Rmu_sc0019100.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019100.1
OG0000123
Physical Location & Seq
Forward (+)
1216 .. 4065
2850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019100.1_g000002.1.cds

Sequence Viewer

Length: 996 bp
atgacagtggcgtcatctaggaggtcgttactggaaggagtggcagaggccgtaagcttgcttgggggctacgaagcaatccaggaccctttcttttacctgtgtggccactttctctctccgaagaaacccattgtgatctcgtcactcgcagtggtagtctctgggatatgggggcttaaggagcggatcttgatctgggaggagggagatggagtctttgtcttccagttcaaggatgaggaggtgaagaaccatgtccttaatggcagaccatggttttacaacagctcgatgttggtgctggcggattacgaaggtatcagttcgttggaggtggtgtctctccagcatctggaggtttgggtagcggtgaaggggctgcgaatggccatgaggaatgagcgtgctttaaacctcctcaaaaatgatttgggggtttttgttcaggtggatatgacggcggtgcagctcaaggattcggtccagagggtccaggtgatccacgatgtacgcaggagaatttgggcccgacggctatatagcttttcgtcggaggtttcggttcttttagaattccgatatgaaaagtgtcatggcatctgttcggagtgcgggttttttggccatggaggtggggagcgcctcttcctcctctacaccctagtgaccatgggttacggcgatttggccggtaaaccccaaatcaaagcaaaaattatcactattgcagttggaagttttccggcgattcctctatttccggctatccccgaccatcaaaccagattagtcaccaccgccacctcctccaccagcccttcttcccagttgaatcaaaccctccaacccagtcaccatcttcccctcctccccccttcgccgcgtcatccccatcactgtctcggtctccgtcacagctgcacttatcatcacctccgctgctgcatttttactctaccgccggcgccgaaagctcgacctcacttcggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

331

Amino Acids

37.04

Weight (kDa)

8.88

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 10
AccB1I GGYRCC 1 cut(s) 967
AccB7I CCANNNNNTGG 1 cut(s) 355
AccBSI CCGCTC 1 cut(s) 187
AccII CGCG 1 cut(s) 886
AciI CCGC 9 cut(s) 187, 308, 371, 464, 615, 801, 884, 940, 962
AclWI GGATC 2 cut(s) 197, 496
AcoI YGGCCR 4 cut(s) 106, 390, 625, 690
AcsI RAATTY 2 cut(s) 522, 575
AcyI GRCGYC 2 cut(s) 11, 968
AfaI GTAC 1 cut(s) 513
AfiI CCNNNNNNNGG 3 cut(s) 235, 355, 989
AflII CTTAAG 1 cut(s) 179
AgsI TTSAA 2 cut(s) 235, 835
AjnI CCWGG 2 cut(s) 81, 495
AleI CACNNNNGTG 1 cut(s) 665
AluBI AGCT 6 cut(s) 57, 291, 472, 546, 921, 977
AluI AGCT 6 cut(s) 57, 291, 472, 546, 921, 977
Alw26I GTCTC 4 cut(s) 166, 348, 908, 914
AlwI GGATC 2 cut(s) 197, 496
AlwNI CAGNNNCTG 1 cut(s) 355
AoxI GGCC 6 cut(s) 48, 106, 390, 528, 625, 690
ApaI GGGCCC 1 cut(s) 532
ApeKI GCWGC 5 cut(s) 382, 469, 921, 942, 945
ApoI RAATTY 2 cut(s) 522, 575
AspLEI GCGC 2 cut(s) 645, 970
AspS9I GGNCC 5 cut(s) 85, 484, 493, 528, 529
AsuHPI GGTGA 6 cut(s) 259, 385, 511, 787, 848, 926
AvaII GGWCC 3 cut(s) 85, 484, 493
BaeGI GKGCMC 1 cut(s) 532
BaeI ACNNNNGTAYC 2 cut(s) 304, 337
BalI TGGCCA 3 cut(s) 108, 392, 627
BanI GGYRCC 1 cut(s) 967
BanII GRGCYC 1 cut(s) 532
BbsI GAAGAC 1 cut(s) 217
BbvI GCAGC 5 cut(s) 369, 481, 908, 929, 932
BccI CCATC 4 cut(s) 206, 786, 867, 903
BceAI ACGGC 4 cut(s) 35, 477, 551, 697
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BciT130I CCWGG 2 cut(s) 83, 497
BcoDI GTCTC 4 cut(s) 166, 348, 908, 914
BfaI CTAG 2 cut(s) 18, 665
BfoI RGCGCY 2 cut(s) 646, 971
BfrI CTTAAG 1 cut(s) 179
BisI GCNGC 6 cut(s) 383, 470, 884, 922, 943, 946
BlsI GCNGC 6 cut(s) 384, 471, 885, 923, 944, 947
Bme1390I CCNGG 2 cut(s) 83, 497
Bme18I GGWCC 3 cut(s) 85, 484, 493
BmgT120I GGNCC 5 cut(s) 85, 484, 493, 528, 529
BmiI GGNNCC 4 cut(s) 87, 494, 530, 969
BmrFI CCNGG 2 cut(s) 83, 497
BmrI ACTGGG 2 cut(s) 823, 846
BmsI GCATC 2 cut(s) 361, 609
BmuI ACTGGG 2 cut(s) 823, 846
BpiI GAAGAC 1 cut(s) 217
BpmI CTGGAG 2 cut(s) 332, 377
BpuEI CTTGAG 1 cut(s) 458
BsaBI GATNNNNATC 1 cut(s) 194
BsaHI GRCGYC 2 cut(s) 11, 968
BsaI GGTCTC 1 cut(s) 914
BsaJI CCNNGG 3 cut(s) 275, 628, 672
BsaXI ACNNNNNCTCC 8 cut(s) 201, 207, 231, 237, 326, 356, 602, 632
Bsc4I CCNNNNNNNGG 3 cut(s) 235, 355, 989
Bse118I RCCGGY 2 cut(s) 692, 964
Bse1I ACTGG 4 cut(s) 36, 229, 829, 852
Bse8I GATNNNNATC 1 cut(s) 194
BseBI CCWGG 2 cut(s) 83, 497
BseDI CCNNGG 3 cut(s) 275, 628, 672
BseGI GGATG 2 cut(s) 244, 889
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 3 cut(s) 235, 355, 989
BseNI ACTGG 4 cut(s) 36, 229, 829, 852
BseRI GAGGAG 6 cut(s) 218, 257, 410, 644, 799, 860
BseSI GKGCMC 1 cut(s) 532
BseXI GCAGC 5 cut(s) 369, 481, 908, 929, 932
BsgI GTGCAG 2 cut(s) 488, 907
Bsh1236I CGCG 1 cut(s) 886
BshFI GGCC 6 cut(s) 50, 108, 392, 530, 627, 692
BshNI GGYRCC 1 cut(s) 967
BsiSI CCGG 4 cut(s) 693, 746, 764, 965
BslI CCNNNNNNNGG 3 cut(s) 235, 355, 989
BsmAI GTCTC 4 cut(s) 166, 348, 908, 914
BsnI GGCC 6 cut(s) 50, 108, 392, 530, 627, 692
Bso31I GGTCTC 1 cut(s) 914
Bsp120I GGGCCC 1 cut(s) 528
Bsp1286I GDGCHC 1 cut(s) 532
Bsp143I GATC 4 cut(s) 138, 189, 195, 501
Bsp19I CCATGG 3 cut(s) 275, 628, 672
BspACI CCGC 9 cut(s) 187, 308, 371, 464, 615, 801, 884, 940, 962
BspANI GGCC 6 cut(s) 50, 108, 392, 530, 627, 692
BspFNI CGCG 1 cut(s) 886
BspLI GGNNCC 4 cut(s) 87, 494, 530, 969
BspPI GGATC 2 cut(s) 197, 496
BspT107I GGYRCC 1 cut(s) 967
BspTI CTTAAG 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 914
BsrBI CCGCTC 1 cut(s) 187
BsrFI RCCGGY 2 cut(s) 692, 964
BsrI ACTGG 4 cut(s) 36, 229, 829, 852
BssAI RCCGGY 2 cut(s) 692, 964
BssECI CCNNGG 3 cut(s) 275, 628, 672
BssMI GATC 4 cut(s) 138, 189, 195, 501
BssNI GRCGYC 2 cut(s) 11, 968
BssT1I CCWWGG 3 cut(s) 275, 628, 672
Bst2UI CCWGG 2 cut(s) 83, 497
Bst4CI ACNGT 2 cut(s) 7, 902
Bst6I CTCTTC 1 cut(s) 653
BstACI GRCGYC 2 cut(s) 11, 968
BstAFI CTTAAG 1 cut(s) 179
BstC8I GCNNGC 4 cut(s) 59, 306, 408, 966
BstDSI CCRYGG 3 cut(s) 275, 628, 672
BstF5I GGATG 2 cut(s) 244, 889
BstFNI CGCG 1 cut(s) 886
BstH2I RGCGCY 2 cut(s) 646, 971
BstHHI GCGC 2 cut(s) 645, 970
BstKTI GATC 4 cut(s) 141, 192, 198, 504
BstMAI GTCTC 4 cut(s) 166, 348, 908, 914
BstMBI GATC 4 cut(s) 138, 189, 195, 501
BstMWI GCNNNNNNNGC 2 cut(s) 184, 974
BstNI CCWGG 2 cut(s) 83, 497
BstSCI CCNGG 2 cut(s) 81, 495
BstSLI GKGCMC 1 cut(s) 532
BstUI CGCG 1 cut(s) 886
BstV1I GCAGC 5 cut(s) 369, 481, 908, 929, 932
BstV2I GAAGAC 1 cut(s) 217
BstX2I RGATCY 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 635
BstYI RGATCY 1 cut(s) 189
BsuRI GGCC 6 cut(s) 50, 108, 392, 530, 627, 692
BtgI CCRYGG 3 cut(s) 275, 628, 672
BtsCI GGATG 2 cut(s) 244, 889
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 3 cut(s) 12, 159, 898
Cac8I GCNNGC 4 cut(s) 59, 306, 408, 966
CaiI CAGNNNCTG 1 cut(s) 355
CfoI GCGC 2 cut(s) 645, 970
Cfr10I RCCGGY 2 cut(s) 692, 964
Cfr13I GGNCC 5 cut(s) 85, 484, 493, 528, 529
CseI GACGC 1 cut(s) 875
Csp6I GTAC 1 cut(s) 512
CviAII CATG 6 cut(s) 257, 276, 394, 596, 629, 673
CviQI GTAC 1 cut(s) 512
DinI GGCGCC 1 cut(s) 969
DpnI GATC 4 cut(s) 140, 191, 197, 503
DpnII GATC 4 cut(s) 138, 189, 195, 501
DraI TTTAAA 1 cut(s) 414
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 4 cut(s) 106, 390, 625, 690
Eam1104I CTCTTC 1 cut(s) 653
EarI CTCTTC 1 cut(s) 653
EciI GGCGGA 1 cut(s) 323
Eco130I CCWWGG 3 cut(s) 275, 628, 672
Eco24I GRGCYC 1 cut(s) 532
Eco31I GGTCTC 1 cut(s) 914
Eco47I GGWCC 3 cut(s) 85, 484, 493
EcoO109I RGGNCCY 1 cut(s) 85
EcoRI GAATTC 1 cut(s) 575
EcoRII CCWGG 2 cut(s) 81, 495
EcoT14I CCWWGG 3 cut(s) 275, 628, 672
EcoT38I GRGCYC 1 cut(s) 532
EgeI GGCGCC 1 cut(s) 969
EheI GGCGCC 1 cut(s) 969
ErhI CCWWGG 3 cut(s) 275, 628, 672
FaeI CATG 6 cut(s) 260, 279, 397, 599, 632, 676
FatI CATG 6 cut(s) 256, 275, 393, 595, 628, 672
FauI CCCGC 1 cut(s) 608
Fnu4HI GCNGC 6 cut(s) 383, 470, 884, 922, 943, 946
FokI GGATG 2 cut(s) 251, 876
FriOI GRGCYC 1 cut(s) 532
Fsp4HI GCNGC 6 cut(s) 383, 470, 884, 922, 943, 946
FspBI CTAG 2 cut(s) 18, 665
GlaI GCGC 2 cut(s) 644, 969
GluI GCNGC 6 cut(s) 383, 470, 884, 922, 943, 946
GsuI CTGGAG 2 cut(s) 332, 377
HaeII RGCGCY 2 cut(s) 646, 971
HaeIII GGCC 6 cut(s) 50, 108, 392, 530, 627, 692
HapII CCGG 4 cut(s) 693, 746, 764, 965
HgaI GACGC 1 cut(s) 875
HhaI GCGC 2 cut(s) 645, 970
Hin1I GRCGYC 2 cut(s) 11, 968
Hin1II CATG 6 cut(s) 260, 279, 397, 599, 632, 676
Hin6I GCGC 2 cut(s) 643, 968
HinP1I GCGC 2 cut(s) 643, 968
HindIII AAGCTT 1 cut(s) 55
HinfI GANTC 4 cut(s) 216, 479, 751, 835
HpaII CCGG 4 cut(s) 693, 746, 764, 965
HphI GGTGA 6 cut(s) 259, 385, 511, 787, 848, 926
Hpy166II GTNNAC 1 cut(s) 698
Hpy188I TCNGA 4 cut(s) 123, 556, 581, 610
Hpy188III TCNNGA 3 cut(s) 193, 356, 487
Hpy8I GTNNAC 1 cut(s) 698
Hpy99I CGWCG 2 cut(s) 537, 556
HpyAV CCTTC 5 cut(s) 29, 311, 370, 831, 888
HpyCH4III ACNGT 2 cut(s) 7, 902
HpyCH4V TGCA 4 cut(s) 469, 731, 924, 948
HpyF10VI GCNNNNNNNGC 2 cut(s) 184, 974
Hsp92I GRCGYC 2 cut(s) 11, 968
Hsp92II CATG 6 cut(s) 260, 279, 397, 599, 632, 676
HspAI GCGC 2 cut(s) 643, 968
KasI GGCGCC 1 cut(s) 967
KroI GCCGGC 1 cut(s) 964
KroNI GCCGGC 1 cut(s) 966
Kzo9I GATC 4 cut(s) 138, 189, 195, 501
LmnI GCTCC 2 cut(s) 184, 640
Lsp1109I GCAGC 5 cut(s) 369, 481, 908, 929, 932
LweI GCATC 2 cut(s) 361, 609
MaeI CTAG 2 cut(s) 18, 665
MaeIII GTNAC 7 cut(s) 27, 144, 667, 677, 793, 854, 914
MalI GATC 4 cut(s) 140, 191, 197, 503
MbiI CCGCTC 1 cut(s) 187
MboI GATC 4 cut(s) 138, 189, 195, 501
MboII GAAGA 6 cut(s) 136, 217, 262, 640, 816, 854
MflI RGATCY 1 cut(s) 189
MhlI GDGCHC 1 cut(s) 532
MlsI TGGCCA 3 cut(s) 108, 392, 627
MluCI AATT 3 cut(s) 522, 575, 717
MluNI TGGCCA 3 cut(s) 108, 392, 627
Mly113I GGCGCC 1 cut(s) 968
MlyI GAGTC 1 cut(s) 225
MmeI TCCRAC 4 cut(s) 312, 534, 715, 871
Mox20I TGGCCA 3 cut(s) 108, 392, 627
MreI CGCCGGCG 1 cut(s) 964
MroNI GCCGGC 1 cut(s) 964
MscI TGGCCA 3 cut(s) 108, 392, 627
MseI TTAA 3 cut(s) 180, 264, 413
MslI CAYNNNNRTG 2 cut(s) 633, 665
Msp20I TGGCCA 3 cut(s) 108, 392, 627
MspA1I CMGCKG 2 cut(s) 921, 942
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 4 cut(s) 693, 746, 764, 965
MspR9I CCNGG 2 cut(s) 83, 497
MvaI CCWGG 2 cut(s) 83, 497
MvnI CGCG 1 cut(s) 886
MwoI GCNNNNNNNGC 2 cut(s) 184, 974
NaeI GCCGGC 1 cut(s) 966
NarI GGCGCC 1 cut(s) 968
NcoI CCATGG 3 cut(s) 275, 628, 672
NdeII GATC 4 cut(s) 138, 189, 195, 501
NgoMIV GCCGGC 1 cut(s) 964
NlaIII CATG 6 cut(s) 260, 279, 397, 599, 632, 676
NlaIV GGNNCC 4 cut(s) 87, 494, 530, 969
NmuCI GTSAC 5 cut(s) 144, 667, 793, 854, 914
OliI CACNNNNGTG 1 cut(s) 665
PdiI GCCGGC 1 cut(s) 966
PfeI GAWTC 3 cut(s) 479, 751, 835
PflMI CCANNNNNTGG 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 81
PkrI GCNGC 6 cut(s) 384, 471, 885, 923, 944, 947
PleI GAGTC 1 cut(s) 224
PluTI GGCGCC 1 cut(s) 971
PpsI GAGTC 1 cut(s) 224
PpuMI RGGWCCY 1 cut(s) 85
Psp5II RGGWCCY 1 cut(s) 85
Psp6I CCWGG 2 cut(s) 81, 495
PspGI CCWGG 2 cut(s) 81, 495
PspN4I GGNNCC 4 cut(s) 87, 494, 530, 969
PspOMI GGGCCC 1 cut(s) 528
PspPI GGNCC 5 cut(s) 85, 484, 493, 528, 529
PspPPI RGGWCCY 1 cut(s) 85
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 189
PvuII CAGCTG 1 cut(s) 921
RsaI GTAC 1 cut(s) 513
RsaNI GTAC 1 cut(s) 512
RseI CAYNNNNRTG 2 cut(s) 633, 665
SaqAI TTAA 3 cut(s) 180, 264, 413
SatI GCNGC 6 cut(s) 383, 470, 884, 922, 943, 946
Sau3AI GATC 4 cut(s) 138, 189, 195, 501
Sau96I GGNCC 5 cut(s) 85, 484, 493, 528, 529
SchI GAGTC 1 cut(s) 225
ScrFI CCNGG 2 cut(s) 83, 497
SduI GDGCHC 1 cut(s) 532
SfaNI GCATC 2 cut(s) 361, 609
SfoI GGCGCC 1 cut(s) 969
SgrAI CRCCGGYG 1 cut(s) 964
SinI GGWCC 3 cut(s) 85, 484, 493
SmiMI CAYNNNNRTG 2 cut(s) 633, 665
SmlI CTYRAG 2 cut(s) 179, 473
SmoI CTYRAG 2 cut(s) 179, 473
Sse9I AATT 3 cut(s) 522, 575, 717
SsiI CCGC 9 cut(s) 187, 308, 371, 464, 615, 801, 884, 940, 962
SspDI GGCGCC 1 cut(s) 967
SspMI CTAG 2 cut(s) 18, 665
StyD4I CCNGG 2 cut(s) 81, 495
StyI CCWWGG 3 cut(s) 275, 628, 672
TaaI ACNGT 2 cut(s) 7, 902
TaqI TCGA 2 cut(s) 293, 979
TaqII GACCGA 2 cut(s) 472, 896
TasI AATT 3 cut(s) 522, 575, 717
TauI GCSGC 1 cut(s) 886
TfiI GAWTC 3 cut(s) 479, 751, 835
Tru1I TTAA 3 cut(s) 180, 264, 413
Tru9I TTAA 3 cut(s) 180, 264, 413
TscAI CASTG 3 cut(s) 12, 159, 905
TseFI GTSAC 5 cut(s) 144, 667, 793, 854, 914
TseI GCWGC 5 cut(s) 382, 469, 921, 942, 945
Tsp45I GTSAC 5 cut(s) 144, 667, 793, 854, 914
TspDTI ATGAA 1 cut(s) 600
TspGWI ACGGA 1 cut(s) 902
TspRI CASTG 3 cut(s) 12, 159, 905
Van91I CCANNNNNTGG 1 cut(s) 355
Vha464I CTTAAG 1 cut(s) 179
VpaK11BI GGWCC 3 cut(s) 85, 484, 493
XapI RAATTY 2 cut(s) 522, 575
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XspI CTAG 2 cut(s) 18, 665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.