FvH4_5g15851

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000123
Physical Location & Seq
Reverse (-)
8971435 .. 8973910
2476 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15851.t1

Sequence Viewer

Length: 1179 bp
ATGAACAAGCCGATGGTGACTCCTATCATTTCCTCGGTTCTCTCCGGGGCGTGGAATCTAAAGGAGAAGCTATTGGTTTGTGAAGAGAAATCAGGCATAAACCAGATCGCTGGAGGAGGGTCGTGGTCTTTCAACAGTGGCATGCTTATTCTGGCGGAGTATGACGGGCTTAGCCCAGTGGAAGATGTTTCTCTGAATCACTTGGAGGTGTGGGTCTCGATTGTCGGATTCCGTTTTGCCATGAGGAACAACAAGGTTCTTAGCCGTGTTGCAAATGGTTTGGGAGTCTTTTTAGCTATCAAGCTGGATTTCAAGGTTGAAAAAGCTCATGGGAATTGCAAGGATTGTGGATTCTTTGGGCATGGAGGAGGTACCTGCGATAAGGGCTTAATTTGTGGGTTGTCGGTGGTTGATGCAGTTAGCGCTGTCGACGGTGAGCCCGAGCTTTTGGCGAGCCGGGCGATGGAAACTGTTGGTTTGGTGAAGGAGCCGATTCTGCAGGTGGAAGAGGCTGTGCCAACGGGGCTAGATGATGGACTGAGTGGCAGCAAGGAGGCAGTTGCGTTGGGGAGGTTGACTAAAAGTGATGGGCCGAGAGGATTTCGTGGGCCTCTGAGGGTTGGGCTAGGTAATTCTAGGTTGAAAAGGAAGTTTGGGTTTGGAACTGAATCTGATGGGTTTGGGCCCTTTGGAGATGGGCCGGTTGGGACTAATTTGGTGCTGAAGAAGCCAAATCGTAACAAGAAAAGGACAACGAATGAAGATCCGGAGCTGTCGGATTCTTTGGCTCCTAGTTCGGAGGGTGCCAATGCAGAAACATGCCTCGAGTTCGAGGCTGAGGAGGAGATCAGCGGGTTGATCAACAGAAGGAATGAAGCAAACCCGATGACTCCCAAGGGCTACAAAATGATAATCAAGTTCAATGTGCTTCTGTGTACCTGTGTCCGGATCATACGAGCTGGCTTTCGTGAGCATCCCCTTTTTAGAAAGTGCATCCACCACAACATTGAAGGTGAACATCTCTGGAGAGACGTCAAGTCAAGCAGCATGATAATGCATTCATCAGACGGACACCCTGAGAGAACCATCAATCAGTCTTTGTATGATCCCCAACAGTATGGAACATCTTCCACTCTTGCCCTGCTTGCTCTTGCCTTTTCAGTATGCGGATACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 Exo_endo_phos_2 RNase_H RVT_1 zf-CCHC_4

Protein Analysis

393

Amino Acids

42.44

Weight (kDa)

6.76

Isoelectric Point (pI)

34.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 490
AatII GACGTC 1 cut(s) 1035
Acc36I ACCTGC 2 cut(s) 383, 490
Acc65I GGTACC 1 cut(s) 371
AccB1I GGYRCC 2 cut(s) 371, 803
AccI GTMKAC 1 cut(s) 429
AccIII TCCGGA 2 cut(s) 766, 945
AciI CCGC 3 cut(s) 155, 852, 1167
AclWI GGATC 3 cut(s) 758, 956, 1100
AcuI CTGAAG 1 cut(s) 743
AcyI GRCGYC 1 cut(s) 1032
AfaI GTAC 2 cut(s) 373, 937
AfeI AGCGCT 1 cut(s) 424
AfiI CCNNNNNNNGG 3 cut(s) 51, 463, 945
AgsI TTSAA 6 cut(s) 133, 313, 320, 643, 922, 1010
AhdI GACNNNNNGTC 1 cut(s) 1036
AluBI AGCT 7 cut(s) 70, 296, 304, 326, 445, 772, 959
AluI AGCT 7 cut(s) 70, 296, 304, 326, 445, 772, 959
Alw26I GTCTC 2 cut(s) 220, 1023
AlwI GGATC 3 cut(s) 758, 956, 1100
Ama87I CYCGRG 2 cut(s) 440, 824
Aor13HI TCCGGA 2 cut(s) 766, 945
Aor51HI AGCGCT 1 cut(s) 424
AoxI GGCC 4 cut(s) 590, 608, 683, 698
ApaI GGGCCC 1 cut(s) 687
ApeKI GCWGC 2 cut(s) 546, 1044
Asp700I GAANNNNTTC 1 cut(s) 1126
Asp718I GGTACC 1 cut(s) 371
AspLEI GCGC 1 cut(s) 425
AspS9I GGNCC 5 cut(s) 590, 608, 683, 684, 698
AsuC2I CCSGG 2 cut(s) 46, 458
AsuHPI GGTGA 4 cut(s) 28, 446, 493, 1025
AvaI CYCGRG 2 cut(s) 440, 824
BaeGI GKGCMC 1 cut(s) 687
BanI GGYRCC 2 cut(s) 371, 803
BanII GRGCYC 2 cut(s) 441, 687
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 2 cut(s) 558, 1056
BccI CCATC 7 cut(s) 7, 457, 527, 581, 668, 689, 1094
BceAI ACGGC 1 cut(s) 249
BciVI GTATCC 1 cut(s) 1163
BclI TGATCA 1 cut(s) 858
BcnI CCSGG 2 cut(s) 46, 458
BcoDI GTCTC 2 cut(s) 220, 1023
BfaI CTAG 4 cut(s) 527, 626, 636, 792
BfmI CTRYAG 1 cut(s) 497
BfoI RGCGCY 1 cut(s) 426
BfuAI ACCTGC 2 cut(s) 383, 490
BfuI GTATCC 1 cut(s) 1163
BglI GCCNNNNNGGC 1 cut(s) 523
BisI GCNGC 2 cut(s) 547, 1045
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 2 cut(s) 548, 1046
Bme1390I CCNGG 2 cut(s) 46, 458
BmeRI GACNNNNNGTC 1 cut(s) 1036
BmeT110I CYCGRG 2 cut(s) 440, 824
BmgT120I GGNCC 5 cut(s) 590, 608, 683, 684, 698
BmiI GGNNCC 5 cut(s) 373, 489, 685, 789, 805
BmrFI CCNGG 2 cut(s) 46, 458
BmrI ACTGGG 1 cut(s) 170
BmsI GCATC 3 cut(s) 403, 982, 1002
BmuI ACTGGG 1 cut(s) 170
BpmI CTGGAG 2 cut(s) 132, 1045
Bpu10I CCTNAGC 1 cut(s) 837
Bpu1102I GCTNAGC 1 cut(s) 170
BpuMI CCSGG 2 cut(s) 46, 458
BsaHI GRCGYC 1 cut(s) 1032
BsaI GGTCTC 1 cut(s) 220
BsaJI CCNNGG 3 cut(s) 33, 45, 894
BsaWI WCCGGW 2 cut(s) 766, 945
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 463, 945
Bse118I RCCGGY 1 cut(s) 700
Bse1I ACTGG 1 cut(s) 176
BseAI TCCGGA 2 cut(s) 766, 945
BseDI CCNNGG 3 cut(s) 33, 45, 894
BseGI GGATG 2 cut(s) 973, 993
BseLI CCNNNNNNNGG 3 cut(s) 51, 463, 945
BseMII CTCAG 4 cut(s) 530, 605, 828, 1068
BseNI ACTGG 1 cut(s) 176
BseRI GAGGAG 4 cut(s) 129, 381, 854, 857
BseSI GKGCMC 1 cut(s) 687
BseXI GCAGC 2 cut(s) 558, 1056
BshFI GGCC 4 cut(s) 592, 610, 685, 700
BshNI GGYRCC 2 cut(s) 371, 803
BsiHKCI CYCGRG 2 cut(s) 440, 824
BsiSI CCGG 5 cut(s) 45, 457, 701, 767, 946
BslFI GGGAC 1 cut(s) 721
BslI CCNNNNNNNGG 3 cut(s) 51, 463, 945
BsmAI GTCTC 2 cut(s) 220, 1023
BsmBI CGTCTC 1 cut(s) 1023
BsmFI GGGAC 1 cut(s) 721
BsmI GAATGC 1 cut(s) 1057
BsnI GGCC 4 cut(s) 592, 610, 685, 700
Bso31I GGTCTC 1 cut(s) 220
BsoBI CYCGRG 2 cut(s) 440, 824
Bsp120I GGGCCC 1 cut(s) 683
Bsp1286I GDGCHC 2 cut(s) 441, 687
Bsp13I TCCGGA 2 cut(s) 766, 945
Bsp143I GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
Bsp1720I GCTNAGC 1 cut(s) 170
BspACI CCGC 3 cut(s) 155, 852, 1167
BspANI GGCC 4 cut(s) 592, 610, 685, 700
BspCNI CTCAG 4 cut(s) 531, 606, 829, 1069
BspEI TCCGGA 2 cut(s) 766, 945
BspLI GGNNCC 5 cut(s) 373, 489, 685, 789, 805
BspMAI CTGCAG 1 cut(s) 501
BspMI ACCTGC 2 cut(s) 383, 490
BspPI GGATC 3 cut(s) 758, 956, 1100
BspT107I GGYRCC 2 cut(s) 371, 803
BspTNI GGTCTC 1 cut(s) 220
BsrFI RCCGGY 1 cut(s) 700
BsrI ACTGG 1 cut(s) 176
BssAI RCCGGY 1 cut(s) 700
BssECI CCNNGG 3 cut(s) 33, 45, 894
BssMI GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
BssNI GRCGYC 1 cut(s) 1032
BssT1I CCWWGG 1 cut(s) 894
Bst4CI ACNGT 4 cut(s) 137, 434, 472, 1116
Bst6I CTCTTC 2 cut(s) 78, 501
BstACI GRCGYC 1 cut(s) 1032
BstC8I GCNNGC 4 cut(s) 143, 454, 961, 1146
BstDEI CTNAG 6 cut(s) 170, 260, 539, 614, 837, 1077
BstF5I GGATG 2 cut(s) 973, 993
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 1 cut(s) 425
BstKTI GATC 6 cut(s) 108, 766, 849, 861, 951, 1108
BstMAI GTCTC 2 cut(s) 220, 1023
BstMBI GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
BstMWI GCNNNNNNNGC 7 cut(s) 384, 422, 458, 496, 523, 727, 1145
BstNSI RCATGY 2 cut(s) 145, 822
BstSCI CCNGG 2 cut(s) 44, 456
BstSFI CTRYAG 1 cut(s) 497
BstSLI GKGCMC 1 cut(s) 687
BstV1I GCAGC 2 cut(s) 558, 1056
BstX2I RGATCY 1 cut(s) 763
BstXI CCANNNNNNTGG 2 cut(s) 110, 1118
BstYI RGATCY 1 cut(s) 763
BsuI GTATCC 1 cut(s) 1163
BsuRI GGCC 4 cut(s) 592, 610, 685, 700
BtgZI GCGATG 1 cut(s) 476
BtsCI GGATG 2 cut(s) 973, 993
BtsIMutI CAGTG 2 cut(s) 142, 183
BveI ACCTGC 2 cut(s) 383, 490
Cac8I GCNNGC 4 cut(s) 143, 454, 961, 1146
CfoI GCGC 1 cut(s) 425
Cfr10I RCCGGY 1 cut(s) 700
Cfr13I GGNCC 5 cut(s) 590, 608, 683, 684, 698
Csp6I GTAC 2 cut(s) 372, 936
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviAII CATG 6 cut(s) 142, 241, 329, 362, 819, 1048
CviQI GTAC 2 cut(s) 372, 936
DdeI CTNAG 6 cut(s) 170, 260, 539, 614, 837, 1077
DpnI GATC 6 cut(s) 107, 765, 848, 860, 950, 1107
DpnII GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
DriI GACNNNNNGTC 1 cut(s) 1036
Eam1104I CTCTTC 2 cut(s) 78, 501
Eam1105I GACNNNNNGTC 1 cut(s) 1036
EarI CTCTTC 2 cut(s) 78, 501
EciI GGCGGA 1 cut(s) 170
Eco130I CCWWGG 1 cut(s) 894
Eco24I GRGCYC 2 cut(s) 441, 687
Eco31I GGTCTC 1 cut(s) 220
Eco47III AGCGCT 1 cut(s) 424
Eco57I CTGAAG 1 cut(s) 743
Eco88I CYCGRG 2 cut(s) 440, 824
EcoO109I RGGNCCY 1 cut(s) 684
EcoT14I CCWWGG 1 cut(s) 894
EcoT22I ATGCAT 1 cut(s) 1059
EcoT38I GRGCYC 2 cut(s) 441, 687
ErhI CCWWGG 1 cut(s) 894
Esp3I CGTCTC 1 cut(s) 1023
FaeI CATG 6 cut(s) 145, 244, 332, 365, 822, 1051
FaqI GGGAC 1 cut(s) 721
FatI CATG 6 cut(s) 141, 240, 328, 361, 818, 1047
FauI CCCGC 1 cut(s) 845
FbaI TGATCA 1 cut(s) 858
FblI GTMKAC 1 cut(s) 429
Fnu4HI GCNGC 2 cut(s) 547, 1045
FokI GGATG 2 cut(s) 960, 980
FriOI GRGCYC 2 cut(s) 441, 687
Fsp4HI GCNGC 2 cut(s) 547, 1045
FspBI CTAG 4 cut(s) 527, 626, 636, 792
GlaI GCGC 1 cut(s) 424
GluI GCNGC 2 cut(s) 547, 1045
GsuI CTGGAG 2 cut(s) 132, 1045
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 4 cut(s) 592, 610, 685, 700
HapII CCGG 5 cut(s) 45, 457, 701, 767, 946
HhaI GCGC 1 cut(s) 425
Hin1I GRCGYC 1 cut(s) 1032
Hin1II CATG 6 cut(s) 145, 244, 332, 365, 822, 1051
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HincII GTYRAC 2 cut(s) 430, 576
HindII GTYRAC 2 cut(s) 430, 576
HpaII CCGG 5 cut(s) 45, 457, 701, 767, 946
HphI GGTGA 4 cut(s) 28, 446, 493, 1025
Hpy166II GTNNAC 4 cut(s) 430, 576, 936, 1016
Hpy188I TCNGA 7 cut(s) 195, 227, 615, 673, 778, 799, 1066
Hpy188III TCNNGA 5 cut(s) 217, 767, 946, 968, 1024
Hpy8I GTNNAC 4 cut(s) 430, 576, 936, 1016
Hpy99I CGWCG 1 cut(s) 434
HpyAV CCTTC 3 cut(s) 478, 861, 1004
HpyCH4III ACNGT 4 cut(s) 137, 434, 472, 1116
HpyCH4IV ACGT 1 cut(s) 1032
HpyCH4V TGCA 7 cut(s) 272, 339, 416, 499, 812, 993, 1057
HpyF10VI GCNNNNNNNGC 7 cut(s) 384, 422, 458, 496, 523, 727, 1145
HpyF3I CTNAG 6 cut(s) 170, 260, 539, 614, 837, 1077
HpySE526I ACGT 1 cut(s) 1032
Hsp92I GRCGYC 1 cut(s) 1032
Hsp92II CATG 6 cut(s) 145, 244, 332, 365, 822, 1051
HspAI GCGC 1 cut(s) 423
Kpn2I TCCGGA 2 cut(s) 766, 945
KpnI GGTACC 1 cut(s) 375
Ksp22I TGATCA 1 cut(s) 858
Kzo9I GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
LmnI GCTCC 3 cut(s) 487, 769, 793
Lsp1109I GCAGC 2 cut(s) 558, 1056
LweI GCATC 3 cut(s) 403, 982, 1002
MaeI CTAG 4 cut(s) 527, 626, 636, 792
MaeII ACGT 1 cut(s) 1032
MaeIII GTNAC 2 cut(s) 16, 737
MalI GATC 6 cut(s) 107, 765, 848, 860, 950, 1107
MboI GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
MboII GAAGA 6 cut(s) 95, 194, 518, 736, 773, 1119
MflI RGATCY 1 cut(s) 763
MhlI GDGCHC 2 cut(s) 441, 687
MluCI AATT 4 cut(s) 334, 390, 631, 712
MlyI GAGTC 3 cut(s) 13, 294, 883
MmeI TCCRAC 2 cut(s) 205, 756
Mph1103I ATGCAT 1 cut(s) 1059
MroI TCCGGA 2 cut(s) 766, 945
MroXI GAANNNNTTC 1 cut(s) 1126
MseI TTAA 1 cut(s) 389
MslI CAYNNNNRTG 1 cut(s) 1052
MspA1I CMGCKG 1 cut(s) 852
MspI CCGG 5 cut(s) 45, 457, 701, 767, 946
MspR9I CCNGG 2 cut(s) 46, 458
Mva1269I GAATGC 1 cut(s) 1057
MwoI GCNNNNNNNGC 7 cut(s) 384, 422, 458, 496, 523, 727, 1145
NciI CCSGG 2 cut(s) 46, 458
NdeII GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
NlaIII CATG 6 cut(s) 145, 244, 332, 365, 822, 1051
NlaIV GGNNCC 5 cut(s) 373, 489, 685, 789, 805
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 1 cut(s) 16
NsiI ATGCAT 1 cut(s) 1059
NspI RCATGY 2 cut(s) 145, 822
PaeI GCATGC 1 cut(s) 145
PaeR7I CTCGAG 1 cut(s) 824
PaqCI CACCTGC 1 cut(s) 490
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PctI GAATGC 1 cut(s) 1057
PdmI GAANNNNTTC 1 cut(s) 1126
PfeI GAWTC 7 cut(s) 55, 196, 228, 351, 493, 668, 779
PkrI GCNGC 2 cut(s) 548, 1046
PleI GAGTC 3 cut(s) 13, 293, 883
PpsI GAGTC 3 cut(s) 13, 293, 883
PspN4I GGNNCC 5 cut(s) 373, 489, 685, 789, 805
PspOMI GGGCCC 1 cut(s) 683
PspPI GGNCC 5 cut(s) 590, 608, 683, 684, 698
PspXI VCTCGAGB 1 cut(s) 824
PstI CTGCAG 1 cut(s) 501
PsuI RGATCY 1 cut(s) 763
RsaI GTAC 2 cut(s) 373, 937
RsaNI GTAC 2 cut(s) 372, 936
RseI CAYNNNNRTG 1 cut(s) 1052
SalI GTCGAC 1 cut(s) 428
SaqAI TTAA 1 cut(s) 389
SatI GCNGC 2 cut(s) 547, 1045
Sau3AI GATC 6 cut(s) 105, 763, 846, 858, 948, 1105
Sau96I GGNCC 5 cut(s) 590, 608, 683, 684, 698
SchI GAGTC 3 cut(s) 13, 294, 883
ScrFI CCNGG 2 cut(s) 46, 458
SduI GDGCHC 2 cut(s) 441, 687
SfaNI GCATC 3 cut(s) 403, 982, 1002
SfcI CTRYAG 1 cut(s) 497
Sfr274I CTCGAG 1 cut(s) 824
SlaI CTCGAG 1 cut(s) 824
SmiMI CAYNNNNRTG 1 cut(s) 1052
SmlI CTYRAG 1 cut(s) 824
SmoI CTYRAG 1 cut(s) 824
SphI GCATGC 1 cut(s) 145
Sse9I AATT 4 cut(s) 334, 390, 631, 712
SsiI CCGC 3 cut(s) 155, 852, 1167
SspMI CTAG 4 cut(s) 527, 626, 636, 792
StyD4I CCNGG 2 cut(s) 44, 456
StyI CCWWGG 1 cut(s) 894
TaaI ACNGT 4 cut(s) 137, 434, 472, 1116
TaiI ACGT 1 cut(s) 1035
TaqI TCGA 4 cut(s) 218, 429, 825, 831
TasI AATT 4 cut(s) 334, 390, 631, 712
TfiI GAWTC 7 cut(s) 55, 196, 228, 351, 493, 668, 779
Tru1I TTAA 1 cut(s) 389
Tru9I TTAA 1 cut(s) 389
TscAI CASTG 2 cut(s) 142, 183
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 546, 1044
Tsp45I GTSAC 1 cut(s) 16
TspDTI ATGAA 4 cut(s) 17, 774, 888, 1050
TspGWI ACGGA 2 cut(s) 221, 1083
TspRI CASTG 2 cut(s) 142, 183
XceI RCATGY 2 cut(s) 145, 822
XhoI CTCGAG 1 cut(s) 824
XmiI GTMKAC 1 cut(s) 429
XmnI GAANNNNTTC 1 cut(s) 1126
XspI CTAG 4 cut(s) 527, 626, 636, 792
ZraI GACGTC 1 cut(s) 1033
Zsp2I ATGCAT 1 cut(s) 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.