resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 11 - 192 | 1e-49 | TIR domain |
| TIR_2 | PF13676 | 14 - 116 | 3.8e-14 | TIR domain |
| NB-ARC | PF00931 | 219 - 372 | 2.3e-18 | NB-ARC domain |
| AAA_22 | PF13401 | 220 - 318 | 8.1e-06 | AAA domain |
| NACHT | PF05729 | 222 - 319 | 6.4e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 439 - 510 | 1.5e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 607 - 691 | 1.3e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 618 - 687 | 5.7e-10 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1661 |
| Acc36I | ACCTGC | 2 cut(s) | 758, 1661 |
| AccB1I | GGYRCC | 1 cut(s) | 342 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 647 |
| AccI | GTMKAC | 2 cut(s) | 563, 2521 |
| AccII | CGCG | 3 cut(s) | 70, 72, 2424 |
| AciI | CCGC | 6 cut(s) | 72, 340, 607, 682, 889, 1633 |
| AclWI | GGATC | 8 cut(s) | 320, 333, 664, 677, 939, 1383, 1532, 2227 |
| AcsI | RAATTY | 4 cut(s) | 117, 726, 1603, 2366 |
| AcuI | CTGAAG | 1 cut(s) | 2415 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfeI | AGCGCT | 1 cut(s) | 1225 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 647, 1421, 2297 |
| AjiI | CACGTC | 1 cut(s) | 337 |
| AjnI | CCWGG | 3 cut(s) | 494, 982, 1540 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2453, 2485 |
| Alw21I | GWGCWC | 1 cut(s) | 1908 |
| Alw26I | GTCTC | 8 cut(s) | 1533, 1569, 1649, 1682, 1793, 1913, 2306, 2479 |
| AlwI | GGATC | 8 cut(s) | 320, 333, 664, 677, 939, 1383, 1532, 2227 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 872 |
| Ama87I | CYCGRG | 2 cut(s) | 708, 1871 |
| Aor51HI | AGCGCT | 1 cut(s) | 1225 |
| AoxI | GGCC | 3 cut(s) | 292, 790, 1963 |
| ApeKI | GCWGC | 4 cut(s) | 182, 455, 872, 1848 |
| ApoI | RAATTY | 4 cut(s) | 117, 726, 1603, 2366 |
| AseI | ATTAAT | 1 cut(s) | 1835 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 813, 1083, 1515 |
| AspLEI | GCGC | 2 cut(s) | 72, 1226 |
| AspS9I | GGNCC | 2 cut(s) | 292, 980 |
| AsuHPI | GGTGA | 2 cut(s) | 115, 2357 |
| AvaI | CYCGRG | 2 cut(s) | 708, 1871 |
| AvaII | GGWCC | 1 cut(s) | 980 |
| BamHI | GGATCC | 2 cut(s) | 325, 669 |
| BanI | GGYRCC | 1 cut(s) | 342 |
| BauI | CACGAG | 1 cut(s) | 1190 |
| BbsI | GAAGAC | 2 cut(s) | 304, 1578 |
| Bbv12I | GWGCWC | 1 cut(s) | 1908 |
| BbvI | GCAGC | 4 cut(s) | 169, 442, 859, 1835 |
| BccI | CCATC | 7 cut(s) | 826, 1301, 1737, 2027, 2095, 2518, 2534 |
| BceAI | ACGGC | 1 cut(s) | 1970 |
| BciT130I | CCWGG | 3 cut(s) | 496, 984, 1542 |
| BclI | TGATCA | 1 cut(s) | 721 |
| BcoDI | GTCTC | 8 cut(s) | 1533, 1569, 1649, 1682, 1793, 1913, 2306, 2479 |
| BfaI | CTAG | 4 cut(s) | 104, 1394, 1845, 2525 |
| BfmI | CTRYAG | 1 cut(s) | 1533 |
| BfoI | RGCGCY | 1 cut(s) | 1227 |
| BfuAI | ACCTGC | 2 cut(s) | 758, 1661 |
| BglII | AGATCT | 2 cut(s) | 1445, 1696 |
| BisI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 1849 |
| BlsI | GCNGC | 5 cut(s) | 184, 342, 457, 874, 1850 |
| Bme1390I | CCNGG | 3 cut(s) | 496, 984, 1542 |
| Bme18I | GGWCC | 1 cut(s) | 980 |
| BmeT110I | CYCGRG | 2 cut(s) | 708, 1871 |
| BmgBI | CACGTC | 1 cut(s) | 337 |
| BmgT120I | GGNCC | 2 cut(s) | 292, 980 |
| BmiI | GGNNCC | 3 cut(s) | 327, 344, 671 |
| BmrFI | CCNGG | 3 cut(s) | 496, 984, 1542 |
| BmsI | GCATC | 5 cut(s) | 1033, 1150, 1470, 2051, 2192 |
| BoxI | GACNNNNGTC | 1 cut(s) | 467 |
| BpiI | GAAGAC | 2 cut(s) | 304, 1578 |
| BpmI | CTGGAG | 1 cut(s) | 1610 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1170 |
| BpuEI | CTTGAG | 3 cut(s) | 167, 1706, 2477 |
| BsaBI | GATNNNNATC | 3 cut(s) | 930, 1374, 2544 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 3 cut(s) | 1569, 1649, 2306 |
| BsaJI | CCNNGG | 3 cut(s) | 673, 983, 1738 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 288, 318 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 647, 1421, 2297 |
| Bse1I | ACTGG | 3 cut(s) | 84, 977, 1317 |
| Bse8I | GATNNNNATC | 3 cut(s) | 930, 1374, 2544 |
| BseBI | CCWGG | 3 cut(s) | 496, 984, 1542 |
| BseDI | CCNNGG | 3 cut(s) | 673, 983, 1738 |
| BseGI | GGATG | 7 cut(s) | 139, 259, 862, 1321, 1712, 2066, 2207 |
| BseJI | GATNNNNATC | 3 cut(s) | 930, 1374, 2544 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 647, 1421, 2297 |
| BseMII | CTCAG | 5 cut(s) | 456, 1184, 1804, 1949, 2318 |
| BseNI | ACTGG | 3 cut(s) | 84, 977, 1317 |
| BseXI | GCAGC | 4 cut(s) | 169, 442, 859, 1835 |
| BseYI | CCCAGC | 2 cut(s) | 289, 1506 |
| Bsh1236I | CGCG | 3 cut(s) | 70, 72, 2424 |
| BshFI | GGCC | 3 cut(s) | 294, 792, 1965 |
| BshNI | GGYRCC | 1 cut(s) | 342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1908 |
| BsiHKCI | CYCGRG | 2 cut(s) | 708, 1871 |
| BslFI | GGGAC | 1 cut(s) | 1104 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 647, 1421, 2297 |
| BsmAI | GTCTC | 8 cut(s) | 1533, 1569, 1649, 1682, 1793, 1913, 2306, 2479 |
| BsmFI | GGGAC | 1 cut(s) | 1104 |
| BsmI | GAATGC | 3 cut(s) | 609, 1898, 2436 |
| BsnI | GGCC | 3 cut(s) | 294, 792, 1965 |
| Bso31I | GGTCTC | 3 cut(s) | 1569, 1649, 2306 |
| BsoBI | CYCGRG | 2 cut(s) | 708, 1871 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1908 |
| Bsp19I | CCATGG | 1 cut(s) | 673 |
| BspACI | CCGC | 6 cut(s) | 72, 340, 607, 682, 889, 1633 |
| BspANI | GGCC | 3 cut(s) | 294, 792, 1965 |
| BspCNI | CTCAG | 5 cut(s) | 457, 1183, 1803, 1950, 2319 |
| BspFNI | CGCG | 3 cut(s) | 70, 72, 2424 |
| BspHI | TCATGA | 3 cut(s) | 613, 1519, 1567 |
| BspLI | GGNNCC | 3 cut(s) | 327, 344, 671 |
| BspMI | ACCTGC | 2 cut(s) | 758, 1661 |
| BspPI | GGATC | 8 cut(s) | 320, 333, 664, 677, 939, 1383, 1532, 2227 |
| BspT107I | GGYRCC | 1 cut(s) | 342 |
| BspTNI | GGTCTC | 3 cut(s) | 1569, 1649, 2306 |
| BsrI | ACTGG | 3 cut(s) | 84, 977, 1317 |
| BssECI | CCNNGG | 3 cut(s) | 673, 983, 1738 |
| BssNAI | GTATAC | 1 cut(s) | 564 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 1190 |
| BssT1I | CCWWGG | 2 cut(s) | 673, 1738 |
| Bst1107I | GTATAC | 1 cut(s) | 564 |
| Bst2BI | CACGAG | 1 cut(s) | 1190 |
| Bst2UI | CCWGG | 3 cut(s) | 496, 984, 1542 |
| Bst4CI | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1489 |
| BstC8I | GCNNGC | 7 cut(s) | 488, 492, 680, 961, 1351, 1406, 2288 |
| BstDSI | CCRYGG | 1 cut(s) | 673 |
| BstEII | GGTNACC | 1 cut(s) | 2389 |
| BstF5I | GGATG | 7 cut(s) | 139, 259, 862, 1321, 1712, 2066, 2207 |
| BstFNI | CGCG | 3 cut(s) | 70, 72, 2424 |
| BstH2I | RGCGCY | 1 cut(s) | 1227 |
| BstHHI | GCGC | 2 cut(s) | 72, 1226 |
| BstMAI | GTCTC | 8 cut(s) | 1533, 1569, 1649, 1682, 1793, 1913, 2306, 2479 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 452, 684, 1489, 2452 |
| BstNI | CCWGG | 3 cut(s) | 496, 984, 1542 |
| BstNSI | RCATGY | 2 cut(s) | 494, 682 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 467 |
| BstPI | GGTNACC | 1 cut(s) | 2389 |
| BstSCI | CCNGG | 3 cut(s) | 494, 982, 1540 |
| BstSFI | CTRYAG | 1 cut(s) | 1533 |
| BstUI | CGCG | 3 cut(s) | 70, 72, 2424 |
| BstV1I | GCAGC | 4 cut(s) | 169, 442, 859, 1835 |
| BstV2I | GAAGAC | 2 cut(s) | 304, 1578 |
| BstX2I | RGATCY | 6 cut(s) | 325, 669, 1445, 1537, 1696, 2219 |
| BstYI | RGATCY | 6 cut(s) | 325, 669, 1445, 1537, 1696, 2219 |
| BstZ17I | GTATAC | 1 cut(s) | 564 |
| BsuRI | GGCC | 3 cut(s) | 294, 792, 1965 |
| BtgI | CCRYGG | 1 cut(s) | 673 |
| BtrI | CACGTC | 1 cut(s) | 337 |
| BtsCI | GGATG | 7 cut(s) | 139, 259, 862, 1321, 1712, 2066, 2207 |
| BveI | ACCTGC | 2 cut(s) | 758, 1661 |
| Cac8I | GCNNGC | 7 cut(s) | 488, 492, 680, 961, 1351, 1406, 2288 |
| CaiI | CAGNNNCTG | 1 cut(s) | 872 |
| CciI | TCATGA | 3 cut(s) | 613, 1519, 1567 |
| CfoI | GCGC | 2 cut(s) | 72, 1226 |
| Cfr13I | GGNCC | 2 cut(s) | 292, 980 |
| DraI | TTTAAA | 1 cut(s) | 2226 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| EciI | GGCGGA | 1 cut(s) | 1622 |
| Eco130I | CCWWGG | 2 cut(s) | 673, 1738 |
| Eco31I | GGTCTC | 3 cut(s) | 1569, 1649, 2306 |
| Eco47I | GGWCC | 1 cut(s) | 980 |
| Eco47III | AGCGCT | 1 cut(s) | 1225 |
| Eco57I | CTGAAG | 1 cut(s) | 2415 |
| Eco88I | CYCGRG | 2 cut(s) | 708, 1871 |
| Eco91I | GGTNACC | 1 cut(s) | 2389 |
| EcoO65I | GGTNACC | 1 cut(s) | 2389 |
| EcoRI | GAATTC | 2 cut(s) | 117, 2366 |
| EcoRII | CCWGG | 3 cut(s) | 494, 982, 1540 |
| EcoT14I | CCWWGG | 2 cut(s) | 673, 1738 |
| EcoT22I | ATGCAT | 2 cut(s) | 281, 1485 |
| ErhI | CCWWGG | 2 cut(s) | 673, 1738 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 798, 830 |
| FaqI | GGGAC | 1 cut(s) | 1104 |
| FauI | CCCGC | 2 cut(s) | 65, 675 |
| FbaI | TGATCA | 1 cut(s) | 721 |
| FblI | GTMKAC | 2 cut(s) | 563, 2521 |
| Fnu4HI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 1849 |
| FokI | GGATG | 7 cut(s) | 146, 266, 869, 1328, 1719, 2073, 2214 |
| Fsp4HI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 1849 |
| FspBI | CTAG | 4 cut(s) | 104, 1394, 1845, 2525 |
| GlaI | GCGC | 2 cut(s) | 71, 1225 |
| GluI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 1849 |
| GsaI | CCCAGC | 2 cut(s) | 293, 1510 |
| GsuI | CTGGAG | 1 cut(s) | 1610 |
| HaeII | RGCGCY | 1 cut(s) | 1227 |
| HaeIII | GGCC | 3 cut(s) | 294, 792, 1965 |
| HhaI | GCGC | 2 cut(s) | 72, 1226 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 2 cut(s) | 70, 1224 |
| HinP1I | GCGC | 2 cut(s) | 70, 1224 |
| HincII | GTYRAC | 3 cut(s) | 9, 580, 939 |
| HindII | GTYRAC | 3 cut(s) | 9, 580, 939 |
| HindIII | AAGCTT | 2 cut(s) | 1754, 2453 |
| HphI | GGTGA | 2 cut(s) | 115, 2357 |
| Hpy166II | GTNNAC | 7 cut(s) | 9, 101, 564, 580, 641, 939, 2522 |
| Hpy188I | TCNGA | 6 cut(s) | 111, 334, 1296, 1680, 2322, 2503 |
| Hpy8I | GTNNAC | 7 cut(s) | 9, 101, 564, 580, 641, 939, 2522 |
| Hpy99I | CGWCG | 1 cut(s) | 24 |
| HpyAV | CCTTC | 8 cut(s) | 339, 348, 1360, 1697, 2250, 2342, 2439, 2516 |
| HpyCH4III | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| HpyCH4IV | ACGT | 4 cut(s) | 336, 637, 1549, 2315 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 452, 684, 1489, 2452 |
| HpySE526I | ACGT | 4 cut(s) | 336, 637, 1549, 2315 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 2 cut(s) | 70, 1224 |
| Ksp22I | TGATCA | 1 cut(s) | 721 |
| LmnI | GCTCC | 2 cut(s) | 869, 2351 |
| Lsp1109I | GCAGC | 4 cut(s) | 169, 442, 859, 1835 |
| LweI | GCATC | 5 cut(s) | 1033, 1150, 1470, 2051, 2192 |
| MaeI | CTAG | 4 cut(s) | 104, 1394, 1845, 2525 |
| MaeII | ACGT | 4 cut(s) | 336, 637, 1549, 2315 |
| MaeIII | GTNAC | 3 cut(s) | 1381, 2372, 2389 |
| MfeI | CAATTG | 1 cut(s) | 1947 |
| MflI | RGATCY | 6 cut(s) | 325, 669, 1445, 1537, 1696, 2219 |
| MhlI | GDGCHC | 1 cut(s) | 1908 |
| MlyI | GAGTC | 2 cut(s) | 188, 1804 |
| MmeI | TCCRAC | 2 cut(s) | 1488, 1861 |
| Mph1103I | ATGCAT | 2 cut(s) | 281, 1485 |
| MroXI | GAANNNNTTC | 3 cut(s) | 813, 1083, 1515 |
| MslI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| MspR9I | CCNGG | 3 cut(s) | 496, 984, 1542 |
| MunI | CAATTG | 1 cut(s) | 1947 |
| Mva1269I | GAATGC | 3 cut(s) | 609, 1898, 2436 |
| MvaI | CCWGG | 3 cut(s) | 496, 984, 1542 |
| MvnI | CGCG | 3 cut(s) | 70, 72, 2424 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 452, 684, 1489, 2452 |
| NcoI | CCATGG | 1 cut(s) | 673 |
| NlaIV | GGNNCC | 3 cut(s) | 327, 344, 671 |
| NmeAIII | GCCGAG | 1 cut(s) | 2052 |
| NmuCI | GTSAC | 1 cut(s) | 1381 |
| NsiI | ATGCAT | 2 cut(s) | 281, 1485 |
| NspI | RCATGY | 2 cut(s) | 494, 682 |
| PaeI | GCATGC | 2 cut(s) | 494, 682 |
| PaeR7I | CTCGAG | 1 cut(s) | 708 |
| PagI | TCATGA | 3 cut(s) | 613, 1519, 1567 |
| PaqCI | CACCTGC | 1 cut(s) | 1661 |
| PctI | GAATGC | 3 cut(s) | 609, 1898, 2436 |
| PdmI | GAANNNNTTC | 3 cut(s) | 813, 1083, 1515 |
| PfeI | GAWTC | 8 cut(s) | 1681, 1725, 1768, 1820, 1867, 1978, 2398, 2545 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 647 |
| PkrI | GCNGC | 5 cut(s) | 184, 342, 457, 874, 1850 |
| PleI | GAGTC | 2 cut(s) | 188, 1803 |
| PpsI | GAGTC | 2 cut(s) | 188, 1803 |
| PshAI | GACNNNNGTC | 1 cut(s) | 467 |
| PshBI | ATTAAT | 1 cut(s) | 1835 |
| Psp6I | CCWGG | 3 cut(s) | 494, 982, 1540 |
| PspEI | GGTNACC | 1 cut(s) | 2389 |
| PspFI | CCCAGC | 2 cut(s) | 289, 1506 |
| PspGI | CCWGG | 3 cut(s) | 494, 982, 1540 |
| PspN4I | GGNNCC | 3 cut(s) | 327, 344, 671 |
| PspPI | GGNCC | 2 cut(s) | 292, 980 |
| PspXI | VCTCGAGB | 1 cut(s) | 708 |
| PstNI | CAGNNNCTG | 1 cut(s) | 872 |
| PsuI | RGATCY | 6 cut(s) | 325, 669, 1445, 1537, 1696, 2219 |
| RseI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| SatI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 1849 |
| Sau96I | GGNCC | 2 cut(s) | 292, 980 |
| SchI | GAGTC | 2 cut(s) | 188, 1804 |
| ScrFI | CCNGG | 3 cut(s) | 496, 984, 1542 |
| SduI | GDGCHC | 1 cut(s) | 1908 |
| SfaNI | GCATC | 5 cut(s) | 1033, 1150, 1470, 2051, 2192 |
| SfcI | CTRYAG | 1 cut(s) | 1533 |
| Sfr274I | CTCGAG | 1 cut(s) | 708 |
| SinI | GGWCC | 1 cut(s) | 980 |
| SlaI | CTCGAG | 1 cut(s) | 708 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| SmlI | CTYRAG | 4 cut(s) | 146, 708, 1685, 2456 |
| SmoI | CTYRAG | 4 cut(s) | 146, 708, 1685, 2456 |
| SphI | GCATGC | 2 cut(s) | 494, 682 |
| SsiI | CCGC | 6 cut(s) | 72, 340, 607, 682, 889, 1633 |
| SspI | AATATT | 1 cut(s) | 1335 |
| SspMI | CTAG | 4 cut(s) | 104, 1394, 1845, 2525 |
| StyD4I | CCNGG | 3 cut(s) | 494, 982, 1540 |
| StyI | CCWWGG | 2 cut(s) | 673, 1738 |
| TaaI | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| TaiI | ACGT | 4 cut(s) | 339, 640, 1552, 2318 |
| TaqI | TCGA | 4 cut(s) | 709, 1478, 1608, 2440 |
| TaqII | GACCGA | 2 cut(s) | 153, 759 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TfiI | GAWTC | 8 cut(s) | 1681, 1725, 1768, 1820, 1867, 1978, 2398, 2545 |
| TseFI | GTSAC | 1 cut(s) | 1381 |
| TseI | GCWGC | 4 cut(s) | 182, 455, 872, 1848 |
| Tsp45I | GTSAC | 1 cut(s) | 1381 |
| TspGWI | ACGGA | 3 cut(s) | 238, 547, 1170 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 647 |
| VpaK11BI | GGWCC | 1 cut(s) | 980 |
| VspI | ATTAAT | 1 cut(s) | 1835 |
| XapI | RAATTY | 4 cut(s) | 117, 726, 1603, 2366 |
| XceI | RCATGY | 2 cut(s) | 494, 682 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 829, 1736 |
| XhoI | CTCGAG | 1 cut(s) | 708 |
| XmiI | GTMKAC | 2 cut(s) | 563, 2521 |
| XmnI | GAANNNNTTC | 3 cut(s) | 813, 1083, 1515 |
| XspI | CTAG | 4 cut(s) | 104, 1394, 1845, 2525 |
| Zsp2I | ATGCAT | 2 cut(s) | 281, 1485 |