Rmu_sc0000076.1_g000047

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000076.1
OG0000123
Physical Location & Seq
Reverse (-)
207929 .. 209194
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000076.1_g000047.1.cds

Sequence Viewer

Length: 1014 bp
atggctccacctacattatcagaggaggccattgtgagccttcatggaggagaggatgctatccatgactcatttttttatctttgtggccggcttctatcgaagaaggtggtggtgatccggtcgttctcggtggcaatctccaatgtctggggtttgaaggagacagtgttgatccatcatgaggaagatgatgtcttcgtcttccaattcaaggagagggaggggaaagatcagatccttgttggggggccatggttctataacaattcaatgctgctcttagcctattacgatggcatctctgcccttgaggcggcgccgctgctccttgaggtttgggtggacgtgaaggggttgatcaaggggggtgcagtggaaggaactgattcaatggattcttgtggtgcaggacgtctggaggaggatttggcagtggcggatcttcgaattttcgtcagcggcctcgacgctgccatttgcggtgtcgggcccggaaggagtgcaaatgggccggactgtgcttggttctgcgtcgctgtcataggtctctatgcaggaggtcgtggggccggtgatgtcctcttggatgtcggaggggatgccagaagctgctgggccgaagggggtcgtggttggagcagcgtcgggggctgctacagaaggtgcaacaatgactggaaaaatcagcatgggactgctgggctagctgttgttgggcttctttatgatgggttggcttttgctaggtctggttctgctgggattattgctgctgggtctttgggtgttcgaaagaagcaattcaagcctagcttggcgattatacctcggaaatttcagcttggtgagttggtggaggttccgatttctgtgggactagctccaaagaagaagggtcgtcctcctagatgccaaattaagcggagtccggcaaaggggaaagaagacggtaatattattgataaggatttaaaatccatcttcaaagggaaggagctatctattgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

337

Amino Acids

35.91

Weight (kDa)

6.95

Isoelectric Point (pI)

32.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 418
AccB1I GGYRCC 1 cut(s) 319
AccB7I CCANNNNNTGG 1 cut(s) 150
AciI CCGC 6 cut(s) 317, 323, 440, 462, 483, 925
AclWI GGATC 4 cut(s) 112, 169, 232, 450
AcoI YGGCCR 1 cut(s) 88
AcsI RAATTY 2 cut(s) 450, 836
AcyI GRCGYC 2 cut(s) 320, 415
AfiI CCNNNNNNNGG 6 cut(s) 150, 184, 214, 247, 316, 938
AgsI TTSAA 6 cut(s) 160, 214, 273, 393, 808, 988
AjiI CACGTC 1 cut(s) 349
AluBI AGCT 6 cut(s) 612, 710, 816, 844, 884, 1000
AluI AGCT 6 cut(s) 612, 710, 816, 844, 884, 1000
Alw26I GTCTC 2 cut(s) 158, 554
AlwI GGATC 4 cut(s) 112, 169, 232, 450
AlwNI CAGNNNCTG 1 cut(s) 612
AoxI GGCC 8 cut(s) 27, 88, 251, 463, 491, 512, 570, 618
ApaI GGGCCC 1 cut(s) 495
ApeKI GCWGC 7 cut(s) 277, 325, 473, 612, 642, 654, 773
ApoI RAATTY 2 cut(s) 450, 836
Asp700I GAANNNNTTC 2 cut(s) 388, 803
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 6 cut(s) 251, 491, 492, 512, 570, 618
AsuC2I CCSGG 1 cut(s) 495
AsuHPI GGTGA 3 cut(s) 127, 587, 860
AsuII TTCGAA 2 cut(s) 448, 793
AsuNHI GCTAGC 1 cut(s) 706
BaeGI GKGCMC 1 cut(s) 495
BanI GGYRCC 1 cut(s) 319
BanII GRGCYC 1 cut(s) 495
BbsI GAAGAC 3 cut(s) 190, 196, 954
BbvI GCAGC 7 cut(s) 264, 312, 460, 599, 641, 654, 760
BccI CCATC 4 cut(s) 186, 290, 725, 989
BclI TGATCA 1 cut(s) 360
BcnI CCSGG 1 cut(s) 495
BcoDI GTCTC 2 cut(s) 158, 554
BfaI CTAG 5 cut(s) 707, 747, 813, 881, 909
BfmI CTRYAG 1 cut(s) 658
BfoI RGCGCY 1 cut(s) 323
BglI GCCNNNNNGGC 1 cut(s) 314
Bme1390I CCNGG 1 cut(s) 495
BmgBI CACGTC 1 cut(s) 349
BmgT120I GGNCC 6 cut(s) 251, 491, 492, 512, 570, 618
BmiI GGNNCC 6 cut(s) 6, 252, 321, 493, 571, 864
BmrFI CCNGG 1 cut(s) 495
BmsI GCATC 4 cut(s) 46, 309, 592, 902
BmtI GCTAGC 1 cut(s) 710
BpiI GAAGAC 3 cut(s) 190, 196, 954
BpmI CTGGAG 1 cut(s) 440
Bpu14I TTCGAA 2 cut(s) 448, 793
BpuEI CTTGAG 2 cut(s) 332, 353
BpuMI CCSGG 1 cut(s) 495
BsaHI GRCGYC 2 cut(s) 320, 415
BsaI GGTCTC 1 cut(s) 554
BsaJI CCNNGG 2 cut(s) 254, 830
BsaWI WCCGGW 1 cut(s) 120
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 6 cut(s) 150, 184, 214, 247, 316, 938
Bse118I RCCGGY 2 cut(s) 90, 572
Bse1I ACTGG 1 cut(s) 683
BseDI CCNNGG 2 cut(s) 254, 830
BseGI GGATG 3 cut(s) 61, 595, 607
BseLI CCNNNNNNNGG 6 cut(s) 150, 184, 214, 247, 316, 938
BseNI ACTGG 1 cut(s) 683
BseRI GAGGAG 3 cut(s) 38, 63, 437
BseSI GKGCMC 1 cut(s) 495
BseXI GCAGC 7 cut(s) 264, 312, 460, 599, 641, 654, 760
BseYI CCCAGC 4 cut(s) 615, 701, 761, 776
BsgI GTGCAG 2 cut(s) 393, 429
Bsh1285I CGRYCG 1 cut(s) 125
BshFI GGCC 8 cut(s) 29, 90, 253, 465, 493, 514, 572, 620
BshNI GGYRCC 1 cut(s) 319
BsiEI CGRYCG 1 cut(s) 125
BsiSI CCGG 6 cut(s) 91, 121, 495, 515, 573, 932
BslFI GGGAC 2 cut(s) 709, 891
BslI CCNNNNNNNGG 6 cut(s) 150, 184, 214, 247, 316, 938
BsmAI GTCTC 2 cut(s) 158, 554
BsmFI GGGAC 2 cut(s) 709, 891
BsnI GGCC 8 cut(s) 29, 90, 253, 465, 493, 514, 572, 620
Bso31I GGTCTC 1 cut(s) 554
Bsp119I TTCGAA 2 cut(s) 448, 793
Bsp120I GGGCCC 1 cut(s) 491
Bsp1286I GDGCHC 1 cut(s) 495
Bsp143I GATC 6 cut(s) 117, 174, 232, 237, 360, 442
Bsp19I CCATGG 1 cut(s) 254
BspACI CCGC 6 cut(s) 317, 323, 440, 462, 483, 925
BspANI GGCC 8 cut(s) 29, 90, 253, 465, 493, 514, 572, 620
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 6 cut(s) 6, 252, 321, 493, 571, 864
BspOI GCTAGC 1 cut(s) 710
BspPI GGATC 4 cut(s) 112, 169, 232, 450
BspT104I TTCGAA 2 cut(s) 448, 793
BspT107I GGYRCC 1 cut(s) 319
BspTNI GGTCTC 1 cut(s) 554
BsrFI RCCGGY 2 cut(s) 90, 572
BsrI ACTGG 1 cut(s) 683
BssAI RCCGGY 2 cut(s) 90, 572
BssECI CCNNGG 2 cut(s) 254, 830
BssMI GATC 6 cut(s) 117, 174, 232, 237, 360, 442
BssNI GRCGYC 2 cut(s) 320, 415
BssT1I CCWWGG 1 cut(s) 254
Bst4CI ACNGT 3 cut(s) 169, 521, 953
BstACI GRCGYC 2 cut(s) 320, 415
BstBI TTCGAA 2 cut(s) 448, 793
BstC8I GCNNGC 2 cut(s) 92, 708
BstDEI CTNAG 1 cut(s) 283
BstDSI CCRYGG 1 cut(s) 254
BstF5I GGATG 3 cut(s) 61, 595, 607
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 6 cut(s) 120, 177, 235, 240, 363, 445
BstMAI GTCTC 2 cut(s) 158, 554
BstMBI GATC 6 cut(s) 117, 174, 232, 237, 360, 442
BstMCI CGRYCG 1 cut(s) 125
BstMWI GCNNNNNNNGC 4 cut(s) 314, 651, 707, 808
BstSCI CCNGG 1 cut(s) 493
BstSFI CTRYAG 1 cut(s) 658
BstSLI GKGCMC 1 cut(s) 495
BstV1I GCAGC 7 cut(s) 264, 312, 460, 599, 641, 654, 760
BstV2I GAAGAC 3 cut(s) 190, 196, 954
BstX2I RGATCY 2 cut(s) 237, 442
BstYI RGATCY 2 cut(s) 237, 442
BsuRI GGCC 8 cut(s) 29, 90, 253, 465, 493, 514, 572, 620
BtgI CCRYGG 1 cut(s) 254
BtrI CACGTC 1 cut(s) 349
BtsCI GGATG 3 cut(s) 61, 595, 607
BtsI GCAGTG 2 cut(s) 381, 441
BtsIMutI CAGTG 3 cut(s) 174, 381, 441
Cac8I GCNNGC 2 cut(s) 92, 708
CaiI CAGNNNCTG 1 cut(s) 612
CciI TCATGA 1 cut(s) 181
CfoI GCGC 1 cut(s) 322
Cfr10I RCCGGY 2 cut(s) 90, 572
Cfr13I GGNCC 6 cut(s) 251, 491, 492, 512, 570, 618
CseI GACGC 3 cut(s) 479, 523, 634
CviAII CATG 5 cut(s) 44, 65, 182, 255, 692
DdeI CTNAG 1 cut(s) 283
DinI GGCGCC 1 cut(s) 321
DpnI GATC 6 cut(s) 119, 176, 234, 239, 362, 444
DpnII GATC 6 cut(s) 117, 174, 232, 237, 360, 442
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 88
EciI GGCGGA 1 cut(s) 455
Eco130I CCWWGG 1 cut(s) 254
Eco24I GRGCYC 1 cut(s) 495
Eco31I GGTCTC 1 cut(s) 554
EcoT14I CCWWGG 1 cut(s) 254
EcoT38I GRGCYC 1 cut(s) 495
EgeI GGCGCC 1 cut(s) 321
EheI GGCGCC 1 cut(s) 321
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 5 cut(s) 47, 68, 185, 258, 695
FalI AAGNNNNNCTT 2 cut(s) 800, 832
FaqI GGGAC 2 cut(s) 709, 891
FatI CATG 5 cut(s) 43, 64, 181, 254, 691
FbaI TGATCA 1 cut(s) 360
FokI GGATG 3 cut(s) 68, 602, 614
FriOI GRGCYC 1 cut(s) 495
FspBI CTAG 5 cut(s) 707, 747, 813, 881, 909
GlaI GCGC 1 cut(s) 321
GsaI CCCAGC 4 cut(s) 619, 705, 765, 780
GsuI CTGGAG 1 cut(s) 440
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 8 cut(s) 29, 90, 253, 465, 493, 514, 572, 620
HapII CCGG 6 cut(s) 91, 121, 495, 515, 573, 932
HgaI GACGC 3 cut(s) 479, 523, 634
HhaI GCGC 1 cut(s) 322
Hin1I GRCGYC 2 cut(s) 320, 415
Hin1II CATG 5 cut(s) 47, 68, 185, 258, 695
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HinfI GANTC 4 cut(s) 68, 389, 398, 928
HpaII CCGG 6 cut(s) 91, 121, 495, 515, 573, 932
HphI GGTGA 3 cut(s) 127, 587, 860
Hpy166II GTNNAC 1 cut(s) 346
Hpy188I TCNGA 5 cut(s) 22, 237, 596, 834, 867
Hpy188III TCNNGA 2 cut(s) 182, 419
Hpy8I GTNNAC 1 cut(s) 346
Hpy99I CGWCG 3 cut(s) 473, 539, 650
HpyCH4III ACNGT 3 cut(s) 169, 521, 953
HpyCH4IV ACGT 2 cut(s) 348, 415
HpyCH4V TGCA 5 cut(s) 374, 410, 506, 557, 669
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 651, 707, 808
HpyF3I CTNAG 1 cut(s) 283
HpySE526I ACGT 2 cut(s) 348, 415
Hsp92I GRCGYC 2 cut(s) 320, 415
Hsp92II CATG 5 cut(s) 47, 68, 185, 258, 695
HspAI GCGC 1 cut(s) 320
KasI GGCGCC 1 cut(s) 319
KroI GCCGGC 1 cut(s) 90
KroNI GCCGGC 1 cut(s) 92
Ksp22I TGATCA 1 cut(s) 360
Kzo9I GATC 6 cut(s) 117, 174, 232, 237, 360, 442
LmnI GCTCC 5 cut(s) 10, 333, 639, 889, 997
Lsp1109I GCAGC 7 cut(s) 264, 312, 460, 599, 641, 654, 760
LweI GCATC 4 cut(s) 46, 309, 592, 902
MaeI CTAG 5 cut(s) 707, 747, 813, 881, 909
MaeII ACGT 2 cut(s) 348, 415
MalI GATC 6 cut(s) 119, 176, 234, 239, 362, 444
MboI GATC 6 cut(s) 117, 174, 232, 237, 360, 442
MboII GAAGA 8 cut(s) 115, 190, 196, 200, 437, 904, 959, 976
MflI RGATCY 2 cut(s) 237, 442
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 6 cut(s) 209, 268, 450, 803, 836, 918
Mly113I GGCGCC 1 cut(s) 320
MlyI GAGTC 2 cut(s) 62, 937
MmeI TCCRAC 2 cut(s) 574, 617
MroNI GCCGGC 1 cut(s) 90
MroXI GAANNNNTTC 2 cut(s) 388, 803
MseI TTAA 3 cut(s) 921, 974, 1012
MspA1I CMGCKG 2 cut(s) 325, 462
MspI CCGG 6 cut(s) 91, 121, 495, 515, 573, 932
MspR9I CCNGG 1 cut(s) 495
MwoI GCNNNNNNNGC 4 cut(s) 314, 651, 707, 808
NaeI GCCGGC 1 cut(s) 92
NarI GGCGCC 1 cut(s) 320
NciI CCSGG 1 cut(s) 495
NcoI CCATGG 1 cut(s) 254
NdeII GATC 6 cut(s) 117, 174, 232, 237, 360, 442
NgoMIV GCCGGC 1 cut(s) 90
NheI GCTAGC 1 cut(s) 706
NlaIII CATG 5 cut(s) 47, 68, 185, 258, 695
NlaIV GGNNCC 6 cut(s) 6, 252, 321, 493, 571, 864
NspV TTCGAA 2 cut(s) 448, 793
PagI TCATGA 1 cut(s) 181
PdiI GCCGGC 1 cut(s) 92
PdmI GAANNNNTTC 2 cut(s) 388, 803
PfeI GAWTC 2 cut(s) 389, 398
PflMI CCANNNNNTGG 1 cut(s) 150
PleI GAGTC 2 cut(s) 62, 936
PluTI GGCGCC 1 cut(s) 323
PpsI GAGTC 2 cut(s) 62, 936
PspFI CCCAGC 4 cut(s) 615, 701, 761, 776
PspN4I GGNNCC 6 cut(s) 6, 252, 321, 493, 571, 864
PspOMI GGGCCC 1 cut(s) 491
PspPI GGNCC 6 cut(s) 251, 491, 492, 512, 570, 618
PstNI CAGNNNCTG 1 cut(s) 612
PsuI RGATCY 2 cut(s) 237, 442
SaqAI TTAA 3 cut(s) 921, 974, 1012
Sau3AI GATC 6 cut(s) 117, 174, 232, 237, 360, 442
Sau96I GGNCC 6 cut(s) 251, 491, 492, 512, 570, 618
SchI GAGTC 2 cut(s) 62, 937
ScrFI CCNGG 1 cut(s) 495
SduI GDGCHC 1 cut(s) 495
SfaNI GCATC 4 cut(s) 46, 309, 592, 902
SfcI CTRYAG 1 cut(s) 658
SfoI GGCGCC 1 cut(s) 321
SfuI TTCGAA 2 cut(s) 448, 793
SmlI CTYRAG 2 cut(s) 311, 332
SmoI CTYRAG 2 cut(s) 311, 332
Sse9I AATT 6 cut(s) 209, 268, 450, 803, 836, 918
SsiI CCGC 6 cut(s) 317, 323, 440, 462, 483, 925
SspDI GGCGCC 1 cut(s) 319
SspI AATATT 1 cut(s) 958
SspMI CTAG 5 cut(s) 707, 747, 813, 881, 909
StyD4I CCNGG 1 cut(s) 493
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 3 cut(s) 169, 521, 953
TaiI ACGT 2 cut(s) 351, 418
TaqI TCGA 4 cut(s) 101, 448, 468, 793
TasI AATT 6 cut(s) 209, 268, 450, 803, 836, 918
TauI GCSGC 3 cut(s) 320, 325, 465
TfiI GAWTC 2 cut(s) 389, 398
Tru1I TTAA 3 cut(s) 921, 974, 1012
Tru9I TTAA 3 cut(s) 921, 974, 1012
TscAI CASTG 3 cut(s) 174, 381, 441
TseI GCWGC 7 cut(s) 277, 325, 473, 612, 642, 654, 773
TspDTI ATGAA 1 cut(s) 32
TspRI CASTG 3 cut(s) 174, 381, 441
Van91I CCANNNNNTGG 1 cut(s) 150
XapI RAATTY 2 cut(s) 450, 836
XmnI GAANNNNTTC 2 cut(s) 388, 803
XspI CTAG 5 cut(s) 707, 747, 813, 881, 909
ZraI GACGTC 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.