Rmu_sc0003023.1_g000002

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003023.1
OG0000123
Physical Location & Seq
Reverse (-)
10370 .. 11613
1244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003023.1_g000002.1.cds

Sequence Viewer

Length: 1029 bp
atgaaagagcgtgttctgatccatgaagaggaagaaggggtatttgttttccagttcaaggagcagggggcgaaggatcatgttctcaacggtggaccgtggttcttcaacaactccaatcttctcttggctaattatgacagaatccgggatctggcagaggttccattgaattccatggcggtttggatagcggtgaaagggttacgcatggctatgcgcaatgatcgttccctaaccctacttgggaatgccttgaggctctttgtaaggtatgatcaaggggctttgcaaaggaaagaccccgtgcaacgaatcctgattgtgcacgacgtacgccgccgcatatgggctcgacatacatactctttctcggtgttaatggtggtggatttggaactgaggtatgagaaatgtcatggtatcttccggggatgtggtttttttgtgcatgggacgggtggctgtgatgggttattgacggcattgatggagggaatgggtacagcgttggtaacaaggcaggtggaggccgaagtggtcgaagatgggcagaccggtcaacctgaggtgttgtcggtggccagccgggctaacgctggactggggctcaatgatgaggggctgctggagattgggtcggatgctacactagtgaggcctgagggcctaatggggactggtgggcctacatctcctattgtagatgggcctgatgctgcaagaagcataattttgggggtgcgtaaatggtgtcaaggtgaatggagcttggagaagcgactaaaacctatcttggcggtgatacctcatgaatttcatttgggtgaacttgtagaggtcctggttactcttgggaagactccgaagaagaagggttgccctaggggtcgtaagaacaagcccaaggttcatgatggacaattggaaagcaagaggaccaacctaatgccaaggttgttggatgctgaagactctgaggcaggtactagctccgatcccaaggggaaggagcaaatatttgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

342

Amino Acids

37.92

Weight (kDa)

7.7

Isoelectric Point (pI)

30.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 514
Acc16I TGCGCA 1 cut(s) 221
Acc36I ACCTGC 2 cut(s) 514, 974
AciI CCGC 5 cut(s) 182, 194, 340, 343, 800
AclWI GGATC 4 cut(s) 13, 84, 159, 992
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 2 cut(s) 172, 815
AcuI CTGAAG 1 cut(s) 990
AfaI GTAC 3 cut(s) 336, 505, 988
AfiI CCNNNNNNNGG 5 cut(s) 28, 58, 154, 246, 349
AgeI ACCGGT 1 cut(s) 557
AgsI TTSAA 3 cut(s) 58, 109, 172
AhlI ACTAGT 1 cut(s) 652
AjnI CCWGG 1 cut(s) 843
AluBI AGCT 2 cut(s) 771, 993
AluI AGCT 2 cut(s) 771, 993
Alw21I GWGCWC 1 cut(s) 330
Alw44I GTGCAC 1 cut(s) 326
AlwI GGATC 4 cut(s) 13, 84, 159, 992
AoxI GGCC 6 cut(s) 531, 582, 659, 667, 686, 710
ApaLI GTGCAC 1 cut(s) 326
ApeKI GCWGC 2 cut(s) 625, 719
ApoI RAATTY 2 cut(s) 172, 815
AsiGI ACCGGT 1 cut(s) 557
AspA2I CCTAGG 1 cut(s) 884
AspLEI GCGC 1 cut(s) 222
AspS9I GGNCC 6 cut(s) 95, 667, 686, 710, 841, 939
AsuC2I CCSGG 3 cut(s) 149, 431, 590
AsuHPI GGTGA 4 cut(s) 208, 773, 814, 839
AvaII GGWCC 3 cut(s) 95, 841, 939
AvrII CCTAGG 1 cut(s) 884
AxyI CCTNAGG 2 cut(s) 567, 663
BaeGI GKGCMC 1 cut(s) 330
BalI TGGCCA 1 cut(s) 584
BanII GRGCYC 2 cut(s) 355, 612
BbsI GAAGAC 2 cut(s) 866, 978
Bbv12I GWGCWC 1 cut(s) 330
BbvI GCAGC 2 cut(s) 612, 706
BccI CCATC 5 cut(s) 464, 484, 542, 701, 911
BceAI ACGGC 1 cut(s) 498
BciT130I CCWGG 1 cut(s) 845
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 3 cut(s) 149, 431, 590
BcuI ACTAGT 1 cut(s) 652
BfaI CTAG 3 cut(s) 653, 885, 990
BfuAI ACCTGC 2 cut(s) 514, 974
BglI GCCNNNNNGGC 1 cut(s) 590
BisI GCNGC 4 cut(s) 340, 343, 626, 720
BlnI CCTAGG 1 cut(s) 884
BlsI GCNGC 4 cut(s) 341, 344, 627, 721
Bme1390I CCNGG 4 cut(s) 149, 431, 590, 845
Bme18I GGWCC 3 cut(s) 95, 841, 939
BmgT120I GGNCC 6 cut(s) 95, 667, 686, 710, 841, 939
BmiI GGNNCC 1 cut(s) 165
BmrFI CCNGG 4 cut(s) 149, 431, 590, 845
BmrI ACTGGG 1 cut(s) 614
BmsI GCATC 3 cut(s) 634, 706, 955
BmuI ACTGGG 1 cut(s) 614
BpiI GAAGAC 2 cut(s) 866, 978
BpmI CTGGAG 1 cut(s) 650
BpuEI CTTGAG 1 cut(s) 277
BpuMI CCSGG 3 cut(s) 149, 431, 590
BsaJI CCNNGG 7 cut(s) 98, 177, 430, 884, 906, 953, 1002
BsaWI WCCGGW 1 cut(s) 557
BsaXI ACNNNNNCTCC 2 cut(s) 623, 653
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 58, 154, 246, 349
Bse118I RCCGGY 1 cut(s) 557
Bse1I ACTGG 3 cut(s) 52, 609, 685
Bse21I CCTNAGG 2 cut(s) 567, 663
Bse3DI GCAATG 1 cut(s) 229
BseBI CCWGG 1 cut(s) 845
BseDI CCNNGG 7 cut(s) 98, 177, 430, 884, 906, 953, 1002
BseGI GGATG 3 cut(s) 440, 649, 970
BseLI CCNNNNNNNGG 5 cut(s) 28, 58, 154, 246, 349
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 4 cut(s) 392, 558, 654, 969
BseNI ACTGG 3 cut(s) 52, 609, 685
BseSI GKGCMC 1 cut(s) 330
BseXI GCAGC 2 cut(s) 612, 706
BshFI GGCC 6 cut(s) 533, 584, 661, 669, 688, 712
BshTI ACCGGT 1 cut(s) 557
BsiHKAI GWGCWC 1 cut(s) 330
BsiSI CCGG 4 cut(s) 148, 430, 558, 589
BsiWI CGTACG 1 cut(s) 334
BslFI GGGAC 2 cut(s) 469, 691
BslI CCNNNNNNNGG 5 cut(s) 28, 58, 154, 246, 349
BsmFI GGGAC 2 cut(s) 469, 691
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 6 cut(s) 533, 584, 661, 669, 688, 712
Bsp1286I GDGCHC 3 cut(s) 330, 355, 612
Bsp143I GATC 6 cut(s) 18, 76, 151, 226, 277, 997
Bsp19I CCATGG 1 cut(s) 177
BspACI CCGC 5 cut(s) 182, 194, 340, 343, 800
BspANI GGCC 6 cut(s) 533, 584, 661, 669, 688, 712
BspCNI CTCAG 4 cut(s) 393, 559, 655, 970
BspHI TCATGA 2 cut(s) 811, 913
BspLI GGNNCC 1 cut(s) 165
BspMI ACCTGC 2 cut(s) 514, 974
BspPI GGATC 4 cut(s) 13, 84, 159, 992
BsrDI GCAATG 1 cut(s) 229
BsrFI RCCGGY 1 cut(s) 557
BsrI ACTGG 3 cut(s) 52, 609, 685
BssAI RCCGGY 1 cut(s) 557
BssECI CCNNGG 7 cut(s) 98, 177, 430, 884, 906, 953, 1002
BssMI GATC 6 cut(s) 18, 76, 151, 226, 277, 997
BssT1I CCWWGG 5 cut(s) 177, 884, 906, 953, 1002
Bst2UI CCWGG 1 cut(s) 845
Bst4CI ACNGT 2 cut(s) 92, 99
Bst6I CTCTTC 1 cut(s) 21
BstC8I GCNNGC 1 cut(s) 586
BstDEI CTNAG 4 cut(s) 401, 567, 663, 978
BstDSI CCRYGG 2 cut(s) 98, 177
BstF5I GGATG 3 cut(s) 440, 649, 970
BstHHI GCGC 1 cut(s) 222
BstKTI GATC 6 cut(s) 21, 79, 154, 229, 280, 1000
BstMBI GATC 6 cut(s) 18, 76, 151, 226, 277, 997
BstMWI GCNNNNNNNGC 1 cut(s) 590
BstNI CCWGG 1 cut(s) 845
BstSCI CCNGG 4 cut(s) 147, 429, 588, 843
BstSLI GKGCMC 1 cut(s) 330
BstV1I GCAGC 2 cut(s) 612, 706
BstV2I GAAGAC 2 cut(s) 866, 978
BstX2I RGATCY 1 cut(s) 151
BstYI RGATCY 1 cut(s) 151
Bsu36I CCTNAGG 2 cut(s) 567, 663
BsuRI GGCC 6 cut(s) 533, 584, 661, 669, 688, 712
BtgI CCRYGG 2 cut(s) 98, 177
BtsCI GGATG 3 cut(s) 440, 649, 970
BveI ACCTGC 2 cut(s) 514, 974
Cac8I GCNNGC 1 cut(s) 586
CciI TCATGA 2 cut(s) 811, 913
CfoI GCGC 1 cut(s) 222
Cfr10I RCCGGY 1 cut(s) 557
Cfr13I GGNCC 6 cut(s) 95, 667, 686, 710, 841, 939
Csp6I GTAC 3 cut(s) 335, 504, 987
CspAI ACCGGT 1 cut(s) 557
CspCI CAANNNNNGTGG 2 cut(s) 507, 542
CviAII CATG 8 cut(s) 23, 80, 178, 211, 419, 452, 812, 914
CviQI GTAC 3 cut(s) 335, 504, 987
DdeI CTNAG 4 cut(s) 401, 567, 663, 978
DpnI GATC 6 cut(s) 20, 78, 153, 228, 279, 999
DpnII GATC 6 cut(s) 18, 76, 151, 226, 277, 997
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco130I CCWWGG 5 cut(s) 177, 884, 906, 953, 1002
Eco147I AGGCCT 1 cut(s) 661
Eco24I GRGCYC 2 cut(s) 355, 612
Eco47I GGWCC 3 cut(s) 95, 841, 939
Eco57I CTGAAG 1 cut(s) 990
Eco81I CCTNAGG 2 cut(s) 567, 663
EcoO109I RGGNCCY 2 cut(s) 667, 841
EcoRI GAATTC 1 cut(s) 172
EcoRII CCWGG 1 cut(s) 843
EcoT14I CCWWGG 5 cut(s) 177, 884, 906, 953, 1002
EcoT38I GRGCYC 2 cut(s) 355, 612
ErhI CCWWGG 5 cut(s) 177, 884, 906, 953, 1002
FaeI CATG 8 cut(s) 26, 83, 181, 214, 422, 455, 815, 917
FaqI GGGAC 2 cut(s) 469, 691
FatI CATG 8 cut(s) 22, 79, 177, 210, 418, 451, 811, 913
FauNDI CATATG 1 cut(s) 347
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 4 cut(s) 340, 343, 626, 720
FokI GGATG 3 cut(s) 447, 656, 977
FriOI GRGCYC 2 cut(s) 355, 612
Fsp4HI GCNGC 4 cut(s) 340, 343, 626, 720
FspBI CTAG 3 cut(s) 653, 885, 990
FspI TGCGCA 1 cut(s) 221
GlaI GCGC 1 cut(s) 221
GluI GCNGC 4 cut(s) 340, 343, 626, 720
GsuI CTGGAG 1 cut(s) 650
HaeIII GGCC 6 cut(s) 533, 584, 661, 669, 688, 712
HapII CCGG 4 cut(s) 148, 430, 558, 589
HhaI GCGC 1 cut(s) 222
Hin1II CATG 8 cut(s) 26, 83, 181, 214, 422, 455, 815, 917
Hin6I GCGC 1 cut(s) 220
HinP1I GCGC 1 cut(s) 220
HincII GTYRAC 1 cut(s) 563
HindII GTYRAC 1 cut(s) 563
HinfI GANTC 4 cut(s) 144, 315, 862, 974
HpaII CCGG 4 cut(s) 148, 430, 558, 589
HphI GGTGA 4 cut(s) 208, 773, 814, 839
Hpy166II GTNNAC 4 cut(s) 95, 328, 563, 830
Hpy188I TCNGA 5 cut(s) 18, 643, 867, 979, 997
Hpy188III TCNNGA 3 cut(s) 319, 812, 914
Hpy8I GTNNAC 4 cut(s) 95, 328, 563, 830
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 4 cut(s) 29, 67, 868, 1003
HpyCH4III ACNGT 2 cut(s) 92, 99
HpyCH4IV ACGT 1 cut(s) 333
HpyCH4V TGCA 5 cut(s) 292, 310, 328, 451, 722
HpyF10VI GCNNNNNNNGC 1 cut(s) 590
HpyF3I CTNAG 4 cut(s) 401, 567, 663, 978
HpySE526I ACGT 1 cut(s) 333
Hsp92II CATG 8 cut(s) 26, 83, 181, 214, 422, 455, 815, 917
HspAI GCGC 1 cut(s) 220
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 6 cut(s) 18, 76, 151, 226, 277, 997
LmnI GCTCC 4 cut(s) 61, 768, 998, 1012
Lsp1109I GCAGC 2 cut(s) 612, 706
LweI GCATC 3 cut(s) 634, 706, 955
MaeI CTAG 3 cut(s) 653, 885, 990
MaeII ACGT 1 cut(s) 333
MaeIII GTNAC 3 cut(s) 204, 514, 847
MalI GATC 6 cut(s) 20, 78, 153, 228, 279, 999
MboI GATC 6 cut(s) 18, 76, 151, 226, 277, 997
MfeI CAATTG 1 cut(s) 923
MflI RGATCY 1 cut(s) 151
MhlI GDGCHC 3 cut(s) 330, 355, 612
MlsI TGGCCA 1 cut(s) 584
MluCI AATT 5 cut(s) 133, 172, 732, 815, 923
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 2 cut(s) 856, 968
MmeI TCCRAC 2 cut(s) 621, 942
Mox20I TGGCCA 1 cut(s) 584
MscI TGGCCA 1 cut(s) 584
MseI TTAA 1 cut(s) 380
MslI CAYNNNNRTG 2 cut(s) 215, 825
Msp20I TGGCCA 1 cut(s) 584
MspI CCGG 4 cut(s) 148, 430, 558, 589
MspR9I CCNGG 4 cut(s) 149, 431, 590, 845
MunI CAATTG 1 cut(s) 923
Mva1269I GAATGC 1 cut(s) 256
MvaI CCWGG 1 cut(s) 845
MwoI GCNNNNNNNGC 1 cut(s) 590
NciI CCSGG 3 cut(s) 149, 431, 590
NcoI CCATGG 1 cut(s) 177
NdeI CATATG 1 cut(s) 347
NdeII GATC 6 cut(s) 18, 76, 151, 226, 277, 997
NlaIII CATG 8 cut(s) 26, 83, 181, 214, 422, 455, 815, 917
NlaIV GGNNCC 1 cut(s) 165
NsbI TGCGCA 1 cut(s) 221
PagI TCATGA 2 cut(s) 811, 913
PaqCI CACCTGC 1 cut(s) 514
PceI AGGCCT 1 cut(s) 661
PctI GAATGC 1 cut(s) 256
PfeI GAWTC 2 cut(s) 144, 315
Pfl23II CGTACG 1 cut(s) 334
PfoI TCCNGGA 1 cut(s) 147
PinAI ACCGGT 1 cut(s) 557
PkrI GCNGC 4 cut(s) 341, 344, 627, 721
PleI GAGTC 2 cut(s) 856, 968
PpsI GAGTC 2 cut(s) 856, 968
PpuMI RGGWCCY 1 cut(s) 841
Psp5II RGGWCCY 1 cut(s) 841
Psp6I CCWGG 1 cut(s) 843
PspGI CCWGG 1 cut(s) 843
PspLI CGTACG 1 cut(s) 334
PspN4I GGNNCC 1 cut(s) 165
PspPI GGNCC 6 cut(s) 95, 667, 686, 710, 841, 939
PspPPI RGGWCCY 1 cut(s) 841
PsuI RGATCY 1 cut(s) 151
RsaI GTAC 3 cut(s) 336, 505, 988
RsaNI GTAC 3 cut(s) 335, 504, 987
RseI CAYNNNNRTG 2 cut(s) 215, 825
SaqAI TTAA 1 cut(s) 380
SatI GCNGC 4 cut(s) 340, 343, 626, 720
Sau3AI GATC 6 cut(s) 18, 76, 151, 226, 277, 997
Sau96I GGNCC 6 cut(s) 95, 667, 686, 710, 841, 939
SchI GAGTC 2 cut(s) 856, 968
ScrFI CCNGG 4 cut(s) 149, 431, 590, 845
SduI GDGCHC 3 cut(s) 330, 355, 612
SfaNI GCATC 3 cut(s) 634, 706, 955
SinI GGWCC 3 cut(s) 95, 841, 939
SmiMI CAYNNNNRTG 2 cut(s) 215, 825
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
SpeI ACTAGT 1 cut(s) 652
Sse9I AATT 5 cut(s) 133, 172, 732, 815, 923
SseBI AGGCCT 1 cut(s) 661
SsiI CCGC 5 cut(s) 182, 194, 340, 343, 800
SspI AATATT 1 cut(s) 1020
SspMI CTAG 3 cut(s) 653, 885, 990
StuI AGGCCT 1 cut(s) 661
StyD4I CCNGG 4 cut(s) 147, 429, 588, 843
StyI CCWWGG 5 cut(s) 177, 884, 906, 953, 1002
TaaI ACNGT 2 cut(s) 92, 99
TaiI ACGT 1 cut(s) 336
TaqI TCGA 2 cut(s) 355, 543
TasI AATT 5 cut(s) 133, 172, 732, 815, 923
TauI GCSGC 2 cut(s) 342, 345
TfiI GAWTC 2 cut(s) 144, 315
Tru1I TTAA 1 cut(s) 380
Tru9I TTAA 1 cut(s) 380
TseI GCWGC 2 cut(s) 625, 719
TspDTI ATGAA 5 cut(s) 17, 39, 809, 828, 902
VneI GTGCAC 1 cut(s) 326
VpaK11BI GGWCC 3 cut(s) 95, 841, 939
XapI RAATTY 2 cut(s) 172, 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 124
XmaJI CCTAGG 1 cut(s) 884
XspI CTAG 3 cut(s) 653, 885, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.