Rroxscaffold_7G00217180

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000105
Physical Location & Seq
Reverse (-)
67690584 .. 67697219
6636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00217180.1

Sequence Viewer

Length: 2040 bp
ATGAGCCAGGGAACGGAAAAAATCCGAGCCATGGTAATGGAGTTGCCTGAGTTAGAAGTGGCTCATTGGAAACCAGAAGCCTTTTCAAATTTGTCACAACTCAGTCTTCTCCATATTCGTAACGTGGATCTTCCCAAAGGCATCACTTTTCTGTCTAATTCCTTGAGACTCCTTGAATGGAATGGGTACCCCTTAAGATCCCTCCCACAGAATTTTGAACCAGACGAACTTTTTGAACTTAACTTGTGCCACAGCAACATTGAACACCTCTGGAAAGGAGCAAAGAATTTTGACAAGTTGAAGTTCATCAAACTATGCCATTCTCAAAAAATAGTCCAGACCCCAGACCTCACAGGCGTTCAAAATCTTGAGACTTTAGATCTTGAAGGATGTAAGACTTTGGTAAAACTTCATCAATCTGTCGGACAACTCAAAAGGCTTATTGTATTGAATCTTAAAGATTGTGAGAGCCTCGAGAATCTGCCAAGTAAGATTGAAATGGAATCTCTTGAAACTTTGATTCTTTCTAACTGCTCAAAAGTTAAAAAGATTCCCGAGTTCGCTGGAAATATGAAGCGTTTATCAAAGCTTTATCTCAATGAGACTGCCATTGAAAAACTACCTGTGTCAATTGGATGCCTGAGTGGCCTTGCTTCACTGAATCTTAGCAACTGCAAAAATCTTGTATGCCATGCAAGCACCTTAGAACTGCTTAGTAGATTGGAGTCTCTTAAAAATCTTGATCTTTCTGGATGTTTGAAACTCGGCAAACAGGATAGTGCGAGGGAGAATGGTGCATTTAGAACTGCCGTAAATCATCTTACAAAACGTGGTTGTGAAGTTGTTGGGAAATATTTGTCATGGTCCTTGCCTTCTAGATTGGTGCAAAGAGCTGATATAGAACCAATGAGTATGCAGTTGCCTGCATCTGATCTGTGTTATTCTACAGAGCAAAATGCAAATACATCAGTGAGTATCCGGTTGCCACTATCTCGTCTATGTAATTTAACAGATCTAAACATAAGTAACTGCAATCTTGTTGACGCTGCATTTGCCAGCTTTGCCTGTTTTCCCTCCTTAGTGGCACTAAATCTGAGTGGAAATAATTTTGTTAAGCTTCCTCCAAGCATCAGGTCCTGTTTTAAGCTTCAAAACATTAATTTGGAGAATTGCAAGACACTTCAAGAGTTGTCAGGACTTCCATCAAATAGTAAATTGGATGTGAGGGCAGATGGTTGTTCTTCACTGAAAATGCTGTTTGATGTATCCAATTTCAATCGATTGGAGAAATCATATTTCAATTTCATCAATTGCTTCAAACTAAATGACAATCAGGGCAGCTGTAACATAGCATTTGAAATGCTGAGGATATTCCTTAATCAGCAAGTTTCTAGTGTGACGGAAACTTTTCAAATTGTAATTCCTGGAAGTAGAATTCCTGAGTGGTTTCATCATCGAAGATTTGCGAGTTCATTAACTGTAGACCTACTTCCAGATTGGAATCAGGGTAGGTTTTTGGGATTTGTTTTGTGTGCTGTTTTTGTACTCCATGAGCACCGTCAGGTTGATGAGCTTGATATCTGTCAGTTCAAGACTTTTAAGGCCACTCATCATCTTGTATGTTGCCTGAAGCTGAATGGAAGAGAACTAGAAGTATACGGCAAACAGCCTGCATTTCGCTTTAGCGAACAATTTTGCCAGGTTGAGTCAGATCACCTTTGGATATTCTATGTGTCCCGTGATAAATACTTTGGTACAGATTGGTGGCATAACAGTTGCAGTCAGCTTGAGTTCTTATTTGAAACAAGAGGGCCAGGCCTGAGGGTGAAGGAGTGTGGGGTACGTCTGATATATGAGCAAGATGTGCTAGAGTTGAACCAAACAATAACTCAATCAAGCAGTAGGGTGTCTCCTCCATATGAGGATATATTGACTGATTTTGAGAACCAAGTTGAAGGGGAAACCATTCACCCAAAAAAAAAGTTGAAAGGGGAAACCAGTGGTACTGGTAGTAGAACCTGCACCCTTGAAGAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

679

Amino Acids

77.01

Weight (kDa)

6.79

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 110 - 251 5.5e-10 Leucine-rich repeat region
LRR_13 PF23286 168 - 255 3.7e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
C-JID PF20160 474 - 622 1.8e-17 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2027
Acc65I GGTACC 1 cut(s) 186
AccB1I GGYRCC 1 cut(s) 186
AccI GTMKAC 2 cut(s) 1482, 1656
AclWI GGATC 2 cut(s) 135, 192
AcsI RAATTY 4 cut(s) 88, 211, 286, 1434
AcuI CTGAAG 1 cut(s) 1649
AfaI GTAC 5 cut(s) 188, 1545, 1756, 1842, 2005
AfiI CCNNNNNNNGG 2 cut(s) 13, 31
AflII CTTAAG 1 cut(s) 193
AjnI CCWGG 4 cut(s) 6, 1423, 1698, 1813
AluBI AGCT 9 cut(s) 589, 893, 1059, 1117, 1147, 1341, 1573, 1633, 1786
AluI AGCT 9 cut(s) 589, 893, 1059, 1117, 1147, 1341, 1573, 1633, 1786
Alw21I GWGCWC 1 cut(s) 1557
Alw26I GTCTC 5 cut(s) 160, 365, 596, 732, 1914
AlwI GGATC 2 cut(s) 135, 192
AlwNI CAGNNNCTG 1 cut(s) 1137
Ama87I CYCGRG 2 cut(s) 473, 554
AoxI GGCC 4 cut(s) 646, 1602, 1811, 1816
ApeKI GCWGC 2 cut(s) 1046, 1338
ApoI RAATTY 4 cut(s) 88, 211, 286, 1434
ArsI GACNNNNNNTTYG 4 cut(s) 215, 247, 1034, 1066
AseI ATTAAT 1 cut(s) 1158
Asp700I GAANNNNTTC 2 cut(s) 1407, 1965
Asp718I GGTACC 1 cut(s) 186
AspS9I GGNCC 3 cut(s) 864, 1134, 1811
AsuHPI GGTGA 3 cut(s) 1706, 1837, 1961
AvaI CYCGRG 2 cut(s) 473, 554
AvaII GGWCC 2 cut(s) 864, 1134
AxyI CCTNAGG 1 cut(s) 1820
BanI GGYRCC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 1473, 1505
BbsI GAAGAC 1 cut(s) 98
Bbv12I GWGCWC 1 cut(s) 1557
BbvCI CCTCAGC 1 cut(s) 1364
BbvI GCAGC 2 cut(s) 1033, 1350
BccI CCATC 2 cut(s) 1210, 1226
BceAI ACGGC 2 cut(s) 794, 1675
BciT130I CCWGG 4 cut(s) 8, 1425, 1700, 1815
BciVI GTATCC 2 cut(s) 986, 1276
BcoDI GTCTC 5 cut(s) 160, 365, 596, 732, 1914
BfaI CTAG 4 cut(s) 876, 1392, 1649, 1868
BfmI CTRYAG 3 cut(s) 945, 1479, 2036
BfrI CTTAAG 1 cut(s) 193
BfuAI ACCTGC 1 cut(s) 2027
BfuI GTATCC 2 cut(s) 986, 1276
BglI GCCNNNNNGGC 1 cut(s) 645
BglII AGATCT 2 cut(s) 379, 1012
BisI GCNGC 2 cut(s) 1047, 1339
BlsI GCNGC 2 cut(s) 1048, 1340
Bme1390I CCNGG 4 cut(s) 8, 1425, 1700, 1815
Bme18I GGWCC 2 cut(s) 864, 1134
BmeT110I CYCGRG 2 cut(s) 473, 554
BmgT120I GGNCC 3 cut(s) 864, 1134, 1811
BmiI GGNNCC 1 cut(s) 188
BmrFI CCNGG 4 cut(s) 8, 1425, 1700, 1815
BmsI GCATC 4 cut(s) 150, 626, 935, 1137
BpiI GAAGAC 1 cut(s) 98
Bpu10I CCTNAGC 1 cut(s) 1364
BpuEI CTTGAG 3 cut(s) 184, 389, 1808
Bsa29I ATCGAT 1 cut(s) 1279
BsaBI GATNNNNATC 1 cut(s) 1500
BsaJI CCNNGG 2 cut(s) 7, 30
BsaWI WCCGGW 1 cut(s) 978
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 31
Bse1I ACTGG 2 cut(s) 1998, 2011
Bse21I CCTNAGG 1 cut(s) 1820
Bse8I GATNNNNATC 1 cut(s) 1500
BseBI CCWGG 4 cut(s) 8, 1425, 1700, 1815
BseCI ATCGAT 1 cut(s) 1279
BseDI CCNNGG 2 cut(s) 7, 30
BseGI GGATG 4 cut(s) 395, 641, 758, 1225
BseJI GATNNNNATC 1 cut(s) 1500
BseLI CCNNNNNNNGG 2 cut(s) 13, 31
BseMII CTCAG 7 cut(s) 39, 115, 632, 1085, 1355, 1431, 1811
BseNI ACTGG 2 cut(s) 1998, 2011
BseRI GAGGAG 1 cut(s) 1902
BseXI GCAGC 2 cut(s) 1033, 1350
BsgI GTGCAG 1 cut(s) 2005
BshFI GGCC 4 cut(s) 648, 1604, 1813, 1818
BshNI GGYRCC 1 cut(s) 186
BshVI ATCGAT 1 cut(s) 1279
BsiHKAI GWGCWC 1 cut(s) 1557
BsiHKCI CYCGRG 2 cut(s) 473, 554
BsiSI CCGG 1 cut(s) 979
BslFI GGGAC 1 cut(s) 1720
BslI CCNNNNNNNGG 2 cut(s) 13, 31
BsmAI GTCTC 5 cut(s) 160, 365, 596, 732, 1914
BsmFI GGGAC 1 cut(s) 1720
BsnI GGCC 4 cut(s) 648, 1604, 1813, 1818
BsoBI CYCGRG 2 cut(s) 473, 554
Bsp1286I GDGCHC 1 cut(s) 1557
Bsp143I GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
Bsp19I CCATGG 1 cut(s) 30
BspANI GGCC 4 cut(s) 648, 1604, 1813, 1818
BspCNI CTCAG 7 cut(s) 40, 114, 633, 1086, 1356, 1432, 1812
BspDI ATCGAT 1 cut(s) 1279
BspLI GGNNCC 1 cut(s) 188
BspMI ACCTGC 1 cut(s) 2027
BspPI GGATC 2 cut(s) 135, 192
BspT107I GGYRCC 1 cut(s) 186
BspTI CTTAAG 1 cut(s) 193
BsrI ACTGG 2 cut(s) 1998, 2011
BssECI CCNNGG 2 cut(s) 7, 30
BssMI GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
BssNAI GTATAC 1 cut(s) 1657
BssT1I CCWWGG 1 cut(s) 30
Bst1107I GTATAC 1 cut(s) 1657
Bst2UI CCWGG 4 cut(s) 8, 1425, 1700, 1815
Bst4CI ACNGT 3 cut(s) 1480, 1559, 1775
Bst6I CTCTTC 1 cut(s) 1636
BstAFI CTTAAG 1 cut(s) 193
BstAPI GCANNNNNTGC 1 cut(s) 1864
BstC8I GCNNGC 4 cut(s) 697, 924, 1057, 1671
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 4 cut(s) 395, 641, 758, 1225
BstKTI GATC 7 cut(s) 130, 200, 382, 745, 934, 1015, 1714
BstMAI GTCTC 5 cut(s) 160, 365, 596, 732, 1914
BstMBI GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
BstMWI GCNNNNNNNGC 5 cut(s) 645, 696, 1052, 1061, 1864
BstNI CCWGG 4 cut(s) 8, 1425, 1700, 1815
BstSCI CCNGG 4 cut(s) 6, 1423, 1698, 1813
BstSFI CTRYAG 3 cut(s) 945, 1479, 2036
BstV1I GCAGC 2 cut(s) 1033, 1350
BstV2I GAAGAC 1 cut(s) 98
BstX2I RGATCY 4 cut(s) 127, 197, 379, 1012
BstXI CCANNNNNNTGG 1 cut(s) 37
BstYI RGATCY 4 cut(s) 127, 197, 379, 1012
BstZ17I GTATAC 1 cut(s) 1657
Bsu15I ATCGAT 1 cut(s) 1279
Bsu36I CCTNAGG 1 cut(s) 1820
BsuI GTATCC 2 cut(s) 986, 1276
BsuRI GGCC 4 cut(s) 648, 1604, 1813, 1818
BsuTUI ATCGAT 1 cut(s) 1279
BtgI CCRYGG 1 cut(s) 30
BtsCI GGATG 4 cut(s) 395, 641, 758, 1225
BtsIMutI CAGTG 4 cut(s) 656, 975, 1244, 2005
BveI ACCTGC 1 cut(s) 2027
Cac8I GCNNGC 4 cut(s) 697, 924, 1057, 1671
CaiI CAGNNNCTG 1 cut(s) 1137
Cfr13I GGNCC 3 cut(s) 864, 1134, 1811
ClaI ATCGAT 1 cut(s) 1279
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 5 cut(s) 187, 1544, 1755, 1841, 2004
CviAII CATG 4 cut(s) 31, 692, 861, 1550
CviQI GTAC 5 cut(s) 187, 1544, 1755, 1841, 2004
DpnI GATC 7 cut(s) 129, 199, 381, 744, 933, 1014, 1713
DpnII GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
Eam1104I CTCTTC 1 cut(s) 1636
EarI CTCTTC 1 cut(s) 1636
Eco130I CCWWGG 1 cut(s) 30
Eco147I AGGCCT 1 cut(s) 1818
Eco32I GATATC 1 cut(s) 1579
Eco47I GGWCC 2 cut(s) 864, 1134
Eco57I CTGAAG 1 cut(s) 1649
Eco81I CCTNAGG 1 cut(s) 1820
Eco88I CYCGRG 2 cut(s) 473, 554
EcoO109I RGGNCCY 1 cut(s) 1134
EcoRI GAATTC 1 cut(s) 1434
EcoRII CCWGG 4 cut(s) 6, 1423, 1698, 1813
EcoRV GATATC 1 cut(s) 1579
EcoT14I CCWWGG 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 30
FaeI CATG 4 cut(s) 34, 695, 864, 1553
FaqI GGGAC 1 cut(s) 1720
FatI CATG 4 cut(s) 30, 691, 860, 1549
FauNDI CATATG 1 cut(s) 1918
FblI GTMKAC 2 cut(s) 1482, 1656
Fnu4HI GCNGC 2 cut(s) 1047, 1339
FokI GGATG 4 cut(s) 402, 648, 765, 1232
Fsp4HI GCNGC 2 cut(s) 1047, 1339
FspBI CTAG 4 cut(s) 876, 1392, 1649, 1868
GluI GCNGC 2 cut(s) 1047, 1339
HaeIII GGCC 4 cut(s) 648, 1604, 1813, 1818
HapII CCGG 1 cut(s) 979
HgaI GACGC 1 cut(s) 1052
Hin1II CATG 4 cut(s) 34, 695, 864, 1553
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HindIII AAGCTT 3 cut(s) 587, 1115, 1145
HpaII CCGG 1 cut(s) 979
HphI GGTGA 3 cut(s) 1706, 1837, 1961
Hpy166II GTNNAC 3 cut(s) 1042, 1483, 1657
Hpy188I TCNGA 6 cut(s) 26, 425, 931, 1095, 1711, 1848
Hpy8I GTNNAC 3 cut(s) 1042, 1483, 1657
HpyAV CCTTC 4 cut(s) 380, 882, 1822, 1949
HpyCH4III ACNGT 3 cut(s) 1480, 1559, 1775
HpyCH4IV ACGT 3 cut(s) 123, 829, 1843
HpyF10VI GCNNNNNNNGC 5 cut(s) 645, 696, 1052, 1061, 1864
HpySE526I ACGT 3 cut(s) 123, 829, 1843
Hsp92II CATG 4 cut(s) 34, 695, 864, 1553
KpnI GGTACC 1 cut(s) 190
Kzo9I GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
LmnI GCTCC 1 cut(s) 278
Lsp1109I GCAGC 2 cut(s) 1033, 1350
LweI GCATC 4 cut(s) 150, 626, 935, 1137
MaeI CTAG 4 cut(s) 876, 1392, 1649, 1868
MaeII ACGT 3 cut(s) 123, 829, 1843
MaeIII GTNAC 5 cut(s) 93, 119, 1025, 1343, 1396
MalI GATC 7 cut(s) 129, 199, 381, 744, 933, 1014, 1713
MboI GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
MboII GAAGA 5 cut(s) 98, 122, 1233, 1470, 1653
MfeI CAATTG 2 cut(s) 630, 1309
MflI RGATCY 4 cut(s) 127, 197, 379, 1012
MhlI GDGCHC 1 cut(s) 1557
MlyI GAGTC 3 cut(s) 162, 734, 1715
MmeI TCCRAC 1 cut(s) 403
MroXI GAANNNNTTC 2 cut(s) 1407, 1965
MslI CAYNNNNRTG 1 cut(s) 35
MspA1I CMGCKG 1 cut(s) 1341
MspCI CTTAAG 1 cut(s) 193
MspI CCGG 1 cut(s) 979
MspR9I CCNGG 4 cut(s) 8, 1425, 1700, 1815
MunI CAATTG 2 cut(s) 630, 1309
MvaI CCWGG 4 cut(s) 8, 1425, 1700, 1815
MwoI GCNNNNNNNGC 5 cut(s) 645, 696, 1052, 1061, 1864
NcoI CCATGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 1918
NdeII GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
NlaIII CATG 4 cut(s) 34, 695, 864, 1553
NlaIV GGNNCC 1 cut(s) 188
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 2 cut(s) 93, 1396
PaeR7I CTCGAG 1 cut(s) 473
PceI AGGCCT 1 cut(s) 1818
PdmI GAANNNNTTC 2 cut(s) 1407, 1965
PfeI GAWTC 7 cut(s) 451, 478, 503, 520, 550, 661, 1501
PfoI TCCNGGA 1 cut(s) 1423
PkrI GCNGC 2 cut(s) 1048, 1340
PleI GAGTC 3 cut(s) 162, 733, 1714
PpsI GAGTC 3 cut(s) 162, 733, 1714
PpuMI RGGWCCY 1 cut(s) 1134
PshBI ATTAAT 1 cut(s) 1158
Psp5II RGGWCCY 1 cut(s) 1134
Psp6I CCWGG 4 cut(s) 6, 1423, 1698, 1813
PspGI CCWGG 4 cut(s) 6, 1423, 1698, 1813
PspN4I GGNNCC 1 cut(s) 188
PspPI GGNCC 3 cut(s) 864, 1134, 1811
PspPPI RGGWCCY 1 cut(s) 1134
PstNI CAGNNNCTG 1 cut(s) 1137
PsuI RGATCY 4 cut(s) 127, 197, 379, 1012
PvuII CAGCTG 1 cut(s) 1341
RsaI GTAC 5 cut(s) 188, 1545, 1756, 1842, 2005
RsaNI GTAC 5 cut(s) 187, 1544, 1755, 1841, 2004
RseI CAYNNNNRTG 1 cut(s) 35
SatI GCNGC 2 cut(s) 1047, 1339
Sau3AI GATC 7 cut(s) 127, 197, 379, 742, 931, 1012, 1711
Sau96I GGNCC 3 cut(s) 864, 1134, 1811
SchI GAGTC 3 cut(s) 162, 734, 1715
ScrFI CCNGG 4 cut(s) 8, 1425, 1700, 1815
SduI GDGCHC 1 cut(s) 1557
SfaNI GCATC 4 cut(s) 150, 626, 935, 1137
SfcI CTRYAG 3 cut(s) 945, 1479, 2036
Sfr274I CTCGAG 1 cut(s) 473
SinI GGWCC 2 cut(s) 864, 1134
SlaI CTCGAG 1 cut(s) 473
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 5 cut(s) 163, 193, 368, 473, 1787
SmoI CTYRAG 5 cut(s) 163, 193, 368, 473, 1787
SseBI AGGCCT 1 cut(s) 1818
SspI AATATT 1 cut(s) 854
SspMI CTAG 4 cut(s) 876, 1392, 1649, 1868
StuI AGGCCT 1 cut(s) 1818
StyD4I CCNGG 4 cut(s) 6, 1423, 1698, 1813
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 3 cut(s) 1480, 1559, 1775
TaiI ACGT 3 cut(s) 126, 832, 1846
TaqI TCGA 3 cut(s) 474, 1279, 1456
TatI WGTACW 1 cut(s) 1543
TfiI GAWTC 7 cut(s) 451, 478, 503, 520, 550, 661, 1501
TscAI CASTG 4 cut(s) 663, 975, 1251, 2005
TseFI GTSAC 2 cut(s) 93, 1396
TseI GCWGC 2 cut(s) 1046, 1338
Tsp45I GTSAC 2 cut(s) 93, 1396
TspDTI ATGAA 6 cut(s) 295, 401, 587, 1294, 1439, 1461
TspGWI ACGGA 2 cut(s) 29, 1415
TspRI CASTG 4 cut(s) 663, 975, 1251, 2005
Vha464I CTTAAG 1 cut(s) 193
VpaK11BI GGWCC 2 cut(s) 864, 1134
VspI ATTAAT 1 cut(s) 1158
XapI RAATTY 4 cut(s) 88, 211, 286, 1434
XbaI TCTAGA 1 cut(s) 875
XhoI CTCGAG 1 cut(s) 473
XmiI GTMKAC 2 cut(s) 1482, 1656
XmnI GAANNNNTTC 2 cut(s) 1407, 1965
XspI CTAG 4 cut(s) 876, 1392, 1649, 1868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.