Rorug02G0132500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000123
Physical Location & Seq
Reverse (-)
11434689 .. 11437251
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0132500.1

Sequence Viewer

Length: 1140 bp
ATGGCTGGATTTTTCTCATTAGGCGGAGGCGGAGGAGGAGGAGGAGGAGGAGGTCGGAGCAGTCACAACCCAGAAAGCCGGAATCAGAATCAACCGGAATCAAGTGAAATTCCGCCAGAGACGTTGTTTTGGTACAAGAATGAAGAGGGCATGCCGTTCAAAGGAAGCTTCGAGCTATGGCAGCACCAGCAGCAGCAACTCCAGCATCACCAGCAGCAGCAGCAGCAGCTCCACCAGCTCCAGCTCCAGCAAGATCTGTACGCCTCCGCCGCCGCTCTAGGCGTCGGTCCCAGCAGCATCAACGTCTCCGATGAGTCGTCGTCGCGGCCCTTCATGATGATGAGACCCTCCTCGTCCGGCGGCGGAGGAGGAGGAGGTGGAGGTGGATCGACGTCCGGGAGCACGGTCAGCTGTCAAGACTGCGGCAACCAAGCCAAGAAAGATTGCGTGCACATGCGGTGCAGGACTTGCTGCAAGAGCCGAGGGTTCGACTGCTCGACCCACGTGAAGAGCACGTGGGTTCCGGCGTCGAAACGCCGGGAGAGGCAGCAGCAGCACCTCACGGCGCTGCAGCAACAGCAACACACTCAACAAGAGGTTCAAGTGATCCGCGGAGGCGGAGAGAATCCGAAGAGGCTGAGAGAGAGTAGTAACAACAATCCGAATAATCCGAGCTCCAATTCTTCTCTGGGCGCCTGCACTCGCATTATCACAAACACGTCAGGGTTGGAAGTGGGGAATTTTCCAGCAGAAGTGACTTCTCCCGCAGTGTTTCGCTGCGTGAGAGTAAGCTCCATCGACGATGACGAAGATCAGTACGCATATCAGACGGCTGTGAACATCGCCGGCCACGTGTTCAAGGGAATTCTCTACAACCAAGGCCCCGATACTAACTATAATATGAGTACAGCTGGTGAGAGCTCGTCTGGTGGTGGAGGAGGCGGAGGCGGAGGCGGAGGTGGTGGAGGAGTCATTCAACCCCTCAATCTCATCAATGCGGCGCCCACGACAGCTGGCAGTGGCGGTGTAACAGTGGCAGCCGCTTCAGGTTCCGGGACGTTAATGGATCCTAATTCTCTATACCCGGTTAACCCATTCATGGCTTCGGGTACGCAATTCTTCCTACCACCAAGATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

379

Amino Acids

39.65

Weight (kDa)

6.79

Isoelectric Point (pI)

66.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF702 PF05142 135 - 296 4.1e-67 Domain of unknown function (DUF702)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 395
AccB1I GGYRCC 2 cut(s) 692, 1000
AccBSI CCGCTC 1 cut(s) 275
AccII CGCG 2 cut(s) 325, 612
AclWI GGATC 4 cut(s) 394, 601, 1061, 1074
AcoI YGGCCR 1 cut(s) 847
AcsI RAATTY 3 cut(s) 108, 739, 864
AcuI CTGAAG 1 cut(s) 1029
AcvI CACGTG 3 cut(s) 505, 516, 853
AcyI GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
AfaI GTAC 5 cut(s) 134, 260, 818, 907, 1111
AfiI CCNNNNNNNGG 2 cut(s) 161, 1099
AflIII ACRYGT 2 cut(s) 717, 852
AgsI TTSAA 4 cut(s) 160, 602, 859, 977
AjiI CACGTC 1 cut(s) 720
Alw21I GWGCWC 5 cut(s) 404, 453, 515, 677, 923
Alw26I GTCTC 3 cut(s) 113, 310, 337
Alw44I GTGCAC 1 cut(s) 449
AlwI GGATC 4 cut(s) 394, 601, 1061, 1074
AoxI GGCC 3 cut(s) 326, 847, 880
ApaLI GTGCAC 1 cut(s) 449
ApoI RAATTY 3 cut(s) 108, 739, 864
AspLEI GCGC 3 cut(s) 568, 695, 1003
AspS9I GGNCC 3 cut(s) 287, 327, 881
AsuC2I CCSGG 4 cut(s) 397, 539, 1054, 1085
AsuHPI GGTGA 2 cut(s) 200, 926
AvaII GGWCC 1 cut(s) 287
BaeGI GKGCMC 1 cut(s) 453
BamHI GGATCC 1 cut(s) 1066
BanI GGYRCC 2 cut(s) 692, 1000
BanII GRGCYC 2 cut(s) 677, 923
BbrPI CACGTG 3 cut(s) 505, 516, 853
Bbv12I GWGCWC 5 cut(s) 404, 453, 515, 677, 923
BccI CCATC 1 cut(s) 803
BceAI ACGGC 3 cut(s) 139, 579, 846
BcnI CCSGG 4 cut(s) 397, 539, 1054, 1085
BcoDI GTCTC 3 cut(s) 113, 310, 337
BfaI CTAG 1 cut(s) 278
BfmI CTRYAG 1 cut(s) 569
BfoI RGCGCY 3 cut(s) 569, 696, 1004
BglII AGATCT 2 cut(s) 253, 1133
Bme1390I CCNGG 4 cut(s) 397, 539, 1054, 1085
Bme18I GGWCC 1 cut(s) 287
BmgBI CACGTC 1 cut(s) 720
BmgT120I GGNCC 3 cut(s) 287, 327, 881
BmiI GGNNCC 7 cut(s) 289, 522, 694, 883, 1002, 1051, 1068
BmrFI CCNGG 4 cut(s) 397, 539, 1054, 1085
BmsI GCATC 2 cut(s) 214, 306
BpmI CTGGAG 3 cut(s) 185, 224, 230
BpuMI CCSGG 4 cut(s) 397, 539, 1054, 1085
BsaAI YACGTR 3 cut(s) 505, 516, 853
BsaHI GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 3 cut(s) 481, 610, 877
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 1099
Bse118I RCCGGY 1 cut(s) 845
BseDI CCNNGG 3 cut(s) 481, 610, 877
BseLI CCNNNNNNNGG 2 cut(s) 161, 1099
BseMII CTCAG 1 cut(s) 629
BseSI GKGCMC 1 cut(s) 453
BseYI CCCAGC 1 cut(s) 290
BsgI GTGCAG 2 cut(s) 481, 682
Bsh1236I CGCG 2 cut(s) 325, 612
BshFI GGCC 3 cut(s) 328, 849, 882
BshNI GGYRCC 2 cut(s) 692, 1000
BsiHKAI GWGCWC 5 cut(s) 404, 453, 515, 677, 923
BsiSI CCGG 9 cut(s) 79, 95, 357, 396, 524, 538, 846, 1053, 1085
BslFI GGGAC 2 cut(s) 273, 1069
BslI CCNNNNNNNGG 2 cut(s) 161, 1099
BsmAI GTCTC 3 cut(s) 113, 310, 337
BsmBI CGTCTC 2 cut(s) 113, 310
BsmFI GGGAC 2 cut(s) 273, 1069
BsnI GGCC 3 cut(s) 328, 849, 882
Bso31I GGTCTC 1 cut(s) 337
Bsp1286I GDGCHC 5 cut(s) 404, 453, 515, 677, 923
Bsp143I GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
BspANI GGCC 3 cut(s) 328, 849, 882
BspCNI CTCAG 1 cut(s) 630
BspFNI CGCG 2 cut(s) 325, 612
BspHI TCATGA 1 cut(s) 333
BspLI GGNNCC 7 cut(s) 289, 522, 694, 883, 1002, 1051, 1068
BspMAI CTGCAG 1 cut(s) 573
BspPI GGATC 4 cut(s) 394, 601, 1061, 1074
BspQI GCTCTTC 1 cut(s) 503
BspT107I GGYRCC 2 cut(s) 692, 1000
BspTNI GGTCTC 1 cut(s) 337
BsrBI CCGCTC 1 cut(s) 275
BsrFI RCCGGY 1 cut(s) 845
BssAI RCCGGY 1 cut(s) 845
BssECI CCNNGG 3 cut(s) 481, 610, 877
BssMI GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
BssNI GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
BssT1I CCWWGG 1 cut(s) 877
Bst4CI ACNGT 2 cut(s) 406, 1033
Bst6I CTCTTC 3 cut(s) 138, 503, 626
BstACI GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
BstAPI GCANNNNNTGC 1 cut(s) 468
BstBAI YACGTR 3 cut(s) 505, 516, 853
BstC8I GCNNGC 5 cut(s) 152, 449, 697, 847, 1015
BstDEI CTNAG 1 cut(s) 638
BstDSI CCRYGG 1 cut(s) 610
BstFNI CGCG 2 cut(s) 325, 612
BstH2I RGCGCY 3 cut(s) 569, 696, 1004
BstHHI GCGC 3 cut(s) 568, 695, 1003
BstKTI GATC 6 cut(s) 256, 389, 609, 814, 1069, 1136
BstMAI GTCTC 3 cut(s) 113, 310, 337
BstMBI GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
BstNSI RCATGY 2 cut(s) 154, 457
BstSCI CCNGG 4 cut(s) 395, 537, 1052, 1083
BstSFI CTRYAG 1 cut(s) 569
BstSLI GKGCMC 1 cut(s) 453
BstUI CGCG 2 cut(s) 325, 612
BstX2I RGATCY 3 cut(s) 253, 1066, 1133
BstYI RGATCY 3 cut(s) 253, 1066, 1133
BsuRI GGCC 3 cut(s) 328, 849, 882
BtgI CCRYGG 1 cut(s) 610
BtgZI GCGATG 1 cut(s) 826
BtrI CACGTC 1 cut(s) 720
BtsI GCAGTG 2 cut(s) 774, 1024
BtsIMutI CAGTG 3 cut(s) 774, 1024, 1038
Cac8I GCNNGC 5 cut(s) 152, 449, 697, 847, 1015
CciI TCATGA 1 cut(s) 333
CfoI GCGC 3 cut(s) 568, 695, 1003
Cfr10I RCCGGY 1 cut(s) 845
Cfr13I GGNCC 3 cut(s) 287, 327, 881
Cfr42I CCGCGG 1 cut(s) 613
CseI GACGC 2 cut(s) 271, 516
Csp6I GTAC 5 cut(s) 133, 259, 817, 906, 1110
CviAII CATG 4 cut(s) 151, 334, 454, 1099
CviQI GTAC 5 cut(s) 133, 259, 817, 906, 1110
DdeI CTNAG 1 cut(s) 638
DinI GGCGCC 2 cut(s) 694, 1002
DpnI GATC 6 cut(s) 255, 388, 608, 813, 1068, 1135
DpnII GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
EaeI YGGCCR 1 cut(s) 847
Eam1104I CTCTTC 3 cut(s) 138, 503, 626
EarI CTCTTC 3 cut(s) 138, 503, 626
EciI GGCGGA 9 cut(s) 39, 45, 102, 256, 378, 633, 957, 963, 969
Ecl136II GAGCTC 2 cut(s) 675, 921
Eco130I CCWWGG 1 cut(s) 877
Eco24I GRGCYC 2 cut(s) 677, 923
Eco31I GGTCTC 1 cut(s) 337
Eco47I GGWCC 1 cut(s) 287
Eco53kI GAGCTC 2 cut(s) 675, 921
Eco57I CTGAAG 1 cut(s) 1029
Eco72I CACGTG 3 cut(s) 505, 516, 853
EcoICRI GAGCTC 2 cut(s) 675, 921
EcoO109I RGGNCCY 1 cut(s) 881
EcoRI GAATTC 1 cut(s) 864
EcoT14I CCWWGG 1 cut(s) 877
EcoT38I GRGCYC 2 cut(s) 677, 923
EgeI GGCGCC 2 cut(s) 694, 1002
EheI GGCGCC 2 cut(s) 694, 1002
ErhI CCWWGG 1 cut(s) 877
Esp3I CGTCTC 2 cut(s) 113, 310
FaeI CATG 4 cut(s) 154, 337, 457, 1102
FaiI YATR 9 cut(s) 152, 178, 335, 455, 823, 897, 902, 1081, 1100
FaqI GGGAC 2 cut(s) 273, 1069
FatI CATG 4 cut(s) 150, 333, 453, 1098
FauI CCCGC 1 cut(s) 772
FriOI GRGCYC 2 cut(s) 677, 923
FspBI CTAG 1 cut(s) 278
GlaI GCGC 3 cut(s) 567, 694, 1002
GsaI CCCAGC 1 cut(s) 294
GsuI CTGGAG 3 cut(s) 185, 224, 230
HaeII RGCGCY 3 cut(s) 569, 696, 1004
HaeIII GGCC 3 cut(s) 328, 849, 882
HapII CCGG 9 cut(s) 79, 95, 357, 396, 524, 538, 846, 1053, 1085
HgaI GACGC 2 cut(s) 271, 516
HhaI GCGC 3 cut(s) 568, 695, 1003
Hin1I GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
Hin1II CATG 4 cut(s) 154, 337, 457, 1102
Hin6I GCGC 3 cut(s) 566, 693, 1001
HinP1I GCGC 3 cut(s) 566, 693, 1001
HincII GTYRAC 1 cut(s) 1090
HindII GTYRAC 1 cut(s) 1090
HindIII AAGCTT 1 cut(s) 166
HinfI GANTC 6 cut(s) 82, 88, 98, 314, 625, 969
HpaI GTTAAC 1 cut(s) 1090
HpaII CCGG 9 cut(s) 79, 95, 357, 396, 524, 538, 846, 1053, 1085
HphI GGTGA 2 cut(s) 200, 926
Hpy166II GTNNAC 3 cut(s) 451, 838, 1090
Hpy188I TCNGA 7 cut(s) 57, 87, 310, 630, 663, 672, 828
Hpy188III TCNNGA 3 cut(s) 334, 416, 1137
Hpy8I GTNNAC 3 cut(s) 451, 838, 1090
Hpy99I CGWCG 6 cut(s) 287, 322, 325, 394, 532, 803
HpyAV CCTTC 1 cut(s) 340
HpyCH4III ACNGT 2 cut(s) 406, 1033
HpyCH4IV ACGT 8 cut(s) 122, 303, 392, 504, 515, 719, 852, 1058
HpyCH4V TGCA 5 cut(s) 451, 462, 474, 571, 699
HpyF3I CTNAG 1 cut(s) 638
HpySE526I ACGT 8 cut(s) 122, 303, 392, 504, 515, 719, 852, 1058
Hsp92I GRCGYC 5 cut(s) 282, 392, 527, 693, 1001
Hsp92II CATG 4 cut(s) 154, 337, 457, 1102
HspAI GCGC 3 cut(s) 566, 693, 1001
KasI GGCGCC 2 cut(s) 692, 1000
KroI GCCGGC 1 cut(s) 845
KroNI GCCGGC 1 cut(s) 847
KspAI GTTAAC 1 cut(s) 1090
KspI CCGCGG 1 cut(s) 613
Kzo9I GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
LguI GCTCTTC 1 cut(s) 503
LmnI GCTCC 7 cut(s) 57, 234, 243, 249, 399, 680, 797
LweI GCATC 2 cut(s) 214, 306
MaeI CTAG 1 cut(s) 278
MaeII ACGT 8 cut(s) 122, 303, 392, 504, 515, 719, 852, 1058
MaeIII GTNAC 4 cut(s) 62, 650, 754, 1027
MalI GATC 6 cut(s) 255, 388, 608, 813, 1068, 1135
MbiI CCGCTC 1 cut(s) 275
MboI GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
MboII GAAGA 6 cut(s) 155, 520, 643, 675, 821, 1111
MflI RGATCY 3 cut(s) 253, 1066, 1133
MhlI GDGCHC 5 cut(s) 404, 453, 515, 677, 923
MluCI AATT 6 cut(s) 108, 679, 739, 864, 1072, 1115
Mly113I GGCGCC 2 cut(s) 693, 1001
MlyI GAGTC 2 cut(s) 323, 978
MmeI TCCRAC 2 cut(s) 35, 708
MroNI GCCGGC 1 cut(s) 845
MseI TTAA 2 cut(s) 1061, 1089
MslI CAYNNNNRTG 1 cut(s) 338
MspA1I CMGCKG 4 cut(s) 411, 612, 911, 1013
MspI CCGG 9 cut(s) 79, 95, 357, 396, 524, 538, 846, 1053, 1085
MspR9I CCNGG 4 cut(s) 397, 539, 1054, 1085
MvnI CGCG 2 cut(s) 325, 612
NaeI GCCGGC 1 cut(s) 847
NarI GGCGCC 2 cut(s) 693, 1001
NciI CCSGG 4 cut(s) 397, 539, 1054, 1085
NdeII GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
NgoMIV GCCGGC 1 cut(s) 845
NlaIII CATG 4 cut(s) 154, 337, 457, 1102
NlaIV GGNNCC 7 cut(s) 289, 522, 694, 883, 1002, 1051, 1068
NmeAIII GCCGAG 1 cut(s) 506
NmuCI GTSAC 2 cut(s) 62, 754
NspI RCATGY 2 cut(s) 154, 457
PaeI GCATGC 1 cut(s) 154
PagI TCATGA 1 cut(s) 333
PciSI GCTCTTC 1 cut(s) 503
PcsI WCGNNNNNNNCGW 2 cut(s) 804, 849
PdiI GCCGGC 1 cut(s) 847
PfeI GAWTC 4 cut(s) 82, 88, 98, 625
PfoI TCCNGGA 2 cut(s) 395, 1052
PleI GAGTC 2 cut(s) 322, 977
PluTI GGCGCC 2 cut(s) 696, 1004
PmaCI CACGTG 3 cut(s) 505, 516, 853
PmlI CACGTG 3 cut(s) 505, 516, 853
PpsI GAGTC 2 cut(s) 322, 977
Ppu21I YACGTR 3 cut(s) 505, 516, 853
Psp124BI GAGCTC 2 cut(s) 677, 923
PspCI CACGTG 3 cut(s) 505, 516, 853
PspFI CCCAGC 1 cut(s) 290
PspN4I GGNNCC 7 cut(s) 289, 522, 694, 883, 1002, 1051, 1068
PspPI GGNCC 3 cut(s) 287, 327, 881
PstI CTGCAG 1 cut(s) 573
PsuI RGATCY 3 cut(s) 253, 1066, 1133
PvuII CAGCTG 3 cut(s) 411, 911, 1013
RsaI GTAC 5 cut(s) 134, 260, 818, 907, 1111
RsaNI GTAC 5 cut(s) 133, 259, 817, 906, 1110
RseI CAYNNNNRTG 1 cut(s) 338
SacI GAGCTC 2 cut(s) 677, 923
SacII CCGCGG 1 cut(s) 613
SapI GCTCTTC 1 cut(s) 503
SaqAI TTAA 2 cut(s) 1061, 1089
Sau3AI GATC 6 cut(s) 253, 386, 606, 811, 1066, 1133
Sau96I GGNCC 3 cut(s) 287, 327, 881
SchI GAGTC 2 cut(s) 323, 978
ScrFI CCNGG 4 cut(s) 397, 539, 1054, 1085
SduI GDGCHC 5 cut(s) 404, 453, 515, 677, 923
SfaNI GCATC 2 cut(s) 214, 306
SfcI CTRYAG 1 cut(s) 569
SfoI GGCGCC 2 cut(s) 694, 1002
Sfr303I CCGCGG 1 cut(s) 613
SgrBI CCGCGG 1 cut(s) 613
SinI GGWCC 1 cut(s) 287
SmiMI CAYNNNNRTG 1 cut(s) 338
SphI GCATGC 1 cut(s) 154
Sse9I AATT 6 cut(s) 108, 679, 739, 864, 1072, 1115
SspDI GGCGCC 2 cut(s) 692, 1000
SspMI CTAG 1 cut(s) 278
SstI GAGCTC 2 cut(s) 677, 923
StyD4I CCNGG 4 cut(s) 395, 537, 1052, 1083
StyI CCWWGG 1 cut(s) 877
TaaI ACNGT 2 cut(s) 406, 1033
TaiI ACGT 8 cut(s) 125, 306, 395, 507, 518, 722, 855, 1061
TaqI TCGA 6 cut(s) 171, 389, 489, 497, 530, 798
TaqII GACCGA 1 cut(s) 275
TasI AATT 6 cut(s) 108, 679, 739, 864, 1072, 1115
TatI WGTACW 1 cut(s) 905
TauI GCSGC 7 cut(s) 272, 275, 328, 363, 426, 1001, 1043
TfiI GAWTC 4 cut(s) 82, 88, 98, 625
Tru1I TTAA 2 cut(s) 1061, 1089
Tru9I TTAA 2 cut(s) 1061, 1089
TscAI CASTG 3 cut(s) 774, 1024, 1038
TseFI GTSAC 2 cut(s) 62, 754
Tsp45I GTSAC 2 cut(s) 62, 754
TspDTI ATGAA 3 cut(s) 156, 322, 1087
TspRI CASTG 3 cut(s) 774, 1024, 1038
VneI GTGCAC 1 cut(s) 449
VpaK11BI GGWCC 1 cut(s) 287
XapI RAATTY 3 cut(s) 108, 739, 864
XceI RCATGY 2 cut(s) 154, 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 685
XspI CTAG 1 cut(s) 278
ZraI GACGTC 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.