Rmu_sc0000504.1_g000023

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000504.1
OG0000105
Physical Location & Seq
Forward (+)
88343 .. 92563
4221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000504.1_g000023.1.cds

Sequence Viewer

Length: 3579 bp
atggcgtcaacctcttctggtcgtcaatggaaatacgatgtgtttctaagtttcagggggacagatacccgcaagggttttacgggtcgcctgtattctgcactaaatcagaaaggaattctcacctttatggatgataaagagcttgagaaaggaaaatccattaggcctgaacttttagctgcaattgaggagtctagatgtgcgattgtcgttctgtcaaagagatatacttcttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagagaggggccaacaagtcctccccgtcttcttagctgtggatccttctgatgtgcggcaccaaaggggaaggtttgagctcaaaagggaaccccaagtagaagtaagggaacatgaagaagtttatgtgaagaatgaggagagactaaatgcccagagagctgctttgacagaggtggccaatctttctggctgggataccaagaatactccaattgaagaagcacaaatagttgaggaaattgttaatcatatactaaagaagttcgtgtatacatcttcaagtgttgacaagggcttcataggaatggattcccgcattcatgatctattaagcaattacatatgtctgaagcttcgtggggtgcgttttatagggatccatggcatgcggggcataggtaagacaactgttgcccgagctatctatgatgaaatttgtcaggattttgaccgaacctgctttctttccaatgttagagaaatgtccaaaaacaatggcctagtttctctacaagaaaaacttctttccaaaatcctgatggcaaaaattgaaaatatagaggatgaatacgatggagctgctgtgatagaaaggcggttgtgtagaaaaaaggtgcttgttgttattgatgatgtggatcagttgaaacaattagagaaattggctggaagtcgcaactggtttggttcagggagtagaattatcataaccaccacagatgttcagttgttaaaggcacatgatgttgatgctacatacaaggcaaacgggttaaaccgtggtgaagcacttcaacttttgagtttgaaggcttttaagaaatgtgccccaccagaaaattatttggatctgtgcgatgatattttaggctatgctcagggccttccgttggctctcgtggttttaggttcttttctatttggcagaagcactgatgaatgggcaagtgcaatagaaaggctaaagaacacaccagataaacgcattattgaggtgcttcggattagttttgatggactggatgagaaagacaaagaaatattcctacatattgcttgcttttacaaggggaaggataaggatcgtgtgacacagatactagactattgcaagctaaactctgtcattggtttaagtgttcttactgatagatgtctcatcactatctccaacaacgaactgtcgatgcatgatttgctacaagaaatgggctgggaaattgttcgtgaacagtctcctacagacccaggcaaacgtagtagattatggtctcatgaagacatcaacaacgtgctgaagaaaaatacgggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggttcattggaagccagaagccttttcaaatttgtctcaacttagtcttctccatattcgtaatgtggaccttaccaaaggcctcacttgtcttcctaattccttgagactcctcgaatggactgggtatcccttaagatctctcccaaaaaattttgaagcagatgaacttattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaattttgacaagttgaagttcatcaaactctgccattctcaaaacattgaggagaccccagacctcgcaggtgttcagaatcttgagactttagatcttgaaggatgtgagaatttgggaagaatccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaggtctgaagagtttgccgagtagaattgaaatggaatctcttgaaacatttattctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgtcggtgctttgtcttgatgagactgccattgaggaactgcctgtttcaattgaacggctaagtggccttgtgtcattgaatctaggcaactgcagaaatcttgttcgtctcccaagcaccatcaataaattgaagtctgttgaaaatcttaatctttctggatgcttgaaactcggtaaacaacaggtaaatgtggacgagatggactgttttgaggaaactgatgtgaatagtgggtctgcaatagaaatgtcagatacgcatggtatcatcaaatatttgagacgttcaatctttcatgtatgtgaagtcgttcggggatctataaatacgttcttgccttctggattggtgcaaaaagtgaatacagagccaatgagtttccgcttgcctatatctggtctgtgtaatctaacatatctgaacctgagtaattccaatcttggtgaaggagcatttcccaatgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgctcgccttccttcaggcattggattgctttctaagcttgagaacttgaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtatactagatttaagggcagatggttgtacttcactgaaacacttgtttgatgcatcaaatttgaagggattaaacaaatcatatttcaatttcatcgattgtttcaatctaaatggcaatcaaggatgcaataacatagcatttgaaatgctgaagacattcatgtatcagggaatctctaataacagggaaacttttcatattgtaattcctgggagtaatattcctgagtggttcagccatcggagtgttgggcgttccttaactgtatatctacctgaagaatggaataacaagcgatttttgggatttgctttgtgtgctgtttttgtactccgtaagcaccatcgggataagctttctagagaggaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagctcaatggaacaaaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttaagtcagatcacatgtggctattctatgtatcacatgataaatactttggtacagagttgtggcataacagttgcagtctggttgagttcttttttgaaaccagagggctgggtctgaaggtgaaggagtgtggagtccgtctgatatatgagcaagatgtgcaagagttgaaccgaacaaccactcaatcaagcagtaggatgtctccttatcaggatatattgattgattctgacattccggttggaggggaaaccagtggcactggtagcagaacttgcacacttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1192

Amino Acids

135.19

Weight (kDa)

6.72

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1931
Acc36I ACCTGC 2 cut(s) 752, 1931
AccB1I GGYRCC 1 cut(s) 342
AccB7I CCANNNNNTGG 1 cut(s) 1618
AccI GTMKAC 2 cut(s) 557, 2791
AciI CCGC 6 cut(s) 70, 340, 601, 676, 883, 2554
AclI AACGTT 1 cut(s) 2164
AclWI GGATC 8 cut(s) 320, 333, 658, 671, 933, 1143, 1377, 2497
AcoI YGGCCR 1 cut(s) 462
AcuI CTGAAG 8 cut(s) 656, 1604, 2081, 2685, 2963, 3090, 3224, 3416
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 3 cut(s) 2818, 3123, 3331
AfiI CCNNNNNNNGG 4 cut(s) 1177, 1618, 2567, 3527
AflII CTTAAG 1 cut(s) 1780
AflIII ACRYGT 1 cut(s) 3291
AjnI CCWGG 3 cut(s) 1534, 3001, 3273
AjuI GAANNNNNNNTTGG 2 cut(s) 2723, 2755
Alw21I GWGCWC 1 cut(s) 366
AlwI GGATC 8 cut(s) 320, 333, 658, 671, 933, 1143, 1377, 2497
Ama87I CYCGRG 2 cut(s) 702, 2141
AoxI GGCC 7 cut(s) 167, 292, 462, 784, 1168, 1726, 2233
ApeKI GCWGC 3 cut(s) 182, 446, 866
Asp700I GAANNNNTTC 8 cut(s) 595, 807, 1077, 1509, 1603, 2481, 2948, 2985
AspS9I GGNCC 3 cut(s) 292, 1168, 1714
AsuHPI GGTGA 5 cut(s) 115, 1082, 2627, 2671, 3412
AvaI CYCGRG 2 cut(s) 702, 2141
AvaII GGWCC 1 cut(s) 1714
BaeGI GKGCMC 1 cut(s) 1117
BalI TGGCCA 1 cut(s) 464
BamHI GGATCC 2 cut(s) 325, 663
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 366
BauI CACGAG 1 cut(s) 1184
BbsI GAAGAC 5 cut(s) 304, 1572, 1685, 1730, 2951
Bbv12I GWGCWC 1 cut(s) 366
BbvI GCAGC 3 cut(s) 169, 433, 853
BceAI ACGGC 1 cut(s) 2240
BcgI CGANNNNNNTGC 2 cut(s) 848, 882
BciT130I CCWGG 3 cut(s) 1536, 3003, 3275
BciVI GTATCC 2 cut(s) 475, 1785
BfaI CTAG 6 cut(s) 198, 788, 1388, 2252, 2795, 3153
BfmI CTRYAG 2 cut(s) 1527, 2260
BfrI CTTAAG 1 cut(s) 1780
BfuAI ACCTGC 2 cut(s) 752, 1931
BfuI GTATCC 2 cut(s) 475, 1785
BglII AGATCT 2 cut(s) 1784, 1966
BisI GCNGC 4 cut(s) 183, 341, 447, 867
BlsI GCNGC 4 cut(s) 184, 342, 448, 868
Bme1390I CCNGG 3 cut(s) 1536, 3003, 3275
Bme18I GGWCC 1 cut(s) 1714
BmeT110I CYCGRG 2 cut(s) 702, 2141
BmgT120I GGNCC 3 cut(s) 292, 1168, 1714
BmiI GGNNCC 5 cut(s) 293, 327, 344, 375, 665
BmrFI CCNGG 3 cut(s) 1536, 3003, 3275
BmrI ACTGGG 1 cut(s) 1779
BmsI GCATC 6 cut(s) 1027, 1464, 2321, 2830, 2852, 2906
BmuI ACTGGG 1 cut(s) 1779
BpiI GAAGAC 5 cut(s) 304, 1572, 1685, 1730, 2951
Bpu10I CCTNAGC 1 cut(s) 1164
BpuEI CTTGAG 4 cut(s) 167, 1771, 1976, 2747
Bsa29I ATCGAT 1 cut(s) 2886
BsaBI GATNNNNATC 2 cut(s) 924, 1368
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1563, 1919
BsaJI CCNNGG 6 cut(s) 667, 1066, 1534, 1612, 2008, 3002
BsaWI WCCGGW 1 cut(s) 3520
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 855, 885
Bsc4I CCNNNNNNNGG 4 cut(s) 1177, 1618, 2567, 3527
Bse1I ACTGG 5 cut(s) 971, 1311, 1774, 3537, 3550
Bse8I GATNNNNATC 2 cut(s) 924, 1368
BseBI CCWGG 3 cut(s) 1536, 3003, 3275
BseCI ATCGAT 1 cut(s) 2886
BseDI CCNNGG 6 cut(s) 667, 1066, 1534, 1612, 2008, 3002
BseGI GGATG 8 cut(s) 139, 259, 856, 1315, 1982, 2336, 2921, 3486
BseJI GATNNNNATC 2 cut(s) 924, 1368
BseLI CCNNNNNNNGG 4 cut(s) 1177, 1618, 2567, 3527
BseMII CTCAG 3 cut(s) 1178, 2588, 3009
BseNI ACTGG 5 cut(s) 971, 1311, 1774, 3537, 3550
BseRI GAGGAG 4 cut(s) 206, 437, 1748, 1937
BseSI GKGCMC 1 cut(s) 1117
BseXI GCAGC 3 cut(s) 169, 433, 853
BseYI CCCAGC 3 cut(s) 477, 1500, 3388
BsgI GTGCAG 1 cut(s) 84
BshFI GGCC 7 cut(s) 169, 294, 464, 786, 1170, 1728, 2235
BshNI GGYRCC 1 cut(s) 342
BshVI ATCGAT 1 cut(s) 2886
BsiHKAI GWGCWC 1 cut(s) 366
BsiHKCI CYCGRG 2 cut(s) 702, 2141
BsiSI CCGG 1 cut(s) 3521
BslFI GGGAC 1 cut(s) 73
BslI CCNNNNNNNGG 4 cut(s) 1177, 1618, 2567, 3527
BsmBI CGTCTC 2 cut(s) 2282, 2446
BsmFI GGGAC 1 cut(s) 73
BsmI GAATGC 1 cut(s) 603
BsnI GGCC 7 cut(s) 169, 294, 464, 786, 1170, 1728, 2235
Bso31I GGTCTC 2 cut(s) 1563, 1919
BsoBI CYCGRG 2 cut(s) 702, 2141
Bsp1286I GDGCHC 2 cut(s) 366, 1117
Bsp19I CCATGG 1 cut(s) 667
BspACI CCGC 6 cut(s) 70, 340, 601, 676, 883, 2554
BspANI GGCC 7 cut(s) 169, 294, 464, 786, 1170, 1728, 2235
BspCNI CTCAG 3 cut(s) 1177, 2589, 3010
BspDI ATCGAT 1 cut(s) 2886
BspHI TCATGA 2 cut(s) 607, 1561
BspLI GGNNCC 5 cut(s) 293, 327, 344, 375, 665
BspMAI CTGCAG 1 cut(s) 2264
BspMI ACCTGC 2 cut(s) 752, 1931
BspPI GGATC 8 cut(s) 320, 333, 658, 671, 933, 1143, 1377, 2497
BspT107I GGYRCC 1 cut(s) 342
BspTI CTTAAG 1 cut(s) 1780
BspTNI GGTCTC 2 cut(s) 1563, 1919
BsrI ACTGG 5 cut(s) 971, 1311, 1774, 3537, 3550
BssECI CCNNGG 6 cut(s) 667, 1066, 1534, 1612, 2008, 3002
BssNAI GTATAC 2 cut(s) 558, 2792
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1184
BssT1I CCWWGG 3 cut(s) 667, 1612, 2008
Bst1107I GTATAC 2 cut(s) 558, 2792
Bst2BI CACGAG 1 cut(s) 1184
Bst2UI CCWGG 3 cut(s) 1536, 3003, 3275
Bst4CI ACNGT 7 cut(s) 697, 1067, 1470, 1521, 2378, 3058, 3350
Bst6I CTCTTC 2 cut(s) 19, 2057
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1780
BstAPI GCANNNNNTGC 3 cut(s) 1483, 3439, 3558
BstC8I GCNNGC 6 cut(s) 674, 1345, 1400, 2558, 2692, 3246
BstDEI CTNAG 9 cut(s) 47, 316, 1164, 1688, 2228, 2597, 2672, 2721, 3018
BstDSI CCRYGG 2 cut(s) 667, 1066
BstEII GGTNACC 1 cut(s) 2659
BstF5I GGATG 8 cut(s) 139, 259, 856, 1315, 1982, 2336, 2921, 3486
BstMWI GCNNNNNNNGC 8 cut(s) 443, 678, 1483, 2722, 3110, 3439, 3549, 3558
BstNI CCWGG 3 cut(s) 1536, 3003, 3275
BstNSI RCATGY 2 cut(s) 676, 3295
BstPI GGTNACC 1 cut(s) 2659
BstSCI CCNGG 3 cut(s) 1534, 3001, 3273
BstSFI CTRYAG 2 cut(s) 1527, 2260
BstSLI GKGCMC 1 cut(s) 1117
BstV1I GCAGC 3 cut(s) 169, 433, 853
BstV2I GAAGAC 5 cut(s) 304, 1572, 1685, 1730, 2951
BstX2I RGATCY 6 cut(s) 325, 663, 1135, 1784, 1966, 2489
BstXI CCANNNNNNTGG 1 cut(s) 3388
BstYI RGATCY 6 cut(s) 325, 663, 1135, 1784, 1966, 2489
BstZ17I GTATAC 2 cut(s) 558, 2792
Bsu15I ATCGAT 1 cut(s) 2886
BsuI GTATCC 2 cut(s) 475, 1785
BsuRI GGCC 7 cut(s) 169, 294, 464, 786, 1170, 1728, 2235
BsuTUI ATCGAT 1 cut(s) 2886
BtgI CCRYGG 2 cut(s) 667, 1066
BtgZI GCGATG 1 cut(s) 1158
BtsCI GGATG 8 cut(s) 139, 259, 856, 1315, 1982, 2336, 2921, 3486
BtsIMutI CAGTG 4 cut(s) 1218, 2822, 3543, 3544
BveI ACCTGC 2 cut(s) 752, 1931
Cac8I GCNNGC 6 cut(s) 674, 1345, 1400, 2558, 2692, 3246
CciI TCATGA 2 cut(s) 607, 1561
Cfr13I GGNCC 3 cut(s) 292, 1168, 1714
ClaI ATCGAT 1 cut(s) 2886
Csp6I GTAC 3 cut(s) 2817, 3122, 3330
CviQI GTAC 3 cut(s) 2817, 3122, 3330
DdeI CTNAG 9 cut(s) 47, 316, 1164, 1688, 2228, 2597, 2672, 2721, 3018
EaeI YGGCCR 1 cut(s) 462
Eam1104I CTCTTC 2 cut(s) 19, 2057
EarI CTCTTC 2 cut(s) 19, 2057
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 3 cut(s) 667, 1612, 2008
Eco147I AGGCCT 2 cut(s) 169, 1728
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 2 cut(s) 1563, 1919
Eco47I GGWCC 1 cut(s) 1714
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 8 cut(s) 656, 1604, 2081, 2685, 2963, 3090, 3224, 3416
Eco88I CYCGRG 2 cut(s) 702, 2141
Eco91I GGTNACC 1 cut(s) 2659
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 1 cut(s) 1168
EcoO65I GGTNACC 1 cut(s) 2659
EcoRI GAATTC 2 cut(s) 117, 3161
EcoRII CCWGG 3 cut(s) 1534, 3001, 3273
EcoT14I CCWWGG 3 cut(s) 667, 1612, 2008
EcoT22I ATGCAT 3 cut(s) 281, 1479, 2845
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 3 cut(s) 667, 1612, 2008
Esp3I CGTCTC 2 cut(s) 2282, 2446
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 1 cut(s) 73
FauI CCCGC 3 cut(s) 77, 608, 669
FauNDI CATATG 1 cut(s) 629
FblI GTMKAC 2 cut(s) 557, 2791
Fnu4HI GCNGC 4 cut(s) 183, 341, 447, 867
FokI GGATG 8 cut(s) 146, 266, 863, 1322, 1989, 2343, 2928, 3493
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 4 cut(s) 183, 341, 447, 867
FspBI CTAG 6 cut(s) 198, 788, 1388, 2252, 2795, 3153
GluI GCNGC 4 cut(s) 183, 341, 447, 867
GsaI CCCAGC 3 cut(s) 481, 1504, 3392
HaeIII GGCC 7 cut(s) 169, 294, 464, 786, 1170, 1728, 2235
HapII CCGG 1 cut(s) 3521
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 3 cut(s) 9, 574, 1632
HindII GTYRAC 3 cut(s) 9, 574, 1632
HindIII AAGCTT 4 cut(s) 638, 2024, 2723, 3146
HpaII CCGG 1 cut(s) 3521
HphI GGTGA 5 cut(s) 115, 1082, 2627, 2671, 3412
Hpy166II GTNNAC 9 cut(s) 9, 558, 574, 1517, 1632, 1714, 2348, 2365, 2792
Hpy8I GTNNAC 9 cut(s) 9, 558, 574, 1517, 1632, 1714, 2348, 2365, 2792
HpyCH4III ACNGT 7 cut(s) 697, 1067, 1470, 1521, 2378, 3058, 3350
HpyCH4IV ACGT 5 cut(s) 1543, 1578, 2164, 2455, 2501
HpyF10VI GCNNNNNNNGC 8 cut(s) 443, 678, 1483, 2722, 3110, 3439, 3549, 3558
HpyF3I CTNAG 9 cut(s) 47, 316, 1164, 1688, 2228, 2597, 2672, 2721, 3018
HpySE526I ACGT 5 cut(s) 1543, 1578, 2164, 2455, 2501
Hsp92I GRCGYC 1 cut(s) 5
LmnI GCTCC 2 cut(s) 863, 2621
Lsp1109I GCAGC 3 cut(s) 169, 433, 853
LweI GCATC 6 cut(s) 1027, 1464, 2321, 2830, 2852, 2906
MaeI CTAG 6 cut(s) 198, 788, 1388, 2252, 2795, 3153
MaeII ACGT 5 cut(s) 1543, 1578, 2164, 2455, 2501
MaeIII GTNAC 3 cut(s) 1375, 2642, 2659
MfeI CAATTG 3 cut(s) 186, 498, 2217
MflI RGATCY 6 cut(s) 325, 663, 1135, 1784, 1966, 2489
MhlI GDGCHC 2 cut(s) 366, 1117
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 3 cut(s) 203, 1749, 3423
MmeI TCCRAC 3 cut(s) 1482, 2131, 3505
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 3 cut(s) 281, 1479, 2845
MroXI GAANNNNTTC 8 cut(s) 595, 807, 1077, 1509, 1603, 2481, 2948, 2985
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 5 cut(s) 128, 590, 1622, 2472, 3036
Msp20I TGGCCA 1 cut(s) 464
MspCI CTTAAG 1 cut(s) 1780
MspI CCGG 1 cut(s) 3521
MspR9I CCNGG 3 cut(s) 1536, 3003, 3275
MunI CAATTG 3 cut(s) 186, 498, 2217
Mva1269I GAATGC 1 cut(s) 603
MvaI CCWGG 3 cut(s) 1536, 3003, 3275
MwoI GCNNNNNNNGC 8 cut(s) 443, 678, 1483, 2722, 3110, 3439, 3549, 3558
NcoI CCATGG 1 cut(s) 667
NdeI CATATG 1 cut(s) 629
NlaIV GGNNCC 5 cut(s) 293, 327, 344, 375, 665
NmeAIII GCCGAG 1 cut(s) 2097
NmuCI GTSAC 2 cut(s) 1375, 2659
NsiI ATGCAT 3 cut(s) 281, 1479, 2845
NspI RCATGY 2 cut(s) 676, 3295
PaeI GCATGC 1 cut(s) 676
PagI TCATGA 2 cut(s) 607, 1561
PaqCI CACCTGC 1 cut(s) 1931
PceI AGGCCT 2 cut(s) 169, 1728
PciI ACATGT 1 cut(s) 3291
PcsI WCGNNNNNNNCGW 1 cut(s) 649
PctI GAATGC 1 cut(s) 603
PdmI GAANNNNTTC 8 cut(s) 595, 807, 1077, 1509, 1603, 2481, 2948, 2985
PflMI CCANNNNNTGG 1 cut(s) 1618
PkrI GCNGC 4 cut(s) 184, 342, 448, 868
PleI GAGTC 3 cut(s) 202, 1749, 3422
PpsI GAGTC 3 cut(s) 202, 1749, 3422
PscI ACATGT 1 cut(s) 3291
Psp124BI GAGCTC 1 cut(s) 366
Psp1406I AACGTT 1 cut(s) 2164
Psp6I CCWGG 3 cut(s) 1534, 3001, 3273
PspEI GGTNACC 1 cut(s) 2659
PspFI CCCAGC 3 cut(s) 477, 1500, 3388
PspGI CCWGG 3 cut(s) 1534, 3001, 3273
PspN4I GGNNCC 5 cut(s) 293, 327, 344, 375, 665
PspPI GGNCC 3 cut(s) 292, 1168, 1714
PstI CTGCAG 1 cut(s) 2264
PsuI RGATCY 6 cut(s) 325, 663, 1135, 1784, 1966, 2489
RsaI GTAC 3 cut(s) 2818, 3123, 3331
RsaNI GTAC 3 cut(s) 2817, 3122, 3330
RseI CAYNNNNRTG 5 cut(s) 128, 590, 1622, 2472, 3036
SacI GAGCTC 1 cut(s) 366
SatI GCNGC 4 cut(s) 183, 341, 447, 867
Sau96I GGNCC 3 cut(s) 292, 1168, 1714
SchI GAGTC 3 cut(s) 203, 1749, 3423
ScrFI CCNGG 3 cut(s) 1536, 3003, 3275
SduI GDGCHC 2 cut(s) 366, 1117
SfaNI GCATC 6 cut(s) 1027, 1464, 2321, 2830, 2852, 2906
SfcI CTRYAG 2 cut(s) 1527, 2260
SinI GGWCC 1 cut(s) 1714
SmiMI CAYNNNNRTG 5 cut(s) 128, 590, 1622, 2472, 3036
SmlI CTYRAG 5 cut(s) 146, 1750, 1780, 1955, 2726
SmoI CTYRAG 5 cut(s) 146, 1750, 1780, 1955, 2726
SphI GCATGC 1 cut(s) 676
SseBI AGGCCT 2 cut(s) 169, 1728
SsiI CCGC 6 cut(s) 70, 340, 601, 676, 883, 2554
SspI AATATT 3 cut(s) 1329, 2447, 3013
SspMI CTAG 6 cut(s) 198, 788, 1388, 2252, 2795, 3153
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 2 cut(s) 169, 1728
StyD4I CCNGG 3 cut(s) 1534, 3001, 3273
StyI CCWWGG 3 cut(s) 667, 1612, 2008
TaaI ACNGT 7 cut(s) 697, 1067, 1470, 1521, 2378, 3058, 3350
TaiI ACGT 5 cut(s) 1546, 1581, 2167, 2458, 2504
TaqI TCGA 3 cut(s) 1472, 1761, 2886
TaqII GACCGA 1 cut(s) 753
TatI WGTACW 2 cut(s) 2816, 3121
TauI GCSGC 1 cut(s) 343
TscAI CASTG 4 cut(s) 1225, 2829, 3544, 3550
TseFI GTSAC 2 cut(s) 1375, 2659
TseI GCWGC 3 cut(s) 182, 446, 866
Tsp45I GTSAC 2 cut(s) 1375, 2659
TspGWI ACGGA 3 cut(s) 1164, 3116, 3407
TspRI CASTG 4 cut(s) 1225, 2829, 3544, 3550
Van91I CCANNNNNTGG 1 cut(s) 1618
Vha464I CTTAAG 1 cut(s) 1780
VpaK11BI GGWCC 1 cut(s) 1714
XbaI TCTAGA 2 cut(s) 197, 3152
XceI RCATGY 2 cut(s) 676, 3295
XcmI CCANNNNNNNNNTGG 3 cut(s) 823, 2006, 3038
XmiI GTMKAC 2 cut(s) 557, 2791
XmnI GAANNNNTTC 8 cut(s) 595, 807, 1077, 1509, 1603, 2481, 2948, 2985
XspI CTAG 6 cut(s) 198, 788, 1388, 2252, 2795, 3153
Zsp2I ATGCAT 3 cut(s) 281, 1479, 2845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.