Rmu_sc0005385.1_g000016

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005385.1
OG0000123
Physical Location & Seq
Reverse (-)
53964 .. 55250
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005385.1_g000016.1.cds

Sequence Viewer

Length: 936 bp
atggcggaggagaacacggtggctccttctgcactttctgaggaggccattgtgagcctcgttggaggagaggatgcaatccatgattcattcttctacctctgtggtcggcttttatctaagaagacagtggtgatcccgtcattctcggcggcgatctccaacgtttgggggttgaaggagagagttctgatcctgcaagaggaggaggatatctttgtcttccaattcaaggatagtgaggtgaagactcggattctctcaagcggtccatggttctacaacaactctatgctgctactagtagactatgacgacatttcagatctcggggcggctcagctgcatctcttggaggtttgggtggcggttgatcaggaggcggtgcagtggaaggatccgattcagaggatccgtgtgtatgaaaaatgtcatgggttgtgtgcggcttgtggctttttcggtcatggtggggatatatgtgatggcagattggaggcggaggcgtacgctgcgatggctctagcggtgtcggaccgctcggtggactcaaacccaggtgggttggcggcgtcggaagcggcggtttctgggttggttgctgggtcagagatgctggtgacggtgggactaggtgagccagaggtttctggggtggcggaagtggctggaatgctggtgctaggatcgggttcgccggccgcaaggagttctgtacacaagagttttaagcctaggttggctttcatacctccggaatttcaccttggtgagttggtagaggttccgatttcgctagggacaactccaaagaaaaaaggtcgtcctgttggaagaaggaataagcatactttgaggaatgagaaagatgaaggtaacaatgatggtgcaaatatcagctccaactcgccagagaaggagctggctattgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

311

Amino Acids

33.35

Weight (kDa)

4.93

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 168
AccBSI CCGCTC 1 cut(s) 540
AccI GTMKAC 1 cut(s) 306
AccIII TCCGGA 1 cut(s) 754
AclI AACGTT 1 cut(s) 165
AclWI GGATC 7 cut(s) 130, 187, 392, 405, 406, 419, 694
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 1 cut(s) 758
AcyI GRCGYC 1 cut(s) 572
AfaI GTAC 2 cut(s) 509, 717
AfiI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 544
AgsI TTSAA 2 cut(s) 178, 232
AhlI ACTAGT 1 cut(s) 301
AjnI CCWGG 1 cut(s) 556
AjuI GAANNNNNNNTTGG 2 cut(s) 750, 782
AleI CACNNNNGTG 1 cut(s) 768
AluBI AGCT 3 cut(s) 343, 900, 922
AluI AGCT 3 cut(s) 343, 900, 922
AlwI GGATC 7 cut(s) 130, 187, 392, 405, 406, 419, 694
Ama87I CYCGRG 1 cut(s) 329
Aor13HI TCCGGA 1 cut(s) 754
AoxI GGCC 2 cut(s) 45, 699
ApeKI GCWGC 3 cut(s) 295, 343, 512
ApoI RAATTY 1 cut(s) 758
AspA2I CCTAGG 1 cut(s) 734
AspS9I GGNCC 2 cut(s) 269, 535
AsuHPI GGTGA 6 cut(s) 145, 256, 631, 647, 755, 782
AvaI CYCGRG 1 cut(s) 329
AvaII GGWCC 2 cut(s) 269, 535
AvrII CCTAGG 1 cut(s) 734
BamHI GGATCC 2 cut(s) 397, 411
BbsI GAAGAC 3 cut(s) 131, 214, 254
BbvI GCAGC 3 cut(s) 282, 330, 499
BccI CCATC 3 cut(s) 479, 511, 878
BciT130I CCWGG 1 cut(s) 558
BclI TGATCA 1 cut(s) 373
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 6 cut(s) 302, 524, 632, 683, 735, 797
BglII AGATCT 1 cut(s) 325
BisI GCNGC 9 cut(s) 153, 296, 336, 344, 447, 513, 570, 582, 702
BlnI CCTAGG 1 cut(s) 734
BlpI GCTNAGC 1 cut(s) 339
BlsI GCNGC 9 cut(s) 154, 297, 337, 345, 448, 514, 571, 583, 703
Bme1390I CCNGG 1 cut(s) 558
Bme18I GGWCC 2 cut(s) 269, 535
BmeT110I CYCGRG 1 cut(s) 329
BmgT120I GGNCC 2 cut(s) 269, 535
BmiI GGNNCC 4 cut(s) 24, 399, 413, 786
BmrFI CCNGG 1 cut(s) 558
BmsI GCATC 3 cut(s) 64, 355, 603
BpiI GAAGAC 3 cut(s) 131, 214, 254
Bpu1102I GCTNAGC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 247
BsaHI GRCGYC 1 cut(s) 572
BsaJI CCNNGG 4 cut(s) 272, 556, 734, 766
BsaWI WCCGGW 1 cut(s) 754
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 4 cut(s) 168, 202, 232, 544
Bse118I RCCGGY 1 cut(s) 697
BseAI TCCGGA 1 cut(s) 754
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 4 cut(s) 272, 556, 734, 766
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 544
BseMII CTCAG 2 cut(s) 30, 353
BseRI GAGGAG 5 cut(s) 23, 56, 81, 218, 221
BseX3I CGGCCG 1 cut(s) 699
BseXI GCAGC 3 cut(s) 282, 330, 499
BseYI CCCAGC 1 cut(s) 602
BsgI GTGCAG 2 cut(s) 15, 407
Bsh1285I CGRYCG 1 cut(s) 702
BshFI GGCC 2 cut(s) 47, 701
BsiEI CGRYCG 1 cut(s) 702
BsiHKCI CYCGRG 1 cut(s) 329
BsiSI CCGG 2 cut(s) 698, 755
BsiWI CGTACG 1 cut(s) 507
BslFI GGGAC 2 cut(s) 642, 814
BslI CCNNNNNNNGG 4 cut(s) 168, 202, 232, 544
BsmFI GGGAC 2 cut(s) 642, 814
BsmI GAATGC 1 cut(s) 678
BsnI GGCC 2 cut(s) 47, 701
BsoBI CYCGRG 1 cut(s) 329
Bsp13I TCCGGA 1 cut(s) 754
Bsp1407I TGTACA 1 cut(s) 715
Bsp143I GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
Bsp1720I GCTNAGC 1 cut(s) 339
Bsp19I CCATGG 1 cut(s) 272
BspANI GGCC 2 cut(s) 47, 701
BspCNI CTCAG 2 cut(s) 31, 352
BspEI TCCGGA 1 cut(s) 754
BspLI GGNNCC 4 cut(s) 24, 399, 413, 786
BspPI GGATC 7 cut(s) 130, 187, 392, 405, 406, 419, 694
BsrBI CCGCTC 1 cut(s) 540
BsrFI RCCGGY 1 cut(s) 697
BsrGI TGTACA 1 cut(s) 715
BssAI RCCGGY 1 cut(s) 697
BssECI CCNNGG 4 cut(s) 272, 556, 734, 766
BssMI GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
BssNI GRCGYC 1 cut(s) 572
BssT1I CCWWGG 3 cut(s) 272, 734, 766
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 3 cut(s) 19, 130, 625
BstACI GRCGYC 1 cut(s) 572
BstAUI TGTACA 1 cut(s) 715
BstC8I GCNNGC 2 cut(s) 699, 924
BstDEI CTNAG 3 cut(s) 39, 120, 339
BstDSI CCRYGG 1 cut(s) 272
BstENI CCTNNNNNAGG 1 cut(s) 200
BstF5I GGATG 1 cut(s) 79
BstKTI GATC 8 cut(s) 138, 159, 195, 328, 376, 400, 414, 689
BstMBI GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
BstMCI CGRYCG 1 cut(s) 702
BstMWI GCNNNNNNNGC 5 cut(s) 29, 512, 518, 578, 665
BstNI CCWGG 1 cut(s) 558
BstSCI CCNGG 1 cut(s) 556
BstV1I GCAGC 3 cut(s) 282, 330, 499
BstV2I GAAGAC 3 cut(s) 131, 214, 254
BstX2I RGATCY 3 cut(s) 325, 397, 411
BstYI RGATCY 3 cut(s) 325, 397, 411
BstZI CGGCCG 1 cut(s) 699
BsuRI GGCC 2 cut(s) 47, 701
BtgI CCRYGG 1 cut(s) 272
BtgZI GCGATG 1 cut(s) 530
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 395
BtsIMutI CAGTG 2 cut(s) 135, 395
Cac8I GCNNGC 2 cut(s) 699, 924
Cfr10I RCCGGY 1 cut(s) 697
Cfr13I GGNCC 2 cut(s) 269, 535
CpoI CGGWCCG 1 cut(s) 535
CseI GACGC 1 cut(s) 561
Csp6I GTAC 2 cut(s) 508, 716
CspI CGGWCCG 1 cut(s) 535
CviAII CATG 4 cut(s) 83, 273, 434, 467
CviQI GTAC 2 cut(s) 508, 716
DdeI CTNAG 3 cut(s) 39, 120, 339
DpnI GATC 8 cut(s) 137, 158, 194, 327, 375, 399, 413, 688
DpnII GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
EaeI YGGCCR 1 cut(s) 699
EagI CGGCCG 1 cut(s) 699
EciI GGCGGA 3 cut(s) 20, 515, 674
EclXI CGGCCG 1 cut(s) 699
Eco130I CCWWGG 3 cut(s) 272, 734, 766
Eco32I GATATC 1 cut(s) 214
Eco47I GGWCC 2 cut(s) 269, 535
Eco52I CGGCCG 1 cut(s) 699
Eco88I CYCGRG 1 cut(s) 329
EcoNI CCTNNNNNAGG 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 556
EcoRV GATATC 1 cut(s) 214
EcoT14I CCWWGG 3 cut(s) 272, 734, 766
ErhI CCWWGG 3 cut(s) 272, 734, 766
FaeI CATG 4 cut(s) 86, 276, 437, 470
FaqI GGGAC 2 cut(s) 642, 814
FatI CATG 4 cut(s) 82, 272, 433, 466
FbaI TGATCA 1 cut(s) 373
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 9 cut(s) 153, 296, 336, 344, 447, 513, 570, 582, 702
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 9 cut(s) 153, 296, 336, 344, 447, 513, 570, 582, 702
FspBI CTAG 6 cut(s) 302, 524, 632, 683, 735, 797
GluI GCNGC 9 cut(s) 153, 296, 336, 344, 447, 513, 570, 582, 702
GsaI CCCAGC 1 cut(s) 606
HaeIII GGCC 2 cut(s) 47, 701
HapII CCGG 2 cut(s) 698, 755
HgaI GACGC 1 cut(s) 561
Hin1I GRCGYC 1 cut(s) 572
Hin1II CATG 4 cut(s) 86, 276, 437, 470
HinfI GANTC 5 cut(s) 86, 250, 256, 403, 548
HpaII CCGG 2 cut(s) 698, 755
HphI GGTGA 6 cut(s) 145, 256, 631, 647, 755, 782
Hpy166II GTNNAC 3 cut(s) 307, 547, 718
Hpy188III TCNNGA 2 cut(s) 377, 755
Hpy8I GTNNAC 3 cut(s) 307, 547, 718
Hpy99I CGWCG 1 cut(s) 577
HpyAV CCTTC 6 cut(s) 36, 172, 388, 831, 866, 910
HpyCH4III ACNGT 3 cut(s) 19, 130, 625
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 6 cut(s) 32, 77, 199, 346, 388, 890
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 512, 518, 578, 665
HpyF3I CTNAG 3 cut(s) 39, 120, 339
HpySE526I ACGT 1 cut(s) 165
Hsp92I GRCGYC 1 cut(s) 572
Hsp92II CATG 4 cut(s) 86, 276, 437, 470
Kpn2I TCCGGA 1 cut(s) 754
KroI GCCGGC 1 cut(s) 697
KroNI GCCGGC 1 cut(s) 699
Ksp22I TGATCA 1 cut(s) 373
Kzo9I GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
LmnI GCTCC 3 cut(s) 28, 905, 919
Lsp1109I GCAGC 3 cut(s) 282, 330, 499
LweI GCATC 3 cut(s) 64, 355, 603
MaeI CTAG 6 cut(s) 302, 524, 632, 683, 735, 797
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 2 cut(s) 619, 875
MalI GATC 8 cut(s) 137, 158, 194, 327, 375, 399, 413, 688
MbiI CCGCTC 1 cut(s) 540
MboI GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
MboII GAAGA 5 cut(s) 85, 136, 214, 259, 846
MflI RGATCY 3 cut(s) 325, 397, 411
MluCI AATT 2 cut(s) 227, 758
MlyI GAGTC 2 cut(s) 244, 542
MmeI TCCRAC 6 cut(s) 43, 186, 513, 555, 811, 927
MroI TCCGGA 1 cut(s) 754
MroNI GCCGGC 1 cut(s) 697
MseI TTAA 2 cut(s) 729, 934
MslI CAYNNNNRTG 1 cut(s) 768
MspA1I CMGCKG 1 cut(s) 343
MspI CCGG 2 cut(s) 698, 755
MspR9I CCNGG 1 cut(s) 558
Mva1269I GAATGC 1 cut(s) 678
MvaI CCWGG 1 cut(s) 558
MwoI GCNNNNNNNGC 5 cut(s) 29, 512, 518, 578, 665
NaeI GCCGGC 1 cut(s) 699
NcoI CCATGG 1 cut(s) 272
NdeII GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
NgoMIV GCCGGC 1 cut(s) 697
NlaIII CATG 4 cut(s) 86, 276, 437, 470
NlaIV GGNNCC 4 cut(s) 24, 399, 413, 786
NmeAIII GCCGAG 1 cut(s) 128
NmuCI GTSAC 1 cut(s) 619
OliI CACNNNNGTG 1 cut(s) 768
PctI GAATGC 1 cut(s) 678
PdiI GCCGGC 1 cut(s) 699
PfeI GAWTC 3 cut(s) 86, 256, 403
Pfl23II CGTACG 1 cut(s) 507
PflMI CCANNNNNTGG 1 cut(s) 168
PkrI GCNGC 9 cut(s) 154, 297, 337, 345, 448, 514, 571, 583, 703
PleI GAGTC 2 cut(s) 244, 542
PpsI GAGTC 2 cut(s) 244, 542
Psp1406I AACGTT 1 cut(s) 165
Psp6I CCWGG 1 cut(s) 556
PspFI CCCAGC 1 cut(s) 602
PspGI CCWGG 1 cut(s) 556
PspLI CGTACG 1 cut(s) 507
PspN4I GGNNCC 4 cut(s) 24, 399, 413, 786
PspPI GGNCC 2 cut(s) 269, 535
PsuI RGATCY 3 cut(s) 325, 397, 411
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 2 cut(s) 509, 717
RsaNI GTAC 2 cut(s) 508, 716
RseI CAYNNNNRTG 1 cut(s) 768
Rsr2I CGGWCCG 1 cut(s) 535
RsrII CGGWCCG 1 cut(s) 535
SaqAI TTAA 2 cut(s) 729, 934
SatI GCNGC 9 cut(s) 153, 296, 336, 344, 447, 513, 570, 582, 702
Sau3AI GATC 8 cut(s) 135, 156, 192, 325, 373, 397, 411, 686
Sau96I GGNCC 2 cut(s) 269, 535
SchI GAGTC 2 cut(s) 244, 542
ScrFI CCNGG 1 cut(s) 558
SfaNI GCATC 3 cut(s) 64, 355, 603
SinI GGWCC 2 cut(s) 269, 535
SmiMI CAYNNNNRTG 1 cut(s) 768
SmlI CTYRAG 1 cut(s) 262
SmoI CTYRAG 1 cut(s) 262
SpeI ACTAGT 1 cut(s) 301
Sse9I AATT 2 cut(s) 227, 758
SspMI CTAG 6 cut(s) 302, 524, 632, 683, 735, 797
StyD4I CCNGG 1 cut(s) 556
StyI CCWWGG 3 cut(s) 272, 734, 766
TaaI ACNGT 3 cut(s) 19, 130, 625
TaiI ACGT 1 cut(s) 168
TaqII GACCGA 1 cut(s) 452
TasI AATT 2 cut(s) 227, 758
TatI WGTACW 1 cut(s) 715
TauI GCSGC 6 cut(s) 155, 338, 449, 572, 584, 704
TfiI GAWTC 3 cut(s) 86, 256, 403
Tru1I TTAA 2 cut(s) 729, 934
Tru9I TTAA 2 cut(s) 729, 934
TscAI CASTG 2 cut(s) 135, 395
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 3 cut(s) 295, 343, 512
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 4 cut(s) 78, 438, 736, 885
TspGWI ACGGA 1 cut(s) 404
TspRI CASTG 2 cut(s) 135, 395
Van91I CCANNNNNTGG 1 cut(s) 168
VpaK11BI GGWCC 2 cut(s) 269, 535
XagI CCTNNNNNAGG 1 cut(s) 200
XapI RAATTY 1 cut(s) 758
XmaJI CCTAGG 1 cut(s) 734
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 6 cut(s) 302, 524, 632, 683, 735, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.