RLG00000017048

resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
12415112 .. 12420445
5334 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017048

Sequence Viewer

Length: 3345 bp
ATGACCAGCCAAACAGATAGTCCTTCTTCTTCATCTTCCCCTCTTGGATGGACGTACGATGTGTTCCTCAGTTTCAGCGGTGTAGATACACGCAAAAAATTTACAGACCATCTTTACACTGCTCTGACGCAGAAAGGGATATTCACATTCAGAGATGAAGAAGAACTTGAGAGGGGGAAGGCAATCAATCCAAAGCTCTTGAAAGCCATTGAAGAATCAAGATATGTAATAGTCATTCTTTCAAGAAATTACGCCAGTTCAAGATGGTGTTTGGATGAGCTTGCAAAAGCCGTGGAGTGCATGAAAGCCATGGGACAAACAATCCTGCCGGTGTTCTACGATGTGGATCCATCTGATGTGCGAAAACAGACGGGGGATCATTTCGGAAAGGCCTTTCTGAAGCACAGAGAGGACTTTAAAGGCAATCCAGACAAGGTGCAGAGGTGGAGAGATGCTCTTTCTCAAGTAGGCAATCTCTCTGGATGGGATTTGCGAGATGGATATGAATCAAAAGTAATTGGAGATGTAGTTGGAAATATTTTCACTCCATTAAATCAGCTGGCAATACCCATATTACCGTCAACTTCTTCTCCTCCTCCTCCTCCTCGATGGAAATACGATGTATATGTCAGTTTCCATGGGGATGGTCCTCACTTGGGTTTTGTTGATCATCTGTATGATGCACTAGATAAGAATGCAATTTGTACCTTTAGAGATAACAAAATACTTGAGAGAGGATCATCCATTTCCTCAGTAGTTCTTAAGGCTATTGAGGAGTCAAGAGTTGCCCTCATCATTGTTTCAGCAAACTATGCTTCTTCATCGTGGTGCTTGGATGAGCTTTGGAATATTTTTCAATGCAAAAGTATGGGGCGAGGTATCATACCAGTCTACTACGACATGAATATATTGCTATTACGGCAACAAAGGGGAGTTGATAAGATCCTTTTGAGACCGGAAGTAACGGAACATGAAGAAGTTTATTGGGAGAAATGGGACAAACTAAATAAGAGGCAACAAGAGTGCAGGGATGCTTTGGTACAGCTGTGCTACATAGACGGGTTTGCTCTGGACTCCGAGAATGTGTCAGAAACTATAGGTCAAATTTGTGGCAGAGTAAAGCAATCGTATACACCACCTACAAATGTACACAAGGGCATGATAGGACTACAAAAGGGCATGGTAGGACTGGAATCCCGCATTCATGATTTTGAACGTAATTATGTATGTCCACATTTTCCTAATGTACGTATCATAGGAATCCATGGAATGCGAGGAATAGGTAAGACAACTGTTGCCCAAGCAGTTTATCATCATATTCGTGATGGTTTTGAAAGTAGCTGCTTTCTTTCCAATGTTAGAGAAAGGTCCAAAAAGGATGGTCTAGTCTCTTTACAAAAAGAACTTCTTTCCAGAATGCTGTCTACAGAAATTGGAGTAGAGGATGAGTATGCAGGAACTGCTCTGATAAAAAAAAGGTTATGCAGGCGAAGAGTACTTGTTGTCATTGATGATGTGGATGATCTAGCACAATTGGAAAATTTGGCTGGATGTCATGACTGGTTCGGCCTGGGGAGTAGAATTATCATAACTACCACAGATGTTCATTTGTTGAAGGCATATGGTGATGGTGTTGATAGTATATATGAGGCGACTGGATTACTATATGGTGAATCTCTTGAACTTTTATGTTTGAAGGCTTTTAAGAAGAGCCAACCGCCTGAAGATCATTTGCACCTGTGCCACCATATTTTGTATTATGCACACGGGCTGCCATTAGCTCTTGAGGTCATTGGTTCCTTTCTATGTGGTAGAAACATGGGAGAATGGGCAAGTGCCATTGGTAGGCTAAAGAATAAACCGGAAAGAAGTATTATCGATGTGCTTCAGATAAGTTTCGATGGACTAGGGGAAACAGAAAAGGAAATATTCCTACATATTGCATGCTTTTATAAGGGAAAATCCAGGGATCGTGTAATACAAATACTAGACTATTGTCAGCTTTCCCCTGTCATTGGTTTAAGTGTTCTTGTTGACAAATCTCTCATTACTATTTCCAACAGCACACTGTTGATGCATGATTTGCTACAAGAAATGGGCTGGGAAATAATTCGCCGAGAGTCTCCTAATAATCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCCACACCGTGCTGAAGAAAGCTAAGAACTTTGACAAGTTGAAGTTCATCAAACTCTGCCATTCTCAAAGCCTATGTGAGATCCCAGACTTCACAGGCGTTCAAAATCTTGAACGATTAGATCTTGAAGGATGTAAAAAGTTGGTTAGAATTCATCCATCCCTTGGAGTTCTCAAAAAGCTTATACTATTGAATCTAAAAGATTGTGAAAGGCTCAAGAGTCTGCCAGATAAAATCAAAATGGAATCTCTCGAAACTCTAATTCTTTCAAACTGCTCAAGTCTTAAGAAGATCCCTGAGTTTGCTGGAAATATGGAACGTTTGTTGGTGCTTAATCTTGACAAGACTGCCATCGAAACACTGCCTCCCTCAATTGAGCGCTTAAGTGGCCTTGTTTCCTTGGATTTAAGCAACTGCAAAAATCTTGTTTCTCTTCCTCACACCATTAATGAATTGAAGTCCCTTCAAAGTCTTAGTCTTTCTGGATGCTTGAAACTTGGCAAACATCAGGGTAGTATGAGGGAGATGGAGTATATGGAGGGAAATGGTGCAAGTAGGACTGCTGTAGCAGAATTGCCATCATGGAAAGATAGTTTAAGCCATTGTTTTGAAGTGGTTCGGGAGCATTTCTCATGGTCCTTGCCTTCTAGATCAATGCAAAGAATCAATACAGAACCAATGAGTATGCAGTTGCATTTATCTGGACTCTGTAATTTAACATATCTAAACATAAGCAATTGCAATCTCGGTGATGGAGCATTTCGCAGCAACTTTGGCTGTTTTCCCTCATTGGTGGCATTGAATCTGGGTGGAAATGATTTTGTTAAGCTTCCTTCAAGCATCAAATCGTTTCTCAAGCTTGAAAACCTTAACTTGGAGAATTGCAAGAGGCTTAAAGAGTTGTCAGAGCTTCCATCAAATAGTAAATTGGATGTAAGGGCAGATGGCTGTTCATCGCTGGCAATGCTGTTTGATGCATCCAATTTCAATAGATTAGAGAAATCATATTTCAATTTCATCAATTGCTTCAGACTAAATGACAATCAAGGCTGCAGTAACGTAGCATTTGAAATGCTGAAGACATTCATTCCTCAGGTTATCTCGAATGCAAGGGAAACTTTTCAAATTAATTCCCTTGATGAAAGTAGGGAGTGTAGATTTTCTGTTCTGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1115

Amino Acids

125.88

Weight (kDa)

7.31

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 19 - 186 5.7e-52 TIR domain
TIR_2 PF13676 21 - 117 4.6e-18 TIR domain
TIR PF01582 205 - 334 8.7e-27 TIR domain
TIR_2 PF13676 208 - 302 3.1e-10 TIR domain
NB-ARC PF00931 415 - 571 4e-18 NB-ARC domain
NACHT PF05729 418 - 514 9.1e-06 NACHT domain
WHD_ROQ1 PF23282 638 - 708 4.2e-20 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 805 - 890 1e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 826 - 1061 5.9e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1953
AccB7I CCANNNNNTGG 1 cut(s) 2333
AccI GTMKAC 3 cut(s) 891, 1130, 1424
AciI CCGC 3 cut(s) 78, 1198, 1718
AclI AACGTT 1 cut(s) 2488
AclWI GGATC 8 cut(s) 341, 354, 384, 745, 937, 1977, 2245, 2455
AcsI RAATTY 4 cut(s) 98, 1104, 1540, 2319
AcuI CTGAAG 6 cut(s) 419, 1743, 1871, 2204, 3181, 3266
AdeI CACNNNGTG 1 cut(s) 2179
AfaI GTAC 6 cut(s) 56, 706, 1041, 1149, 1248, 1497
AfeI AGCGCT 1 cut(s) 2549
AfiI CCNNNNNNNGG 5 cut(s) 656, 1845, 2015, 2333, 3043
AflII CTTAAG 3 cut(s) 761, 2453, 2551
AjnI CCWGG 3 cut(s) 1569, 1964, 2134
Alw26I GTCTC 4 cut(s) 946, 1393, 2127, 2163
AlwI GGATC 8 cut(s) 341, 354, 384, 745, 937, 1977, 2245, 2455
AlwNI CAGNNNCTG 1 cut(s) 1460
Aor51HI AGCGCT 1 cut(s) 2549
AoxI GGCC 3 cut(s) 390, 1567, 2557
ApeKI GCWGC 4 cut(s) 1341, 1771, 2934, 3219
ApoI RAATTY 4 cut(s) 98, 1104, 1540, 2319
ArsI GACNNNNNNTTYG 3 cut(s) 36, 2629, 2661
AseI ATTAAT 2 cut(s) 2616, 3297
Asp700I GAANNNNTTC 4 cut(s) 2109, 2784, 3251, 3288
AspLEI GCGC 1 cut(s) 2550
AspS9I GGNCC 3 cut(s) 647, 1368, 2805
AsuHPI GGTGA 3 cut(s) 1637, 1682, 2930
AvaII GGWCC 3 cut(s) 647, 1368, 2805
AxyI CCTNAGG 1 cut(s) 3261
BaeI ACNNNNGTAYC 2 cut(s) 1031, 1064
BamHI GGATCC 1 cut(s) 346
BbsI GAAGAC 2 cut(s) 2172, 3254
BbvI GCAGC 4 cut(s) 1328, 1758, 2946, 3206
BceAI ACGGC 2 cut(s) 275, 935
BciT130I CCWGG 3 cut(s) 1571, 1966, 2136
BclI TGATCA 1 cut(s) 667
BcoDI GTCTC 4 cut(s) 946, 1393, 2127, 2163
BfaI CTAG 6 cut(s) 686, 1385, 1526, 1907, 1988, 2817
BfmI CTRYAG 4 cut(s) 1095, 1425, 2733, 3220
BfoI RGCGCY 1 cut(s) 2551
BfrI CTTAAG 3 cut(s) 761, 2453, 2551
BglII AGATCT 1 cut(s) 2290
BisI GCNGC 4 cut(s) 1342, 1772, 2935, 3220
BlsI GCNGC 4 cut(s) 1343, 1773, 2936, 3221
BmcAI AGTACT 1 cut(s) 1497
Bme1390I CCNGG 3 cut(s) 1571, 1966, 2136
Bme18I GGWCC 3 cut(s) 647, 1368, 2805
BmgT120I GGNCC 3 cut(s) 647, 1368, 2805
BmiI GGNNCC 2 cut(s) 348, 1798
BmrFI CCNGG 3 cut(s) 1571, 1966, 2136
BmsI GCATC 8 cut(s) 442, 670, 1021, 2064, 2645, 3018, 3133, 3155
BoxI GACNNNNGTC 1 cut(s) 1995
BpiI GAAGAC 2 cut(s) 2172, 3254
BplI GAGNNNNNCTC 6 cut(s) 439, 471, 774, 806, 2783, 2815
BpuEI CTTGAG 7 cut(s) 188, 447, 749, 1805, 2369, 2431, 3008
Bsa29I ATCGAT 1 cut(s) 1878
BsaAI YACGTR 1 cut(s) 1250
BsaBI GATNNNNATC 2 cut(s) 345, 505
BsaI GGTCTC 2 cut(s) 946, 2163
BsaJI CCNNGG 8 cut(s) 291, 309, 637, 1264, 1570, 1965, 2332, 2568
BsaWI WCCGGW 2 cut(s) 955, 1861
BsaXI ACNNNNNCTCC 8 cut(s) 513, 543, 574, 604, 2518, 2548, 2684, 2714
Bsc4I CCNNNNNNNGG 5 cut(s) 656, 1845, 2015, 2333, 3043
Bse118I RCCGGY 1 cut(s) 328
Bse1I ACTGG 5 cut(s) 255, 887, 1194, 1565, 1660
Bse21I CCTNAGG 1 cut(s) 3261
Bse3DI GCAATG 1 cut(s) 3138
Bse8I GATNNNNATC 2 cut(s) 345, 505
BseBI CCWGG 3 cut(s) 1571, 1966, 2136
BseCI ATCGAT 1 cut(s) 1878
BseDI CCNNGG 8 cut(s) 291, 309, 637, 1264, 1570, 1965, 2332, 2568
BseJI GATNNNNATC 2 cut(s) 345, 505
BseLI CCNNNNNNNGG 5 cut(s) 656, 1845, 2015, 2333, 3043
BseMI GCAATG 1 cut(s) 3138
BseMII CTCAG 5 cut(s) 82, 765, 2457, 3275, 3329
BseNI ACTGG 5 cut(s) 255, 887, 1194, 1565, 1660
BseRI GAGGAG 6 cut(s) 582, 585, 588, 591, 594, 788
BseXI GCAGC 4 cut(s) 1328, 1758, 2946, 3206
BseYI CCCAGC 1 cut(s) 2100
BsgI GTGCAG 2 cut(s) 458, 1045
BshFI GGCC 3 cut(s) 392, 1569, 2559
BshVI ATCGAT 1 cut(s) 1878
BsiSI CCGG 3 cut(s) 329, 956, 1862
BsiWI CGTACG 1 cut(s) 54
BslFI GGGAC 3 cut(s) 327, 1010, 2614
BslI CCNNNNNNNGG 5 cut(s) 656, 1845, 2015, 2333, 3043
BsmAI GTCTC 4 cut(s) 946, 1393, 2127, 2163
BsmFI GGGAC 3 cut(s) 327, 1010, 2614
BsmI GAATGC 5 cut(s) 700, 1200, 1275, 1422, 3280
BsnI GGCC 3 cut(s) 392, 1569, 2559
Bso31I GGTCTC 2 cut(s) 946, 2163
Bsp1407I TGTACA 1 cut(s) 1147
Bsp19I CCATGG 3 cut(s) 309, 637, 1264
BspACI CCGC 3 cut(s) 78, 1198, 1718
BspANI GGCC 3 cut(s) 392, 1569, 2559
BspCNI CTCAG 5 cut(s) 81, 764, 2458, 3274, 3330
BspDI ATCGAT 1 cut(s) 1878
BspHI TCATGA 3 cut(s) 1204, 1555, 2161
BspLI GGNNCC 2 cut(s) 348, 1798
BspMAI CTGCAG 1 cut(s) 3224
BspPI GGATC 8 cut(s) 341, 354, 384, 745, 937, 1977, 2245, 2455
BspQI GCTCTTC 1 cut(s) 1703
BspTI CTTAAG 3 cut(s) 761, 2453, 2551
BspTNI GGTCTC 2 cut(s) 946, 2163
BsrDI GCAATG 1 cut(s) 3138
BsrFI RCCGGY 1 cut(s) 328
BsrGI TGTACA 1 cut(s) 1147
BsrI ACTGG 5 cut(s) 255, 887, 1194, 1565, 1660
BssAI RCCGGY 1 cut(s) 328
BssECI CCNNGG 8 cut(s) 291, 309, 637, 1264, 1570, 1965, 2332, 2568
BssNAI GTATAC 1 cut(s) 1131
BssT1I CCWWGG 5 cut(s) 309, 637, 1264, 2332, 2568
Bst1107I GTATAC 1 cut(s) 1131
Bst2UI CCWGG 3 cut(s) 1571, 1966, 2136
Bst4CI ACNGT 4 cut(s) 579, 1294, 2070, 2179
Bst6I CTCTTC 3 cut(s) 1486, 1703, 2607
BstAFI CTTAAG 3 cut(s) 761, 2453, 2551
BstAPI GCANNNNNTGC 3 cut(s) 812, 1460, 2083
BstAUI TGTACA 1 cut(s) 1147
BstBAI YACGTR 1 cut(s) 1250
BstC8I GCNNGC 5 cut(s) 282, 561, 1487, 1945, 3129
BstDEI CTNAG 7 cut(s) 68, 751, 2193, 2466, 2642, 3261, 3338
BstDSI CCRYGG 4 cut(s) 291, 309, 637, 1264
BstH2I RGCGCY 1 cut(s) 2551
BstHHI GCGC 1 cut(s) 2550
BstMAI GTCTC 4 cut(s) 946, 1393, 2127, 2163
BstMWI GCNNNNNNNGC 7 cut(s) 812, 919, 1460, 2083, 2556, 2943, 3133
BstNI CCWGG 3 cut(s) 1571, 1966, 2136
BstNSI RCATGY 1 cut(s) 1947
BstPAI GACNNNNGTC 1 cut(s) 1995
BstSCI CCNGG 3 cut(s) 1569, 1964, 2134
BstSFI CTRYAG 4 cut(s) 1095, 1425, 2733, 3220
BstSNI TACGTA 1 cut(s) 1250
BstV1I GCAGC 4 cut(s) 1328, 1758, 2946, 3206
BstV2I GAAGAC 2 cut(s) 2172, 3254
BstX2I RGATCY 5 cut(s) 346, 942, 2250, 2290, 2460
BstXI CCANNNNNNTGG 1 cut(s) 644
BstYI RGATCY 5 cut(s) 346, 942, 2250, 2290, 2460
BstZ17I GTATAC 1 cut(s) 1131
Bsu15I ATCGAT 1 cut(s) 1878
Bsu36I CCTNAGG 1 cut(s) 3261
BsuRI GGCC 3 cut(s) 392, 1569, 2559
BsuTUI ATCGAT 1 cut(s) 1878
BtgI CCRYGG 4 cut(s) 291, 309, 637, 1264
BtgZI GCGATG 1 cut(s) 3108
BtsI GCAGTG 2 cut(s) 117, 2528
BtsIMutI CAGTG 3 cut(s) 117, 2066, 2528
Cac8I GCNNGC 5 cut(s) 282, 561, 1487, 1945, 3129
CaiI CAGNNNCTG 1 cut(s) 1460
CciI TCATGA 3 cut(s) 1204, 1555, 2161
CfoI GCGC 1 cut(s) 2550
Cfr10I RCCGGY 1 cut(s) 328
Cfr13I GGNCC 3 cut(s) 647, 1368, 2805
ClaI ATCGAT 1 cut(s) 1878
CseI GACGC 1 cut(s) 136
Csp6I GTAC 6 cut(s) 55, 705, 1040, 1148, 1247, 1496
CspCI CAANNNNNGTGG 2 cut(s) 273, 308
CviQI GTAC 6 cut(s) 55, 705, 1040, 1148, 1247, 1496
DdeI CTNAG 7 cut(s) 68, 751, 2193, 2466, 2642, 3261, 3338
DraI TTTAAA 1 cut(s) 418
DraIII CACNNNGTG 1 cut(s) 2179
Eam1104I CTCTTC 3 cut(s) 1486, 1703, 2607
EarI CTCTTC 3 cut(s) 1486, 1703, 2607
Eco105I TACGTA 1 cut(s) 1250
Eco130I CCWWGG 5 cut(s) 309, 637, 1264, 2332, 2568
Eco147I AGGCCT 1 cut(s) 392
Eco31I GGTCTC 2 cut(s) 946, 2163
Eco47I GGWCC 3 cut(s) 647, 1368, 2805
Eco47III AGCGCT 1 cut(s) 2549
Eco57I CTGAAG 6 cut(s) 419, 1743, 1871, 2204, 3181, 3266
Eco81I CCTNAGG 1 cut(s) 3261
EcoRI GAATTC 1 cut(s) 2319
EcoRII CCWGG 3 cut(s) 1569, 1964, 2134
EcoT14I CCWWGG 5 cut(s) 309, 637, 1264, 2332, 2568
EcoT22I ATGCAT 2 cut(s) 2079, 3148
ErhI CCWWGG 5 cut(s) 309, 637, 1264, 2332, 2568
FalI AAGNNNNNCTT 6 cut(s) 150, 182, 1392, 1424, 3271, 3303
FaqI GGGAC 3 cut(s) 327, 1010, 2614
FauI CCCGC 1 cut(s) 1205
FauNDI CATATG 1 cut(s) 1621
FbaI TGATCA 1 cut(s) 667
FblI GTMKAC 3 cut(s) 891, 1130, 1424
Fnu4HI GCNGC 4 cut(s) 1342, 1772, 2935, 3220
Fsp4HI GCNGC 4 cut(s) 1342, 1772, 2935, 3220
FspBI CTAG 6 cut(s) 686, 1385, 1526, 1907, 1988, 2817
GlaI GCGC 1 cut(s) 2549
GluI GCNGC 4 cut(s) 1342, 1772, 2935, 3220
GsaI CCCAGC 1 cut(s) 2104
HaeII RGCGCY 1 cut(s) 2551
HaeIII GGCC 3 cut(s) 392, 1569, 2559
HapII CCGG 3 cut(s) 329, 956, 1862
HgaI GACGC 1 cut(s) 136
HhaI GCGC 1 cut(s) 2550
Hin6I GCGC 1 cut(s) 2548
HinP1I GCGC 1 cut(s) 2548
HincII GTYRAC 2 cut(s) 582, 2035
HindII GTYRAC 2 cut(s) 582, 2035
HindIII AAGCTT 3 cut(s) 2348, 2996, 3026
HpaII CCGG 3 cut(s) 329, 956, 1862
HphI GGTGA 3 cut(s) 1637, 1682, 2930
Hpy166II GTNNAC 7 cut(s) 582, 892, 1131, 1150, 1232, 1425, 2035
Hpy8I GTNNAC 7 cut(s) 582, 892, 1131, 1150, 1232, 1425, 2035
HpyAV CCTTC 8 cut(s) 33, 172, 1609, 1690, 2291, 2642, 2823, 3012
HpyCH4III ACNGT 4 cut(s) 579, 1294, 2070, 2179
HpyCH4IV ACGT 6 cut(s) 53, 1216, 1249, 2143, 2488, 3228
HpyF10VI GCNNNNNNNGC 7 cut(s) 812, 919, 1460, 2083, 2556, 2943, 3133
HpyF3I CTNAG 7 cut(s) 68, 751, 2193, 2466, 2642, 3261, 3338
HpySE526I ACGT 6 cut(s) 53, 1216, 1249, 2143, 2488, 3228
HspAI GCGC 1 cut(s) 2548
Ksp22I TGATCA 1 cut(s) 667
LguI GCTCTTC 1 cut(s) 1703
LmnI GCTCC 2 cut(s) 2791, 2924
Lsp1109I GCAGC 4 cut(s) 1328, 1758, 2946, 3206
LweI GCATC 8 cut(s) 442, 670, 1021, 2064, 2645, 3018, 3133, 3155
MaeI CTAG 6 cut(s) 686, 1385, 1526, 1907, 1988, 2817
MaeII ACGT 6 cut(s) 53, 1216, 1249, 2143, 2488, 3228
MaeIII GTNAC 2 cut(s) 961, 3224
MfeI CAATTG 4 cut(s) 1532, 2541, 2905, 3190
MflI RGATCY 5 cut(s) 346, 942, 2250, 2290, 2460
MlyI GAGTC 5 cut(s) 785, 1067, 2129, 2398, 2868
MmeI TCCRAC 2 cut(s) 511, 2082
Mph1103I ATGCAT 2 cut(s) 2079, 3148
MroXI GAANNNNTTC 4 cut(s) 2109, 2784, 3251, 3288
MslI CAYNNNNRTG 4 cut(s) 642, 675, 826, 1320
MspA1I CMGCKG 3 cut(s) 78, 559, 1045
MspCI CTTAAG 3 cut(s) 761, 2453, 2551
MspI CCGG 3 cut(s) 329, 956, 1862
MspR9I CCNGG 3 cut(s) 1571, 1966, 2136
MunI CAATTG 4 cut(s) 1532, 2541, 2905, 3190
Mva1269I GAATGC 5 cut(s) 700, 1200, 1275, 1422, 3280
MvaI CCWGG 3 cut(s) 1571, 1966, 2136
MwoI GCNNNNNNNGC 7 cut(s) 812, 919, 1460, 2083, 2556, 2943, 3133
NcoI CCATGG 3 cut(s) 309, 637, 1264
NdeI CATATG 1 cut(s) 1621
NlaIV GGNNCC 2 cut(s) 348, 1798
NmeAIII GCCGAG 1 cut(s) 2141
NsiI ATGCAT 2 cut(s) 2079, 3148
NspI RCATGY 1 cut(s) 1947
PaeI GCATGC 1 cut(s) 1947
PagI TCATGA 3 cut(s) 1204, 1555, 2161
PceI AGGCCT 1 cut(s) 392
PciSI GCTCTTC 1 cut(s) 1703
PctI GAATGC 5 cut(s) 700, 1200, 1275, 1422, 3280
PdmI GAANNNNTTC 4 cut(s) 2109, 2784, 3251, 3288
PfeI GAWTC 9 cut(s) 215, 506, 1193, 1260, 1673, 2362, 2414, 2832, 2971
Pfl23II CGTACG 1 cut(s) 54
PflMI CCANNNNNTGG 1 cut(s) 2333
PkrI GCNGC 4 cut(s) 1343, 1773, 2936, 3221
PleI GAGTC 5 cut(s) 784, 1067, 2128, 2397, 2868
PpsI GAGTC 5 cut(s) 784, 1067, 2128, 2397, 2868
Ppu21I YACGTR 1 cut(s) 1250
PshAI GACNNNNGTC 1 cut(s) 1995
PshBI ATTAAT 2 cut(s) 2616, 3297
PsiI TTATAA 1 cut(s) 1953
Psp1406I AACGTT 1 cut(s) 2488
Psp6I CCWGG 3 cut(s) 1569, 1964, 2134
PspFI CCCAGC 1 cut(s) 2100
PspGI CCWGG 3 cut(s) 1569, 1964, 2134
PspLI CGTACG 1 cut(s) 54
PspN4I GGNNCC 2 cut(s) 348, 1798
PspPI GGNCC 3 cut(s) 647, 1368, 2805
PsrI GAACNNNNNNTAC 2 cut(s) 47, 79
PstI CTGCAG 1 cut(s) 3224
PstNI CAGNNNCTG 1 cut(s) 1460
PsuI RGATCY 5 cut(s) 346, 942, 2250, 2290, 2460
PvuII CAGCTG 2 cut(s) 559, 1045
RsaI GTAC 6 cut(s) 56, 706, 1041, 1149, 1248, 1497
RsaNI GTAC 6 cut(s) 55, 705, 1040, 1148, 1247, 1496
RseI CAYNNNNRTG 4 cut(s) 642, 675, 826, 1320
SapI GCTCTTC 1 cut(s) 1703
SatI GCNGC 4 cut(s) 1342, 1772, 2935, 3220
Sau96I GGNCC 3 cut(s) 647, 1368, 2805
ScaI AGTACT 1 cut(s) 1497
SchI GAGTC 5 cut(s) 785, 1067, 2129, 2398, 2868
ScrFI CCNGG 3 cut(s) 1571, 1966, 2136
SfaNI GCATC 8 cut(s) 442, 670, 1021, 2064, 2645, 3018, 3133, 3155
SfcI CTRYAG 4 cut(s) 1095, 1425, 2733, 3220
SinI GGWCC 3 cut(s) 647, 1368, 2805
SmiMI CAYNNNNRTG 4 cut(s) 642, 675, 826, 1320
SnaBI TACGTA 1 cut(s) 1250
SphI GCATGC 1 cut(s) 1947
SseBI AGGCCT 1 cut(s) 392
SsiI CCGC 3 cut(s) 78, 1198, 1718
SspI AATATT 3 cut(s) 538, 850, 1929
SspMI CTAG 6 cut(s) 686, 1385, 1526, 1907, 1988, 2817
StuI AGGCCT 1 cut(s) 392
StyD4I CCNGG 3 cut(s) 1569, 1964, 2134
StyI CCWWGG 5 cut(s) 309, 637, 1264, 2332, 2568
TaaI ACNGT 4 cut(s) 579, 1294, 2070, 2179
TaiI ACGT 6 cut(s) 56, 1219, 1252, 2146, 2491, 3231
TaqI TCGA 6 cut(s) 607, 1878, 1899, 2421, 2523, 3272
TatI WGTACW 2 cut(s) 1147, 1495
TfiI GAWTC 9 cut(s) 215, 506, 1193, 1260, 1673, 2362, 2414, 2832, 2971
TscAI CASTG 3 cut(s) 124, 2073, 2535
TseI GCWGC 4 cut(s) 1341, 1771, 2934, 3219
TspGWI ACGGA 1 cut(s) 980
TspRI CASTG 3 cut(s) 124, 2073, 2535
Van91I CCANNNNNTGG 1 cut(s) 2333
Vha464I CTTAAG 3 cut(s) 761, 2453, 2551
VpaK11BI GGWCC 3 cut(s) 647, 1368, 2805
VspI ATTAAT 2 cut(s) 2616, 3297
XapI RAATTY 4 cut(s) 98, 1104, 1540, 2319
XbaI TCTAGA 1 cut(s) 2816
XceI RCATGY 1 cut(s) 1947
XmiI GTMKAC 3 cut(s) 891, 1130, 1424
XmnI GAANNNNTTC 4 cut(s) 2109, 2784, 3251, 3288
XspI CTAG 6 cut(s) 686, 1385, 1526, 1907, 1988, 2817
ZrmI AGTACT 1 cut(s) 1497
Zsp2I ATGCAT 2 cut(s) 2079, 3148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.