RchiOBHm_Chr6g0244821

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000105
Physical Location & Seq
Forward (+)
804438 .. 806145
1708 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21940

Sequence Viewer

Length: 1350 bp
ATGCATGATTTGCTACAAGAAATGGGCCGGGAAATAGTTCGTCGAGAGTCTCCGAAAGAGCCAGGCAAACGTAGTAGATTATGGTCTCGTGAAGAAATCCACAATGTGCTGAAGAAAAATAAGGGAACAGAAGCAATCCAAGGCATGGTAATGGAGTGGTCTGAATTAGAAGTGGCTCATTGGAATCCAGAAGCCTTGTCAAATTTGTCTCAACTTATTCTTCTCCATATTCATAATGTGGACCTTCCTAAAGGCCTTACCTGTCTTCCTAATTCCTTGAGACTCCTGGAATGGCCTGGCTGTCCGTTAAGATCTCTCCCACGAACGTTCGAACCAGATGAACTTATTGAACTTAACTTGTGTCACAGCAATATTGAACATCTTTGGAAGGGAACAAAGAATTTTAACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAACATTGTGGAGATCCCAGACCTTGCAGGTGTTCAGAATCTTGAGAGTTTAGAGCTCGAAGGATGTAAGAGTTTGGTAAGAATCCATCAATCCCTTGGATGTCTCAAAAAGCTTATTGTCCTGAATCTCAAAGACTGCAAAAGTCTTGAGAATCTGCCAGGTAGAATTGAAATGGAATCTCTTGAAAAATTAATTCTTTCTAACTGCTCCAAAATTAAAAAGATTCCCGAGTTTGATGGAAATATGGAGCGTCTGTCTGTGCTTCATCTTGACGGGACTGCCATTGAGGAACTGCCTGTTTCAATTGGACGCCTGAGTGGCCTTGTGTCATTGAATCTAAGTAACTGCAGAAATCTTGTTCGTCTTCCAAGCACCATCGTTCATTTATGCAAAGTAGTTTGGGGATCTTTAAATAAGTTCTTGCCTTCTGGATTGCAAAAAGTGAATGGAGAGCCAATGAGTTTCAGCTTGCCTAGGCTGTGTAATTTAATAGATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAATGAATTCAGTTACTTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTAGTTCGTCTTCCTTCAGGCATTGGGTCGCTTTCCAAGCTTGAGTACTGTAAGTTGAAGAATTGCAAGAGACTTGAAGAGCTGTCAGACCTTCCATTGAATAGTAACCTAGTTTTAAAGGCAGATGGTTGTACTTCACTGAAATACTTGTTTGATGCATCAAATTTTAACAGATTAAACGAATCATGTTTTGGTTCAGGTTTCAGTTTCATGAATTGCGTCAATCTAAAGGGCAATCAAGGATGCAATAGCATGGCATTTGAAATGCTGAAGGCATTCATGTATCAGGGACTCTCTAGTGAGACGGAAACTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

449

Amino Acids

50.4

Weight (kDa)

7.48

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 206 - 373 2.7e-11 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 227 - 281 1.6e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 1 cut(s) 458
AccB7I CCANNNNNTGG 1 cut(s) 145
AclI AACGTT 1 cut(s) 326
AclWI GGATC 2 cut(s) 448, 853
AcsI RAATTY 4 cut(s) 202, 400, 983, 1195
AcuI CTGAAG 3 cut(s) 131, 1032, 1322
AcyI GRCGYC 1 cut(s) 751
AdeI CACNNNGTG 1 cut(s) 106
AfaI GTAC 2 cut(s) 1079, 1165
AfiI CCNNNNNNNGG 1 cut(s) 145
AjnI CCWGG 4 cut(s) 61, 285, 295, 598
AjuI GAANNNNNNNTTGG 2 cut(s) 1206, 1238
AluBI AGCT 5 cut(s) 496, 553, 909, 1072, 1114
AluI AGCT 5 cut(s) 496, 553, 909, 1072, 1114
Alw21I GWGCWC 1 cut(s) 498
Alw26I GTCTC 7 cut(s) 54, 90, 213, 274, 548, 1096, 1328
AlwI GGATC 2 cut(s) 448, 853
Ama87I CYCGRG 1 cut(s) 668
AoxI GGCC 4 cut(s) 25, 253, 293, 760
ApoI RAATTY 4 cut(s) 202, 400, 983, 1195
AseI ATTAAT 1 cut(s) 632
Asp700I GAANNNNTTC 2 cut(s) 36, 1307
AspA2I CCTAGG 1 cut(s) 914
AspS9I GGNCC 2 cut(s) 25, 241
AsuC2I CCSGG 1 cut(s) 29
AsuHPI GGTGA 2 cut(s) 974, 1018
AsuII TTCGAA 1 cut(s) 330
AvaI CYCGRG 1 cut(s) 668
AvaII GGWCC 1 cut(s) 241
AvrII CCTAGG 1 cut(s) 914
BanII GRGCYC 1 cut(s) 498
BauI CACGAG 1 cut(s) 87
BbsI GAAGAC 3 cut(s) 257, 797, 1034
Bbv12I GWGCWC 1 cut(s) 498
BccI CCATC 4 cut(s) 534, 671, 824, 1151
BciT130I CCWGG 4 cut(s) 63, 287, 297, 600
BcnI CCSGG 1 cut(s) 29
BcoDI GTCTC 7 cut(s) 54, 90, 213, 274, 548, 1096, 1328
BfaI CTAG 3 cut(s) 915, 1142, 1329
BfmI CTRYAG 1 cut(s) 787
BfuAI ACCTGC 1 cut(s) 458
BglI GCCNNNNNGGC 1 cut(s) 759
BglII AGATCT 2 cut(s) 311, 934
BlnI CCTAGG 1 cut(s) 914
BmcAI AGTACT 1 cut(s) 1079
Bme1390I CCNGG 5 cut(s) 29, 63, 287, 297, 600
Bme18I GGWCC 1 cut(s) 241
BmeT110I CYCGRG 1 cut(s) 668
BmgT120I GGNCC 2 cut(s) 25, 241
BmrFI CCNGG 5 cut(s) 29, 63, 287, 297, 600
BmsI GCATC 3 cut(s) 1177, 1199, 1265
BpiI GAAGAC 3 cut(s) 257, 797, 1034
Bpu14I TTCGAA 1 cut(s) 330
BpuEI CTTGAG 4 cut(s) 298, 503, 608, 1094
BpuMI CCSGG 1 cut(s) 29
BsaHI GRCGYC 1 cut(s) 751
BsaI GGTCTC 1 cut(s) 90
BsaJI CCNNGG 3 cut(s) 139, 535, 914
BsaXI ACNNNNNCTCC 2 cut(s) 680, 710
Bsc4I CCNNNNNNNGG 1 cut(s) 145
BseBI CCWGG 4 cut(s) 63, 287, 297, 600
BseDI CCNNGG 3 cut(s) 139, 535, 914
BseGI GGATG 3 cut(s) 509, 545, 1280
BseLI CCNNNNNNNGG 1 cut(s) 145
BseMII CTCAG 2 cut(s) 746, 935
BshFI GGCC 4 cut(s) 27, 255, 295, 762
BsiHKAI GWGCWC 1 cut(s) 498
BsiHKCI CYCGRG 1 cut(s) 668
BsiSI CCGG 1 cut(s) 28
BslFI GGGAC 2 cut(s) 730, 1335
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 7 cut(s) 54, 90, 213, 274, 548, 1096, 1328
BsmBI CGTCTC 1 cut(s) 1328
BsmFI GGGAC 2 cut(s) 730, 1335
BsmI GAATGC 1 cut(s) 1307
BsnI GGCC 4 cut(s) 27, 255, 295, 762
Bso31I GGTCTC 1 cut(s) 90
BsoBI CYCGRG 1 cut(s) 668
Bsp119I TTCGAA 1 cut(s) 330
Bsp1286I GDGCHC 1 cut(s) 498
Bsp143I GATC 4 cut(s) 311, 453, 845, 934
BspANI GGCC 4 cut(s) 27, 255, 295, 762
BspCNI CTCAG 2 cut(s) 747, 936
BspHI TCATGA 1 cut(s) 1242
BspMAI CTGCAG 1 cut(s) 791
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 2 cut(s) 448, 853
BspQI GCTCTTC 1 cut(s) 1104
BspT104I TTCGAA 1 cut(s) 330
BspTNI GGTCTC 1 cut(s) 90
BssECI CCNNGG 3 cut(s) 139, 535, 914
BssMI GATC 4 cut(s) 311, 453, 845, 934
BssNI GRCGYC 1 cut(s) 751
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 3 cut(s) 139, 535, 914
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 4 cut(s) 63, 287, 297, 600
Bst4CI ACNGT 1 cut(s) 1082
Bst6I CTCTTC 1 cut(s) 1104
BstACI GRCGYC 1 cut(s) 751
BstAPI GCANNNNNTGC 1 cut(s) 10
BstBI TTCGAA 1 cut(s) 330
BstC8I GCNNGC 1 cut(s) 911
BstDEI CTNAG 4 cut(s) 755, 779, 944, 1019
BstEII GGTNACC 1 cut(s) 1006
BstF5I GGATG 3 cut(s) 509, 545, 1280
BstKTI GATC 4 cut(s) 314, 456, 848, 937
BstMAI GTCTC 7 cut(s) 54, 90, 213, 274, 548, 1096, 1328
BstMBI GATC 4 cut(s) 311, 453, 845, 934
BstMWI GCNNNNNNNGC 3 cut(s) 10, 759, 1069
BstNI CCWGG 4 cut(s) 63, 287, 297, 600
BstPI GGTNACC 1 cut(s) 1006
BstSCI CCNGG 5 cut(s) 27, 61, 285, 295, 598
BstSFI CTRYAG 1 cut(s) 787
BstV2I GAAGAC 3 cut(s) 257, 797, 1034
BstX2I RGATCY 4 cut(s) 311, 453, 845, 934
BstYI RGATCY 4 cut(s) 311, 453, 845, 934
BsuRI GGCC 4 cut(s) 27, 255, 295, 762
BtsCI GGATG 3 cut(s) 509, 545, 1280
BtsIMutI CAGTG 1 cut(s) 1169
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 1 cut(s) 911
CciI TCATGA 1 cut(s) 1242
Cfr13I GGNCC 2 cut(s) 25, 241
CseI GACGC 3 cut(s) 680, 759, 1240
Csp6I GTAC 2 cut(s) 1078, 1164
CviAII CATG 6 cut(s) 5, 145, 1218, 1243, 1285, 1312
CviQI GTAC 2 cut(s) 1078, 1164
DdeI CTNAG 4 cut(s) 755, 779, 944, 1019
DpnI GATC 4 cut(s) 313, 455, 847, 936
DpnII GATC 4 cut(s) 311, 453, 845, 934
DraI TTTAAA 2 cut(s) 852, 1149
DraIII CACNNNGTG 1 cut(s) 106
Eam1104I CTCTTC 1 cut(s) 1104
EarI CTCTTC 1 cut(s) 1104
Ecl136II GAGCTC 1 cut(s) 496
Eco130I CCWWGG 3 cut(s) 139, 535, 914
Eco147I AGGCCT 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 498
Eco31I GGTCTC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 496
Eco57I CTGAAG 3 cut(s) 131, 1032, 1322
Eco88I CYCGRG 1 cut(s) 668
Eco91I GGTNACC 1 cut(s) 1006
EcoICRI GAGCTC 1 cut(s) 496
EcoO65I GGTNACC 1 cut(s) 1006
EcoRI GAATTC 1 cut(s) 983
EcoRII CCWGG 4 cut(s) 61, 285, 295, 598
EcoT14I CCWWGG 3 cut(s) 139, 535, 914
EcoT22I ATGCAT 2 cut(s) 6, 1192
EcoT38I GRGCYC 1 cut(s) 498
ErhI CCWWGG 3 cut(s) 139, 535, 914
Esp3I CGTCTC 1 cut(s) 1328
FaeI CATG 6 cut(s) 8, 148, 1221, 1246, 1288, 1315
FaqI GGGAC 2 cut(s) 730, 1335
FatI CATG 6 cut(s) 4, 144, 1217, 1242, 1284, 1311
FokI GGATG 3 cut(s) 516, 552, 1287
FriOI GRGCYC 1 cut(s) 498
FspBI CTAG 3 cut(s) 915, 1142, 1329
HaeIII GGCC 4 cut(s) 27, 255, 295, 762
HapII CCGG 1 cut(s) 28
HgaI GACGC 3 cut(s) 680, 759, 1240
Hin1I GRCGYC 1 cut(s) 751
Hin1II CATG 6 cut(s) 8, 148, 1221, 1246, 1288, 1315
HindIII AAGCTT 2 cut(s) 551, 1070
HpaII CCGG 1 cut(s) 28
HphI GGTGA 2 cut(s) 974, 1018
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 5 cut(s) 54, 163, 477, 939, 1120
Hpy8I GTNNAC 1 cut(s) 241
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 8 cut(s) 254, 382, 494, 876, 959, 1056, 1133, 1297
HpyCH4III ACNGT 1 cut(s) 1082
HpyCH4IV ACGT 2 cut(s) 70, 326
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 759, 1069
HpyF3I CTNAG 4 cut(s) 755, 779, 944, 1019
HpySE526I ACGT 2 cut(s) 70, 326
Hsp92I GRCGYC 1 cut(s) 751
Hsp92II CATG 6 cut(s) 8, 148, 1221, 1246, 1288, 1315
Kzo9I GATC 4 cut(s) 311, 453, 845, 934
LguI GCTCTTC 1 cut(s) 1104
LmnI GCTCC 3 cut(s) 653, 688, 968
LweI GCATC 3 cut(s) 1177, 1199, 1265
MaeI CTAG 3 cut(s) 915, 1142, 1329
MaeII ACGT 2 cut(s) 70, 326
MaeIII GTNAC 5 cut(s) 362, 782, 989, 1006, 1136
MalI GATC 4 cut(s) 313, 455, 847, 936
MboI GATC 4 cut(s) 311, 453, 845, 934
MboII GAAGA 8 cut(s) 104, 124, 212, 257, 797, 1034, 1102, 1121
MfeI CAATTG 1 cut(s) 744
MflI RGATCY 4 cut(s) 311, 453, 845, 934
MhlI GDGCHC 1 cut(s) 498
MlyI GAGTC 3 cut(s) 56, 276, 1317
MnlI CCTC 2 cut(s) 721, 1009
Mph1103I ATGCAT 2 cut(s) 6, 1192
MroXI GAANNNNTTC 2 cut(s) 36, 1307
MslI CAYNNNNRTG 1 cut(s) 149
MspI CCGG 1 cut(s) 28
MspR9I CCNGG 5 cut(s) 29, 63, 287, 297, 600
MunI CAATTG 1 cut(s) 744
Mva1269I GAATGC 1 cut(s) 1307
MvaI CCWGG 4 cut(s) 63, 287, 297, 600
MwoI GCNNNNNNNGC 3 cut(s) 10, 759, 1069
NciI CCSGG 1 cut(s) 29
NdeII GATC 4 cut(s) 311, 453, 845, 934
NlaIII CATG 6 cut(s) 8, 148, 1221, 1246, 1288, 1315
NmuCI GTSAC 2 cut(s) 362, 1006
NsiI ATGCAT 2 cut(s) 6, 1192
NspV TTCGAA 1 cut(s) 330
PagI TCATGA 1 cut(s) 1242
PaqCI CACCTGC 1 cut(s) 458
PceI AGGCCT 1 cut(s) 255
PciSI GCTCTTC 1 cut(s) 1104
PctI GAATGC 1 cut(s) 1307
PdmI GAANNNNTTC 2 cut(s) 36, 1307
PflMI CCANNNNNTGG 1 cut(s) 145
PfoI TCCNGGA 1 cut(s) 285
PleI GAGTC 3 cut(s) 55, 276, 1317
PpsI GAGTC 3 cut(s) 55, 276, 1317
PshBI ATTAAT 1 cut(s) 632
Psp124BI GAGCTC 1 cut(s) 498
Psp1406I AACGTT 1 cut(s) 326
Psp6I CCWGG 4 cut(s) 61, 285, 295, 598
PspEI GGTNACC 1 cut(s) 1006
PspGI CCWGG 4 cut(s) 61, 285, 295, 598
PspPI GGNCC 2 cut(s) 25, 241
PstI CTGCAG 1 cut(s) 791
PsuI RGATCY 4 cut(s) 311, 453, 845, 934
RsaI GTAC 2 cut(s) 1079, 1165
RsaNI GTAC 2 cut(s) 1078, 1164
RseI CAYNNNNRTG 1 cut(s) 149
SacI GAGCTC 1 cut(s) 498
SapI GCTCTTC 1 cut(s) 1104
Sau3AI GATC 4 cut(s) 311, 453, 845, 934
Sau96I GGNCC 2 cut(s) 25, 241
ScaI AGTACT 1 cut(s) 1079
SchI GAGTC 3 cut(s) 56, 276, 1317
ScrFI CCNGG 5 cut(s) 29, 63, 287, 297, 600
SduI GDGCHC 1 cut(s) 498
SfaNI GCATC 3 cut(s) 1177, 1199, 1265
SfcI CTRYAG 1 cut(s) 787
SfuI TTCGAA 1 cut(s) 330
SinI GGWCC 1 cut(s) 241
SmiMI CAYNNNNRTG 1 cut(s) 149
SmlI CTYRAG 4 cut(s) 277, 482, 587, 1073
SmoI CTYRAG 4 cut(s) 277, 482, 587, 1073
SseBI AGGCCT 1 cut(s) 255
SspI AATATT 1 cut(s) 373
SspMI CTAG 3 cut(s) 915, 1142, 1329
SstI GAGCTC 1 cut(s) 498
StuI AGGCCT 1 cut(s) 255
StyD4I CCNGG 5 cut(s) 27, 61, 285, 295, 598
StyI CCWWGG 3 cut(s) 139, 535, 914
TaaI ACNGT 1 cut(s) 1082
TaiI ACGT 2 cut(s) 73, 329
TaqI TCGA 3 cut(s) 43, 330, 498
TatI WGTACW 2 cut(s) 1077, 1163
TscAI CASTG 1 cut(s) 1176
TseFI GTSAC 2 cut(s) 362, 1006
Tsp45I GTSAC 2 cut(s) 362, 1006
TspDTI ATGAA 9 cut(s) 221, 354, 409, 695, 812, 996, 1231, 1259, 1300
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 1 cut(s) 1176
Van91I CCANNNNNTGG 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 241
VspI ATTAAT 1 cut(s) 632
XapI RAATTY 4 cut(s) 202, 400, 983, 1195
XcmI CCANNNNNNNNNTGG 1 cut(s) 533
XmaJI CCTAGG 1 cut(s) 914
XmnI GAANNNNTTC 2 cut(s) 36, 1307
XspI CTAG 3 cut(s) 915, 1142, 1329
ZrmI AGTACT 1 cut(s) 1079
Zsp2I ATGCAT 2 cut(s) 6, 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.