
BsiSI CCGG 5 cut(s) 14, 316, 353, 485, 802
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 6 cut(s) 57, 91, 121, 446, 665, 1025
BsmAI GTCTC 1 cut(s) 325
BsmBI CGTCTC 1 cut(s) 325
BsmFI GGGAC 1 cut(s) 251
BsnI GGCC 4 cut(s) 426, 608, 945, 1150
Bsp120I GGGCCC 1 cut(s) 943
Bsp1286I GDGCHC 2 cut(s) 947, 1086
Bsp143I GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
Bsp19I CCATGG 2 cut(s) 394, 427
BspANI GGCC 4 cut(s) 426, 608, 945, 1150
BspCNI CTCAG 1 cut(s) 587
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 1 cut(s) 304
BspLI GGNNCC 4 cut(s) 12, 293, 750, 945
BspPI GGATC 4 cut(s) 76, 285, 286, 299
BsrFI RCCGGY 2 cut(s) 13, 352
BsrI ACTGG 4 cut(s) 509, 550, 735, 992
BssAI RCCGGY 2 cut(s) 13, 352
BssECI CCNNGG 3 cut(s) 394, 427, 609
BssMI GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
BssNI GRCGYC 1 cut(s) 799
BssT1I CCWWGG 2 cut(s) 394, 427
Bst2UI CCWGG 1 cut(s) 610
Bst4CI ACNGT 2 cut(s) 565, 813
BstACI GRCGYC 1 cut(s) 799
BstC8I GCNNGC 2 cut(s) 15, 1067
BstDEI CTNAG 3 cut(s) 574, 948, 981
BstDSI CCRYGG 2 cut(s) 394, 427
BstF5I GGATG 1 cut(s) 103
BstFNI CGCG 1 cut(s) 228
BstHHI GCGC 1 cut(s) 230
BstKTI GATC 6 cut(s) 48, 84, 256, 280, 294, 1138
BstMAI GTCTC 1 cut(s) 325
BstMBI GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
BstMWI GCNNNNNNNGC 4 cut(s) 464, 481, 614, 1175
BstNI CCWGG 1 cut(s) 610
BstNSI RCATGY 1 cut(s) 1037
BstSCI CCNGG 3 cut(s) 484, 608, 801
BstSLI GKGCMC 1 cut(s) 947
BstUI CGCG 1 cut(s) 228
BstV2I GAAGAC 1 cut(s) 103
BstX2I RGATCY 1 cut(s) 291
BstYI RGATCY 1 cut(s) 291
Bsu36I CCTNAGG 1 cut(s) 981
BsuRI GGCC 4 cut(s) 426, 608, 945, 1150
BtgI CCRYGG 2 cut(s) 394, 427
BtgZI GCGATG 1 cut(s) 206
BtsCI GGATG 1 cut(s) 103
BtsI GCAGTG 1 cut(s) 237
BtsIMutI CAGTG 2 cut(s) 237, 516
Cac8I GCNNGC 2 cut(s) 15, 1067
CciI TCATGA 1 cut(s) 304
CfoI GCGC 1 cut(s) 230
Cfr10I RCCGGY 2 cut(s) 13, 352
Cfr13I GGNCC 6 cut(s) 437, 606, 943, 944, 1028, 1149
CseI GACGC 2 cut(s) 234, 807
Csp6I GTAC 2 cut(s) 976, 1158
CspAI ACCGGT 1 cut(s) 352
CviAII CATG 7 cut(s) 296, 305, 395, 428, 441, 940, 1034
CviQI GTAC 2 cut(s) 976, 1158
DdeI CTNAG 3 cut(s) 574, 948, 981
DpnI GATC 6 cut(s) 47, 83, 255, 279, 293, 1137
DpnII GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
DraI TTTAAA 1 cut(s) 694
DrdI GACNNNNNNGTC 1 cut(s) 107
DseDI GACNNNNNNGTC 1 cut(s) 107
EaeI YGGCCR 1 cut(s) 424
Ecl136II GAGCTC 1 cut(s) 1084
Eco130I CCWWGG 2 cut(s) 394, 427
Eco24I GRGCYC 2 cut(s) 947, 1086
Eco47I GGWCC 2 cut(s) 437, 1028
Eco53kI GAGCTC 1 cut(s) 1084
Eco81I CCTNAGG 1 cut(s) 981
EcoICRI GAGCTC 1 cut(s) 1084
EcoO109I RGGNCCY 2 cut(s) 944, 1149
EcoRI GAATTC 1 cut(s) 722
EcoRII CCWGG 1 cut(s) 608
EcoT14I CCWWGG 2 cut(s) 394, 427
EcoT38I GRGCYC 2 cut(s) 947, 1086
ErhI CCWWGG 2 cut(s) 394, 427
Esp3I CGTCTC 1 cut(s) 325
FaeI CATG 7 cut(s) 299, 308, 398, 431, 444, 943, 1037
FaqI GGGAC 1 cut(s) 251
FatI CATG 7 cut(s) 295, 304, 394, 427, 440, 939, 1033
FauI CCCGC 1 cut(s) 1162
FbaI TGATCA 1 cut(s) 253
Fnu4HI GCNGC 2 cut(s) 42, 408
FokI GGATG 1 cut(s) 110
FriOI GRGCYC 2 cut(s) 947, 1086
Fsp4HI GCNGC 2 cut(s) 42, 408
FspBI CTAG 2 cut(s) 699, 1175
GlaI GCGC 1 cut(s) 229
GluI GCNGC 2 cut(s) 42, 408
GsaI CCCAGC 1 cut(s) 639
GsuI CTGGAG 2 cut(s) 492, 702
HaeIII GGCC 4 cut(s) 426, 608, 945, 1150
HapII CCGG 5 cut(s) 14, 316, 353, 485, 802
HgaI GACGC 2 cut(s) 234, 807
HhaI GCGC 1 cut(s) 230
Hin1I GRCGYC 1 cut(s) 799
Hin1II CATG 7 cut(s) 299, 308, 398, 431, 444, 943, 1037
Hin6I GCGC 1 cut(s) 228
HinP1I GCGC 1 cut(s) 228
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HinfI GANTC 5 cut(s) 139, 301, 952, 1010, 1059
HpaII CCGG 5 cut(s) 14, 316, 353, 485, 802
HphI GGTGA 9 cut(s) 145, 342, 376, 382, 490, 503, 560, 746, 932
Hpy166II GTNNAC 2 cut(s) 561, 1031
Hpy188I TCNGA 4 cut(s) 224, 577, 753, 957
Hpy188III TCNNGA 6 cut(s) 286, 305, 719, 896, 1014, 1118
Hpy8I GTNNAC 2 cut(s) 561, 1031
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 6 cut(s) 61, 444, 775, 830, 874, 920
HpyCH4III ACNGT 2 cut(s) 565, 813
HpyCH4V TGCA 3 cut(s) 268, 379, 1069
HpyF10VI GCNNNNNNNGC 4 cut(s) 464, 481, 614, 1175
HpyF3I CTNAG 3 cut(s) 574, 948, 981
Hsp92I GRCGYC 1 cut(s) 799
Hsp92II CATG 7 cut(s) 299, 308, 398, 431, 444, 943, 1037
HspAI GCGC 1 cut(s) 228
KroI GCCGGC 1 cut(s) 13
KroNI GCCGGC 1 cut(s) 15
Ksp22I TGATCA 1 cut(s) 253
Kzo9I GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
LmnI GCTCC 4 cut(s) 10, 614, 869, 883
LweI GCATC 3 cut(s) 183, 471, 634
MaeI CTAG 2 cut(s) 699, 1175
MaeIII GTNAC 3 cut(s) 180, 443, 813
MalI GATC 6 cut(s) 47, 83, 255, 279, 293, 1137
MboI GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
MboII GAAGA 6 cut(s) 103, 148, 663, 790, 911, 935
MfeI CAATTG 1 cut(s) 1004
MflI RGATCY 1 cut(s) 291
MhlI GDGCHC 2 cut(s) 947, 1086
MlsI TGGCCA 1 cut(s) 426
MluCI AATT 5 cut(s) 116, 708, 722, 737, 1004
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 2 cut(s) 946, 1068
MmeI TCCRAC 3 cut(s) 561, 751, 891
Mox20I TGGCCA 1 cut(s) 426
MroNI GCCGGC 1 cut(s) 13
MscI TGGCCA 1 cut(s) 426
MseI TTAA 3 cut(s) 120, 212, 693
MslI CAYNNNNRTG 1 cut(s) 918
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 1 cut(s) 518
MspI CCGG 5 cut(s) 14, 316, 353, 485, 802
MspR9I CCNGG 3 cut(s) 486, 610, 803
MunI CAATTG 1 cut(s) 1004
MvaI CCWGG 1 cut(s) 610
MvnI CGCG 1 cut(s) 228
MwoI GCNNNNNNNGC 4 cut(s) 464, 481, 614, 1175
NaeI GCCGGC 1 cut(s) 15
NciI CCSGG 2 cut(s) 486, 803
NcoI CCATGG 2 cut(s) 394, 427
NdeII GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
NgoMIV GCCGGC 1 cut(s) 13
NlaIII CATG 7 cut(s) 299, 308, 398, 431, 444, 943, 1037
NlaIV GGNNCC 4 cut(s) 12, 293, 750, 945
NmuCI GTSAC 1 cut(s) 443
NspI RCATGY 1 cut(s) 1037
PagI TCATGA 1 cut(s) 304
PciI ACATGT 1 cut(s) 1033
PdiI GCCGGC 1 cut(s) 15
PfeI GAWTC 3 cut(s) 139, 301, 1010
PflMI CCANNNNNTGG 1 cut(s) 57
PinAI ACCGGT 1 cut(s) 352
PkrI GCNGC 2 cut(s) 43, 409
PleI GAGTC 2 cut(s) 946, 1067
PpsI GAGTC 2 cut(s) 946, 1067
PscI ACATGT 1 cut(s) 1033
Psp124BI GAGCTC 1 cut(s) 1086
Psp6I CCWGG 1 cut(s) 608
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 1 cut(s) 608
PspN4I GGNNCC 4 cut(s) 12, 293, 750, 945
PspOMI GGGCCC 1 cut(s) 943
PspPI GGNCC 6 cut(s) 437, 606, 943, 944, 1028, 1149
PsuI RGATCY 1 cut(s) 291
RsaI GTAC 2 cut(s) 977, 1159
RsaNI GTAC 2 cut(s) 976, 1158
RseI CAYNNNNRTG 1 cut(s) 918
SacI GAGCTC 1 cut(s) 1086
SaqAI TTAA 3 cut(s) 120, 212, 693
SatI GCNGC 2 cut(s) 42, 408
Sau3AI GATC 6 cut(s) 45, 81, 253, 277, 291, 1135
Sau96I GGNCC 6 cut(s) 437, 606, 943, 944, 1028, 1149
SchI GAGTC 2 cut(s) 946, 1068
ScrFI CCNGG 3 cut(s) 486, 610, 803
SduI GDGCHC 2 cut(s) 947, 1086
SfaNI GCATC 3 cut(s) 183, 471, 634
SinI GGWCC 2 cut(s) 437, 1028
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
Sse9I AATT 5 cut(s) 116, 708, 722, 737, 1004
SspMI CTAG 2 cut(s) 699, 1175
SstI GAGCTC 1 cut(s) 1086
StyD4I CCNGG 3 cut(s) 484, 608, 801
StyI CCWWGG 2 cut(s) 394, 427
TaaI ACNGT 2 cut(s) 565, 813
TaqI TCGA 2 cut(s) 758, 1138
TasI AATT 5 cut(s) 116, 708, 722, 737, 1004
TauI GCSGC 2 cut(s) 44, 410
TfiI GAWTC 3 cut(s) 139, 301, 1010
Tru1I TTAA 3 cut(s) 120, 212, 693
Tru9I TTAA 3 cut(s) 120, 212, 693
TscAI CASTG 2 cut(s) 237, 516
TseFI GTSAC 1 cut(s) 443
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 2 cut(s) 293, 399
TspGWI ACGGA 3 cut(s) 349, 462, 476
TspRI CASTG 2 cut(s) 237, 516
Van91I CCANNNNNTGG 1 cut(s) 57
VpaK11BI GGWCC 2 cut(s) 437, 1028
XapI RAATTY 1 cut(s) 722
XceI RCATGY 1 cut(s) 1037
XspI CTAG 2 cut(s) 699, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.