Rmu_sc0000749.1_g000052

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000749.1
OG0000105
Physical Location & Seq
Forward (+)
227671 .. 232491
4821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000749.1_g000052.1.cds

Sequence Viewer

Length: 3543 bp
atggcgtcaacctcttgtcgtcgtcaatggaaatacgatgtctttctaagtttcagcggggcagatacccgctactattttacgggtcatctgtatgctgcactaaatcagaaaggaattctcacctttatggatgaccgagagcttgagaaaggaaaatccattagacctgaacttttagctgcaattgagcagtccagatgttcgatcgtcattctctcacccaactatgcttcctcgtcatggtgcttagatgaactcgtcaagattattcaatgcatgaaagacatgggccaacaagtcctgcccatcttcatgggcggggtggatccttctgatgtgcggcaccaaaggggaaggtttgagctcaaatgggaagcccaagtacaagtaagggaacatgaagaagtttacgggcaggataatgaggacagactaaatgcctggcgagctgctttgactgaggtggctaatctttctgggtgggatatattgcattcatatgaagcaaaagtaattcaggaaattgttaatcatatactaaagaagtccgtgtatacatcttcaactgttgacaagggcttcataggaatggattcccgcgttgatgatttaataagcaattacatatgtccacagctttgtggggtgcgttttatagggatccatggcatgcgggggataggtaagacaacacttgctcgagctatccatgatgaaatttgtcaggattttgagcaaacctgctttctttccaatgttagagaaatgtctaaaaacaatggcctagtttctctacaagaaaaacttctttccagaatcctgatggcaaaagttgaaaatatagaggatgaatacacaggagctgctatgatagaaaggaggtcgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtccggggagtagaattatcataaccaccacagatgttcagttgttaaaggcacatgatgttgatgctacatacaaggctaacggcttaaactgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatttcccccaccagaagattatttggatctgtgcggtaatattttagggtatgctcaggggcttccgttggctctcgtggttctaggttcctttctatttggtagaagcgctgatgaatgggcaagtgcaatagataggctaaagaacacaccacataaacgaattattgaggtgcttcggattagttttgatggactggatgaaaaagacaaagaaatattcctacacatcgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactaggctattgccagctaaaccctgtcattggcttaagtgttcttgctgatagatctctcataactatctccaacaacgaactgtccatgcatgatttgctacaagaaacgggctgggaaattgttcgtgaactgtctcctaaagagccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgctggagagcaataagggaactgattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagatgccttttcaaagctgtctcaacttagtcttctccatattcgtaatgtggaccttcccaaaggcctcacttgtctttctaattccttgagactccttgaatggactggcaaattgtctgttctgtgtggtggctcactgtttcgattttatgagcagaatttcaacaagttgaagttcctcaaactctgccattctcaaaacattgtggagaccccagacttcgcaggtgttcagaatcttgagactttagatcttgaaggatgtaagaatttggtaagaatccatcaatcccttggatttctcaaaaagcttattttcctgaatcttaaagactgcaaaagtctcaagagtctgcctagtagaattaaaatggaatctcttgaaacattaattctttctaactgctcaaaacttaagaagattcccaaatttgttggaaatatggaacgtttgttgatgctttatcttgatgggactgctattaaggaactgcctaattcaattgaacggctgagtggccttgtgtcattgaatctaagcaactgcagaaatcttgtttgtctcccaagcaccatcaataaattgaagtctgttgaaaatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtgggggagatggactgttttgaggaagctgatgtgagtaatgggtctgtaatagaaatgtcagctacgcatgatctcataagatatgtgagaggttcaatctttcatggacgcgatgtagtttggggatctttaaataagttcttgccttctggattggtgcaaaaaatggtgcagaaagtgaataaagagcaaatgagtttccgcttgcctatatctggtctgtgtaatttaacatatctgaacctgagtaattgcaatcttggtgaagaagcatttgccaacgaatttggtcactttcccaatttggtgaccttgaatctaagtggaaacaattttgttcgcattccttcaggcgttcgattgctttctaagcttgagaactttaacttggagaattgcaagagacttaaagagttgtcagaccttccatcaaatagtatactagatttaagggcagatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagattaaacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatcaagaatgcagtaacatagcatttgaaatgctgaagacattcatgtatcagggaatctgtaataagagggaaactttccaaattgtaattcctggaagtaatattcatgagtggttcagccatcagcgtgtggggtgttcattaagtgtagctctacctgcacattggaataagagtcggtttttgggatttgctttgtgtgttgtttttgtactccatgagcaccatccggtggatgggctttatatagatgaattcaagacttttaatgcaacgcatcatcttgtatgttgcctgaagctcgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttgaatcagatcacctgtggctgttctatgtatcttgtgataaatactttggtacagagtggtggcatgatagttgcagtcatcttgagttcgtatttgaaacccgagggccgggtctgaaggtgaaggagtgtggagttcgtctgatatatgagcaagatgtgcaagagttgaaccaaacaaccactcaatcaagtagtaggatgtctcgatatcaggatatattgattggttttgacattccagttgcgtgggaaaccagcggcactggtagcagaacttgcatgcttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1180

Amino Acids

133.94

Weight (kDa)

6.55

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1880
Acc36I ACCTGC 3 cut(s) 752, 1880, 3037
AccB1I GGYRCC 1 cut(s) 345
AccB7I CCANNNNNTGG 2 cut(s) 1618, 3103
AccI GTMKAC 2 cut(s) 557, 2752
AccII CGCG 2 cut(s) 603, 2424
AciI CCGC 9 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2515, 3504
AclI AACGTT 1 cut(s) 2113
AclWI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2446
AcuI CTGAAG 4 cut(s) 2646, 2924, 3188, 3380
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 387, 2779, 3084, 3295
AfeI AGCGCT 1 cut(s) 1219
AfiI CCNNNNNNNGG 7 cut(s) 243, 1415, 1618, 2528, 3103, 3107, 3352
AflII CTTAAG 2 cut(s) 1420, 2078
AjnI CCWGG 4 cut(s) 443, 1534, 2962, 3237
AjuI GAANNNNNNNTTGG 4 cut(s) 2684, 2716, 2943, 2975
Alw21I GWGCWC 2 cut(s) 369, 3096
AlwI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2446
AlwNI CAGNNNCTG 1 cut(s) 866
Ama87I CYCGRG 2 cut(s) 702, 3345
Aor51HI AGCGCT 1 cut(s) 1219
AoxI GGCC 5 cut(s) 292, 784, 1726, 2182, 3350
ApeKI GCWGC 4 cut(s) 98, 182, 452, 866
AseI ATTAAT 1 cut(s) 2054
Asp700I GAANNNNTTC 6 cut(s) 595, 807, 1077, 1509, 1603, 2909
AspLEI GCGC 1 cut(s) 1220
AspS9I GGNCC 4 cut(s) 292, 974, 1714, 3350
AsuC2I CCSGG 2 cut(s) 978, 3354
AsuHPI GGTGA 6 cut(s) 115, 213, 2588, 2632, 3245, 3376
AvaI CYCGRG 2 cut(s) 702, 3345
AvaII GGWCC 2 cut(s) 974, 1714
BamHI GGATCC 2 cut(s) 328, 663
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 1 cut(s) 369
BarI GAAGNNNNNNTAC 2 cut(s) 369, 401
BauI CACGAG 1 cut(s) 1184
BbsI GAAGAC 3 cut(s) 1572, 1685, 2912
Bbv12I GWGCWC 2 cut(s) 369, 3096
BbvI GCAGC 4 cut(s) 85, 169, 439, 853
BceAI ACGGC 2 cut(s) 1072, 2189
BciT130I CCWGG 4 cut(s) 445, 1536, 2964, 3239
BcnI CCSGG 2 cut(s) 978, 3354
BfaI CTAG 5 cut(s) 788, 1193, 1388, 2022, 2756
BfmI CTRYAG 1 cut(s) 2209
BfoI RGCGCY 1 cut(s) 1221
BfrI CTTAAG 2 cut(s) 1420, 2078
BfuAI ACCTGC 3 cut(s) 752, 1880, 3037
BglII AGATCT 2 cut(s) 1439, 1915
BisI GCNGC 6 cut(s) 99, 183, 344, 453, 867, 3505
BlsI GCNGC 6 cut(s) 100, 184, 345, 454, 868, 3506
Bme1390I CCNGG 6 cut(s) 445, 978, 1536, 2964, 3239, 3354
Bme18I GGWCC 2 cut(s) 974, 1714
BmeT110I CYCGRG 2 cut(s) 702, 3345
BmgT120I GGNCC 4 cut(s) 292, 974, 1714, 3350
BmiI GGNNCC 4 cut(s) 330, 347, 665, 1198
BmrFI CCNGG 6 cut(s) 445, 978, 1536, 2964, 3239, 3354
BmsI GCATC 7 cut(s) 1027, 1654, 2112, 2270, 2791, 2813, 3157
BpiI GAAGAC 3 cut(s) 1572, 1685, 2912
BpmI CTGGAG 1 cut(s) 1604
Bpu10I CCTNAGC 1 cut(s) 1164
BpuEI CTTGAG 6 cut(s) 167, 1771, 1925, 1994, 2708, 3347
BpuMI CCSGG 2 cut(s) 978, 3354
BsaBI GATNNNNATC 2 cut(s) 924, 1368
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1563, 1868
BsaJI CCNNGG 5 cut(s) 667, 977, 1612, 1957, 3346
BsaWI WCCGGW 1 cut(s) 3100
BsaXI ACNNNNNCTCC 2 cut(s) 874, 904
Bsc4I CCNNNNNNNGG 7 cut(s) 243, 1415, 1618, 2528, 3103, 3107, 3352
Bse1I ACTGG 5 cut(s) 971, 1311, 1774, 3485, 3514
Bse8I GATNNNNATC 2 cut(s) 924, 1368
BseBI CCWGG 4 cut(s) 445, 1536, 2964, 3239
BseDI CCNNGG 5 cut(s) 667, 977, 1612, 1957, 3346
BseGI GGATG 8 cut(s) 139, 856, 1315, 1931, 2285, 3097, 3112, 3450
BseJI GATNNNNATC 2 cut(s) 924, 1368
BseLI CCNNNNNNNGG 7 cut(s) 243, 1415, 1618, 2528, 3103, 3107, 3352
BseMII CTCAG 4 cut(s) 453, 1178, 2168, 2549
BseNI ACTGG 5 cut(s) 971, 1311, 1774, 3485, 3514
BseXI GCAGC 4 cut(s) 85, 169, 439, 853
BseYI CCCAGC 1 cut(s) 1500
BsgI GTGCAG 3 cut(s) 84, 2504, 3015
Bsh1236I CGCG 2 cut(s) 603, 2424
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 5 cut(s) 294, 786, 1728, 2184, 3352
BshNI GGYRCC 1 cut(s) 345
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 2 cut(s) 369, 3096
BsiHKCI CYCGRG 2 cut(s) 702, 3345
BsiSI CCGG 3 cut(s) 977, 3101, 3353
BslFI GGGAC 1 cut(s) 2152
BslI CCNNNNNNNGG 7 cut(s) 243, 1415, 1618, 2528, 3103, 3107, 3352
BsmFI GGGAC 1 cut(s) 2152
BsmI GAATGC 3 cut(s) 496, 2655, 2882
BsnI GGCC 5 cut(s) 294, 786, 1728, 2184, 3352
Bso31I GGTCTC 2 cut(s) 1563, 1868
BsoBI CYCGRG 2 cut(s) 702, 3345
Bsp1286I GDGCHC 2 cut(s) 369, 3096
Bsp19I CCATGG 1 cut(s) 667
BspACI CCGC 9 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2515, 3504
BspANI GGCC 5 cut(s) 294, 786, 1728, 2184, 3352
BspCNI CTCAG 4 cut(s) 454, 1177, 2169, 2550
BspFNI CGCG 2 cut(s) 603, 2424
BspHI TCATGA 2 cut(s) 1561, 2977
BspLI GGNNCC 4 cut(s) 330, 347, 665, 1198
BspMAI CTGCAG 1 cut(s) 2213
BspMI ACCTGC 3 cut(s) 752, 1880, 3037
BspPI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2446
BspT107I GGYRCC 1 cut(s) 345
BspTI CTTAAG 2 cut(s) 1420, 2078
BspTNI GGTCTC 2 cut(s) 1563, 1868
BsrI ACTGG 5 cut(s) 971, 1311, 1774, 3485, 3514
BssECI CCNNGG 5 cut(s) 667, 977, 1612, 1957, 3346
BssNAI GTATAC 2 cut(s) 558, 2753
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1184
BssT1I CCWWGG 3 cut(s) 667, 1612, 1957
Bst1107I GTATAC 2 cut(s) 558, 2753
Bst2BI CACGAG 1 cut(s) 1184
Bst2UI CCWGG 4 cut(s) 445, 1536, 2964, 3239
Bst4CI ACNGT 6 cut(s) 571, 1067, 1470, 1521, 1803, 2327
Bst6I CTCTTC 1 cut(s) 3175
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 1420, 2078
BstAPI GCANNNNNTGC 3 cut(s) 1483, 3403, 3522
BstC8I GCNNGC 7 cut(s) 450, 674, 1345, 1400, 2519, 3210, 3527
BstDSI CCRYGG 1 cut(s) 667
BstEII GGTNACC 1 cut(s) 2620
BstF5I GGATG 8 cut(s) 139, 856, 1315, 1931, 2285, 3097, 3112, 3450
BstFNI CGCG 2 cut(s) 603, 2424
BstH2I RGCGCY 1 cut(s) 1221
BstHHI GCGC 1 cut(s) 1220
BstMCI CGRYCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 7 cut(s) 449, 1483, 2683, 3029, 3403, 3513, 3522
BstNI CCWGG 4 cut(s) 445, 1536, 2964, 3239
BstNSI RCATGY 2 cut(s) 676, 3529
BstPI GGTNACC 1 cut(s) 2620
BstSCI CCNGG 6 cut(s) 443, 976, 1534, 2962, 3237, 3352
BstSFI CTRYAG 1 cut(s) 2209
BstUI CGCG 2 cut(s) 603, 2424
BstV1I GCAGC 4 cut(s) 85, 169, 439, 853
BstV2I GAAGAC 3 cut(s) 1572, 1685, 2912
BstX2I RGATCY 6 cut(s) 328, 663, 1135, 1439, 1915, 2438
BstXI CCANNNNNNTGG 2 cut(s) 316, 3492
BstYI RGATCY 6 cut(s) 328, 663, 1135, 1439, 1915, 2438
BstZ17I GTATAC 2 cut(s) 558, 2753
BsuRI GGCC 5 cut(s) 294, 786, 1728, 2184, 3352
BtgI CCRYGG 1 cut(s) 667
BtgZI GCGATG 2 cut(s) 1324, 2439
BtsCI GGATG 8 cut(s) 139, 856, 1315, 1931, 2285, 3097, 3112, 3450
BtsIMutI CAGTG 3 cut(s) 1799, 2783, 3507
BveI ACCTGC 3 cut(s) 752, 1880, 3037
Cac8I GCNNGC 7 cut(s) 450, 674, 1345, 1400, 2519, 3210, 3527
CaiI CAGNNNCTG 1 cut(s) 866
CciI TCATGA 2 cut(s) 1561, 2977
CfoI GCGC 1 cut(s) 1220
Cfr13I GGNCC 4 cut(s) 292, 974, 1714, 3350
CseI GACGC 1 cut(s) 2430
Csp6I GTAC 4 cut(s) 386, 2778, 3083, 3294
CviQI GTAC 4 cut(s) 386, 2778, 3083, 3294
DraI TTTAAA 1 cut(s) 2445
Eam1104I CTCTTC 1 cut(s) 3175
EarI CTCTTC 1 cut(s) 3175
Ecl136II GAGCTC 1 cut(s) 367
Eco130I CCWWGG 3 cut(s) 667, 1612, 1957
Eco147I AGGCCT 1 cut(s) 1728
Eco24I GRGCYC 1 cut(s) 369
Eco31I GGTCTC 2 cut(s) 1563, 1868
Eco32I GATATC 1 cut(s) 3455
Eco47I GGWCC 2 cut(s) 974, 1714
Eco47III AGCGCT 1 cut(s) 1219
Eco53kI GAGCTC 1 cut(s) 367
Eco57I CTGAAG 4 cut(s) 2646, 2924, 3188, 3380
Eco88I CYCGRG 2 cut(s) 702, 3345
Eco91I GGTNACC 1 cut(s) 2620
EcoICRI GAGCTC 1 cut(s) 367
EcoO65I GGTNACC 1 cut(s) 2620
EcoRI GAATTC 2 cut(s) 117, 3125
EcoRII CCWGG 4 cut(s) 443, 1534, 2962, 3237
EcoRV GATATC 1 cut(s) 3455
EcoT14I CCWWGG 3 cut(s) 667, 1612, 1957
EcoT22I ATGCAT 3 cut(s) 281, 1479, 2806
EcoT38I GRGCYC 1 cut(s) 369
ErhI CCWWGG 3 cut(s) 667, 1612, 1957
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 1 cut(s) 2152
FauI CCCGC 5 cut(s) 50, 77, 314, 608, 669
FauNDI CATATG 2 cut(s) 502, 629
FblI GTMKAC 2 cut(s) 557, 2752
Fnu4HI GCNGC 6 cut(s) 99, 183, 344, 453, 867, 3505
FokI GGATG 8 cut(s) 146, 863, 1322, 1938, 2292, 3084, 3119, 3457
FriOI GRGCYC 1 cut(s) 369
Fsp4HI GCNGC 6 cut(s) 99, 183, 344, 453, 867, 3505
FspBI CTAG 5 cut(s) 788, 1193, 1388, 2022, 2756
GlaI GCGC 1 cut(s) 1219
GluI GCNGC 6 cut(s) 99, 183, 344, 453, 867, 3505
GsaI CCCAGC 1 cut(s) 1504
GsuI CTGGAG 1 cut(s) 1604
HaeII RGCGCY 1 cut(s) 1221
HaeIII GGCC 5 cut(s) 294, 786, 1728, 2184, 3352
HapII CCGG 3 cut(s) 977, 3101, 3353
HgaI GACGC 1 cut(s) 2430
HhaI GCGC 1 cut(s) 1220
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1218
HinP1I GCGC 1 cut(s) 1218
HincII GTYRAC 4 cut(s) 9, 574, 933, 1632
HindII GTYRAC 4 cut(s) 9, 574, 933, 1632
HindIII AAGCTT 2 cut(s) 1973, 2684
HpaII CCGG 3 cut(s) 977, 3101, 3353
HphI GGTGA 6 cut(s) 115, 213, 2588, 2632, 3245, 3376
Hpy188I TCNGA 9 cut(s) 111, 337, 1290, 1899, 2553, 2734, 3250, 3360, 3387
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 6 cut(s) 571, 1067, 1470, 1521, 1803, 2327
HpyCH4IV ACGT 2 cut(s) 1543, 2113
HpyF10VI GCNNNNNNNGC 7 cut(s) 449, 1483, 2683, 3029, 3403, 3513, 3522
HpySE526I ACGT 2 cut(s) 1543, 2113
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1218
LmnI GCTCC 1 cut(s) 863
Lsp1109I GCAGC 4 cut(s) 85, 169, 439, 853
LweI GCATC 7 cut(s) 1027, 1654, 2112, 2270, 2791, 2813, 3157
MaeI CTAG 5 cut(s) 788, 1193, 1388, 2022, 2756
MaeII ACGT 2 cut(s) 1543, 2113
MaeIII GTNAC 4 cut(s) 1375, 2603, 2620, 2882
MfeI CAATTG 3 cut(s) 186, 2166, 2848
MflI RGATCY 6 cut(s) 328, 663, 1135, 1439, 1915, 2438
MhlI GDGCHC 2 cut(s) 369, 3096
MlyI GAGTC 3 cut(s) 1749, 2023, 3055
MmeI TCCRAC 2 cut(s) 1482, 2080
Mph1103I ATGCAT 3 cut(s) 281, 1479, 2806
MroXI GAANNNNTTC 6 cut(s) 595, 807, 1077, 1509, 1603, 2909
MslI CAYNNNNRTG 7 cut(s) 93, 128, 314, 501, 590, 1622, 2997
MspA1I CMGCKG 2 cut(s) 57, 3504
MspCI CTTAAG 2 cut(s) 1420, 2078
MspI CCGG 3 cut(s) 977, 3101, 3353
MspR9I CCNGG 6 cut(s) 445, 978, 1536, 2964, 3239, 3354
MunI CAATTG 3 cut(s) 186, 2166, 2848
Mva1269I GAATGC 3 cut(s) 496, 2655, 2882
MvaI CCWGG 4 cut(s) 445, 1536, 2964, 3239
MvnI CGCG 2 cut(s) 603, 2424
MwoI GCNNNNNNNGC 7 cut(s) 449, 1483, 2683, 3029, 3403, 3513, 3522
NciI CCSGG 2 cut(s) 978, 3354
NcoI CCATGG 1 cut(s) 667
NdeI CATATG 2 cut(s) 502, 629
NlaIV GGNNCC 4 cut(s) 330, 347, 665, 1198
NmeAIII GCCGAG 1 cut(s) 2271
NmuCI GTSAC 3 cut(s) 1375, 2603, 2620
NsiI ATGCAT 3 cut(s) 281, 1479, 2806
NspI RCATGY 2 cut(s) 676, 3529
PaeI GCATGC 2 cut(s) 676, 3529
PaeR7I CTCGAG 1 cut(s) 702
PagI TCATGA 2 cut(s) 1561, 2977
PaqCI CACCTGC 1 cut(s) 1880
PceI AGGCCT 1 cut(s) 1728
PctI GAATGC 3 cut(s) 496, 2655, 2882
PdmI GAANNNNTTC 6 cut(s) 595, 807, 1077, 1509, 1603, 2909
PflMI CCANNNNNTGG 2 cut(s) 1618, 3103
PfoI TCCNGGA 1 cut(s) 2962
PkrI GCNGC 6 cut(s) 100, 184, 345, 454, 868, 3506
Ple19I CGATCG 1 cut(s) 210
PleI GAGTC 3 cut(s) 1749, 2022, 3054
PpsI GAGTC 3 cut(s) 1749, 2022, 3054
PshBI ATTAAT 1 cut(s) 2054
Psp124BI GAGCTC 1 cut(s) 369
Psp1406I AACGTT 1 cut(s) 2113
Psp6I CCWGG 4 cut(s) 443, 1534, 2962, 3237
PspEI GGTNACC 1 cut(s) 2620
PspFI CCCAGC 1 cut(s) 1500
PspGI CCWGG 4 cut(s) 443, 1534, 2962, 3237
PspN4I GGNNCC 4 cut(s) 330, 347, 665, 1198
PspPI GGNCC 4 cut(s) 292, 974, 1714, 3350
PspXI VCTCGAGB 1 cut(s) 702
PstI CTGCAG 1 cut(s) 2213
PstNI CAGNNNCTG 1 cut(s) 866
PsuI RGATCY 6 cut(s) 328, 663, 1135, 1439, 1915, 2438
PvuI CGATCG 1 cut(s) 210
RsaI GTAC 4 cut(s) 387, 2779, 3084, 3295
RsaNI GTAC 4 cut(s) 386, 2778, 3083, 3294
RseI CAYNNNNRTG 7 cut(s) 93, 128, 314, 501, 590, 1622, 2997
SacI GAGCTC 1 cut(s) 369
SatI GCNGC 6 cut(s) 99, 183, 344, 453, 867, 3505
Sau96I GGNCC 4 cut(s) 292, 974, 1714, 3350
SchI GAGTC 3 cut(s) 1749, 2023, 3055
ScrFI CCNGG 6 cut(s) 445, 978, 1536, 2964, 3239, 3354
SduI GDGCHC 2 cut(s) 369, 3096
SfaNI GCATC 7 cut(s) 1027, 1654, 2112, 2270, 2791, 2813, 3157
SfcI CTRYAG 1 cut(s) 2209
Sfr274I CTCGAG 1 cut(s) 702
SinI GGWCC 2 cut(s) 974, 1714
SlaI CTCGAG 1 cut(s) 702
SmiMI CAYNNNNRTG 7 cut(s) 93, 128, 314, 501, 590, 1622, 2997
SmlI CTYRAG 9 cut(s) 146, 702, 1420, 1750, 1904, 2009, 2078, 2687, 3326
SmoI CTYRAG 9 cut(s) 146, 702, 1420, 1750, 1904, 2009, 2078, 2687, 3326
SphI GCATGC 2 cut(s) 676, 3529
SseBI AGGCCT 1 cut(s) 1728
SsiI CCGC 9 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2515, 3504
SspI AATATT 3 cut(s) 1150, 1329, 2974
SspMI CTAG 5 cut(s) 788, 1193, 1388, 2022, 2756
SstI GAGCTC 1 cut(s) 369
StuI AGGCCT 1 cut(s) 1728
StyD4I CCNGG 6 cut(s) 443, 976, 1534, 2962, 3237, 3352
StyI CCWWGG 3 cut(s) 667, 1612, 1957
TaaI ACNGT 6 cut(s) 571, 1067, 1470, 1521, 1803, 2327
TaiI ACGT 2 cut(s) 1546, 2116
TaqI TCGA 6 cut(s) 206, 703, 1807, 2671, 3174, 3451
TaqII GACCGA 1 cut(s) 153
TatI WGTACW 3 cut(s) 385, 2777, 3082
TauI GCSGC 2 cut(s) 346, 3507
TscAI CASTG 3 cut(s) 1806, 2790, 3514
TseFI GTSAC 3 cut(s) 1375, 2603, 2620
TseI GCWGC 4 cut(s) 98, 182, 452, 866
Tsp45I GTSAC 3 cut(s) 1375, 2603, 2620
TspGWI ACGGA 2 cut(s) 541, 1164
TspRI CASTG 3 cut(s) 1806, 2790, 3514
Van91I CCANNNNNTGG 2 cut(s) 1618, 3103
Vha464I CTTAAG 2 cut(s) 1420, 2078
VpaK11BI GGWCC 2 cut(s) 974, 1714
VspI ATTAAT 1 cut(s) 2054
XceI RCATGY 2 cut(s) 676, 3529
XcmI CCANNNNNNNNNTGG 3 cut(s) 823, 1955, 3104
XhoI CTCGAG 1 cut(s) 702
XmiI GTMKAC 2 cut(s) 557, 2752
XmnI GAANNNNTTC 6 cut(s) 595, 807, 1077, 1509, 1603, 2909
XspI CTAG 5 cut(s) 788, 1193, 1388, 2022, 2756
Zsp2I ATGCAT 3 cut(s) 281, 1479, 2806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.