RchiOBHm_Chr1g0322521

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000105
Physical Location & Seq
Reverse (-)
9880976 .. 9882650
1675 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55251

Sequence Viewer

Length: 1542 bp
ATGGAATCTCTTGAAACATTAATTCTTTCTAACTGCTCAAAAGTTAAGAAGATTCCTGAGTTTGTTGGAAATATGGAACGTTTGTTGGTGCTTTGTCTCGATGAGACTGCCATTGAGGAACTGCCTGTTTCAATTGAACGGTTGACTGGCCTTGTGTCATTGAATCTAAGCAACTGCAGAAAACTTGTTTTTCTTCCAAGCACCATCAATAAATTGAAGTCTGTTGAAAATCTTAATCTTTCTGGATGCTTGAAACTCGGCAAACATCAGGTAAATCTGGGGGAGATGGACTGTTTTGAGGAAACTGATGTGAATAGTGGGTCTGCAATAGAAATGTCACCTACCCATGATCGCATAAAACATGTGAGAGGTTCAATCTTTCATCAATGCAAAGTAGTTTGGGGATCTTTAAATAAGTTTTTGCCTTCTGGATTGGTGCAAGAAGTGAATACAGAGCCAATGAGTTTCCGCTTGGCTATATCTCAAAAAGTGAATGCAGAGCCAACGAGTGTCCGCTTGCCTATTTCTGGTCTCTGTAATTTAACATATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAACGAATTCGGTTACTTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTTATTCGCATTCCTTCAGGCGTTCGATTGCTTTCTAAGCTTGAGAACTTTAACTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCAGACCTTCCATCAAATAGTAGACTAGATTTAAGGGCAGATGGTTGTACTTCACTGAAATACTTGTTTGATGCATCAAATTTGAACAGACTAAATAGATCATATTTCAATTTCATCAATTGCTTCAATCTAAATGGCAATGAAGGATGCAATAACATAGCATTTGAAATGCTGAGGACACTCATGTATCAGGGAATCTCTAATAAGAGGGAAACTTTTCAAATTGTAATTCCTGGAAGTAATATTCCTGAGTGGTTCAGCCATCAGAGCGTTGGGTGTTCATTAAGTGTATCTCTACCTGTACATTGGAATAACAGTCGGTTTTTGGGATTTGCTTTGTGTGCTGTTTTTGTACTCCATGAGCACCATCCGGTGGATGAGCTTTATATAGATGAATTCAGGACTTTTAATGCAACACATCATCTTGTATGTTGCCTGAAGCTCAATGGAAGAGAATTGGAAGTATATGGCAGACAGCCTGCATTTCGCTTTAGTGAAGAATTTTGCCAGGTTAAATCAGATCACCTGTGGCTATTCTATGTATCTCGTGATAAATACTTTGGTACAGAGTGGTGGCATAACAGTTGCAGTCAGTTTGAGTTCTTATTTGAAACTAGAGGGCCAGGTCTGAAGGTGAAGGAGTGTGGAGTCCGTCTGATATATGACCAAGATGTGCAAGAGTTGAACAAAACAACCCCTCAATCAAGTAGTGGGATGTCTCCTTATGAGGATATATCGATTAGTTTTCACATTCCAGTTGCAGGGGAAACCAGTGGCAGTGGTAGCAGAACTTGCACACTTGAAGAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

513

Amino Acids

57.97

Weight (kDa)

5.91

Isoelectric Point (pI)

41.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 2 - 87 7.7e-13 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 9 - 83 7.3e-10 Leucine-rich repeat region
C-JID PF20160 320 - 469 6.2e-21 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1540
AccB7I CCANNNNNTGG 1 cut(s) 1102
AccI GTMKAC 1 cut(s) 751
AciI CCGC 2 cut(s) 469, 514
AclI AACGTT 1 cut(s) 79
AclWI GGATC 1 cut(s) 412
AcsI RAATTY 4 cut(s) 596, 808, 1124, 1229
AcuI CTGAAG 3 cut(s) 645, 1187, 1379
AfaI GTAC 4 cut(s) 778, 1032, 1083, 1294
AfiI CCNNNNNNNGG 3 cut(s) 527, 1102, 1490
AflIII ACRYGT 1 cut(s) 361
AjnI CCWGG 3 cut(s) 961, 1236, 1351
AjuI GAANNNNNNNTTGG 2 cut(s) 683, 715
AluBI AGCT 3 cut(s) 685, 1111, 1171
AluI AGCT 3 cut(s) 685, 1111, 1171
Alw21I GWGCWC 1 cut(s) 1095
Alw26I GTCTC 5 cut(s) 98, 101, 536, 709, 1452
AlwI GGATC 1 cut(s) 412
AoxI GGCC 2 cut(s) 148, 1349
ApoI RAATTY 4 cut(s) 596, 808, 1124, 1229
AseI ATTAAT 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 945
AspS9I GGNCC 1 cut(s) 1349
AsuHPI GGTGA 5 cut(s) 330, 587, 631, 1244, 1375
BaeI ACNNNNGTAYC 2 cut(s) 899, 932
BauI CACGAG 1 cut(s) 1275
Bbv12I GWGCWC 1 cut(s) 1095
BbvCI CCTCAGC 1 cut(s) 902
BccI CCATC 6 cut(s) 212, 280, 748, 764, 999, 1104
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 3 cut(s) 963, 1238, 1353
BcoDI GTCTC 5 cut(s) 98, 101, 536, 709, 1452
BfaI CTAG 2 cut(s) 755, 1344
BfmI CTRYAG 1 cut(s) 175
Bme1390I CCNGG 3 cut(s) 963, 1238, 1353
BmgT120I GGNCC 1 cut(s) 1349
BmrFI CCNGG 3 cut(s) 963, 1238, 1353
BmsI GCATC 4 cut(s) 236, 790, 812, 866
Bpu10I CCTNAGC 1 cut(s) 902
BpuEI CTTGAG 1 cut(s) 707
Bsa29I ATCGAT 1 cut(s) 1466
BsaI GGTCTC 1 cut(s) 536
BsaWI WCCGGW 1 cut(s) 1099
Bsc4I CCNNNNNNNGG 3 cut(s) 527, 1102, 1490
Bse1I ACTGG 3 cut(s) 151, 1484, 1500
Bse3DI GCAATG 1 cut(s) 874
BseBI CCWGG 3 cut(s) 963, 1238, 1353
BseCI ATCGAT 1 cut(s) 1466
BseGI GGATG 5 cut(s) 251, 881, 1096, 1111, 1449
BseLI CCNNNNNNNGG 3 cut(s) 527, 1102, 1490
BseMI GCAATG 1 cut(s) 874
BseMII CTCAG 4 cut(s) 48, 548, 893, 969
BseNI ACTGG 3 cut(s) 151, 1484, 1500
BshFI GGCC 2 cut(s) 150, 1351
BshVI ATCGAT 1 cut(s) 1466
BsiHKAI GWGCWC 1 cut(s) 1095
BsiSI CCGG 1 cut(s) 1100
BslI CCNNNNNNNGG 3 cut(s) 527, 1102, 1490
BsmAI GTCTC 5 cut(s) 98, 101, 536, 709, 1452
BsmI GAATGC 2 cut(s) 499, 654
BsnI GGCC 2 cut(s) 150, 1351
Bso31I GGTCTC 1 cut(s) 536
Bsp1286I GDGCHC 1 cut(s) 1095
Bsp1407I TGTACA 1 cut(s) 1030
Bsp143I GATC 4 cut(s) 349, 404, 827, 1249
BspACI CCGC 2 cut(s) 469, 514
BspANI GGCC 2 cut(s) 150, 1351
BspCNI CTCAG 4 cut(s) 49, 549, 894, 970
BspDI ATCGAT 1 cut(s) 1466
BspMAI CTGCAG 1 cut(s) 179
BspPI GGATC 1 cut(s) 412
BspTNI GGTCTC 1 cut(s) 536
BsrDI GCAATG 1 cut(s) 874
BsrGI TGTACA 1 cut(s) 1030
BsrI ACTGG 3 cut(s) 151, 1484, 1500
BssMI GATC 4 cut(s) 349, 404, 827, 1249
BssSI CACGAG 1 cut(s) 1275
Bst2BI CACGAG 1 cut(s) 1275
Bst2UI CCWGG 3 cut(s) 963, 1238, 1353
Bst4CI ACNGT 4 cut(s) 141, 293, 1046, 1313
Bst6I CTCTTC 1 cut(s) 1174
BstAPI GCANNNNNTGC 1 cut(s) 1521
BstAUI TGTACA 1 cut(s) 1030
BstC8I GCNNGC 2 cut(s) 518, 1209
BstDEI CTNAG 7 cut(s) 57, 167, 557, 632, 681, 902, 978
BstEII GGTNACC 1 cut(s) 619
BstF5I GGATG 5 cut(s) 251, 881, 1096, 1111, 1449
BstKTI GATC 4 cut(s) 352, 407, 830, 1252
BstMAI GTCTC 5 cut(s) 98, 101, 536, 709, 1452
BstMBI GATC 4 cut(s) 349, 404, 827, 1249
BstMWI GCNNNNNNNGC 5 cut(s) 682, 996, 1070, 1512, 1521
BstNI CCWGG 3 cut(s) 963, 1238, 1353
BstNSI RCATGY 1 cut(s) 365
BstPI GGTNACC 1 cut(s) 619
BstSCI CCNGG 3 cut(s) 961, 1236, 1351
BstSFI CTRYAG 1 cut(s) 175
BstX2I RGATCY 1 cut(s) 404
BstYI RGATCY 1 cut(s) 404
Bsu15I ATCGAT 1 cut(s) 1466
BsuRI GGCC 2 cut(s) 150, 1351
BsuTUI ATCGAT 1 cut(s) 1466
BtsCI GGATG 5 cut(s) 251, 881, 1096, 1111, 1449
BtsI GCAGTG 1 cut(s) 1513
BtsIMutI CAGTG 3 cut(s) 782, 1507, 1513
Cac8I GCNNGC 2 cut(s) 518, 1209
Cfr13I GGNCC 1 cut(s) 1349
ClaI ATCGAT 1 cut(s) 1466
Csp6I GTAC 4 cut(s) 777, 1031, 1082, 1293
CviAII CATG 4 cut(s) 347, 362, 913, 1088
CviQI GTAC 4 cut(s) 777, 1031, 1082, 1293
DdeI CTNAG 7 cut(s) 57, 167, 557, 632, 681, 902, 978
DpnI GATC 4 cut(s) 351, 406, 829, 1251
DpnII GATC 4 cut(s) 349, 404, 827, 1249
DraI TTTAAA 1 cut(s) 411
Eam1104I CTCTTC 1 cut(s) 1174
EarI CTCTTC 1 cut(s) 1174
Eco31I GGTCTC 1 cut(s) 536
Eco57I CTGAAG 3 cut(s) 645, 1187, 1379
Eco91I GGTNACC 1 cut(s) 619
EcoO65I GGTNACC 1 cut(s) 619
EcoRI GAATTC 2 cut(s) 596, 1124
EcoRII CCWGG 3 cut(s) 961, 1236, 1351
EcoT22I ATGCAT 1 cut(s) 805
FaeI CATG 4 cut(s) 350, 365, 916, 1091
FatI CATG 4 cut(s) 346, 361, 912, 1087
FblI GTMKAC 1 cut(s) 751
FokI GGATG 5 cut(s) 258, 888, 1083, 1118, 1456
FspBI CTAG 2 cut(s) 755, 1344
HaeIII GGCC 2 cut(s) 150, 1351
HapII CCGG 1 cut(s) 1100
Hin1II CATG 4 cut(s) 350, 365, 916, 1091
HincII GTYRAC 1 cut(s) 144
HindII GTYRAC 1 cut(s) 144
HindIII AAGCTT 1 cut(s) 683
HinfI GANTC 6 cut(s) 5, 52, 163, 628, 924, 1377
HpaII CCGG 1 cut(s) 1100
HphI GGTGA 5 cut(s) 330, 587, 631, 1244, 1375
Hpy166II GTNNAC 2 cut(s) 144, 752
Hpy188I TCNGA 6 cut(s) 552, 733, 996, 1249, 1359, 1386
Hpy188III TCNNGA 9 cut(s) 11, 56, 98, 243, 429, 722, 977, 1129, 1277
Hpy8I GTNNAC 2 cut(s) 144, 752
HpyAV CCTTC 7 cut(s) 435, 572, 669, 746, 866, 1354, 1360
HpyCH4III ACNGT 4 cut(s) 141, 293, 1046, 1313
HpyCH4IV ACGT 1 cut(s) 79
HpyF10VI GCNNNNNNNGC 5 cut(s) 682, 996, 1070, 1512, 1521
HpyF3I CTNAG 7 cut(s) 57, 167, 557, 632, 681, 902, 978
HpySE526I ACGT 1 cut(s) 79
Hsp92II CATG 4 cut(s) 350, 365, 916, 1091
Kzo9I GATC 4 cut(s) 349, 404, 827, 1249
LmnI GCTCC 1 cut(s) 581
LweI GCATC 4 cut(s) 236, 790, 812, 866
MaeI CTAG 2 cut(s) 755, 1344
MaeII ACGT 1 cut(s) 79
MaeIII GTNAC 3 cut(s) 336, 602, 619
MalI GATC 4 cut(s) 351, 406, 829, 1251
MboI GATC 4 cut(s) 349, 404, 827, 1249
MboII GAAGA 4 cut(s) 61, 185, 1191, 1238
MfeI CAATTG 2 cut(s) 132, 847
MflI RGATCY 1 cut(s) 404
MhlI GDGCHC 1 cut(s) 1095
MlyI GAGTC 1 cut(s) 1386
MmeI TCCRAC 1 cut(s) 46
MnlI CCTC 9 cut(s) 109, 292, 362, 622, 897, 930, 1340, 1437, 1450
Mph1103I ATGCAT 1 cut(s) 805
MroXI GAANNNNTTC 1 cut(s) 945
MspI CCGG 1 cut(s) 1100
MspR9I CCNGG 3 cut(s) 963, 1238, 1353
MunI CAATTG 2 cut(s) 132, 847
Mva1269I GAATGC 2 cut(s) 499, 654
MvaI CCWGG 3 cut(s) 963, 1238, 1353
MwoI GCNNNNNNNGC 5 cut(s) 682, 996, 1070, 1512, 1521
NdeII GATC 4 cut(s) 349, 404, 827, 1249
NlaIII CATG 4 cut(s) 350, 365, 916, 1091
NmeAIII GCCGAG 1 cut(s) 237
NmuCI GTSAC 2 cut(s) 336, 619
NsiI ATGCAT 1 cut(s) 805
NspI RCATGY 1 cut(s) 365
PciI ACATGT 1 cut(s) 361
PctI GAATGC 2 cut(s) 499, 654
PdmI GAANNNNTTC 1 cut(s) 945
PfeI GAWTC 5 cut(s) 5, 52, 163, 628, 924
PflMI CCANNNNNTGG 1 cut(s) 1102
PfoI TCCNGGA 1 cut(s) 961
PleI GAGTC 1 cut(s) 1385
PpsI GAGTC 1 cut(s) 1385
PscI ACATGT 1 cut(s) 361
PshBI ATTAAT 1 cut(s) 20
PsiI TTATAA 1 cut(s) 1540
Psp1406I AACGTT 1 cut(s) 79
Psp6I CCWGG 3 cut(s) 961, 1236, 1351
PspEI GGTNACC 1 cut(s) 619
PspGI CCWGG 3 cut(s) 961, 1236, 1351
PspPI GGNCC 1 cut(s) 1349
PstI CTGCAG 1 cut(s) 179
PsuI RGATCY 1 cut(s) 404
RsaI GTAC 4 cut(s) 778, 1032, 1083, 1294
RsaNI GTAC 4 cut(s) 777, 1031, 1082, 1293
Sau3AI GATC 4 cut(s) 349, 404, 827, 1249
Sau96I GGNCC 1 cut(s) 1349
SchI GAGTC 1 cut(s) 1386
ScrFI CCNGG 3 cut(s) 963, 1238, 1353
SduI GDGCHC 1 cut(s) 1095
SfaNI GCATC 4 cut(s) 236, 790, 812, 866
SfcI CTRYAG 1 cut(s) 175
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
SsiI CCGC 2 cut(s) 469, 514
SspI AATATT 1 cut(s) 973
SspMI CTAG 2 cut(s) 755, 1344
StyD4I CCNGG 3 cut(s) 961, 1236, 1351
TaaI ACNGT 4 cut(s) 141, 293, 1046, 1313
TaiI ACGT 1 cut(s) 82
TaqI TCGA 3 cut(s) 99, 670, 1466
TatI WGTACW 3 cut(s) 776, 1030, 1081
TfiI GAWTC 5 cut(s) 5, 52, 163, 628, 924
TscAI CASTG 3 cut(s) 789, 1507, 1513
TseFI GTSAC 2 cut(s) 336, 619
Tsp45I GTSAC 2 cut(s) 336, 619
TspDTI ATGAA 5 cut(s) 371, 832, 885, 999, 1137
TspGWI ACGGA 1 cut(s) 1370
TspRI CASTG 3 cut(s) 789, 1507, 1513
Van91I CCANNNNNTGG 1 cut(s) 1102
VspI ATTAAT 1 cut(s) 20
XapI RAATTY 4 cut(s) 596, 808, 1124, 1229
XceI RCATGY 1 cut(s) 365
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XmiI GTMKAC 1 cut(s) 751
XmnI GAANNNNTTC 1 cut(s) 945
XspI CTAG 2 cut(s) 755, 1344
Zsp2I ATGCAT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.