TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HMA | PF00403 | 32 - 87 | 6.7e-14 | Heavy-metal-associated domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 297 |
| AccB1I | GGYRCC | 1 cut(s) | 337 |
| AccI | GTMKAC | 1 cut(s) | 425 |
| AciI | CCGC | 1 cut(s) | 266 |
| AclWI | GGATC | 3 cut(s) | 173, 186, 276 |
| AcoI | YGGCCR | 1 cut(s) | 275 |
| AcvI | CACGTG | 1 cut(s) | 401 |
| AcyI | GRCGYC | 1 cut(s) | 294 |
| AfaI | GTAC | 2 cut(s) | 285, 350 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 37, 226 |
| AgsI | TTSAA | 1 cut(s) | 173 |
| AjnI | CCWGG | 1 cut(s) | 343 |
| AleI | CACNNNNGTG | 1 cut(s) | 416 |
| AluBI | AGCT | 4 cut(s) | 28, 58, 76, 196 |
| AluI | AGCT | 4 cut(s) | 28, 58, 76, 196 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 1 cut(s) | 25 |
| AlwI | GGATC | 3 cut(s) | 173, 186, 276 |
| Ama87I | CYCGRG | 1 cut(s) | 317 |
| AoxI | GGCC | 1 cut(s) | 275 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| AspS9I | GGNCC | 1 cut(s) | 217 |
| AsuC2I | CCSGG | 2 cut(s) | 318, 319 |
| AsuHPI | GGTGA | 1 cut(s) | 430 |
| AvaI | CYCGRG | 1 cut(s) | 317 |
| AvaII | GGWCC | 1 cut(s) | 217 |
| AxyI | CCTNAGG | 1 cut(s) | 381 |
| BamHI | GGATCC | 1 cut(s) | 178 |
| BanI | GGYRCC | 1 cut(s) | 337 |
| BanII | GRGCYC | 3 cut(s) | 30, 43, 316 |
| BbrPI | CACGTG | 1 cut(s) | 401 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BbvI | GCAGC | 1 cut(s) | 85 |
| BccI | CCATC | 1 cut(s) | 97 |
| BceAI | ACGGC | 2 cut(s) | 262, 447 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 14, 48 |
| BciT130I | CCWGG | 1 cut(s) | 345 |
| BcnI | CCSGG | 2 cut(s) | 318, 319 |
| BcoDI | GTCTC | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BfmI | CTRYAG | 1 cut(s) | 77 |
| BisI | GCNGC | 1 cut(s) | 74 |
| BlsI | GCNGC | 1 cut(s) | 75 |
| Bme1390I | CCNGG | 3 cut(s) | 318, 319, 345 |
| Bme18I | GGWCC | 1 cut(s) | 217 |
| BmeT110I | CYCGRG | 1 cut(s) | 317 |
| BmgT120I | GGNCC | 1 cut(s) | 217 |
| BmiI | GGNNCC | 4 cut(s) | 180, 219, 315, 339 |
| BmrFI | CCNGG | 3 cut(s) | 318, 319, 345 |
| BmsI | GCATC | 3 cut(s) | 244, 256, 313 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BpuMI | CCSGG | 2 cut(s) | 318, 319 |
| BsaAI | YACGTR | 2 cut(s) | 352, 401 |
| BsaHI | GRCGYC | 1 cut(s) | 294 |
| BsaJI | CCNNGG | 5 cut(s) | 308, 317, 318, 344, 414 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 37, 226 |
| Bse21I | CCTNAGG | 1 cut(s) | 381 |
| BseBI | CCWGG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 5 cut(s) | 308, 317, 318, 344, 414 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 37, 226 |
| BseMII | CTCAG | 2 cut(s) | 25, 395 |
| BseXI | GCAGC | 1 cut(s) | 85 |
| BshFI | GGCC | 1 cut(s) | 277 |
| BshNI | GGYRCC | 1 cut(s) | 337 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsiHKCI | CYCGRG | 1 cut(s) | 317 |
| BsiSI | CCGG | 1 cut(s) | 318 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 37, 226 |
| BsmAI | GTCTC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 277 |
| BsoBI | CYCGRG | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 3 cut(s) | 30, 43, 316 |
| Bsp143I | GATC | 2 cut(s) | 178, 268 |
| Bsp19I | CCATGG | 1 cut(s) | 308 |
| BspACI | CCGC | 1 cut(s) | 266 |
| BspANI | GGCC | 1 cut(s) | 277 |
| BspCNI | CTCAG | 2 cut(s) | 24, 394 |
| BspLI | GGNNCC | 4 cut(s) | 180, 219, 315, 339 |
| BspPI | GGATC | 3 cut(s) | 173, 186, 276 |
| BspT107I | GGYRCC | 1 cut(s) | 337 |
| BssECI | CCNNGG | 5 cut(s) | 308, 317, 318, 344, 414 |
| BssMI | GATC | 2 cut(s) | 178, 268 |
| BssNAI | GTATAC | 1 cut(s) | 426 |
| BssNI | GRCGYC | 1 cut(s) | 294 |
| BssT1I | CCWWGG | 1 cut(s) | 308 |
| Bst1107I | GTATAC | 1 cut(s) | 426 |
| Bst2UI | CCWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 202 |
| Bst6I | CTCTTC | 1 cut(s) | 121 |
| BstACI | GRCGYC | 1 cut(s) | 294 |
| BstBAI | YACGTR | 2 cut(s) | 352, 401 |
| BstC8I | GCNNGC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 2 cut(s) | 11, 381 |
| BstDSI | CCRYGG | 1 cut(s) | 308 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstKTI | GATC | 2 cut(s) | 181, 271 |
| BstMAI | GTCTC | 1 cut(s) | 25 |
| BstMBI | GATC | 2 cut(s) | 178, 268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 117, 193, 320 |
| BstNI | CCWGG | 1 cut(s) | 345 |
| BstSCI | CCNGG | 3 cut(s) | 316, 317, 343 |
| BstSFI | CTRYAG | 1 cut(s) | 77 |
| BstV1I | GCAGC | 1 cut(s) | 85 |
| BstX2I | RGATCY | 2 cut(s) | 178, 268 |
| BstYI | RGATCY | 2 cut(s) | 178, 268 |
| BstZ17I | GTATAC | 1 cut(s) | 426 |
| Bsu36I | CCTNAGG | 1 cut(s) | 381 |
| BsuRI | GGCC | 1 cut(s) | 277 |
| BtgI | CCRYGG | 1 cut(s) | 308 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| BtsIMutI | CAGTG | 2 cut(s) | 147, 198 |
| Cac8I | GCNNGC | 1 cut(s) | 194 |
| Cfr13I | GGNCC | 1 cut(s) | 217 |
| Cfr9I | CCCGGG | 1 cut(s) | 317 |
| Csp6I | GTAC | 2 cut(s) | 284, 349 |
| CviAII | CATG | 2 cut(s) | 151, 309 |
| CviQI | GTAC | 2 cut(s) | 284, 349 |
| DdeI | CTNAG | 2 cut(s) | 11, 381 |
| DpnI | GATC | 2 cut(s) | 180, 270 |
| DpnII | GATC | 2 cut(s) | 178, 268 |
| EaeI | YGGCCR | 1 cut(s) | 275 |
| Eam1104I | CTCTTC | 1 cut(s) | 121 |
| EarI | CTCTTC | 1 cut(s) | 121 |
| EciI | GGCGGA | 1 cut(s) | 281 |
| Ecl136II | GAGCTC | 1 cut(s) | 28 |
| Eco130I | CCWWGG | 1 cut(s) | 308 |
| Eco24I | GRGCYC | 3 cut(s) | 30, 43, 316 |
| Eco47I | GGWCC | 1 cut(s) | 217 |
| Eco53kI | GAGCTC | 1 cut(s) | 28 |
| Eco72I | CACGTG | 1 cut(s) | 401 |
| Eco81I | CCTNAGG | 1 cut(s) | 381 |
| Eco88I | CYCGRG | 1 cut(s) | 317 |
| EcoICRI | GAGCTC | 1 cut(s) | 28 |
| EcoRII | CCWGG | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 1 cut(s) | 308 |
| EcoT38I | GRGCYC | 3 cut(s) | 30, 43, 316 |
| ErhI | CCWWGG | 1 cut(s) | 308 |
| FaeI | CATG | 2 cut(s) | 154, 312 |
| FaiI | YATR | 9 cut(s) | 51, 152, 213, 282, 289, 310, 327, 426, 470 |
| FatI | CATG | 2 cut(s) | 150, 308 |
| FblI | GTMKAC | 1 cut(s) | 425 |
| Fnu4HI | GCNGC | 1 cut(s) | 74 |
| FokI | GGATG | 1 cut(s) | 291 |
| FriOI | GRGCYC | 3 cut(s) | 30, 43, 316 |
| Fsp4HI | GCNGC | 1 cut(s) | 74 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 74 |
| HaeIII | GGCC | 1 cut(s) | 277 |
| HapII | CCGG | 1 cut(s) | 318 |
| Hin1I | GRCGYC | 1 cut(s) | 294 |
| Hin1II | CATG | 2 cut(s) | 154, 312 |
| HinfI | GANTC | 2 cut(s) | 46, 159 |
| HpaII | CCGG | 1 cut(s) | 318 |
| HphI | GGTGA | 1 cut(s) | 430 |
| Hpy166II | GTNNAC | 2 cut(s) | 217, 426 |
| Hpy188I | TCNGA | 2 cut(s) | 25, 45 |
| Hpy188III | TCNNGA | 1 cut(s) | 61 |
| Hpy8I | GTNNAC | 2 cut(s) | 217, 426 |
| Hpy99I | CGWCG | 4 cut(s) | 296, 299, 302, 433 |
| HpyAV | CCTTC | 4 cut(s) | 107, 140, 256, 328 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 202 |
| HpyCH4IV | ACGT | 4 cut(s) | 294, 351, 360, 400 |
| HpyCH4V | TGCA | 1 cut(s) | 235 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 117, 193, 320 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 381 |
| HpySE526I | ACGT | 4 cut(s) | 294, 351, 360, 400 |
| Hsp92I | GRCGYC | 1 cut(s) | 294 |
| Hsp92II | CATG | 2 cut(s) | 154, 312 |
| Kzo9I | GATC | 2 cut(s) | 178, 268 |
| LmnI | GCTCC | 2 cut(s) | 33, 319 |
| LpnPI | CCDG | 7 cut(s) | 229, 240, 330, 331, 357, 368, 387 |
| Lsp1109I | GCAGC | 1 cut(s) | 85 |
| LweI | GCATC | 3 cut(s) | 244, 256, 313 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeII | ACGT | 4 cut(s) | 294, 351, 360, 400 |
| MaeIII | GTNAC | 2 cut(s) | 160, 440 |
| MalI | GATC | 2 cut(s) | 180, 270 |
| MboI | GATC | 2 cut(s) | 178, 268 |
| MboII | GAAGA | 5 cut(s) | 76, 112, 138, 145, 271 |
| MflI | RGATCY | 2 cut(s) | 178, 268 |
| MhlI | GDGCHC | 3 cut(s) | 30, 43, 316 |
| MlyI | GAGTC | 2 cut(s) | 55, 168 |
| MnlI | CCTC | 3 cut(s) | 348, 390, 409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 416 |
| MspI | CCGG | 1 cut(s) | 318 |
| MspR9I | CCNGG | 3 cut(s) | 318, 319, 345 |
| MvaI | CCWGG | 1 cut(s) | 345 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 117, 193, 320 |
| NciI | CCSGG | 2 cut(s) | 318, 319 |
| NcoI | CCATGG | 1 cut(s) | 308 |
| NdeII | GATC | 2 cut(s) | 178, 268 |
| NlaIII | CATG | 2 cut(s) | 154, 312 |
| NlaIV | GGNNCC | 4 cut(s) | 180, 219, 315, 339 |
| NmuCI | GTSAC | 2 cut(s) | 160, 440 |
| OliI | CACNNNNGTG | 1 cut(s) | 416 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 297, 357 |
| PflFI | GACNNNGTC | 1 cut(s) | 296 |
| PkrI | GCNGC | 1 cut(s) | 75 |
| PleI | GAGTC | 2 cut(s) | 54, 167 |
| PmaCI | CACGTG | 1 cut(s) | 401 |
| PmlI | CACGTG | 1 cut(s) | 401 |
| PpsI | GAGTC | 2 cut(s) | 54, 167 |
| Ppu21I | YACGTR | 2 cut(s) | 352, 401 |
| Psp124BI | GAGCTC | 1 cut(s) | 30 |
| Psp6I | CCWGG | 1 cut(s) | 343 |
| PspCI | CACGTG | 1 cut(s) | 401 |
| PspGI | CCWGG | 1 cut(s) | 343 |
| PspN4I | GGNNCC | 4 cut(s) | 180, 219, 315, 339 |
| PspPI | GGNCC | 1 cut(s) | 217 |
| PsuI | RGATCY | 2 cut(s) | 178, 268 |
| PsyI | GACNNNGTC | 1 cut(s) | 296 |
| RsaI | GTAC | 2 cut(s) | 285, 350 |
| RsaNI | GTAC | 2 cut(s) | 284, 349 |
| RseI | CAYNNNNRTG | 1 cut(s) | 416 |
| SacI | GAGCTC | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 74 |
| Sau3AI | GATC | 2 cut(s) | 178, 268 |
| Sau96I | GGNCC | 1 cut(s) | 217 |
| SchI | GAGTC | 2 cut(s) | 55, 168 |
| ScrFI | CCNGG | 3 cut(s) | 318, 319, 345 |
| SduI | GDGCHC | 3 cut(s) | 30, 43, 316 |
| SfaNI | GCATC | 3 cut(s) | 244, 256, 313 |
| SfcI | CTRYAG | 1 cut(s) | 77 |
| SinI | GGWCC | 1 cut(s) | 217 |
| SmaI | CCCGGG | 1 cut(s) | 319 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 416 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| SsiI | CCGC | 1 cut(s) | 266 |
| SspMI | CTAG | 1 cut(s) | 36 |
| SstI | GAGCTC | 1 cut(s) | 30 |
| StyD4I | CCNGG | 3 cut(s) | 316, 317, 343 |
| StyI | CCWWGG | 1 cut(s) | 308 |
| TaaI | ACNGT | 2 cut(s) | 85, 202 |
| TaiI | ACGT | 4 cut(s) | 297, 354, 363, 403 |
| TaqI | TCGA | 2 cut(s) | 250, 300 |
| TscAI | CASTG | 2 cut(s) | 147, 205 |
| TseFI | GTSAC | 2 cut(s) | 160, 440 |
| TseI | GCWGC | 1 cut(s) | 73 |
| Tsp45I | GTSAC | 2 cut(s) | 160, 440 |
| TspDTI | ATGAA | 1 cut(s) | 167 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| TspMI | CCCGGG | 1 cut(s) | 317 |
| TspRI | CASTG | 2 cut(s) | 147, 205 |
| Tth111I | GACNNNGTC | 1 cut(s) | 296 |
| VpaK11BI | GGWCC | 1 cut(s) | 217 |
| XmaI | CCCGGG | 1 cut(s) | 317 |
| XmiI | GTMKAC | 1 cut(s) | 425 |
| XspI | CTAG | 1 cut(s) | 36 |
| ZraI | GACGTC | 1 cut(s) | 295 |