Rroxscaffold_4G00326980

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000105
Physical Location & Seq
Forward (+)
59348867 .. 59353059
4193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00326980.1

Sequence Viewer

Length: 1728 bp
ATGGAAATACGATGTGTTTCTAAGTTTCAGGGGGAAGATACCCGCCGGTTTTTTACTCGTTATCTGTTTTCTGCACTAAGTCAGAAAGGAATTCTCACCTTTATGGATGATGCAGAGCTTGAGAAAGGAAAATCCATTAGGCCTGAACTATTAGATGCAATTAAGGAGTCTAGATCTGCGATTGTCATTCTCTCAGAGAACTATGCTTCTTCGTCATGCTGGGCCAACAAGTCCTCCCCGTCAAGATTCTTCAGGGTGGATCCTTCTGATGTGCGGCACCAAAGGGGAAGGTTTGCGCTCAAAAGGGAACCGGAAGTAGAAATAAGGGAACATGAAGAAGTTTATGGGAAGAATGAGGACAGACTAAATGCGTGGAGAGATGCTTTGACACAGGTCGCCAATCTTTCTGGCTGGGATTCCAAGAATTCAATCAAAGGCATGGTAATGGAGTTGACTAAATTACAAGCGGCTCATTGGAAGCCAGAAGCCTTTTCAAATTTGTCTCAACTTAGTCTTCTTCATATTTGTAATGTGGACCTTCCCAAAGGCCTCACTTGTCTTTCTAATTCATTGAAACTCCTCGAATGGACTGGGTATCCCTTAAGATCTCTCCCACAAAATTTTGAAGCAGATGAACTTGTTGAACTTAACTTGTGCCACAGCAACATTAAACAACTTTGGAAGGGAACAAAGCCAATGAGTTTGCACATATCTGGTCTGTGTAATTTAACATATCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAACGAATTTGGTTACCTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTTGTTCGCATTCCTTCAGGCATTCGATTGCTTTCTAAGCTTGAGAACTTTAACTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCAGACCTTCCATCAAATAGTAGACTAGATTTAAGGGCAGATGGTTGTACTTCACTGAAATACTTGTTTGATGCATCAAATTTGAACAGACTAAATAGATCATATTTCAATTTCATCAATTGCTTCAATCTAAATGGCAATGAAGGATGCAATAACATAGCATTTGAAATGCTGAGGACACTCATGTATCAGGGAATCTCTAATAAGAGGGAAACTTTTCAAATTGTAATTCCTGGAAGTAATATTCCTGAGTGGTTCAGCCATCAGAGCGTTGGGTGTTCATTAAGTGTATCTCTACCTGTACATTGGAATAACAGTCGGTTTTTGGGATTTGCTTTGTGTGCTGTTTTTGTACTCCATGAGCACCATCGGGTGGATGAGCTTTATATAGATGAATTCAAGACTTTTAAGGCAACACATCATCTTGTATGTTGCCTGAAGCTCGATGGAAGAGAATTGGAAGTATATGGCAGACAGCCTGCATTTCGCTTTAGTGAGGAATTTTGCCAGGTTGAGTCAGATCACCTTTGGCTATTCTATGTATCTCGTGACAAATACTTTGGTACAGAGTGGTGGCATAACTGTTGCAGTCGGTTTGAGTTCTTATTTGAGACCAGAGGGCCGGGTCTGAAGGTGAAGCAGTGTGGAGTCCGTCTGATATATGAGCAAGATGTGCAAGAGTTGAACCAAACAACCACTCAATCAAGCAGTGGGATGTCTCCTTATGAGGATATATTGATTGGTTTTGACATTCCAGTTGCAGGGGAAACCAGTAGCACTGGTAGCAGAACTTGCACGCTTGAAGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

575

Amino Acids

65.85

Weight (kDa)

6.15

Isoelectric Point (pI)

41.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 7 - 74 2.8e-18 TIR domain
TIR_2 PF13676 11 - 73 2.2e-06 TIR domain
LRR_3 PF07725 213 - 231 1.4e-06 Leucine Rich Repeat
LRR_14 PF23598 236 - 363 6e-06 Leucine-rich repeat region
C-JID PF20160 382 - 531 2.4e-21 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 276
AccB7I CCANNNNNTGG 1 cut(s) 1288
AccI GTMKAC 1 cut(s) 937
AciI CCGC 3 cut(s) 43, 274, 467
AclWI GGATC 2 cut(s) 254, 267
AcsI RAATTY 8 cut(s) 90, 424, 496, 619, 782, 994, 1310, 1415
AcuI CTGAAG 4 cut(s) 235, 831, 1373, 1565
AfaI GTAC 4 cut(s) 964, 1218, 1269, 1480
AfiI CCNNNNNNNGG 2 cut(s) 1288, 1676
AflII CTTAAG 1 cut(s) 601
AjnI CCWGG 2 cut(s) 1147, 1422
AjuI GAANNNNNNNTTGG 2 cut(s) 869, 901
AluBI AGCT 4 cut(s) 118, 871, 1297, 1357
AluI AGCT 4 cut(s) 118, 871, 1297, 1357
Alw21I GWGCWC 1 cut(s) 1281
Alw26I GTCTC 4 cut(s) 507, 895, 1520, 1638
AlwI GGATC 2 cut(s) 254, 267
AoxI GGCC 4 cut(s) 140, 222, 547, 1535
ApoI RAATTY 8 cut(s) 90, 424, 496, 619, 782, 994, 1310, 1415
ArsI GACNNNNNNTTYG 2 cut(s) 1457, 1489
Asp700I GAANNNNTTC 1 cut(s) 1131
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 3 cut(s) 222, 535, 1535
AsuC2I CCSGG 1 cut(s) 1539
AsuHPI GGTGA 5 cut(s) 88, 773, 817, 1430, 1561
AvaII GGWCC 1 cut(s) 535
BaeI ACNNNNGTAYC 2 cut(s) 1085, 1118
BamHI GGATCC 1 cut(s) 259
BanI GGYRCC 1 cut(s) 276
BauI CACGAG 1 cut(s) 1461
BbsI GAAGAC 1 cut(s) 506
Bbv12I GWGCWC 1 cut(s) 1281
BbvCI CCTCAGC 1 cut(s) 1088
BccI CCATC 5 cut(s) 934, 950, 1185, 1290, 1355
BciT130I CCWGG 2 cut(s) 1149, 1424
BciVI GTATCC 1 cut(s) 606
BcnI CCSGG 1 cut(s) 1539
BcoDI GTCTC 4 cut(s) 507, 895, 1520, 1638
BfaI CTAG 2 cut(s) 171, 941
BfrI CTTAAG 1 cut(s) 601
BfuI GTATCC 1 cut(s) 606
BglII AGATCT 2 cut(s) 173, 605
BisI GCNGC 2 cut(s) 275, 468
BlsI GCNGC 2 cut(s) 276, 469
Bme1390I CCNGG 3 cut(s) 1149, 1424, 1539
Bme18I GGWCC 1 cut(s) 535
BmgT120I GGNCC 3 cut(s) 222, 535, 1535
BmiI GGNNCC 3 cut(s) 261, 278, 309
BmrFI CCNGG 3 cut(s) 1149, 1424, 1539
BmrI ACTGGG 1 cut(s) 600
BmsI GCATC 6 cut(s) 100, 145, 370, 976, 998, 1052
BmuI ACTGGG 1 cut(s) 600
BoxI GACNNNNGTC 1 cut(s) 392
BpiI GAAGAC 1 cut(s) 506
Bpu10I CCTNAGC 1 cut(s) 1088
BpuEI CTTGAG 2 cut(s) 140, 893
BpuMI CCSGG 1 cut(s) 1539
BsaI GGTCTC 1 cut(s) 1520
BsaWI WCCGGW 1 cut(s) 310
BsaXI ACNNNNNCTCC 2 cut(s) 218, 248
Bsc4I CCNNNNNNNGG 2 cut(s) 1288, 1676
Bse118I RCCGGY 1 cut(s) 45
Bse1I ACTGG 4 cut(s) 595, 1670, 1686, 1699
Bse3DI GCAATG 1 cut(s) 1060
BseBI CCWGG 2 cut(s) 1149, 1424
BseGI GGATG 4 cut(s) 112, 1067, 1297, 1635
BseLI CCNNNNNNNGG 2 cut(s) 1288, 1676
BseMI GCAATG 1 cut(s) 1060
BseMII CTCAG 4 cut(s) 207, 734, 1079, 1155
BseNI ACTGG 4 cut(s) 595, 1670, 1686, 1699
BseRI GAGGAG 1 cut(s) 569
BseYI CCCAGC 2 cut(s) 219, 411
BsgI GTGCAG 1 cut(s) 57
BshFI GGCC 4 cut(s) 142, 224, 549, 1537
BshNI GGYRCC 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 1281
BsiSI CCGG 3 cut(s) 46, 311, 1538
BslI CCNNNNNNNGG 2 cut(s) 1288, 1676
BsmAI GTCTC 4 cut(s) 507, 895, 1520, 1638
BsmI GAATGC 2 cut(s) 840, 852
BsnI GGCC 4 cut(s) 142, 224, 549, 1537
Bso31I GGTCTC 1 cut(s) 1520
Bsp1286I GDGCHC 1 cut(s) 1281
Bsp1407I TGTACA 1 cut(s) 1216
Bsp143I GATC 5 cut(s) 173, 259, 605, 1013, 1435
BspACI CCGC 3 cut(s) 43, 274, 467
BspANI GGCC 4 cut(s) 142, 224, 549, 1537
BspCNI CTCAG 4 cut(s) 206, 735, 1080, 1156
BspLI GGNNCC 3 cut(s) 261, 278, 309
BspPI GGATC 2 cut(s) 254, 267
BspT107I GGYRCC 1 cut(s) 276
BspTI CTTAAG 1 cut(s) 601
BspTNI GGTCTC 1 cut(s) 1520
BsrDI GCAATG 1 cut(s) 1060
BsrFI RCCGGY 1 cut(s) 45
BsrGI TGTACA 1 cut(s) 1216
BsrI ACTGG 4 cut(s) 595, 1670, 1686, 1699
BssAI RCCGGY 1 cut(s) 45
BssMI GATC 5 cut(s) 173, 259, 605, 1013, 1435
BssSI CACGAG 1 cut(s) 1461
Bst2BI CACGAG 1 cut(s) 1461
Bst2UI CCWGG 2 cut(s) 1149, 1424
Bst4CI ACNGT 2 cut(s) 1232, 1499
Bst6I CTCTTC 1 cut(s) 1360
BstAFI CTTAAG 1 cut(s) 601
BstAPI GCANNNNNTGC 2 cut(s) 1588, 1707
BstAUI TGTACA 1 cut(s) 1216
BstC8I GCNNGC 2 cut(s) 1395, 1712
BstDEI CTNAG 9 cut(s) 21, 77, 193, 509, 743, 818, 867, 1088, 1164
BstEII GGTNACC 2 cut(s) 788, 805
BstF5I GGATG 4 cut(s) 112, 1067, 1297, 1635
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 5 cut(s) 176, 262, 608, 1016, 1438
BstMAI GTCTC 4 cut(s) 507, 895, 1520, 1638
BstMBI GATC 5 cut(s) 173, 259, 605, 1013, 1435
BstMWI GCNNNNNNNGC 6 cut(s) 868, 1182, 1256, 1588, 1698, 1707
BstNI CCWGG 2 cut(s) 1149, 1424
BstPAI GACNNNNGTC 1 cut(s) 392
BstPI GGTNACC 2 cut(s) 788, 805
BstSCI CCNGG 3 cut(s) 1147, 1422, 1537
BstV2I GAAGAC 1 cut(s) 506
BstX2I RGATCY 3 cut(s) 173, 259, 605
BstYI RGATCY 3 cut(s) 173, 259, 605
BsuI GTATCC 1 cut(s) 606
BsuRI GGCC 4 cut(s) 142, 224, 549, 1537
BtsCI GGATG 4 cut(s) 112, 1067, 1297, 1635
BtsI GCAGTG 2 cut(s) 1562, 1630
BtsIMutI CAGTG 4 cut(s) 968, 1562, 1630, 1692
Cac8I GCNNGC 2 cut(s) 1395, 1712
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 45
Cfr13I GGNCC 3 cut(s) 222, 535, 1535
Csp6I GTAC 4 cut(s) 963, 1217, 1268, 1479
CviAII CATG 5 cut(s) 216, 332, 439, 1099, 1274
CviQI GTAC 4 cut(s) 963, 1217, 1268, 1479
DdeI CTNAG 9 cut(s) 21, 77, 193, 509, 743, 818, 867, 1088, 1164
DpnI GATC 5 cut(s) 175, 261, 607, 1015, 1437
DpnII GATC 5 cut(s) 173, 259, 605, 1013, 1435
Eam1104I CTCTTC 1 cut(s) 1360
EarI CTCTTC 1 cut(s) 1360
Eco147I AGGCCT 2 cut(s) 142, 549
Eco31I GGTCTC 1 cut(s) 1520
Eco47I GGWCC 1 cut(s) 535
Eco57I CTGAAG 4 cut(s) 235, 831, 1373, 1565
Eco91I GGTNACC 2 cut(s) 788, 805
EcoO65I GGTNACC 2 cut(s) 788, 805
EcoRI GAATTC 3 cut(s) 90, 424, 1310
EcoRII CCWGG 2 cut(s) 1147, 1422
EcoT22I ATGCAT 1 cut(s) 991
FaeI CATG 5 cut(s) 219, 335, 442, 1102, 1277
FatI CATG 5 cut(s) 215, 331, 438, 1098, 1273
FauI CCCGC 1 cut(s) 50
FblI GTMKAC 1 cut(s) 937
Fnu4HI GCNGC 2 cut(s) 275, 468
FokI GGATG 4 cut(s) 119, 1074, 1304, 1642
Fsp4HI GCNGC 2 cut(s) 275, 468
FspBI CTAG 2 cut(s) 171, 941
GlaI GCGC 1 cut(s) 297
GluI GCNGC 2 cut(s) 275, 468
GsaI CCCAGC 2 cut(s) 223, 415
HaeIII GGCC 4 cut(s) 142, 224, 549, 1537
HapII CCGG 3 cut(s) 46, 311, 1538
HhaI GCGC 1 cut(s) 298
Hin1II CATG 5 cut(s) 219, 335, 442, 1102, 1277
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HincII GTYRAC 1 cut(s) 453
HindII GTYRAC 1 cut(s) 453
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 7 cut(s) 167, 246, 416, 814, 1110, 1430, 1563
HpaII CCGG 3 cut(s) 46, 311, 1538
HphI GGTGA 5 cut(s) 88, 773, 817, 1430, 1561
Hpy166II GTNNAC 3 cut(s) 453, 535, 938
Hpy188I TCNGA 9 cut(s) 84, 196, 268, 738, 919, 1182, 1435, 1545, 1572
Hpy188III TCNNGA 6 cut(s) 171, 243, 908, 1163, 1315, 1463
Hpy8I GTNNAC 3 cut(s) 453, 535, 938
HpyCH4III ACNGT 2 cut(s) 1232, 1499
HpyF10VI GCNNNNNNNGC 6 cut(s) 868, 1182, 1256, 1588, 1698, 1707
HpyF3I CTNAG 9 cut(s) 21, 77, 193, 509, 743, 818, 867, 1088, 1164
Hsp92II CATG 5 cut(s) 219, 335, 442, 1102, 1277
HspAI GCGC 1 cut(s) 296
Kzo9I GATC 5 cut(s) 173, 259, 605, 1013, 1435
LmnI GCTCC 1 cut(s) 767
LweI GCATC 6 cut(s) 100, 145, 370, 976, 998, 1052
MaeI CTAG 2 cut(s) 171, 941
MaeIII GTNAC 3 cut(s) 788, 805, 1463
MalI GATC 5 cut(s) 175, 261, 607, 1015, 1437
MboI GATC 5 cut(s) 173, 259, 605, 1013, 1435
MboII GAAGA 8 cut(s) 47, 201, 241, 347, 361, 506, 509, 1377
MfeI CAATTG 1 cut(s) 1033
MflI RGATCY 3 cut(s) 173, 259, 605
MhlI GDGCHC 1 cut(s) 1281
MlyI GAGTC 3 cut(s) 176, 1439, 1572
Mph1103I ATGCAT 1 cut(s) 991
MroXI GAANNNNTTC 1 cut(s) 1131
MseI TTAA 9 cut(s) 162, 602, 648, 669, 728, 882, 947, 1199, 1323
MslI CAYNNNNRTG 2 cut(s) 101, 443
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 3 cut(s) 46, 311, 1538
MspR9I CCNGG 3 cut(s) 1149, 1424, 1539
MunI CAATTG 1 cut(s) 1033
Mva1269I GAATGC 2 cut(s) 840, 852
MvaI CCWGG 2 cut(s) 1149, 1424
MwoI GCNNNNNNNGC 6 cut(s) 868, 1182, 1256, 1588, 1698, 1707
NciI CCSGG 1 cut(s) 1539
NdeII GATC 5 cut(s) 173, 259, 605, 1013, 1435
NlaIII CATG 5 cut(s) 219, 335, 442, 1102, 1277
NlaIV GGNNCC 3 cut(s) 261, 278, 309
NmuCI GTSAC 2 cut(s) 805, 1463
NsiI ATGCAT 1 cut(s) 991
PceI AGGCCT 2 cut(s) 142, 549
PctI GAATGC 2 cut(s) 840, 852
PdmI GAANNNNTTC 1 cut(s) 1131
PfeI GAWTC 4 cut(s) 246, 416, 814, 1110
PflMI CCANNNNNTGG 1 cut(s) 1288
PfoI TCCNGGA 1 cut(s) 1147
PkrI GCNGC 2 cut(s) 276, 469
PleI GAGTC 3 cut(s) 175, 1438, 1571
PpsI GAGTC 3 cut(s) 175, 1438, 1571
PshAI GACNNNNGTC 1 cut(s) 392
Psp6I CCWGG 2 cut(s) 1147, 1422
PspEI GGTNACC 2 cut(s) 788, 805
PspFI CCCAGC 2 cut(s) 219, 411
PspGI CCWGG 2 cut(s) 1147, 1422
PspN4I GGNNCC 3 cut(s) 261, 278, 309
PspPI GGNCC 3 cut(s) 222, 535, 1535
PsuI RGATCY 3 cut(s) 173, 259, 605
RsaI GTAC 4 cut(s) 964, 1218, 1269, 1480
RsaNI GTAC 4 cut(s) 963, 1217, 1268, 1479
RseI CAYNNNNRTG 2 cut(s) 101, 443
SaqAI TTAA 9 cut(s) 162, 602, 648, 669, 728, 882, 947, 1199, 1323
SatI GCNGC 2 cut(s) 275, 468
Sau3AI GATC 5 cut(s) 173, 259, 605, 1013, 1435
Sau96I GGNCC 3 cut(s) 222, 535, 1535
SchI GAGTC 3 cut(s) 176, 1439, 1572
ScrFI CCNGG 3 cut(s) 1149, 1424, 1539
SduI GDGCHC 1 cut(s) 1281
SfaNI GCATC 6 cut(s) 100, 145, 370, 976, 998, 1052
SinI GGWCC 1 cut(s) 535
SmiMI CAYNNNNRTG 2 cut(s) 101, 443
SmlI CTYRAG 3 cut(s) 119, 601, 872
SmoI CTYRAG 3 cut(s) 119, 601, 872
SseBI AGGCCT 2 cut(s) 142, 549
SsiI CCGC 3 cut(s) 43, 274, 467
SspI AATATT 1 cut(s) 1159
SspMI CTAG 2 cut(s) 171, 941
StuI AGGCCT 2 cut(s) 142, 549
StyD4I CCNGG 3 cut(s) 1147, 1422, 1537
TaaI ACNGT 2 cut(s) 1232, 1499
TaqI TCGA 3 cut(s) 582, 856, 1359
TatI WGTACW 3 cut(s) 962, 1216, 1267
TauI GCSGC 2 cut(s) 277, 470
TfiI GAWTC 4 cut(s) 246, 416, 814, 1110
Tru1I TTAA 9 cut(s) 162, 602, 648, 669, 728, 882, 947, 1199, 1323
Tru9I TTAA 9 cut(s) 162, 602, 648, 669, 728, 882, 947, 1199, 1323
TscAI CASTG 4 cut(s) 975, 1562, 1630, 1699
TseFI GTSAC 2 cut(s) 805, 1463
Tsp45I GTSAC 2 cut(s) 805, 1463
TspDTI ATGAA 8 cut(s) 348, 509, 558, 648, 1018, 1071, 1185, 1323
TspGWI ACGGA 1 cut(s) 1556
TspRI CASTG 4 cut(s) 975, 1562, 1630, 1699
Van91I CCANNNNNTGG 1 cut(s) 1288
Vha464I CTTAAG 1 cut(s) 601
VpaK11BI GGWCC 1 cut(s) 535
XapI RAATTY 8 cut(s) 90, 424, 496, 619, 782, 994, 1310, 1415
XbaI TCTAGA 1 cut(s) 170
XcmI CCANNNNNNNNNTGG 1 cut(s) 1184
XmiI GTMKAC 1 cut(s) 937
XmnI GAANNNNTTC 1 cut(s) 1131
XspI CTAG 2 cut(s) 171, 941
Zsp2I ATGCAT 1 cut(s) 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.