Rmu_sc0004368.1_g000032

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004368.1
OG0000105
Physical Location & Seq
Forward (+)
135672 .. 140055
4384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004368.1_g000032.1.cds

Sequence Viewer

Length: 3330 bp
atggcgatgattcaagatatattgatgagggaccgcaagaaccacgtagaaagactgcggcgcgaagggcggccacgtgatcagcatctaattcagcaggggttgatgacgcatcatggggtacaacgtgatctactgcagcggttgaagccgccgctacttcctgcggtgtcgccgagaaggaagtacgatgtgtttctaagtttcagagggccagatacgcgcaaggggattacctccgagctgtatgatagactagaacggagaggaattaaaacctttatggatgaccccgatcttcgtgtaggagattccattagcctgtctcttgtttcagcaattgaggagtcaagatttgccattgtcattctttcacccaactatgcttcttcgtcatggtgcttggaagaactggtcaagattattcaatgcatgaaagagaaggggctacaagtcatgcccgtgttctacaaggtggagccttctgatgtgcggcaccaaaggggaagttttgagctcaaagggaaaacccgaccccgagtagaagtaagggaacatgaagaagtttatggcaaggaggaggacaaattcaaggcgtggagagctactttgacagaggtagccaatctttctgggtgggattcaaagaattttagaactgagagagaacttgttgaggcaattgtcggggatattgggagtaaggcggtgtataaatcttcaagtgttgacaagggcttcgtaggaatggatgtccgtgttgatgttttattacataattgcatacatcaagagttggatgaggtacgaataatagggatacatgggatgcgaggagttggtaagacaacgcttgctcgagctttttacgatgacttttgtcacgatttcgagcagagatgctttcttttcaatgttagagaaaagtttaaaagggatggcctagtttctttacaaaagaacctgctttccagcatgttcatggacaaaactgatttcatagaggatgaatatacaggagctgctatgattcaaaggagtttacgtaacagaaaggtgcttgttgttattgatgatgtggatcggttggaacaattagaaaaattggctggaagtcccaactggttcggtccagggagcagaattatcataaccaccacagattttcacttgttagaggtacatggtgttgatgctacatacaatgctaccgggttaagttctgatgaagctcttgaactcttgagtttaaaggctttcaagaaaatgcccccaccagaaaattatttggacctgtgctaccatattttagagtatgctcaggggctgccgttagctcttgtggttataggttcttttctatgtggtagaagcaccaatgaatgggcaagtgcaattgataggctaaaaaatacaccaaatagaggaattatggatgtgcttcagattagttttgatggactagaggacatagacaaagaaatattcctacatattgcttgtttttacaaggggaaagataggaatcgtgtgacacaaatactagactattgtgagctgaaccctgtcattggattaagagtccttgctgataaatctctcattactatttccagcaacgaactgtcaatgcatgatttgctacaagaaatgggctgggaaatagttcgtcgacagtctcctaaagagccaggcaaacgtagtatattatggtctattgaagacatccataatgtgttgaagaaaaataagaattttgacaagttgaagttcatcaaactctgccattctcaaaacattgtggagaccccagacctcgcaagcgttcagaatcttgagagtttagatcttgaaggatgtaagagtttggtaagaatccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaagtcttgagaatctgccaggtagaattgaaatggattctcttgaaatattaattctgtctaactgctcaaagattaaaaagattcccgagtttgatggaaatatggagcgtctgtctgtgctttctctcgatgagactgccattgagaaactgcctgtttcaattggatgcctgagtggccttgtgtcattgaatctaagaaactgcacaaatcttgtttgtcttccatgcaccatcaataatttgaagtttgttgaaattcttaatctttctgggtgcataaaacttggtaaacaggtaaaagtgggggagatggactgttatgaggaaaatgatgtgaatagtgggtctgcaatagaaatgctcataaagtatgtgagaggttcaatcgttcgtggacgcgaagtagttttgggatctttacgcttgattggaacatttcccaacgaatttggttacttttcctctttggtgaccttgaatctaagtggaaacaattttgttcgtcttccttcgggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtagcctagatttaagggcagatggttgtagttcactgaaatacttgtttgatgcatcaaacttgaacagattaaacaaatcatattttaatttcatcaattgcgtcaatataaatggcaatcaagtatgcaataacatagcatttgaaatgctgaatacattcatgtatcagggaatctctgttaagagggaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcgaagtgctgggtgttcattaagtgtggagctgcctccagattgggatagcagtaggtttatgggatttgctctgtgtgttgtttttgtactccatgagcaccatcaggttgatgagcttgatattcatcaattcaagaattttaacgctactcatcatcttgtatgttgcctgaagctcaatggaagagaattagaagtatactgcagacagcctgcatttcgcttcagtgaagagttttgccagcttaactcagatcacctgtggctattctatgtatctcgtgataagtactttggtacagagtggtggcataacagttgcagtcagcttgatttcttatttgaaaccagagggccaggtctgaaggtgaaagagtgtggagtccgtcagatatatgagctagatgtgcaagagttgaaccaaacaaccactcaatcaagcagtaggatgtctccatatgaggacatattggttgattttgatattccagttgaaggggaaaccagtggccctggtagcagaacttgcagacttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1109

Amino Acids

126.52

Weight (kDa)

6.1

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 972
AccB1I GGYRCC 1 cut(s) 495
AccB7I CCANNNNNTGG 1 cut(s) 1383
AccI GTMKAC 2 cut(s) 1672, 2982
AccII CGCG 3 cut(s) 63, 223, 2337
AciI CCGC 9 cut(s) 34, 58, 70, 142, 152, 155, 167, 493, 707
AclWI GGATC 2 cut(s) 1089, 2359
AcoI YGGCCR 1 cut(s) 71
AcsI RAATTY 6 cut(s) 587, 649, 1753, 2193, 2384, 2920
AcuI CTGAAG 4 cut(s) 1427, 2975, 2992, 3167
AcvI CACGTG 1 cut(s) 77
AfaI GTAC 7 cut(s) 123, 188, 807, 1182, 2871, 3074, 3082
AfiI CCNNNNNNNGG 4 cut(s) 1383, 1424, 1571, 3278
AjnI CCWGG 6 cut(s) 1132, 1690, 1951, 2749, 3139, 3295
AjuI GAANNNNNNNTTGG 2 cut(s) 2471, 2503
AloI GAACNNNNNNTCC 2 cut(s) 953, 985
Alw21I GWGCWC 2 cut(s) 519, 2883
Alw26I GTCTC 6 cut(s) 330, 1683, 1799, 2063, 2497, 3240
AlwI GGATC 2 cut(s) 1089, 2359
AlwNI CAGNNNCTG 2 cut(s) 1022, 1327
Ama87I CYCGRG 3 cut(s) 537, 858, 2021
AoxI GGCC 6 cut(s) 71, 212, 940, 2113, 3137, 3292
ApeKI GCWGC 4 cut(s) 139, 1022, 1327, 2812
ApoI RAATTY 6 cut(s) 587, 649, 1753, 2193, 2384, 2920
ArsI GACNNNNNNTTYG 2 cut(s) 722, 754
AseI ATTAAT 1 cut(s) 1985
Asp700I GAANNNNTTC 3 cut(s) 1665, 2696, 2733
AspLEI GCGC 2 cut(s) 63, 225
AspS9I GGNCC 6 cut(s) 31, 212, 1130, 1291, 3137, 3293
AsuC2I CCSGG 1 cut(s) 1213
AsuHPI GGTGA 4 cut(s) 366, 2419, 3032, 3163
AvaI CYCGRG 3 cut(s) 537, 858, 2021
AvaII GGWCC 3 cut(s) 31, 1130, 1291
BanI GGYRCC 1 cut(s) 495
BanII GRGCYC 1 cut(s) 519
BauI CACGAG 1 cut(s) 3063
BbrPI CACGTG 1 cut(s) 77
BbsI GAAGAC 3 cut(s) 1728, 2150, 2435
Bbv12I GWGCWC 2 cut(s) 519, 2883
BbvI GCAGC 4 cut(s) 151, 1009, 1314, 2799
BceAI ACGGC 1 cut(s) 1315
BcgI CGANNNNNNTGC 2 cut(s) 2054, 2088
BciT130I CCWGG 6 cut(s) 1134, 1692, 1953, 2751, 3141, 3297
BciVI GTATCC 1 cut(s) 813
BclI TGATCA 1 cut(s) 79
BcnI CCSGG 1 cut(s) 1213
BcoDI GTCTC 6 cut(s) 330, 1683, 1799, 2063, 2497, 3240
BfaI CTAG 6 cut(s) 257, 944, 1463, 1544, 2543, 3185
BfmI CTRYAG 2 cut(s) 137, 2986
BfuAI ACCTGC 1 cut(s) 972
BfuI GTATCC 1 cut(s) 813
BglI GCCNNNNNGGC 1 cut(s) 2112
BglII AGATCT 1 cut(s) 1846
BisI GCNGC 9 cut(s) 59, 71, 140, 152, 155, 494, 1023, 1328, 2813
BlsI GCNGC 9 cut(s) 60, 72, 141, 153, 156, 495, 1024, 1329, 2814
BmcAI AGTACT 1 cut(s) 3074
Bme1390I CCNGG 7 cut(s) 1134, 1213, 1692, 1953, 2751, 3141, 3297
Bme18I GGWCC 3 cut(s) 31, 1130, 1291
BmeT110I CYCGRG 3 cut(s) 537, 858, 2021
BmgT120I GGNCC 6 cut(s) 31, 212, 1130, 1291, 3137, 3293
BmiI GGNNCC 3 cut(s) 32, 480, 497
BmrFI CCNGG 7 cut(s) 1134, 1213, 1692, 1953, 2751, 3141, 3297
BmsI GCATC 8 cut(s) 94, 121, 819, 890, 1183, 2093, 2578, 2600
BoxI GACNNNNGTC 1 cut(s) 879
BpiI GAAGAC 3 cut(s) 1728, 2150, 2435
BpmI CTGGAG 1 cut(s) 2802
Bpu10I CCTNAGC 1 cut(s) 1320
BpuEI CTTGAG 4 cut(s) 1264, 1856, 1961, 2495
BpuMI CCSGG 1 cut(s) 1213
BsaAI YACGTR 3 cut(s) 46, 77, 1046
BsaBI GATNNNNATC 4 cut(s) 84, 1080, 1524, 2907
BsaI GGTCTC 1 cut(s) 1799
BsaJI CCNNGG 3 cut(s) 1133, 1888, 3295
BsaXI ACNNNNNCTCC 4 cut(s) 1030, 1060, 2033, 2063
Bsc4I CCNNNNNNNGG 4 cut(s) 1383, 1424, 1571, 3278
Bse1I ACTGG 4 cut(s) 417, 1127, 3272, 3288
Bse8I GATNNNNATC 4 cut(s) 84, 1080, 1524, 2907
BseBI CCWGG 6 cut(s) 1134, 1692, 1953, 2751, 3141, 3297
BseDI CCNNGG 3 cut(s) 1133, 1888, 3295
BseJI GATNNNNATC 4 cut(s) 84, 1080, 1524, 2907
BseLI CCNNNNNNNGG 4 cut(s) 1383, 1424, 1571, 3278
BseMII CTCAG 5 cut(s) 651, 1334, 2099, 2757, 3048
BseNI ACTGG 4 cut(s) 417, 1127, 3272, 3288
BseRI GAGGAG 3 cut(s) 359, 593, 849
BseXI GCAGC 4 cut(s) 151, 1009, 1314, 2799
BseYI CCCAGC 2 cut(s) 1656, 2789
BsgI GTGCAG 1 cut(s) 2125
Bsh1236I CGCG 3 cut(s) 63, 223, 2337
BshFI GGCC 6 cut(s) 73, 214, 942, 2115, 3139, 3294
BshNI GGYRCC 1 cut(s) 495
BsiHKAI GWGCWC 2 cut(s) 519, 2883
BsiHKCI CYCGRG 3 cut(s) 537, 858, 2021
BsiSI CCGG 1 cut(s) 1212
BslFI GGGAC 2 cut(s) 44, 1101
BslI CCNNNNNNNGG 4 cut(s) 1383, 1424, 1571, 3278
BsmAI GTCTC 6 cut(s) 330, 1683, 1799, 2063, 2497, 3240
BsmFI GGGAC 2 cut(s) 44, 1101
BsnI GGCC 6 cut(s) 73, 214, 942, 2115, 3139, 3294
Bso31I GGTCTC 1 cut(s) 1799
BsoBI CYCGRG 3 cut(s) 537, 858, 2021
Bsp1286I GDGCHC 2 cut(s) 519, 2883
Bsp143I GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
BspACI CCGC 9 cut(s) 34, 58, 70, 142, 152, 155, 167, 493, 707
BspANI GGCC 6 cut(s) 73, 214, 942, 2115, 3139, 3294
BspCNI CTCAG 5 cut(s) 652, 1333, 2100, 2758, 3047
BspFNI CGCG 3 cut(s) 63, 223, 2337
BspLI GGNNCC 3 cut(s) 32, 480, 497
BspMAI CTGCAG 2 cut(s) 141, 2990
BspMI ACCTGC 1 cut(s) 972
BspPI GGATC 2 cut(s) 1089, 2359
BspT107I GGYRCC 1 cut(s) 495
BspTNI GGTCTC 1 cut(s) 1799
BsrI ACTGG 4 cut(s) 417, 1127, 3272, 3288
BssECI CCNNGG 3 cut(s) 1133, 1888, 3295
BssMI GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
BssNAI GTATAC 1 cut(s) 2983
BssSI CACGAG 1 cut(s) 3063
BssT1I CCWWGG 1 cut(s) 1888
Bst1107I GTATAC 1 cut(s) 2983
Bst2BI CACGAG 1 cut(s) 3063
Bst2UI CCWGG 6 cut(s) 1134, 1692, 1953, 2751, 3141, 3297
Bst4CI ACNGT 4 cut(s) 1626, 1677, 2255, 3101
Bst6I CTCTTC 2 cut(s) 2962, 3009
BstAPI GCANNNNNTGC 2 cut(s) 1639, 3309
BstBAI YACGTR 3 cut(s) 46, 77, 1046
BstC8I GCNNGC 4 cut(s) 855, 1822, 2997, 3026
BstDEI CTNAG 9 cut(s) 200, 660, 1320, 2108, 2132, 2420, 2469, 2766, 3034
BstEII GGTNACC 1 cut(s) 2407
BstFNI CGCG 3 cut(s) 63, 223, 2337
BstHHI GCGC 2 cut(s) 63, 225
BstKTI GATC 7 cut(s) 82, 133, 298, 1084, 1849, 2354, 3040
BstMAI GTCTC 6 cut(s) 330, 1683, 1799, 2063, 2497, 3240
BstMBI GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
BstNI CCWGG 6 cut(s) 1134, 1692, 1953, 2751, 3141, 3297
BstNSI RCATGY 1 cut(s) 979
BstPAI GACNNNNGTC 1 cut(s) 879
BstPI GGTNACC 1 cut(s) 2407
BstSCI CCNGG 7 cut(s) 1132, 1211, 1690, 1951, 2749, 3139, 3295
BstSFI CTRYAG 2 cut(s) 137, 2986
BstSNI TACGTA 1 cut(s) 1046
BstUI CGCG 3 cut(s) 63, 223, 2337
BstV1I GCAGC 4 cut(s) 151, 1009, 1314, 2799
BstV2I GAAGAC 3 cut(s) 1728, 2150, 2435
BstX2I RGATCY 2 cut(s) 1846, 2351
BstYI RGATCY 2 cut(s) 1846, 2351
BstZ17I GTATAC 1 cut(s) 2983
BsuI GTATCC 1 cut(s) 813
BsuRI GGCC 6 cut(s) 73, 214, 942, 2115, 3139, 3294
BtgZI GCGATG 1 cut(s) 20
BtsIMutI CAGTG 3 cut(s) 2570, 3016, 3295
BveI ACCTGC 1 cut(s) 972
Cac8I GCNNGC 4 cut(s) 855, 1822, 2997, 3026
CaiI CAGNNNCTG 2 cut(s) 1022, 1327
CfoI GCGC 2 cut(s) 63, 225
Cfr13I GGNCC 6 cut(s) 31, 212, 1130, 1291, 3137, 3293
CseI GACGC 4 cut(s) 118, 2033, 2343, 2629
Csp6I GTAC 7 cut(s) 122, 187, 806, 1181, 2870, 3073, 3081
CviQI GTAC 7 cut(s) 122, 187, 806, 1181, 2870, 3073, 3081
DdeI CTNAG 9 cut(s) 200, 660, 1320, 2108, 2132, 2420, 2469, 2766, 3034
DpnI GATC 7 cut(s) 81, 132, 297, 1083, 1848, 2353, 3039
DpnII GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
DraI TTTAAA 2 cut(s) 931, 1251
EaeI YGGCCR 1 cut(s) 71
Eam1104I CTCTTC 2 cut(s) 2962, 3009
EarI CTCTTC 2 cut(s) 2962, 3009
Ecl136II GAGCTC 1 cut(s) 517
Eco105I TACGTA 1 cut(s) 1046
Eco130I CCWWGG 1 cut(s) 1888
Eco24I GRGCYC 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 1799
Eco47I GGWCC 3 cut(s) 31, 1130, 1291
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 4 cut(s) 1427, 2975, 2992, 3167
Eco72I CACGTG 1 cut(s) 77
Eco88I CYCGRG 3 cut(s) 537, 858, 2021
Eco91I GGTNACC 1 cut(s) 2407
EcoICRI GAGCTC 1 cut(s) 517
EcoO65I GGTNACC 1 cut(s) 2407
EcoRII CCWGG 6 cut(s) 1132, 1690, 1951, 2749, 3139, 3295
EcoT14I CCWWGG 1 cut(s) 1888
EcoT22I ATGCAT 3 cut(s) 434, 1635, 2593
EcoT38I GRGCYC 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 1888
FaqI GGGAC 2 cut(s) 44, 1101
FauNDI CATATG 1 cut(s) 3241
FbaI TGATCA 1 cut(s) 79
FblI GTMKAC 2 cut(s) 1672, 2982
Fnu4HI GCNGC 9 cut(s) 59, 71, 140, 152, 155, 494, 1023, 1328, 2813
FriOI GRGCYC 1 cut(s) 519
Fsp4HI GCNGC 9 cut(s) 59, 71, 140, 152, 155, 494, 1023, 1328, 2813
FspBI CTAG 6 cut(s) 257, 944, 1463, 1544, 2543, 3185
GlaI GCGC 2 cut(s) 62, 224
GluI GCNGC 9 cut(s) 59, 71, 140, 152, 155, 494, 1023, 1328, 2813
GsaI CCCAGC 2 cut(s) 1660, 2793
GsuI CTGGAG 1 cut(s) 2802
HaeIII GGCC 6 cut(s) 73, 214, 942, 2115, 3139, 3294
HapII CCGG 1 cut(s) 1212
HgaI GACGC 4 cut(s) 118, 2033, 2343, 2629
HhaI GCGC 2 cut(s) 63, 225
Hin6I GCGC 2 cut(s) 61, 223
HinP1I GCGC 2 cut(s) 61, 223
HincII GTYRAC 2 cut(s) 730, 1673
HindII GTYRAC 2 cut(s) 730, 1673
HindIII AAGCTT 2 cut(s) 1904, 2471
HpaII CCGG 1 cut(s) 1212
HphI GGTGA 4 cut(s) 366, 2419, 3032, 3163
Hpy166II GTNNAC 7 cut(s) 730, 1043, 1673, 2228, 2333, 2570, 2983
Hpy8I GTNNAC 7 cut(s) 730, 1043, 1673, 2228, 2333, 2570, 2983
Hpy99I CGWCG 1 cut(s) 1674
HpyAV CCTTC 9 cut(s) 59, 174, 436, 492, 1847, 2457, 2534, 3142, 3272
HpyCH4III ACNGT 4 cut(s) 1626, 1677, 2255, 3101
HpyCH4IV ACGT 5 cut(s) 45, 76, 127, 1045, 1699
HpyF3I CTNAG 9 cut(s) 200, 660, 1320, 2108, 2132, 2420, 2469, 2766, 3034
HpySE526I ACGT 5 cut(s) 45, 76, 127, 1045, 1699
HspAI GCGC 2 cut(s) 61, 223
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
LmnI GCTCC 5 cut(s) 478, 1019, 1137, 2041, 2809
Lsp1109I GCAGC 4 cut(s) 151, 1009, 1314, 2799
LweI GCATC 8 cut(s) 94, 121, 819, 890, 1183, 2093, 2578, 2600
MaeI CTAG 6 cut(s) 257, 944, 1463, 1544, 2543, 3185
MaeII ACGT 5 cut(s) 45, 76, 127, 1045, 1699
MaeIII GTNAC 5 cut(s) 881, 1046, 1531, 2390, 2407
MalI GATC 7 cut(s) 81, 132, 297, 1083, 1848, 2353, 3039
MboI GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
MfeI CAATTG 5 cut(s) 339, 681, 1395, 2097, 2635
MflI RGATCY 2 cut(s) 1846, 2351
MhlI GDGCHC 2 cut(s) 519, 2883
MlyI GAGTC 3 cut(s) 356, 1590, 3174
MmeI TCCRAC 2 cut(s) 777, 1068
Mph1103I ATGCAT 3 cut(s) 434, 1635, 2593
MroXI GAANNNNTTC 3 cut(s) 1665, 2696, 2733
MslI CAYNNNNRTG 3 cut(s) 461, 980, 2784
MspA1I CMGCKG 1 cut(s) 142
MspI CCGG 1 cut(s) 1212
MspR9I CCNGG 7 cut(s) 1134, 1213, 1692, 1953, 2751, 3141, 3297
MunI CAATTG 5 cut(s) 339, 681, 1395, 2097, 2635
MvaI CCWGG 6 cut(s) 1134, 1692, 1953, 2751, 3141, 3297
MvnI CGCG 3 cut(s) 63, 223, 2337
NciI CCSGG 1 cut(s) 1213
NdeI CATATG 1 cut(s) 3241
NdeII GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
NlaIV GGNNCC 3 cut(s) 32, 480, 497
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 3 cut(s) 881, 1531, 2407
NsiI ATGCAT 3 cut(s) 434, 1635, 2593
NspI RCATGY 1 cut(s) 979
PaeR7I CTCGAG 1 cut(s) 858
PdmI GAANNNNTTC 3 cut(s) 1665, 2696, 2733
PflMI CCANNNNNTGG 1 cut(s) 1383
PfoI TCCNGGA 1 cut(s) 2749
PkrI GCNGC 9 cut(s) 60, 72, 141, 153, 156, 495, 1024, 1329, 2814
PleI GAGTC 3 cut(s) 355, 1589, 3173
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
PpsI GAGTC 3 cut(s) 355, 1589, 3173
Ppu21I YACGTR 3 cut(s) 46, 77, 1046
PshAI GACNNNNGTC 1 cut(s) 879
PshBI ATTAAT 1 cut(s) 1985
Psp124BI GAGCTC 1 cut(s) 519
Psp6I CCWGG 6 cut(s) 1132, 1690, 1951, 2749, 3139, 3295
PspCI CACGTG 1 cut(s) 77
PspEI GGTNACC 1 cut(s) 2407
PspFI CCCAGC 2 cut(s) 1656, 2789
PspGI CCWGG 6 cut(s) 1132, 1690, 1951, 2749, 3139, 3295
PspN4I GGNNCC 3 cut(s) 32, 480, 497
PspPI GGNCC 6 cut(s) 31, 212, 1130, 1291, 3137, 3293
PspXI VCTCGAGB 1 cut(s) 858
PstI CTGCAG 2 cut(s) 141, 2990
PstNI CAGNNNCTG 2 cut(s) 1022, 1327
PsuI RGATCY 2 cut(s) 1846, 2351
RsaI GTAC 7 cut(s) 123, 188, 807, 1182, 2871, 3074, 3082
RsaNI GTAC 7 cut(s) 122, 187, 806, 1181, 2870, 3073, 3081
RseI CAYNNNNRTG 3 cut(s) 461, 980, 2784
SacI GAGCTC 1 cut(s) 519
SalI GTCGAC 1 cut(s) 1671
SatI GCNGC 9 cut(s) 59, 71, 140, 152, 155, 494, 1023, 1328, 2813
Sau3AI GATC 7 cut(s) 79, 130, 295, 1081, 1846, 2351, 3037
Sau96I GGNCC 6 cut(s) 31, 212, 1130, 1291, 3137, 3293
ScaI AGTACT 1 cut(s) 3074
SchI GAGTC 3 cut(s) 356, 1590, 3174
ScrFI CCNGG 7 cut(s) 1134, 1213, 1692, 1953, 2751, 3141, 3297
SduI GDGCHC 2 cut(s) 519, 2883
SfaNI GCATC 8 cut(s) 94, 121, 819, 890, 1183, 2093, 2578, 2600
SfcI CTRYAG 2 cut(s) 137, 2986
Sfr274I CTCGAG 1 cut(s) 858
SinI GGWCC 3 cut(s) 31, 1130, 1291
SlaI CTCGAG 1 cut(s) 858
SmiMI CAYNNNNRTG 3 cut(s) 461, 980, 2784
SmlI CTYRAG 5 cut(s) 858, 1243, 1835, 1940, 2474
SmoI CTYRAG 5 cut(s) 858, 1243, 1835, 1940, 2474
SnaBI TACGTA 1 cut(s) 1046
SsiI CCGC 9 cut(s) 34, 58, 70, 142, 152, 155, 167, 493, 707
SspI AATATT 3 cut(s) 1485, 1983, 2761
SspMI CTAG 6 cut(s) 257, 944, 1463, 1544, 2543, 3185
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 7 cut(s) 1132, 1211, 1690, 1951, 2749, 3139, 3295
StyI CCWWGG 1 cut(s) 1888
TaaI ACNGT 4 cut(s) 1626, 1677, 2255, 3101
TaiI ACGT 5 cut(s) 48, 79, 130, 1048, 1702
TaqI TCGA 5 cut(s) 859, 891, 1672, 2064, 2782
TaqII GACCGA 1 cut(s) 1118
TatI WGTACW 2 cut(s) 2869, 3072
TauI GCSGC 5 cut(s) 61, 73, 154, 157, 496
TscAI CASTG 3 cut(s) 2577, 3016, 3295
TseFI GTSAC 3 cut(s) 881, 1531, 2407
TseI GCWGC 4 cut(s) 139, 1022, 1327, 2812
Tsp45I GTSAC 3 cut(s) 881, 1531, 2407
TspGWI ACGGA 3 cut(s) 277, 746, 3158
TspRI CASTG 3 cut(s) 2577, 3016, 3295
Van91I CCANNNNNTGG 1 cut(s) 1383
VpaK11BI GGWCC 3 cut(s) 31, 1130, 1291
VspI ATTAAT 1 cut(s) 1985
XapI RAATTY 6 cut(s) 587, 649, 1753, 2193, 2384, 2920
XceI RCATGY 1 cut(s) 979
XcmI CCANNNNNNNNNTGG 3 cut(s) 979, 1886, 2786
XhoI CTCGAG 1 cut(s) 858
XmiI GTMKAC 2 cut(s) 1672, 2982
XmnI GAANNNNTTC 3 cut(s) 1665, 2696, 2733
XspI CTAG 6 cut(s) 257, 944, 1463, 1544, 2543, 3185
ZrmI AGTACT 1 cut(s) 3074
Zsp2I ATGCAT 3 cut(s) 434, 1635, 2593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.