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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 479 |
| Acc36I | ACCTGC | 1 cut(s) | 647 |
| AccB1I | GGYRCC | 1 cut(s) | 486 |
| AccII | CGCG | 1 cut(s) | 36 |
| AccIII | TCCGGA | 1 cut(s) | 162 |
| AciI | CCGC | 4 cut(s) | 34, 193, 278, 533 |
| AclWI | GGATC | 4 cut(s) | 112, 160, 173, 641 |
| AcuI | CTGAAG | 2 cut(s) | 46, 663 |
| AfaI | GTAC | 1 cut(s) | 661 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 169, 253, 254, 559, 656 |
| AflII | CTTAAG | 1 cut(s) | 557 |
| AgsI | TTSAA | 5 cut(s) | 8, 13, 128, 373, 497 |
| AjnI | CCWGG | 2 cut(s) | 247, 261 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 236, 268 |
| AluBI | AGCT | 4 cut(s) | 66, 235, 323, 528 |
| AluI | AGCT | 4 cut(s) | 66, 235, 323, 528 |
| Alw26I | GTCTC | 1 cut(s) | 124 |
| AlwI | GGATC | 4 cut(s) | 112, 160, 173, 641 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 326 |
| Aor13HI | TCCGGA | 1 cut(s) | 162 |
| AoxI | GGCC | 4 cut(s) | 264, 302, 391, 515 |
| ApeKI | GCWGC | 4 cut(s) | 320, 323, 326, 452 |
| AspA2I | CCTAGG | 1 cut(s) | 394 |
| AspLEI | GCGC | 1 cut(s) | 480 |
| AspS9I | GGNCC | 3 cut(s) | 31, 50, 391 |
| AsuC2I | CCSGG | 1 cut(s) | 170 |
| AvaII | GGWCC | 2 cut(s) | 31, 50 |
| AvrII | CCTAGG | 1 cut(s) | 394 |
| AxyI | CCTNAGG | 1 cut(s) | 651 |
| BaeGI | GKGCMC | 1 cut(s) | 205 |
| BamHI | GGATCC | 1 cut(s) | 165 |
| BanI | GGYRCC | 1 cut(s) | 486 |
| BanII | GRGCYC | 2 cut(s) | 162, 260 |
| BbvI | GCAGC | 4 cut(s) | 310, 313, 332, 439 |
| BccI | CCATC | 3 cut(s) | 41, 350, 584 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 192, 226 |
| BciT130I | CCWGG | 2 cut(s) | 249, 263 |
| BcnI | CCSGG | 1 cut(s) | 170 |
| BcoDI | GTCTC | 1 cut(s) | 124 |
| BfaI | CTAG | 5 cut(s) | 221, 300, 395, 525, 543 |
| BfrI | CTTAAG | 1 cut(s) | 557 |
| BfuAI | ACCTGC | 1 cut(s) | 647 |
| BisI | GCNGC | 4 cut(s) | 321, 324, 327, 453 |
| BlnI | CCTAGG | 1 cut(s) | 394 |
| BlsI | GCNGC | 4 cut(s) | 322, 325, 328, 454 |
| Bme1390I | CCNGG | 3 cut(s) | 170, 249, 263 |
| Bme18I | GGWCC | 2 cut(s) | 31, 50 |
| BmgT120I | GGNCC | 3 cut(s) | 31, 50, 391 |
| BmiI | GGNNCC | 6 cut(s) | 161, 167, 245, 259, 392, 488 |
| BmrFI | CCNGG | 3 cut(s) | 170, 249, 263 |
| BmrI | ACTGGG | 2 cut(s) | 396, 414 |
| BmsI | GCATC | 2 cut(s) | 439, 628 |
| BmuI | ACTGGG | 2 cut(s) | 396, 414 |
| BoxI | GACNNNNGTC | 1 cut(s) | 675 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 104, 136 |
| BpuEI | CTTGAG | 1 cut(s) | 570 |
| BpuMI | CCSGG | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 4 cut(s) | 53, 247, 261, 394 |
| BsaWI | WCCGGW | 1 cut(s) | 162 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 169, 253, 254, 559, 656 |
| Bse1I | ACTGG | 3 cut(s) | 321, 391, 409 |
| Bse21I | CCTNAGG | 1 cut(s) | 651 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| BseAI | TCCGGA | 1 cut(s) | 162 |
| BseBI | CCWGG | 2 cut(s) | 249, 263 |
| BseDI | CCNNGG | 4 cut(s) | 53, 247, 261, 394 |
| BseGI | GGATG | 2 cut(s) | 361, 643 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 169, 253, 254, 559, 656 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseMII | CTCAG | 2 cut(s) | 282, 642 |
| BseNI | ACTGG | 3 cut(s) | 321, 391, 409 |
| BseRI | GAGGAG | 3 cut(s) | 38, 299, 323 |
| BseSI | GKGCMC | 1 cut(s) | 205 |
| BseXI | GCAGC | 4 cut(s) | 310, 313, 332, 439 |
| Bsh1236I | CGCG | 1 cut(s) | 36 |
| BshFI | GGCC | 4 cut(s) | 266, 304, 393, 517 |
| BshNI | GGYRCC | 1 cut(s) | 486 |
| BsiSI | CCGG | 3 cut(s) | 163, 169, 305 |
| BslFI | GGGAC | 1 cut(s) | 422 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 169, 253, 254, 559, 656 |
| BsmAI | GTCTC | 1 cut(s) | 124 |
| BsmFI | GGGAC | 1 cut(s) | 422 |
| BsnI | GGCC | 4 cut(s) | 266, 304, 393, 517 |
| Bsp1286I | GDGCHC | 3 cut(s) | 162, 205, 260 |
| Bsp13I | TCCGGA | 1 cut(s) | 162 |
| Bsp143I | GATC | 3 cut(s) | 104, 165, 646 |
| BspACI | CCGC | 4 cut(s) | 34, 193, 278, 533 |
| BspANI | GGCC | 4 cut(s) | 266, 304, 393, 517 |
| BspCNI | CTCAG | 2 cut(s) | 281, 643 |
| BspEI | TCCGGA | 1 cut(s) | 162 |
| BspFNI | CGCG | 1 cut(s) | 36 |
| BspLI | GGNNCC | 6 cut(s) | 161, 167, 245, 259, 392, 488 |
| BspMI | ACCTGC | 1 cut(s) | 647 |
| BspPI | GGATC | 4 cut(s) | 112, 160, 173, 641 |
| BspQI | GCTCTTC | 1 cut(s) | 605 |
| BspT107I | GGYRCC | 1 cut(s) | 486 |
| BspTI | CTTAAG | 1 cut(s) | 557 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BsrI | ACTGG | 3 cut(s) | 321, 391, 409 |
| BssECI | CCNNGG | 4 cut(s) | 53, 247, 261, 394 |
| BssMI | GATC | 3 cut(s) | 104, 165, 646 |
| BssT1I | CCWWGG | 2 cut(s) | 53, 394 |
| Bst2UI | CCWGG | 2 cut(s) | 249, 263 |
| Bst6I | CTCTTC | 2 cut(s) | 506, 605 |
| BstAFI | CTTAAG | 1 cut(s) | 557 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 326, 486 |
| BstC8I | GCNNGC | 1 cut(s) | 423 |
| BstDEI | CTNAG | 3 cut(s) | 133, 268, 651 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 654 |
| BstF5I | GGATG | 2 cut(s) | 361, 643 |
| BstFNI | CGCG | 1 cut(s) | 36 |
| BstHHI | GCGC | 1 cut(s) | 480 |
| BstKTI | GATC | 3 cut(s) | 107, 168, 649 |
| BstMAI | GTCTC | 1 cut(s) | 124 |
| BstMBI | GATC | 3 cut(s) | 104, 165, 646 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 326, 486, 612 |
| BstNI | CCWGG | 2 cut(s) | 249, 263 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 675 |
| BstSCI | CCNGG | 3 cut(s) | 168, 247, 261 |
| BstSLI | GKGCMC | 1 cut(s) | 205 |
| BstUI | CGCG | 1 cut(s) | 36 |
| BstV1I | GCAGC | 4 cut(s) | 310, 313, 332, 439 |
| BstX2I | RGATCY | 2 cut(s) | 165, 646 |
| BstYI | RGATCY | 2 cut(s) | 165, 646 |
| Bsu36I | CCTNAGG | 1 cut(s) | 651 |
| BsuRI | GGCC | 4 cut(s) | 266, 304, 393, 517 |
| BtsCI | GGATG | 2 cut(s) | 361, 643 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| BveI | ACCTGC | 1 cut(s) | 647 |
| Cac8I | GCNNGC | 1 cut(s) | 423 |
| CaiI | CAGNNNCTG | 1 cut(s) | 326 |
| CfoI | GCGC | 1 cut(s) | 480 |
| Cfr13I | GGNCC | 3 cut(s) | 31, 50, 391 |
| CseI | GACGC | 2 cut(s) | 25, 176 |
| Csp6I | GTAC | 1 cut(s) | 660 |
| CviAII | CATG | 5 cut(s) | 73, 179, 412, 446, 491 |
| CviQI | GTAC | 1 cut(s) | 660 |
| DdeI | CTNAG | 3 cut(s) | 133, 268, 651 |
| DpnI | GATC | 3 cut(s) | 106, 167, 648 |
| DpnII | GATC | 3 cut(s) | 104, 165, 646 |
| Eam1104I | CTCTTC | 2 cut(s) | 506, 605 |
| EarI | CTCTTC | 2 cut(s) | 506, 605 |
| Eco130I | CCWWGG | 2 cut(s) | 53, 394 |
| Eco24I | GRGCYC | 2 cut(s) | 162, 260 |
| Eco47I | GGWCC | 2 cut(s) | 31, 50 |
| Eco57I | CTGAAG | 2 cut(s) | 46, 663 |
| Eco81I | CCTNAGG | 1 cut(s) | 651 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 654 |
| EcoO109I | RGGNCCY | 1 cut(s) | 391 |
| EcoRII | CCWGG | 2 cut(s) | 247, 261 |
| EcoT14I | CCWWGG | 2 cut(s) | 53, 394 |
| EcoT38I | GRGCYC | 2 cut(s) | 162, 260 |
| ErhI | CCWWGG | 2 cut(s) | 53, 394 |
| FaeI | CATG | 5 cut(s) | 76, 182, 415, 449, 494 |
| FaqI | GGGAC | 1 cut(s) | 422 |
| FatI | CATG | 5 cut(s) | 72, 178, 411, 445, 490 |
| FauNDI | CATATG | 1 cut(s) | 439 |
| Fnu4HI | GCNGC | 4 cut(s) | 321, 324, 327, 453 |
| FokI | GGATG | 2 cut(s) | 368, 650 |
| FriOI | GRGCYC | 2 cut(s) | 162, 260 |
| Fsp4HI | GCNGC | 4 cut(s) | 321, 324, 327, 453 |
| FspBI | CTAG | 5 cut(s) | 221, 300, 395, 525, 543 |
| FspI | TGCGCA | 1 cut(s) | 479 |
| GlaI | GCGC | 1 cut(s) | 479 |
| GluI | GCNGC | 4 cut(s) | 321, 324, 327, 453 |
| HaeIII | GGCC | 4 cut(s) | 266, 304, 393, 517 |
| HapII | CCGG | 3 cut(s) | 163, 169, 305 |
| HgaI | GACGC | 2 cut(s) | 25, 176 |
| HhaI | GCGC | 1 cut(s) | 480 |
| Hin1II | CATG | 5 cut(s) | 76, 182, 415, 449, 494 |
| Hin6I | GCGC | 1 cut(s) | 478 |
| HinP1I | GCGC | 1 cut(s) | 478 |
| HincII | GTYRAC | 2 cut(s) | 384, 402 |
| HindII | GTYRAC | 2 cut(s) | 384, 402 |
| HpaII | CCGG | 3 cut(s) | 163, 169, 305 |
| Hpy166II | GTNNAC | 2 cut(s) | 384, 402 |
| Hpy188I | TCNGA | 3 cut(s) | 88, 271, 670 |
| Hpy188III | TCNNGA | 5 cut(s) | 44, 163, 587, 627, 650 |
| Hpy8I | GTNNAC | 2 cut(s) | 384, 402 |
| HpyAV | CCTTC | 4 cut(s) | 22, 50, 134, 268 |
| HpyCH4V | TGCA | 2 cut(s) | 329, 455 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 326, 486, 612 |
| HpyF3I | CTNAG | 3 cut(s) | 133, 268, 651 |
| Hsp92II | CATG | 5 cut(s) | 76, 182, 415, 449, 494 |
| HspAI | GCGC | 1 cut(s) | 478 |
| Kpn2I | TCCGGA | 1 cut(s) | 162 |
| Kzo9I | GATC | 3 cut(s) | 104, 165, 646 |
| LguI | GCTCTTC | 1 cut(s) | 605 |
| LmnI | GCTCC | 3 cut(s) | 165, 232, 263 |
| Lsp1109I | GCAGC | 4 cut(s) | 310, 313, 332, 439 |
| LweI | GCATC | 2 cut(s) | 439, 628 |
| MaeI | CTAG | 5 cut(s) | 221, 300, 395, 525, 543 |
| MalI | GATC | 3 cut(s) | 106, 167, 648 |
| MboI | GATC | 3 cut(s) | 104, 165, 646 |
| MboII | GAAGA | 4 cut(s) | 52, 523, 622, 656 |
| MflI | RGATCY | 2 cut(s) | 165, 646 |
| MhlI | GDGCHC | 3 cut(s) | 162, 205, 260 |
| MluCI | AATT | 2 cut(s) | 8, 374 |
| MmeI | TCCRAC | 4 cut(s) | 111, 577, 579, 615 |
| MroI | TCCGGA | 1 cut(s) | 162 |
| MseI | TTAA | 1 cut(s) | 558 |
| MspA1I | CMGCKG | 3 cut(s) | 66, 193, 323 |
| MspCI | CTTAAG | 1 cut(s) | 557 |
| MspI | CCGG | 3 cut(s) | 163, 169, 305 |
| MspR9I | CCNGG | 3 cut(s) | 170, 249, 263 |
| MvaI | CCWGG | 2 cut(s) | 249, 263 |
| MvnI | CGCG | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 326, 486, 612 |
| NciI | CCSGG | 1 cut(s) | 170 |
| NdeI | CATATG | 1 cut(s) | 439 |
| NdeII | GATC | 3 cut(s) | 104, 165, 646 |
| NlaIII | CATG | 5 cut(s) | 76, 182, 415, 449, 494 |
| NlaIV | GGNNCC | 6 cut(s) | 161, 167, 245, 259, 392, 488 |
| NsbI | TGCGCA | 1 cut(s) | 479 |
| PciSI | GCTCTTC | 1 cut(s) | 605 |
| PflFI | GACNNNGTC | 1 cut(s) | 35 |
| PkrI | GCNGC | 4 cut(s) | 322, 325, 328, 454 |
| PshAI | GACNNNNGTC | 1 cut(s) | 675 |
| Psp6I | CCWGG | 2 cut(s) | 247, 261 |
| PspGI | CCWGG | 2 cut(s) | 247, 261 |
| PspN4I | GGNNCC | 6 cut(s) | 161, 167, 245, 259, 392, 488 |
| PspPI | GGNCC | 3 cut(s) | 31, 50, 391 |
| PstNI | CAGNNNCTG | 1 cut(s) | 326 |
| PsuI | RGATCY | 2 cut(s) | 165, 646 |
| PsyI | GACNNNGTC | 1 cut(s) | 35 |
| PvuII | CAGCTG | 2 cut(s) | 66, 323 |
| RsaI | GTAC | 1 cut(s) | 661 |
| RsaNI | GTAC | 1 cut(s) | 660 |
| SapI | GCTCTTC | 1 cut(s) | 605 |
| SaqAI | TTAA | 1 cut(s) | 558 |
| SatI | GCNGC | 4 cut(s) | 321, 324, 327, 453 |
| Sau3AI | GATC | 3 cut(s) | 104, 165, 646 |
| Sau96I | GGNCC | 3 cut(s) | 31, 50, 391 |
| ScrFI | CCNGG | 3 cut(s) | 170, 249, 263 |
| SduI | GDGCHC | 3 cut(s) | 162, 205, 260 |
| SetI | ASST | 9 cut(s) | 68, 237, 291, 325, 526, 530, 544, 621, 661 |
| SfaNI | GCATC | 2 cut(s) | 439, 628 |
| SinI | GGWCC | 2 cut(s) | 31, 50 |
| SmlI | CTYRAG | 2 cut(s) | 557, 585 |
| SmoI | CTYRAG | 2 cut(s) | 557, 585 |
| Sse9I | AATT | 2 cut(s) | 8, 374 |
| SsiI | CCGC | 4 cut(s) | 34, 193, 278, 533 |
| SspMI | CTAG | 5 cut(s) | 221, 300, 395, 525, 543 |
| StyD4I | CCNGG | 3 cut(s) | 168, 247, 261 |
| StyI | CCWWGG | 2 cut(s) | 53, 394 |
| TaqI | TCGA | 2 cut(s) | 568, 626 |
| TasI | AATT | 2 cut(s) | 8, 374 |
| Tru1I | TTAA | 1 cut(s) | 558 |
| Tru9I | TTAA | 1 cut(s) | 558 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TseI | GCWGC | 4 cut(s) | 320, 323, 326, 452 |
| TspGWI | ACGGA | 1 cut(s) | 256 |
| TspRI | CASTG | 1 cut(s) | 114 |
| Tth111I | GACNNNGTC | 1 cut(s) | 35 |
| Vha464I | CTTAAG | 1 cut(s) | 557 |
| VpaK11BI | GGWCC | 2 cut(s) | 31, 50 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 654 |
| XmaJI | CCTAGG | 1 cut(s) | 394 |
| XspI | CTAG | 5 cut(s) | 221, 300, 395, 525, 543 |