Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 92, 104 |
| AccBSI | CCGCTC | 1 cut(s) | 47 |
| AciI | CCGC | 5 cut(s) | 45, 50, 77, 170, 178 |
| AclWI | GGATC | 1 cut(s) | 236 |
| AcoI | YGGCCR | 2 cut(s) | 12, 261 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 258 |
| AluBI | AGCT | 2 cut(s) | 116, 283 |
| AluI | AGCT | 2 cut(s) | 116, 283 |
| AlwI | GGATC | 1 cut(s) | 236 |
| AoxI | GGCC | 3 cut(s) | 12, 42, 261 |
| ApeKI | GCWGC | 3 cut(s) | 52, 175, 314 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 14, 46 |
| AspLEI | GCGC | 2 cut(s) | 93, 105 |
| AspS9I | GGNCC | 3 cut(s) | 144, 184, 199 |
| AsuC2I | CCSGG | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 1 cut(s) | 91 |
| AvaII | GGWCC | 3 cut(s) | 144, 184, 199 |
| BanII | GRGCYC | 1 cut(s) | 309 |
| BbvI | GCAGC | 3 cut(s) | 39, 187, 301 |
| BceAI | ACGGC | 1 cut(s) | 276 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 200, 234 |
| BcnI | CCSGG | 1 cut(s) | 188 |
| BisI | GCNGC | 4 cut(s) | 45, 53, 176, 315 |
| BlsI | GCNGC | 4 cut(s) | 46, 54, 177, 316 |
| Bme1390I | CCNGG | 1 cut(s) | 188 |
| Bme18I | GGWCC | 3 cut(s) | 144, 184, 199 |
| BmgT120I | GGNCC | 3 cut(s) | 144, 184, 199 |
| BmiI | GGNNCC | 3 cut(s) | 145, 186, 200 |
| BmrFI | CCNGG | 1 cut(s) | 188 |
| BmsI | GCATC | 2 cut(s) | 64, 102 |
| BpmI | CTGGAG | 1 cut(s) | 269 |
| BpuEI | CTTGAG | 2 cut(s) | 23, 83 |
| BpuMI | CCSGG | 1 cut(s) | 188 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bse1I | ACTGG | 1 cut(s) | 286 |
| Bse3DI | GCAATG | 1 cut(s) | 112 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseMI | GCAATG | 1 cut(s) | 112 |
| BseNI | ACTGG | 1 cut(s) | 286 |
| BseXI | GCAGC | 3 cut(s) | 39, 187, 301 |
| BsgI | GTGCAG | 1 cut(s) | 194 |
| BshFI | GGCC | 3 cut(s) | 14, 44, 263 |
| BsiSI | CCGG | 1 cut(s) | 188 |
| BslFI | GGGAC | 1 cut(s) | 157 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BsmFI | GGGAC | 1 cut(s) | 157 |
| BsnI | GGCC | 3 cut(s) | 14, 44, 263 |
| Bsp1286I | GDGCHC | 1 cut(s) | 309 |
| Bsp143I | GATC | 3 cut(s) | 34, 126, 228 |
| BspACI | CCGC | 5 cut(s) | 45, 50, 77, 170, 178 |
| BspANI | GGCC | 3 cut(s) | 14, 44, 263 |
| BspLI | GGNNCC | 3 cut(s) | 145, 186, 200 |
| BspPI | GGATC | 1 cut(s) | 236 |
| BsrBI | CCGCTC | 1 cut(s) | 47 |
| BsrDI | GCAATG | 1 cut(s) | 112 |
| BsrI | ACTGG | 1 cut(s) | 286 |
| BssMI | GATC | 3 cut(s) | 34, 126, 228 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstHHI | GCGC | 2 cut(s) | 93, 105 |
| BstKTI | GATC | 3 cut(s) | 37, 129, 231 |
| BstMBI | GATC | 3 cut(s) | 34, 126, 228 |
| BstSCI | CCNGG | 1 cut(s) | 186 |
| BstV1I | GCAGC | 3 cut(s) | 39, 187, 301 |
| BstX2I | RGATCY | 1 cut(s) | 228 |
| BstYI | RGATCY | 1 cut(s) | 228 |
| BsuRI | GGCC | 3 cut(s) | 14, 44, 263 |
| BtgZI | GCGATG | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| CfoI | GCGC | 2 cut(s) | 93, 105 |
| Cfr13I | GGNCC | 3 cut(s) | 144, 184, 199 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviAII | CATG | 2 cut(s) | 265, 302 |
| CviJI | RGCY | 6 cut(s) | 14, 44, 116, 263, 283, 307 |
| CviKI_1 | RGCY | 6 cut(s) | 14, 44, 116, 263, 283, 307 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DpnI | GATC | 3 cut(s) | 36, 128, 230 |
| DpnII | GATC | 3 cut(s) | 34, 126, 228 |
| EaeI | YGGCCR | 2 cut(s) | 12, 261 |
| Eco24I | GRGCYC | 1 cut(s) | 309 |
| Eco47I | GGWCC | 3 cut(s) | 144, 184, 199 |
| EcoO109I | RGGNCCY | 2 cut(s) | 144, 184 |
| EcoT38I | GRGCYC | 1 cut(s) | 309 |
| FaeI | CATG | 2 cut(s) | 268, 305 |
| FaiI | YATR | 5 cut(s) | 21, 70, 101, 266, 303 |
| FaqI | GGGAC | 1 cut(s) | 157 |
| FatI | CATG | 2 cut(s) | 264, 301 |
| Fnu4HI | GCNGC | 4 cut(s) | 45, 53, 176, 315 |
| FriOI | GRGCYC | 1 cut(s) | 309 |
| Fsp4HI | GCNGC | 4 cut(s) | 45, 53, 176, 315 |
| FspI | TGCGCA | 2 cut(s) | 92, 104 |
| GlaI | GCGC | 2 cut(s) | 92, 104 |
| GluI | GCNGC | 4 cut(s) | 45, 53, 176, 315 |
| GsuI | CTGGAG | 1 cut(s) | 269 |
| HaeIII | GGCC | 3 cut(s) | 14, 44, 263 |
| HapII | CCGG | 1 cut(s) | 188 |
| HhaI | GCGC | 2 cut(s) | 93, 105 |
| Hin1II | CATG | 2 cut(s) | 268, 305 |
| Hin6I | GCGC | 2 cut(s) | 91, 103 |
| HinP1I | GCGC | 2 cut(s) | 91, 103 |
| HindIII | AAGCTT | 1 cut(s) | 114 |
| HpaII | CCGG | 1 cut(s) | 188 |
| HphI | GGTGA | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 4 cut(s) | 126, 131, 195, 225 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 225 |
| HpyAV | CCTTC | 2 cut(s) | 76, 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 27 |
| HpyCH4V | TGCA | 3 cut(s) | 55, 175, 211 |
| HpySE526I | ACGT | 1 cut(s) | 27 |
| Hsp92II | CATG | 2 cut(s) | 268, 305 |
| HspAI | GCGC | 2 cut(s) | 91, 103 |
| Kzo9I | GATC | 3 cut(s) | 34, 126, 228 |
| LmnI | GCTCC | 2 cut(s) | 52, 288 |
| LpnPI | CCDG | 4 cut(s) | 149, 201, 217, 299 |
| Lsp1109I | GCAGC | 3 cut(s) | 39, 187, 301 |
| LweI | GCATC | 2 cut(s) | 64, 102 |
| MaeII | ACGT | 1 cut(s) | 27 |
| MalI | GATC | 3 cut(s) | 36, 128, 230 |
| MbiI | CCGCTC | 1 cut(s) | 47 |
| MboI | GATC | 3 cut(s) | 34, 126, 228 |
| MflI | RGATCY | 1 cut(s) | 228 |
| MhlI | GDGCHC | 1 cut(s) | 309 |
| MmeI | TCCRAC | 1 cut(s) | 203 |
| MnlI | CCTC | 3 cut(s) | 58, 189, 219 |
| MseI | TTAA | 2 cut(s) | 119, 279 |
| MslI | CAYNNNNRTG | 2 cut(s) | 98, 269 |
| MspA1I | CMGCKG | 2 cut(s) | 52, 178 |
| MspI | CCGG | 1 cut(s) | 188 |
| MspR9I | CCNGG | 1 cut(s) | 188 |
| NciI | CCSGG | 1 cut(s) | 188 |
| NdeII | GATC | 3 cut(s) | 34, 126, 228 |
| NlaIII | CATG | 2 cut(s) | 268, 305 |
| NlaIV | GGNNCC | 3 cut(s) | 145, 186, 200 |
| NsbI | TGCGCA | 2 cut(s) | 92, 104 |
| PkrI | GCNGC | 4 cut(s) | 46, 54, 177, 316 |
| PpuMI | RGGWCCY | 2 cut(s) | 144, 184 |
| Psp5II | RGGWCCY | 2 cut(s) | 144, 184 |
| PspN4I | GGNNCC | 3 cut(s) | 145, 186, 200 |
| PspPI | GGNCC | 3 cut(s) | 144, 184, 199 |
| PspPPI | RGGWCCY | 2 cut(s) | 144, 184 |
| PsuI | RGATCY | 1 cut(s) | 228 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| RseI | CAYNNNNRTG | 2 cut(s) | 98, 269 |
| SaqAI | TTAA | 2 cut(s) | 119, 279 |
| SatI | GCNGC | 4 cut(s) | 45, 53, 176, 315 |
| Sau3AI | GATC | 3 cut(s) | 34, 126, 228 |
| Sau96I | GGNCC | 3 cut(s) | 144, 184, 199 |
| ScrFI | CCNGG | 1 cut(s) | 188 |
| SduI | GDGCHC | 1 cut(s) | 309 |
| SetI | ASST | 5 cut(s) | 30, 69, 118, 149, 285 |
| SfaNI | GCATC | 2 cut(s) | 64, 102 |
| SinI | GGWCC | 3 cut(s) | 144, 184, 199 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 98, 269 |
| SmlI | CTYRAG | 2 cut(s) | 38, 62 |
| SmoI | CTYRAG | 2 cut(s) | 38, 62 |
| SsiI | CCGC | 5 cut(s) | 45, 50, 77, 170, 178 |
| StyD4I | CCNGG | 1 cut(s) | 186 |
| TaiI | ACGT | 1 cut(s) | 30 |
| TauI | GCSGC | 1 cut(s) | 47 |
| Tru1I | TTAA | 2 cut(s) | 119, 279 |
| Tru9I | TTAA | 2 cut(s) | 119, 279 |
| TseI | GCWGC | 3 cut(s) | 52, 175, 314 |
| TspGWI | ACGGA | 1 cut(s) | 191 |
| VpaK11BI | GGWCC | 3 cut(s) | 144, 184, 199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 271 |