Rmu_sc0003930.1_g000009

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003930.1
OG0000123
Physical Location & Seq
Forward (+)
38242 .. 40512
2271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003930.1_g000009.1.cds

Sequence Viewer

Length: 927 bp
atggtagtagcaatagcatcgaagggtgcagcagcatctgtcaccttgtcgaaagaagccatagtgaacctggttgggggaggggatgttatccacaacccattcttttacctgtgtgggcgttcgctatccaagaacctgatggttattccgtcgttctcggcagcgatgtcctgcatgtggcggctaaatgaaagggttttgatccgcaaaaaagacgaggggatcttcgtgctccaattcaaggagcaggaggtgaagcaccaggttctttatggaggcccatggtattacaataactcgatgctattattggcatattatgatggtgttaaggcactggcaaaggttcctttgctttccttggaggtgtgggtggcggtgaagggtctgagagtggccatgcgcaatgatcaggctcttacccggcttgtcaatgcgttaattcatgacgtgcgccgacgggtcttggctcggcatacgttctgcttcttgccggaggtttctgtggaccttgagctttgttatgaaaagtgtcggggaatttgcaagggatgtggtttcttcacccatggtggcaaggagagtgaccaaaagctggtggaggacgaggccgtggttctgacgtgggacattgtgcagcagaaggtggtcccacagtcgaatgctatggtgaccagtctgggaattgttgggtgtggctggcttcatggagttaggacctttactgctgatttgtttggatacccatctagggttttggggatgagaaggcttcttgaggaggaatggctcgaggatggaaagcctcttaagctttctgatgccttaattgaggtaccagtaaccaatgggaagattccgaagaagaagggcagacctcgtggtcaccggaacaagcccaagcttgcgtctacaccctcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

308

Amino Acids

34.34

Weight (kDa)

9.4

Isoelectric Point (pI)

34.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 885
Acc16I TGCGCA 1 cut(s) 407
Acc65I GGTACC 1 cut(s) 838
AccB1I GGYRCC 1 cut(s) 838
AccB7I CCANNNNNTGG 1 cut(s) 598
AccI GTMKAC 1 cut(s) 914
AciI CCGC 3 cut(s) 184, 208, 380
AclWI GGATC 2 cut(s) 199, 233
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 1 cut(s) 543
AfaI GTAC 1 cut(s) 840
AfiI CCNNNNNNNGG 5 cut(s) 76, 180, 244, 598, 754
AflII CTTAAG 1 cut(s) 812
AgsI TTSAA 1 cut(s) 244
AjiI CACGTC 2 cut(s) 454, 627
AjnI CCWGG 2 cut(s) 69, 264
AluBI AGCT 4 cut(s) 520, 598, 817, 907
AluI AGCT 4 cut(s) 520, 598, 817, 907
Alw21I GWGCWC 1 cut(s) 237
AlwI GGATC 2 cut(s) 199, 233
AlwNI CAGNNNCTG 1 cut(s) 38
Ama87I CYCGRG 1 cut(s) 794
AoxI GGCC 3 cut(s) 280, 399, 612
ApeKI GCWGC 4 cut(s) 29, 32, 164, 640
ApoI RAATTY 1 cut(s) 543
Asp718I GGTACC 1 cut(s) 838
AspLEI GCGC 2 cut(s) 408, 459
AspS9I GGNCC 4 cut(s) 281, 511, 652, 720
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 6 cut(s) 34, 268, 394, 559, 685, 881
AvaI CYCGRG 1 cut(s) 794
AvaII GGWCC 3 cut(s) 511, 652, 720
BalI TGGCCA 1 cut(s) 401
BanI GGYRCC 1 cut(s) 838
BauI CACGAG 1 cut(s) 882
Bbv12I GWGCWC 1 cut(s) 237
BbvI GCAGC 4 cut(s) 41, 44, 176, 652
BccI CCATC 4 cut(s) 136, 320, 757, 794
BceAI ACGGC 1 cut(s) 599
BcgI CGANNNNNNTGC 1 cut(s) 34
BciT130I CCWGG 2 cut(s) 71, 266
BciVI GTATCC 1 cut(s) 737
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 1 cut(s) 427
BfaI CTAG 1 cut(s) 753
BfrI CTTAAG 1 cut(s) 812
BfuI GTATCC 1 cut(s) 737
BisI GCNGC 5 cut(s) 30, 33, 165, 185, 641
BlsI GCNGC 5 cut(s) 31, 34, 166, 186, 642
Bme1390I CCNGG 3 cut(s) 71, 266, 427
Bme18I GGWCC 3 cut(s) 511, 652, 720
BmeT110I CYCGRG 1 cut(s) 794
BmgBI CACGTC 2 cut(s) 454, 627
BmgT120I GGNCC 4 cut(s) 281, 511, 652, 720
BmiI GGNNCC 3 cut(s) 351, 654, 840
BmrFI CCNGG 3 cut(s) 71, 266, 427
BmsI GCATC 4 cut(s) 26, 44, 294, 814
BpuEI CTTGAG 2 cut(s) 536, 800
BpuMI CCSGG 1 cut(s) 427
BsaBI GATNNNNATC 1 cut(s) 748
BsaJI CCNNGG 4 cut(s) 284, 363, 571, 615
BsaWI WCCGGW 1 cut(s) 891
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 180, 244, 598, 754
Bse1I ACTGG 3 cut(s) 345, 678, 842
Bse3DI GCAATG 1 cut(s) 415
Bse8I GATNNNNATC 1 cut(s) 748
BseBI CCWGG 2 cut(s) 71, 266
BseDI CCNNGG 4 cut(s) 284, 363, 571, 615
BseGI GGATG 4 cut(s) 91, 560, 771, 805
BseJI GATNNNNATC 1 cut(s) 748
BseLI CCNNNNNNNGG 5 cut(s) 76, 180, 244, 598, 754
BseMI GCAATG 1 cut(s) 415
BseMII CTCAG 1 cut(s) 383
BseNI ACTGG 3 cut(s) 345, 678, 842
BseRI GAGGAG 1 cut(s) 797
BseXI GCAGC 4 cut(s) 41, 44, 176, 652
BsgI GTGCAG 2 cut(s) 48, 659
BshFI GGCC 3 cut(s) 282, 401, 614
BshNI GGYRCC 1 cut(s) 838
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 1 cut(s) 794
BsiSI CCGG 3 cut(s) 427, 497, 892
BslFI GGGAC 2 cut(s) 638, 644
BslI CCNNNNNNNGG 5 cut(s) 76, 180, 244, 598, 754
BsmFI GGGAC 2 cut(s) 638, 644
BsmI GAATGC 1 cut(s) 670
BsnI GGCC 3 cut(s) 282, 401, 614
BsoBI CYCGRG 1 cut(s) 794
Bsp1286I GDGCHC 1 cut(s) 237
Bsp143I GATC 3 cut(s) 204, 225, 412
Bsp19I CCATGG 2 cut(s) 284, 571
BspACI CCGC 3 cut(s) 184, 208, 380
BspANI GGCC 3 cut(s) 282, 401, 614
BspCNI CTCAG 1 cut(s) 384
BspHI TCATGA 1 cut(s) 448
BspLI GGNNCC 3 cut(s) 351, 654, 840
BspPI GGATC 2 cut(s) 199, 233
BspT107I GGYRCC 1 cut(s) 838
BspTI CTTAAG 1 cut(s) 812
BsrDI GCAATG 1 cut(s) 415
BsrI ACTGG 3 cut(s) 345, 678, 842
BssECI CCNNGG 4 cut(s) 284, 363, 571, 615
BssMI GATC 3 cut(s) 204, 225, 412
BssSI CACGAG 1 cut(s) 882
BssT1I CCWWGG 3 cut(s) 284, 363, 571
Bst2BI CACGAG 1 cut(s) 882
Bst2UI CCWGG 2 cut(s) 71, 266
Bst4CI ACNGT 1 cut(s) 660
BstAFI CTTAAG 1 cut(s) 812
BstC8I GCNNGC 2 cut(s) 704, 909
BstDEI CTNAG 1 cut(s) 392
BstDSI CCRYGG 3 cut(s) 284, 571, 615
BstEII GGTNACC 2 cut(s) 673, 887
BstF5I GGATG 4 cut(s) 91, 560, 771, 805
BstHHI GCGC 2 cut(s) 408, 459
BstKTI GATC 3 cut(s) 207, 228, 415
BstMBI GATC 3 cut(s) 204, 225, 412
BstMWI GCNNNNNNNGC 1 cut(s) 814
BstNI CCWGG 2 cut(s) 71, 266
BstNSI RCATGY 1 cut(s) 181
BstPI GGTNACC 2 cut(s) 673, 887
BstSCI CCNGG 3 cut(s) 69, 264, 425
BstV1I GCAGC 4 cut(s) 41, 44, 176, 652
BstX2I RGATCY 1 cut(s) 225
BstYI RGATCY 1 cut(s) 225
BsuI GTATCC 1 cut(s) 737
BsuRI GGCC 3 cut(s) 282, 401, 614
BtgI CCRYGG 3 cut(s) 284, 571, 615
BtgZI GCGATG 1 cut(s) 182
BtrI CACGTC 2 cut(s) 454, 627
BtsCI GGATG 4 cut(s) 91, 560, 771, 805
BtsIMutI CAGTG 1 cut(s) 338
Cac8I GCNNGC 2 cut(s) 704, 909
CaiI CAGNNNCTG 1 cut(s) 38
CciI TCATGA 1 cut(s) 448
CfoI GCGC 2 cut(s) 408, 459
Cfr13I GGNCC 4 cut(s) 281, 511, 652, 720
CseI GACGC 1 cut(s) 900
CsiI ACCWGGT 2 cut(s) 69, 264
Csp6I GTAC 1 cut(s) 839
CspCI CAANNNNNGTGG 2 cut(s) 538, 573
CviAII CATG 6 cut(s) 178, 285, 403, 449, 572, 710
CviQI GTAC 1 cut(s) 839
DdeI CTNAG 1 cut(s) 392
DpnI GATC 3 cut(s) 206, 227, 414
DpnII GATC 3 cut(s) 204, 225, 412
DrdI GACNNNNNNGTC 1 cut(s) 885
DseDI GACNNNNNNGTC 1 cut(s) 885
EaeI YGGCCR 1 cut(s) 399
Eco130I CCWWGG 3 cut(s) 284, 363, 571
Eco47I GGWCC 3 cut(s) 511, 652, 720
Eco88I CYCGRG 1 cut(s) 794
Eco91I GGTNACC 2 cut(s) 673, 887
EcoO109I RGGNCCY 1 cut(s) 720
EcoO65I GGTNACC 2 cut(s) 673, 887
EcoRII CCWGG 2 cut(s) 69, 264
EcoT14I CCWWGG 3 cut(s) 284, 363, 571
ErhI CCWWGG 3 cut(s) 284, 363, 571
FaeI CATG 6 cut(s) 181, 288, 406, 452, 575, 713
FaqI GGGAC 2 cut(s) 638, 644
FatI CATG 6 cut(s) 177, 284, 402, 448, 571, 709
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 914
Fnu4HI GCNGC 5 cut(s) 30, 33, 165, 185, 641
FokI GGATG 4 cut(s) 98, 567, 778, 812
Fsp4HI GCNGC 5 cut(s) 30, 33, 165, 185, 641
FspBI CTAG 1 cut(s) 753
FspI TGCGCA 1 cut(s) 407
GlaI GCGC 2 cut(s) 407, 458
GluI GCNGC 5 cut(s) 30, 33, 165, 185, 641
HaeIII GGCC 3 cut(s) 282, 401, 614
HapII CCGG 3 cut(s) 427, 497, 892
HgaI GACGC 1 cut(s) 900
HhaI GCGC 2 cut(s) 408, 459
Hin1II CATG 6 cut(s) 181, 288, 406, 452, 575, 713
Hin6I GCGC 2 cut(s) 406, 457
HinP1I GCGC 2 cut(s) 406, 457
HindIII AAGCTT 2 cut(s) 815, 905
HinfI GANTC 1 cut(s) 859
HpaII CCGG 3 cut(s) 427, 497, 892
HphI GGTGA 6 cut(s) 34, 268, 394, 559, 685, 881
Hpy166II GTNNAC 3 cut(s) 67, 511, 915
Hpy188I TCNGA 4 cut(s) 393, 624, 823, 864
Hpy188III TCNNGA 3 cut(s) 449, 779, 924
Hpy8I GTNNAC 3 cut(s) 67, 511, 915
Hpy99I CGWCG 2 cut(s) 157, 465
HpyAV CCTTC 5 cut(s) 16, 379, 640, 765, 865
HpyCH4III ACNGT 1 cut(s) 660
HpyCH4IV ACGT 3 cut(s) 453, 482, 626
HpyCH4V TGCA 4 cut(s) 29, 177, 549, 640
HpyF10VI GCNNNNNNNGC 1 cut(s) 814
HpyF3I CTNAG 1 cut(s) 392
HpySE526I ACGT 3 cut(s) 453, 482, 626
Hsp92II CATG 6 cut(s) 181, 288, 406, 452, 575, 713
HspAI GCGC 2 cut(s) 406, 457
KpnI GGTACC 1 cut(s) 842
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 3 cut(s) 204, 225, 412
LmnI GCTCC 2 cut(s) 240, 247
Lsp1109I GCAGC 4 cut(s) 41, 44, 176, 652
LweI GCATC 4 cut(s) 26, 44, 294, 814
MabI ACCWGGT 2 cut(s) 69, 264
MaeI CTAG 1 cut(s) 753
MaeII ACGT 3 cut(s) 453, 482, 626
MaeIII GTNAC 5 cut(s) 40, 587, 673, 844, 887
MalI GATC 3 cut(s) 206, 227, 414
MboI GATC 3 cut(s) 204, 225, 412
MboII GAAGA 5 cut(s) 220, 556, 868, 877, 880
MflI RGATCY 1 cut(s) 225
MhlI GDGCHC 1 cut(s) 237
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 5 cut(s) 239, 444, 543, 687, 831
MluNI TGGCCA 1 cut(s) 401
Mox20I TGGCCA 1 cut(s) 401
MscI TGGCCA 1 cut(s) 401
MseI TTAA 4 cut(s) 333, 443, 813, 830
Msp20I TGGCCA 1 cut(s) 401
MspCI CTTAAG 1 cut(s) 812
MspI CCGG 3 cut(s) 427, 497, 892
MspR9I CCNGG 3 cut(s) 71, 266, 427
Mva1269I GAATGC 1 cut(s) 670
MvaI CCWGG 2 cut(s) 71, 266
MwoI GCNNNNNNNGC 1 cut(s) 814
NciI CCSGG 1 cut(s) 427
NcoI CCATGG 2 cut(s) 284, 571
NdeII GATC 3 cut(s) 204, 225, 412
NlaIII CATG 6 cut(s) 181, 288, 406, 452, 575, 713
NlaIV GGNNCC 3 cut(s) 351, 654, 840
NmeAIII GCCGAG 2 cut(s) 140, 454
NmuCI GTSAC 4 cut(s) 40, 587, 673, 887
NsbI TGCGCA 1 cut(s) 407
NspI RCATGY 1 cut(s) 181
PaeR7I CTCGAG 1 cut(s) 794
PagI TCATGA 1 cut(s) 448
PctI GAATGC 1 cut(s) 670
PfeI GAWTC 1 cut(s) 859
PflMI CCANNNNNTGG 1 cut(s) 598
PkrI GCNGC 5 cut(s) 31, 34, 166, 186, 642
PpuMI RGGWCCY 1 cut(s) 720
Psp5II RGGWCCY 1 cut(s) 720
Psp6I CCWGG 2 cut(s) 69, 264
PspEI GGTNACC 2 cut(s) 673, 887
PspGI CCWGG 2 cut(s) 69, 264
PspN4I GGNNCC 3 cut(s) 351, 654, 840
PspPI GGNCC 4 cut(s) 281, 511, 652, 720
PspPPI RGGWCCY 1 cut(s) 720
PspXI VCTCGAGB 1 cut(s) 794
PstNI CAGNNNCTG 1 cut(s) 38
PsuI RGATCY 1 cut(s) 225
RsaI GTAC 1 cut(s) 840
RsaNI GTAC 1 cut(s) 839
SaqAI TTAA 4 cut(s) 333, 443, 813, 830
SatI GCNGC 5 cut(s) 30, 33, 165, 185, 641
Sau3AI GATC 3 cut(s) 204, 225, 412
Sau96I GGNCC 4 cut(s) 281, 511, 652, 720
ScrFI CCNGG 3 cut(s) 71, 266, 427
SduI GDGCHC 1 cut(s) 237
SexAI ACCWGGT 2 cut(s) 69, 264
SfaNI GCATC 4 cut(s) 26, 44, 294, 814
Sfr274I CTCGAG 1 cut(s) 794
SinI GGWCC 3 cut(s) 511, 652, 720
SlaI CTCGAG 1 cut(s) 794
SmlI CTYRAG 4 cut(s) 515, 779, 794, 812
SmoI CTYRAG 4 cut(s) 515, 779, 794, 812
Sse9I AATT 5 cut(s) 239, 444, 543, 687, 831
SsiI CCGC 3 cut(s) 184, 208, 380
SspMI CTAG 1 cut(s) 753
StyD4I CCNGG 3 cut(s) 69, 264, 425
StyI CCWWGG 3 cut(s) 284, 363, 571
TaaI ACNGT 1 cut(s) 660
TaiI ACGT 3 cut(s) 456, 485, 629
TaqI TCGA 5 cut(s) 20, 50, 302, 662, 795
TasI AATT 5 cut(s) 239, 444, 543, 687, 831
TauI GCSGC 1 cut(s) 187
TfiI GAWTC 1 cut(s) 859
Tru1I TTAA 4 cut(s) 333, 443, 813, 830
Tru9I TTAA 4 cut(s) 333, 443, 813, 830
TscAI CASTG 1 cut(s) 345
TseFI GTSAC 4 cut(s) 40, 587, 673, 887
TseI GCWGC 4 cut(s) 29, 32, 164, 640
Tsp45I GTSAC 4 cut(s) 40, 587, 673, 887
TspDTI ATGAA 4 cut(s) 207, 437, 543, 698
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 1 cut(s) 345
Van91I CCANNNNNTGG 1 cut(s) 598
Vha464I CTTAAG 1 cut(s) 812
VpaK11BI GGWCC 3 cut(s) 511, 652, 720
XapI RAATTY 1 cut(s) 543
XceI RCATGY 1 cut(s) 181
XcmI CCANNNNNNNNNTGG 3 cut(s) 67, 139, 272
XhoI CTCGAG 1 cut(s) 794
XmiI GTMKAC 1 cut(s) 914
XspI CTAG 1 cut(s) 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.