Rmu_sc0000898.1_g000082

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000898.1
OG0000123
Physical Location & Seq
Reverse (-)
370019 .. 370887
869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000898.1_g000082.1.cds

Sequence Viewer

Length: 810 bp
atggggcttcgtattgctatgcgtaatgaacgagccctaaccctacttggaaaagatttggcgcagtttgtacagtttgatcaagtggcgatggtgaggaaggattcgattcagaggatctgggtgatccatgatgtacgacgtccgatttgggctcggcgcacttacaacttctcgccggaggtggcggtggttttggagtttatgtacgaaaagtgccatgggatctgcaagaggtgtgggtttttcatctatagacaggatggttgtgacaaaggacttgaagagacggcggcggctctggtggctgtgtcggaccggaatagcctggaattgggcttgaacatggcgcccagtctgcaagtttctgtgccggcggtggcggagccggagatgctccctacggggccgacgaagctgggcttgatgccggaggtggatgcaggtagggtggctgtggatagactggcgctggatactgcagcgggtttgactgggttgcacagttttgggccgggcaacatctctactgtgtgggtgggttctgctgggtcttcttctgggcttggggataaaagaggcccaatggtggatttgggtgtgagaaagaagatctacaagcctaggttggcatttataccaccggaatttcaactttgggagttggtggaggttccaatttcgatggagccagctccaaagaagaagaggggtcgtccatctggtcgccgggttaagaaagtggaaggtaaaaatgcaagtgtggatttaagctccaactccaatgggaaggagctgattattgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

269

Amino Acids

29.5

Weight (kDa)

9.49

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 145
Acc36I ACCTGC 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 349
AciI CCGC 6 cut(s) 188, 293, 296, 377, 383, 485
AclWI GGATC 3 cut(s) 121, 125, 233
AcsI RAATTY 1 cut(s) 647
AcyI GRCGYC 2 cut(s) 142, 350
AfaI GTAC 3 cut(s) 72, 138, 209
AfiI CCNNNNNNNGG 2 cut(s) 334, 589
AgsI TTSAA 3 cut(s) 284, 343, 653
AjnI CCWGG 1 cut(s) 327
AluBI AGCT 4 cut(s) 418, 695, 774, 796
AluI AGCT 4 cut(s) 418, 695, 774, 796
Alw26I GTCTC 1 cut(s) 281
AlwI GGATC 3 cut(s) 121, 125, 233
AoxI GGCC 3 cut(s) 407, 512, 580
ApeKI GCWGC 1 cut(s) 482
ApoI RAATTY 1 cut(s) 647
ArsI GACNNNNNNTTYG 2 cut(s) 132, 164
AspA2I CCTAGG 1 cut(s) 623
AspLEI GCGC 4 cut(s) 64, 162, 352, 472
AspS9I GGNCC 4 cut(s) 316, 407, 512, 581
AsuC2I CCSGG 2 cut(s) 516, 731
AsuHPI GGTGA 2 cut(s) 106, 136
AvaII GGWCC 1 cut(s) 316
AvrII CCTAGG 1 cut(s) 623
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 2 cut(s) 37, 157
BbsI GAAGAC 1 cut(s) 546
BbvI GCAGC 1 cut(s) 494
BccI CCATC 4 cut(s) 85, 257, 679, 727
BceAI ACGGC 1 cut(s) 306
BciT130I CCWGG 1 cut(s) 329
BciVI GTATCC 1 cut(s) 469
BclI TGATCA 1 cut(s) 79
BcnI CCSGG 2 cut(s) 516, 731
BcoDI GTCTC 1 cut(s) 281
BfaI CTAG 1 cut(s) 624
BfmI CTRYAG 2 cut(s) 253, 480
BfoI RGCGCY 2 cut(s) 353, 473
BfuAI ACCTGC 1 cut(s) 434
BfuI GTATCC 1 cut(s) 469
BglII AGATCT 1 cut(s) 612
BisI GCNGC 3 cut(s) 294, 297, 483
BlnI CCTAGG 1 cut(s) 623
BlsI GCNGC 3 cut(s) 295, 298, 484
Bme1390I CCNGG 3 cut(s) 329, 516, 731
Bme18I GGWCC 1 cut(s) 316
BmgT120I GGNCC 4 cut(s) 316, 407, 512, 581
BmiI GGNNCC 5 cut(s) 351, 387, 408, 675, 690
BmrFI CCNGG 3 cut(s) 329, 516, 731
BmrI ACTGGG 2 cut(s) 348, 504
BmsI GCATC 3 cut(s) 384, 417, 430
BmuI ACTGGG 2 cut(s) 348, 504
BpiI GAAGAC 1 cut(s) 546
BpuMI CCSGG 2 cut(s) 516, 731
BsaHI GRCGYC 2 cut(s) 142, 350
BsaJI CCNNGG 2 cut(s) 220, 623
BsaWI WCCGGW 2 cut(s) 318, 643
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 589
Bse118I RCCGGY 1 cut(s) 373
Bse1I ACTGG 3 cut(s) 354, 471, 499
BseBI CCWGG 1 cut(s) 329
BseDI CCNNGG 2 cut(s) 220, 623
BseGI GGATG 2 cut(s) 268, 445
BseLI CCNNNNNNNGG 2 cut(s) 334, 589
BseNI ACTGG 3 cut(s) 354, 471, 499
BseXI GCAGC 1 cut(s) 494
BseYI CCCAGC 2 cut(s) 418, 548
BshFI GGCC 3 cut(s) 409, 514, 582
BshNI GGYRCC 1 cut(s) 349
BsiSI CCGG 8 cut(s) 179, 319, 374, 389, 431, 515, 644, 730
BslI CCNNNNNNNGG 2 cut(s) 334, 589
BsmAI GTCTC 1 cut(s) 281
BsmBI CGTCTC 1 cut(s) 281
BsnI GGCC 3 cut(s) 409, 514, 582
Bsp1286I GDGCHC 2 cut(s) 37, 157
Bsp1407I TGTACA 1 cut(s) 70
Bsp143I GATC 5 cut(s) 79, 117, 126, 225, 612
Bsp19I CCATGG 1 cut(s) 220
BspACI CCGC 6 cut(s) 188, 293, 296, 377, 383, 485
BspANI GGCC 3 cut(s) 409, 514, 582
BspLI GGNNCC 5 cut(s) 351, 387, 408, 675, 690
BspMAI CTGCAG 1 cut(s) 484
BspMI ACCTGC 1 cut(s) 434
BspPI GGATC 3 cut(s) 121, 125, 233
BspT107I GGYRCC 1 cut(s) 349
BsrFI RCCGGY 1 cut(s) 373
BsrGI TGTACA 1 cut(s) 70
BsrI ACTGG 3 cut(s) 354, 471, 499
BssAI RCCGGY 1 cut(s) 373
BssECI CCNNGG 2 cut(s) 220, 623
BssMI GATC 5 cut(s) 79, 117, 126, 225, 612
BssNI GRCGYC 2 cut(s) 142, 350
BssT1I CCWWGG 2 cut(s) 220, 623
Bst2UI CCWGG 1 cut(s) 329
Bst4CI ACNGT 3 cut(s) 75, 506, 532
Bst6I CTCTTC 2 cut(s) 279, 701
BstACI GRCGYC 2 cut(s) 142, 350
BstAUI TGTACA 1 cut(s) 70
BstC8I GCNNGC 2 cut(s) 375, 693
BstDEI CTNAG 1 cut(s) 807
BstDSI CCRYGG 1 cut(s) 220
BstF5I GGATG 2 cut(s) 268, 445
BstH2I RGCGCY 2 cut(s) 353, 473
BstHHI GCGC 4 cut(s) 64, 162, 352, 472
BstKTI GATC 5 cut(s) 82, 120, 129, 228, 615
BstMAI GTCTC 1 cut(s) 281
BstMBI GATC 5 cut(s) 79, 117, 126, 225, 612
BstMWI GCNNNNNNNGC 4 cut(s) 305, 358, 394, 415
BstNI CCWGG 1 cut(s) 329
BstSCI CCNGG 3 cut(s) 327, 514, 729
BstSFI CTRYAG 2 cut(s) 253, 480
BstV1I GCAGC 1 cut(s) 494
BstV2I GAAGAC 1 cut(s) 546
BstX2I RGATCY 3 cut(s) 117, 225, 612
BstYI RGATCY 3 cut(s) 117, 225, 612
BsuI GTATCC 1 cut(s) 469
BsuRI GGCC 3 cut(s) 409, 514, 582
BtgI CCRYGG 1 cut(s) 220
BtgZI GCGATG 1 cut(s) 104
BtsCI GGATG 2 cut(s) 268, 445
BveI ACCTGC 1 cut(s) 434
Cac8I GCNNGC 2 cut(s) 375, 693
CfoI GCGC 4 cut(s) 64, 162, 352, 472
Cfr10I RCCGGY 1 cut(s) 373
Cfr13I GGNCC 4 cut(s) 316, 407, 512, 581
CpoI CGGWCCG 1 cut(s) 316
Csp6I GTAC 3 cut(s) 71, 137, 208
CspCI CAANNNNNGTGG 2 cut(s) 220, 255
CspI CGGWCCG 1 cut(s) 316
CviAII CATG 3 cut(s) 131, 221, 346
CviQI GTAC 3 cut(s) 71, 137, 208
DdeI CTNAG 1 cut(s) 807
DinI GGCGCC 1 cut(s) 351
DpnI GATC 5 cut(s) 81, 119, 128, 227, 614
DpnII GATC 5 cut(s) 79, 117, 126, 225, 612
Eam1104I CTCTTC 2 cut(s) 279, 701
EarI CTCTTC 2 cut(s) 279, 701
EciI GGCGGA 1 cut(s) 398
Eco130I CCWWGG 2 cut(s) 220, 623
Eco24I GRGCYC 2 cut(s) 37, 157
Eco47I GGWCC 1 cut(s) 316
EcoRII CCWGG 1 cut(s) 327
EcoT14I CCWWGG 2 cut(s) 220, 623
EcoT38I GRGCYC 2 cut(s) 37, 157
EgeI GGCGCC 1 cut(s) 351
EheI GGCGCC 1 cut(s) 351
ErhI CCWWGG 2 cut(s) 220, 623
Esp3I CGTCTC 1 cut(s) 281
FaeI CATG 3 cut(s) 134, 224, 349
FaiI YATR 7 cut(s) 20, 132, 206, 222, 255, 347, 638
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FatI CATG 3 cut(s) 130, 220, 345
FauI CCCGC 1 cut(s) 478
FbaI TGATCA 1 cut(s) 79
Fnu4HI GCNGC 3 cut(s) 294, 297, 483
FokI GGATG 2 cut(s) 275, 452
FriOI GRGCYC 2 cut(s) 37, 157
Fsp4HI GCNGC 3 cut(s) 294, 297, 483
FspBI CTAG 1 cut(s) 624
GlaI GCGC 4 cut(s) 63, 161, 351, 471
GluI GCNGC 3 cut(s) 294, 297, 483
GsaI CCCAGC 2 cut(s) 422, 552
HaeII RGCGCY 2 cut(s) 353, 473
HaeIII GGCC 3 cut(s) 409, 514, 582
HapII CCGG 8 cut(s) 179, 319, 374, 389, 431, 515, 644, 730
HhaI GCGC 4 cut(s) 64, 162, 352, 472
Hin1I GRCGYC 2 cut(s) 142, 350
Hin1II CATG 3 cut(s) 134, 224, 349
Hin6I GCGC 4 cut(s) 62, 160, 350, 470
HinP1I GCGC 4 cut(s) 62, 160, 350, 470
HinfI GANTC 2 cut(s) 104, 109
HpaII CCGG 8 cut(s) 179, 319, 374, 389, 431, 515, 644, 730
HphI GGTGA 2 cut(s) 106, 136
Hpy188I TCNGA 3 cut(s) 114, 147, 316
Hpy99I CGWCG 2 cut(s) 144, 415
HpyAV CCTTC 3 cut(s) 94, 740, 784
HpyCH4III ACNGT 3 cut(s) 75, 506, 532
HpyCH4IV ACGT 1 cut(s) 142
HpyCH4V TGCA 6 cut(s) 231, 361, 443, 482, 502, 758
HpyF10VI GCNNNNNNNGC 4 cut(s) 305, 358, 394, 415
HpyF3I CTNAG 1 cut(s) 807
HpySE526I ACGT 1 cut(s) 142
Hsp92I GRCGYC 2 cut(s) 142, 350
Hsp92II CATG 3 cut(s) 134, 224, 349
HspAI GCGC 4 cut(s) 62, 160, 350, 470
KasI GGCGCC 1 cut(s) 349
KroI GCCGGC 1 cut(s) 373
KroNI GCCGGC 1 cut(s) 375
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 5 cut(s) 79, 117, 126, 225, 612
LmnI GCTCC 6 cut(s) 385, 402, 688, 700, 779, 793
Lsp1109I GCAGC 1 cut(s) 494
LweI GCATC 3 cut(s) 384, 417, 430
MaeI CTAG 1 cut(s) 624
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 1 cut(s) 269
MalI GATC 5 cut(s) 81, 119, 128, 227, 614
MboI GATC 5 cut(s) 79, 117, 126, 225, 612
MboII GAAGA 6 cut(s) 296, 546, 549, 622, 715, 718
MflI RGATCY 3 cut(s) 117, 225, 612
MhlI GDGCHC 2 cut(s) 37, 157
MluCI AATT 3 cut(s) 332, 647, 678
Mly113I GGCGCC 1 cut(s) 350
MmeI TCCRAC 2 cut(s) 294, 801
MnlI CCTC 8 cut(s) 90, 108, 175, 228, 427, 572, 664, 702
MroNI GCCGGC 1 cut(s) 373
MseI TTAA 2 cut(s) 735, 770
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 8 cut(s) 179, 319, 374, 389, 431, 515, 644, 730
MspR9I CCNGG 3 cut(s) 329, 516, 731
MvaI CCWGG 1 cut(s) 329
MwoI GCNNNNNNNGC 4 cut(s) 305, 358, 394, 415
NaeI GCCGGC 1 cut(s) 375
NarI GGCGCC 1 cut(s) 350
NciI CCSGG 2 cut(s) 516, 731
NcoI CCATGG 1 cut(s) 220
NdeII GATC 5 cut(s) 79, 117, 126, 225, 612
NgoMIV GCCGGC 1 cut(s) 373
NlaIII CATG 3 cut(s) 134, 224, 349
NlaIV GGNNCC 5 cut(s) 351, 387, 408, 675, 690
NmeAIII GCCGAG 1 cut(s) 136
NmuCI GTSAC 1 cut(s) 269
PcsI WCGNNNNNNNCGW 1 cut(s) 410
PdiI GCCGGC 1 cut(s) 375
PfeI GAWTC 2 cut(s) 104, 109
PkrI GCNGC 3 cut(s) 295, 298, 484
PluTI GGCGCC 1 cut(s) 353
Psp6I CCWGG 1 cut(s) 327
PspFI CCCAGC 2 cut(s) 418, 548
PspGI CCWGG 1 cut(s) 327
PspN4I GGNNCC 5 cut(s) 351, 387, 408, 675, 690
PspPI GGNCC 4 cut(s) 316, 407, 512, 581
PstI CTGCAG 1 cut(s) 484
PsuI RGATCY 3 cut(s) 117, 225, 612
RsaI GTAC 3 cut(s) 72, 138, 209
RsaNI GTAC 3 cut(s) 71, 137, 208
Rsr2I CGGWCCG 1 cut(s) 316
RsrII CGGWCCG 1 cut(s) 316
SaqAI TTAA 2 cut(s) 735, 770
SatI GCNGC 3 cut(s) 294, 297, 483
Sau3AI GATC 5 cut(s) 79, 117, 126, 225, 612
Sau96I GGNCC 4 cut(s) 316, 407, 512, 581
ScrFI CCNGG 3 cut(s) 329, 516, 731
SduI GDGCHC 2 cut(s) 37, 157
SfaNI GCATC 3 cut(s) 384, 417, 430
SfcI CTRYAG 2 cut(s) 253, 480
SfoI GGCGCC 1 cut(s) 351
SinI GGWCC 1 cut(s) 316
Sse9I AATT 3 cut(s) 332, 647, 678
SsiI CCGC 6 cut(s) 188, 293, 296, 377, 383, 485
SspDI GGCGCC 1 cut(s) 349
SspMI CTAG 1 cut(s) 624
StyD4I CCNGG 3 cut(s) 327, 514, 729
StyI CCWWGG 2 cut(s) 220, 623
TaaI ACNGT 3 cut(s) 75, 506, 532
TaiI ACGT 1 cut(s) 145
TaqI TCGA 2 cut(s) 107, 683
TasI AATT 3 cut(s) 332, 647, 678
TatI WGTACW 1 cut(s) 70
TauI GCSGC 2 cut(s) 296, 299
TfiI GAWTC 2 cut(s) 104, 109
Tru1I TTAA 2 cut(s) 735, 770
Tru9I TTAA 2 cut(s) 735, 770
TseFI GTSAC 1 cut(s) 269
TseI GCWGC 1 cut(s) 482
Tsp45I GTSAC 1 cut(s) 269
TspDTI ATGAA 2 cut(s) 42, 238
VpaK11BI GGWCC 1 cut(s) 316
XapI RAATTY 1 cut(s) 647
XmaJI CCTAGG 1 cut(s) 623
XspI CTAG 1 cut(s) 624
ZraI GACGTC 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.