Rmu_sc0006925.1_g000001

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006925.1
OG0000123
Physical Location & Seq
Reverse (-)
4301 .. 5183
883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006925.1_g000001.1.cds

Sequence Viewer

Length: 759 bp
atggcggaggagaacatggtggctccttctgcactttttgaggaggccattgtgagccttgttggaggagaggatgcaatccatgattcattcttatacattttgtggtcggatagtgaggtgaagaatcagattcccttaagcggtccatggttctacaacaactctatgttgctgctagcagactatgaccgcatttcaaatcttggggcggctcagctgcatttcttggaggtttgggtggcggtgaaggggttgcgcattgctatgcgcaatgagaaggccttaaccctaattagacgagcgttggattccttcgttcgggttgatcagggggtggtgcagcggaaggatccgattcagaggatccgtgtggtacaagacgttcggcggaggatttgggcgcgacggacctttcaattctctccgacggtctcgatgttggtggaactccagtatgaaaaatgtcatgggctatgtgaggcttgtggttttttttgtcatggtgagggtatatgtgatggcagattggaggcggaggcgcgcgctgcactggctctagcagtgtcagaccgcgaggtggaagcaaacccaagtgggttggcggcgtctgaagcggtggtttctgggtcagagatgctggtgacggtgggactaggtgcgccagaggtttctggggtggcggaagtggctggaacactggtgctaggattgggttcgccggccgcgaggagctctgtacgcgttcaggaaaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

252

Amino Acids

27.49

Weight (kDa)

5.13

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 260, 272
AccII CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
AclWI GGATC 4 cut(s) 347, 360, 361, 374
AcoI YGGCCR 1 cut(s) 723
AcuI CTGAAG 1 cut(s) 633
AcyI GRCGYC 1 cut(s) 608
AfaI GTAC 2 cut(s) 378, 741
AfiI CCNNNNNNNGG 3 cut(s) 143, 321, 580
AflII CTTAAG 1 cut(s) 139
AflIII ACRYGT 1 cut(s) 742
AgsI TTSAA 2 cut(s) 201, 419
AluBI AGCT 2 cut(s) 220, 735
AluI AGCT 2 cut(s) 220, 735
Alw21I GWGCWC 1 cut(s) 737
Alw26I GTCTC 1 cut(s) 439
AlwI GGATC 4 cut(s) 347, 360, 361, 374
AoxI GGCC 3 cut(s) 45, 282, 723
ApeKI GCWGC 4 cut(s) 175, 220, 343, 548
AspLEI GCGC 7 cut(s) 261, 273, 406, 544, 546, 548, 664
AspS9I GGNCC 2 cut(s) 146, 411
AsuHPI GGTGA 4 cut(s) 133, 259, 518, 655
AsuNHI GCTAGC 1 cut(s) 178
AvaII GGWCC 2 cut(s) 146, 411
BamHI GGATCC 2 cut(s) 352, 366
BanII GRGCYC 1 cut(s) 737
Bbv12I GWGCWC 1 cut(s) 737
BbvI GCAGC 4 cut(s) 162, 207, 355, 535
BccI CCATC 1 cut(s) 515
BclI TGATCA 1 cut(s) 328
BcoDI GTCTC 1 cut(s) 439
BfaI CTAG 4 cut(s) 179, 560, 656, 707
BfrI CTTAAG 1 cut(s) 139
BisI GCNGC 7 cut(s) 176, 213, 221, 344, 549, 606, 726
BlpI GCTNAGC 1 cut(s) 216
BlsI GCNGC 7 cut(s) 177, 214, 222, 345, 550, 607, 727
Bme18I GGWCC 2 cut(s) 146, 411
BmgT120I GGNCC 2 cut(s) 146, 411
BmiI GGNNCC 3 cut(s) 24, 354, 368
BmsI GCATC 2 cut(s) 64, 627
BmtI GCTAGC 1 cut(s) 182
BpmI CTGGAG 1 cut(s) 437
Bpu1102I GCTNAGC 1 cut(s) 216
BsaHI GRCGYC 1 cut(s) 608
BsaI GGTCTC 1 cut(s) 439
BsaJI CCNNGG 1 cut(s) 149
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 321, 580
Bse118I RCCGGY 1 cut(s) 721
Bse1I ACTGG 3 cut(s) 454, 558, 705
Bse3DI GCAATG 2 cut(s) 261, 280
BseDI CCNNGG 1 cut(s) 149
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 3 cut(s) 143, 321, 580
BseMI GCAATG 2 cut(s) 261, 280
BseMII CTCAG 1 cut(s) 230
BseNI ACTGG 3 cut(s) 454, 558, 705
BsePI GCGCGC 2 cut(s) 542, 544
BseRI GAGGAG 4 cut(s) 23, 56, 81, 745
BseX3I CGGCCG 1 cut(s) 723
BseXI GCAGC 4 cut(s) 162, 207, 355, 535
BsgI GTGCAG 3 cut(s) 15, 362, 534
Bsh1236I CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
Bsh1285I CGRYCG 1 cut(s) 726
BshFI GGCC 3 cut(s) 47, 284, 725
BsiEI CGRYCG 1 cut(s) 726
BsiHKAI GWGCWC 1 cut(s) 737
BsiSI CCGG 1 cut(s) 722
BslFI GGGAC 1 cut(s) 666
BslI CCNNNNNNNGG 3 cut(s) 143, 321, 580
BsmAI GTCTC 1 cut(s) 439
BsmFI GGGAC 1 cut(s) 666
BsnI GGCC 3 cut(s) 47, 284, 725
Bso31I GGTCTC 1 cut(s) 439
Bsp1286I GDGCHC 1 cut(s) 737
Bsp143I GATC 3 cut(s) 328, 352, 366
Bsp1720I GCTNAGC 1 cut(s) 216
Bsp19I CCATGG 1 cut(s) 149
BspANI GGCC 3 cut(s) 47, 284, 725
BspCNI CTCAG 1 cut(s) 229
BspFNI CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
BspLI GGNNCC 3 cut(s) 24, 354, 368
BspOI GCTAGC 1 cut(s) 182
BspPI GGATC 4 cut(s) 347, 360, 361, 374
BspTI CTTAAG 1 cut(s) 139
BspTNI GGTCTC 1 cut(s) 439
BsrDI GCAATG 2 cut(s) 261, 280
BsrFI RCCGGY 1 cut(s) 721
BsrI ACTGG 3 cut(s) 454, 558, 705
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 1 cut(s) 149
BssHII GCGCGC 2 cut(s) 542, 544
BssMI GATC 3 cut(s) 328, 352, 366
BssNI GRCGYC 1 cut(s) 608
BssT1I CCWWGG 1 cut(s) 149
Bst4CI ACNGT 2 cut(s) 433, 649
BstACI GRCGYC 1 cut(s) 608
BstAFI CTTAAG 1 cut(s) 139
BstC8I GCNNGC 4 cut(s) 180, 544, 546, 723
BstDEI CTNAG 1 cut(s) 216
BstDSI CCRYGG 1 cut(s) 149
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
BstHHI GCGC 7 cut(s) 261, 273, 406, 544, 546, 548, 664
BstKTI GATC 3 cut(s) 331, 355, 369
BstMAI GTCTC 1 cut(s) 439
BstMBI GATC 3 cut(s) 328, 352, 366
BstMCI CGRYCG 1 cut(s) 726
BstMWI GCNNNNNNNGC 6 cut(s) 29, 548, 554, 614, 689, 741
BstUI CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
BstV1I GCAGC 4 cut(s) 162, 207, 355, 535
BstX2I RGATCY 2 cut(s) 352, 366
BstYI RGATCY 2 cut(s) 352, 366
BstZI CGGCCG 1 cut(s) 723
BsuRI GGCC 3 cut(s) 47, 284, 725
BtgI CCRYGG 1 cut(s) 149
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 570
BtsIMutI CAGTG 3 cut(s) 551, 570, 698
Cac8I GCNNGC 4 cut(s) 180, 544, 546, 723
CfoI GCGC 7 cut(s) 261, 273, 406, 544, 546, 548, 664
Cfr10I RCCGGY 1 cut(s) 721
Cfr13I GGNCC 2 cut(s) 146, 411
CseI GACGC 1 cut(s) 597
Csp6I GTAC 2 cut(s) 377, 740
CviAII CATG 5 cut(s) 16, 83, 150, 470, 503
CviQI GTAC 2 cut(s) 377, 740
DdeI CTNAG 1 cut(s) 216
DpnI GATC 3 cut(s) 330, 354, 368
DpnII GATC 3 cut(s) 328, 352, 366
EaeI YGGCCR 1 cut(s) 723
EagI CGGCCG 1 cut(s) 723
EciI GGCGGA 4 cut(s) 20, 406, 551, 698
Ecl136II GAGCTC 1 cut(s) 735
EclXI CGGCCG 1 cut(s) 723
Eco130I CCWWGG 1 cut(s) 149
Eco147I AGGCCT 1 cut(s) 284
Eco24I GRGCYC 1 cut(s) 737
Eco31I GGTCTC 1 cut(s) 439
Eco47I GGWCC 2 cut(s) 146, 411
Eco52I CGGCCG 1 cut(s) 723
Eco53kI GAGCTC 1 cut(s) 735
Eco57I CTGAAG 1 cut(s) 633
EcoICRI GAGCTC 1 cut(s) 735
EcoT14I CCWWGG 1 cut(s) 149
EcoT38I GRGCYC 1 cut(s) 737
ErhI CCWWGG 1 cut(s) 149
FaeI CATG 5 cut(s) 19, 86, 153, 473, 506
FaqI GGGAC 1 cut(s) 666
FatI CATG 5 cut(s) 15, 82, 149, 469, 502
FbaI TGATCA 1 cut(s) 328
Fnu4HI GCNGC 7 cut(s) 176, 213, 221, 344, 549, 606, 726
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 1 cut(s) 737
Fsp4HI GCNGC 7 cut(s) 176, 213, 221, 344, 549, 606, 726
FspBI CTAG 4 cut(s) 179, 560, 656, 707
FspI TGCGCA 2 cut(s) 260, 272
GlaI GCGC 7 cut(s) 260, 272, 405, 543, 545, 547, 663
GluI GCNGC 7 cut(s) 176, 213, 221, 344, 549, 606, 726
GsuI CTGGAG 1 cut(s) 437
HaeIII GGCC 3 cut(s) 47, 284, 725
HapII CCGG 1 cut(s) 722
HgaI GACGC 1 cut(s) 597
HhaI GCGC 7 cut(s) 261, 273, 406, 544, 546, 548, 664
Hin1I GRCGYC 1 cut(s) 608
Hin1II CATG 5 cut(s) 19, 86, 153, 473, 506
Hin6I GCGC 7 cut(s) 259, 271, 404, 542, 544, 546, 662
HinP1I GCGC 7 cut(s) 259, 271, 404, 542, 544, 546, 662
HinfI GANTC 5 cut(s) 86, 127, 133, 311, 358
HpaII CCGG 1 cut(s) 722
HphI GGTGA 4 cut(s) 133, 259, 518, 655
Hpy188I TCNGA 8 cut(s) 112, 132, 357, 363, 429, 571, 613, 634
Hpy188III TCNNGA 2 cut(s) 436, 749
Hpy99I CGWCG 2 cut(s) 411, 433
HpyAV CCTTC 5 cut(s) 36, 244, 274, 325, 343
HpyCH4III ACNGT 2 cut(s) 433, 649
HpyCH4IV ACGT 1 cut(s) 384
HpyCH4V TGCA 5 cut(s) 32, 77, 223, 343, 551
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 548, 554, 614, 689, 741
HpyF3I CTNAG 1 cut(s) 216
HpySE526I ACGT 1 cut(s) 384
Hsp92I GRCGYC 1 cut(s) 608
Hsp92II CATG 5 cut(s) 19, 86, 153, 473, 506
HspAI GCGC 7 cut(s) 259, 271, 404, 542, 544, 546, 662
KroI GCCGGC 1 cut(s) 721
KroNI GCCGGC 1 cut(s) 723
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 3 cut(s) 328, 352, 366
LmnI GCTCC 2 cut(s) 28, 732
Lsp1109I GCAGC 4 cut(s) 162, 207, 355, 535
LweI GCATC 2 cut(s) 64, 627
MaeI CTAG 4 cut(s) 179, 560, 656, 707
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 1 cut(s) 643
MalI GATC 3 cut(s) 330, 354, 368
MboI GATC 3 cut(s) 328, 352, 366
MboII GAAGA 1 cut(s) 136
MflI RGATCY 2 cut(s) 352, 366
MhlI GDGCHC 1 cut(s) 737
MluCI AATT 3 cut(s) 294, 419, 754
MluI ACGCGT 1 cut(s) 742
MmeI TCCRAC 4 cut(s) 43, 90, 288, 452
MroNI GCCGGC 1 cut(s) 721
MseI TTAA 2 cut(s) 140, 287
MslI CAYNNNNRTG 1 cut(s) 266
MspA1I CMGCKG 2 cut(s) 220, 346
MspCI CTTAAG 1 cut(s) 139
MspI CCGG 1 cut(s) 722
MvnI CGCG 6 cut(s) 406, 544, 546, 576, 728, 744
MwoI GCNNNNNNNGC 6 cut(s) 29, 548, 554, 614, 689, 741
NaeI GCCGGC 1 cut(s) 723
NcoI CCATGG 1 cut(s) 149
NdeII GATC 3 cut(s) 328, 352, 366
NgoMIV GCCGGC 1 cut(s) 721
NheI GCTAGC 1 cut(s) 178
NlaIII CATG 5 cut(s) 19, 86, 153, 473, 506
NlaIV GGNNCC 3 cut(s) 24, 354, 368
NmuCI GTSAC 1 cut(s) 643
NsbI TGCGCA 2 cut(s) 260, 272
PauI GCGCGC 2 cut(s) 542, 544
PceI AGGCCT 1 cut(s) 284
PcsI WCGNNNNNNNCGW 1 cut(s) 725
PdiI GCCGGC 1 cut(s) 723
PfeI GAWTC 5 cut(s) 86, 127, 133, 311, 358
PkrI GCNGC 7 cut(s) 177, 214, 222, 345, 550, 607, 727
Psp124BI GAGCTC 1 cut(s) 737
PspN4I GGNNCC 3 cut(s) 24, 354, 368
PspPI GGNCC 2 cut(s) 146, 411
PsrI GAACNNNNNNTAC 2 cut(s) 369, 401
PsuI RGATCY 2 cut(s) 352, 366
PteI GCGCGC 2 cut(s) 542, 544
PvuII CAGCTG 1 cut(s) 220
RsaI GTAC 2 cut(s) 378, 741
RsaNI GTAC 2 cut(s) 377, 740
RseI CAYNNNNRTG 1 cut(s) 266
SacI GAGCTC 1 cut(s) 737
SaqAI TTAA 2 cut(s) 140, 287
SatI GCNGC 7 cut(s) 176, 213, 221, 344, 549, 606, 726
Sau3AI GATC 3 cut(s) 328, 352, 366
Sau96I GGNCC 2 cut(s) 146, 411
SduI GDGCHC 1 cut(s) 737
SetI ASST 9 cut(s) 123, 222, 237, 387, 416, 582, 661, 672, 737
SfaNI GCATC 2 cut(s) 64, 627
SinI GGWCC 2 cut(s) 146, 411
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
Sse9I AATT 3 cut(s) 294, 419, 754
SseBI AGGCCT 1 cut(s) 284
SspMI CTAG 4 cut(s) 179, 560, 656, 707
SstI GAGCTC 1 cut(s) 737
StuI AGGCCT 1 cut(s) 284
StyI CCWWGG 1 cut(s) 149
TaaI ACNGT 2 cut(s) 433, 649
TaiI ACGT 1 cut(s) 387
TaqI TCGA 1 cut(s) 437
TasI AATT 3 cut(s) 294, 419, 754
TauI GCSGC 3 cut(s) 215, 608, 728
TfiI GAWTC 5 cut(s) 86, 127, 133, 311, 358
Tru1I TTAA 2 cut(s) 140, 287
Tru9I TTAA 2 cut(s) 140, 287
TscAI CASTG 3 cut(s) 558, 570, 705
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 4 cut(s) 175, 220, 343, 548
Tsp45I GTSAC 1 cut(s) 643
TspDTI ATGAA 2 cut(s) 78, 474
TspGWI ACGGA 2 cut(s) 359, 424
TspRI CASTG 3 cut(s) 558, 570, 705
Vha464I CTTAAG 1 cut(s) 139
VpaK11BI GGWCC 2 cut(s) 146, 411
XspI CTAG 4 cut(s) 179, 560, 656, 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.