Rmu_sc0002132.1_g000031

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002132.1
OG0000105
Physical Location & Seq
Forward (+)
129641 .. 133905
4265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002132.1_g000031.1.cds

Sequence Viewer

Length: 3612 bp
atggcgtcaacctcttctcgtcgtcaatggaaatacgatgtgtttataagtttcagcggggaagatacccgcaatacttttaccaattttctgtattctgcactaaatctgagaggaattctcacctttctggatgaccgagagcttgagaaaggaaaatccattagctctgaacttttagctgcaattgagcagtctagatctgcgattgtcattctctcacccaactatgctcgttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagacatgggccagcaagtcctccccgtcttcttgtgggtggatccttctgatgtgcggcaccaaaggggaagttttgagcccaaaaggaaaacccaagtaggtgtggaagtaagggaacatgaagaagtttatgggaagactgaggacagactaaatgcgtggagagctgctttgactgaggtcgccaatctttctggttgggattccaagaattatacatatgaagcaagactaattgacgaaattgttaatcatatactaaagaagtccgcgtatacatcttcaagtgttttcaagggcttaataggaatggattcccgcattcatgatttattaggcaattacatatgtccgcaccttcgtagggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctcgagctatccatgatcaaattcgccaggattttgaccgagcctactttctttccaatgttagagaaatgtctaaaaacaacggcctagtttctcttcaagaaaaacttctttccgaaatcctaatggcaaaaattaaaaatatagagcatgaagacacaggagctgctatgattaaaaggcggttctgcagaacaaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtccagggagcagaatcatcataaccaccacagatattcagttgttaaaggcacatgatgttgatgctacatacaaggctaacgggttaaactgtggtgaagcacttcaacttttgagtttgagggcttttaagaaatgtcccccaccagaagattatttggatctgtgctaccatattctagggtatgctcaggggcttccattggctctcgtggttttaggttcttttctatttggtagaagcgctgataaatgggcaagtgcaatggataggctaaagaacacaccagacaaacgcattattgaggtgcttcggattagttttgatggactggatgaaaaagaccaagaaatattcctacatattgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactagactattgccagctagaccctgtcattggtttagatgtacttgctgatagatctctcataactatctccaacaacaaactgtcgatgcatgatttgctacaagaattgggctgggaaattgttcgtgaacagtctcctaaacagccaggcaaacgtagtagattatggtctcatgaagacataaacaatgtgctgaagaaaaataagggaacagattcaatccaaggcatggtaatggagtcgactaaattacaagtggctcattggaagccagaagccttttcaaatatgtctcaacttagtctgctccatattcgtaatgtggaccttcccaaaggcctcacctgtctttctaattccttgagacttcttgaatggactgggtgtcccttaagatctctcccacaaaactttgaagccgatgaacttgttgaacttaacttgtgccacagcaacattgaacagctttggaagggaacaaagatttttgacaagttgaagttcatcaaactctgccattctcaaaaaattgtggagaccccagacctcgcaggtgttcagaatcttgagactttagatcttgaaggatgttctcatttggtaagaatccatcaatccctgggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaagtctcgagagtctgccaagtagaattgaaatggaatctcttgaaacattaattttttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgtcggtgctttatcttgatgagactgccattgaggaactgccagtgtcaattgaacggctgagcagccttgtgtcattaaatctgagcaactgcagaaatcttgtctatcttccaagtaccatcaataaattgaagtctattaaagatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtggcggtgatggactgttttgaggaaactgatgtgaatagtgggtctgcaatagaaatgtcgtctacccatgatcgcaggaaaaaagggagaggtccaatcgttcaaggatgcaaagtagtttggcgatctttaaaaaagttcttgccttctggatcggtgcaaaaagtgaatacggagccaaagagtttcctcttgcctatatcacaaaaagtgaatacagagccaatgagtttctgcttgcctatttctggtctgtgtaatttaacatatttgaacttgagtaattgcaatcttggtgaaggtgcatttgccaacgaatttggtcactttccctctttggtgatcttgaatctaagtggaaacaattttgttcgtcttccttctggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtagactagatttaagggcagatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagactaaatagatcatatttcaatttcatcaattgcttcaatctaaatggcaatgaaggatgcaataacatagcatttgaaatgctgaggacactcatgtatcagggaatctctaataagagggaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcagagtgttgggtgttcattaagtgtatctctacctgcacattggaataagagtcggtttttgggatttgctttgtgtgttgtttttgtactccatgagcaccatccggtggatgagctttatattgatgaattcaagacttttaatgcaacgcatcatcttatatgttgcctgaagctcgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgcaaagttgaatcagatcacttgtggctattctatgtatcttgtgataaatactttggtacagagtggtggcataatagttgcagtcagcttcagttcttatttgaaacccgagggccatgtggagttcgtctgatatatgagcaagatgtgcaagagttgaaccaaacaaccactcaatcaagcagtaggatgtcttcttatgaggatatattgattggttttgacattccaattgcaagggaaaccaccggtgctggtagcagaacttgcaggcttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1203

Amino Acids

136.69

Weight (kDa)

7.3

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 47
AarI CACCTGC 1 cut(s) 1934
Acc36I ACCTGC 2 cut(s) 1934, 3124
AccB1I GGYRCC 1 cut(s) 342
AccB7I CCANNNNNTGG 2 cut(s) 1621, 3190
AccI GTMKAC 4 cut(s) 560, 1634, 2429, 2839
AccII CGCG 1 cut(s) 557
AciI CCGC 9 cut(s) 57, 70, 340, 555, 604, 638, 679, 886, 2369
AclI AACGTT 1 cut(s) 2167
AclWI GGATC 8 cut(s) 320, 333, 661, 674, 936, 1146, 1380, 2527
AcsI RAATTY 6 cut(s) 117, 723, 2684, 2896, 3212, 3317
AcuI CTGAAG 3 cut(s) 1607, 3275, 3398
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 5 cut(s) 1431, 2290, 2866, 3171, 3382
AfeI AGCGCT 1 cut(s) 1222
AfiI CCNNNNNNNGG 5 cut(s) 649, 1418, 1621, 2615, 3190
AflII CTTAAG 1 cut(s) 1783
AgeI ACCGGT 1 cut(s) 3572
AhdI GACNNNNNGTC 1 cut(s) 1776
AjnI CCWGG 5 cut(s) 729, 979, 1537, 2010, 3049
AjuI GAANNNNNNNTTGG 2 cut(s) 2771, 2803
Alw21I GWGCWC 1 cut(s) 3183
Alw26I GTCTC 9 cut(s) 1530, 1566, 1689, 1750, 1922, 1955, 2066, 2186, 2797
AlwI GGATC 8 cut(s) 320, 333, 661, 674, 936, 1146, 1380, 2527
AlwNI CAGNNNCTG 1 cut(s) 869
Ama87I CYCGRG 4 cut(s) 705, 2063, 2144, 3432
Aor51HI AGCGCT 1 cut(s) 1222
AoxI GGCC 4 cut(s) 292, 787, 1729, 3437
ApeKI GCWGC 4 cut(s) 182, 452, 869, 2235
ApoI RAATTY 6 cut(s) 117, 723, 2684, 2896, 3212, 3317
AseI ATTAAT 1 cut(s) 2108
AsiGI ACCGGT 1 cut(s) 3572
Asp700I GAANNNNTTC 6 cut(s) 598, 810, 1080, 1512, 1606, 3033
AspLEI GCGC 1 cut(s) 1223
AspS9I GGNCC 5 cut(s) 292, 977, 1717, 2459, 3437
AsuHPI GGTGA 7 cut(s) 115, 213, 1085, 1726, 2383, 2675, 2719
AvaI CYCGRG 4 cut(s) 705, 2063, 2144, 3432
AvaII GGWCC 3 cut(s) 977, 1717, 2459
BaeI ACNNNNGTAYC 2 cut(s) 2987, 3020
BamHI GGATCC 2 cut(s) 325, 666
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 366
BarI GAAGNNNNNNTAC 2 cut(s) 3502, 3534
BauI CACGAG 1 cut(s) 1187
BbsI GAAGAC 6 cut(s) 304, 428, 864, 1575, 2735, 3510
Bbv12I GWGCWC 1 cut(s) 3183
BbvCI CCTCAGC 1 cut(s) 2990
BbvI GCAGC 4 cut(s) 169, 439, 856, 2247
BccI CCATC 9 cut(s) 1298, 2010, 2300, 2368, 2836, 2852, 3087, 3192, 3257
BceAI ACGGC 2 cut(s) 802, 2243
BcgI CGANNNNNNTGC 2 cut(s) 2044, 2078
BciT130I CCWGG 5 cut(s) 731, 981, 1539, 2012, 3051
BclI TGATCA 1 cut(s) 718
BcoDI GTCTC 9 cut(s) 1530, 1566, 1689, 1750, 1922, 1955, 2066, 2186, 2797
BfaI CTAG 6 cut(s) 198, 791, 1157, 1391, 1406, 2843
BfmI CTRYAG 2 cut(s) 892, 2263
BfoI RGCGCY 1 cut(s) 1224
BfrI CTTAAG 1 cut(s) 1783
BfuAI ACCTGC 2 cut(s) 1934, 3124
BglII AGATCT 5 cut(s) 200, 1442, 1787, 1969, 2317
BisI GCNGC 5 cut(s) 183, 341, 453, 870, 2236
BlpI GCTNAGC 1 cut(s) 2231
BlsI GCNGC 5 cut(s) 184, 342, 454, 871, 2237
Bme1390I CCNGG 5 cut(s) 731, 981, 1539, 2012, 3051
Bme18I GGWCC 3 cut(s) 977, 1717, 2459
BmeRI GACNNNNNGTC 1 cut(s) 1776
BmeT110I CYCGRG 4 cut(s) 705, 2063, 2144, 3432
BmgT120I GGNCC 5 cut(s) 292, 977, 1717, 2459, 3437
BmiI GGNNCC 4 cut(s) 327, 344, 668, 2544
BmrFI CCNGG 5 cut(s) 731, 981, 1539, 2012, 3051
BmrI ACTGGG 1 cut(s) 1782
BmsI GCATC 8 cut(s) 1030, 1467, 2324, 2465, 2878, 2900, 2954, 3244
BmuI ACTGGG 1 cut(s) 1782
BoxI GACNNNNGTC 1 cut(s) 464
BpiI GAAGAC 6 cut(s) 304, 428, 864, 1575, 2735, 3510
BplI GAGNNNNNCTC 2 cut(s) 105, 137
Bpu10I CCTNAGC 2 cut(s) 1167, 2990
Bpu1102I GCTNAGC 1 cut(s) 2231
BpuEI CTTGAG 5 cut(s) 167, 1774, 1979, 2665, 2795
BsaBI GATNNNNATC 3 cut(s) 927, 1371, 2322
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1566, 1922
BsaJI CCNNGG 6 cut(s) 670, 980, 1615, 2010, 2011, 3433
BsaWI WCCGGW 2 cut(s) 3187, 3572
Bsc4I CCNNNNNNNGG 5 cut(s) 649, 1418, 1621, 2615, 3190
Bse118I RCCGGY 1 cut(s) 3572
Bse1I ACTGG 4 cut(s) 974, 1314, 1777, 2213
Bse3DI GCAATG 2 cut(s) 1248, 2962
Bse8I GATNNNNATC 3 cut(s) 927, 1371, 2322
BseBI CCWGG 5 cut(s) 731, 981, 1539, 2012, 3051
BseDI CCNNGG 6 cut(s) 670, 980, 1615, 2010, 2011, 3433
BseJI GATNNNNATC 3 cut(s) 927, 1371, 2322
BseLI CCNNNNNNNGG 5 cut(s) 649, 1418, 1621, 2615, 3190
BseMI GCAATG 2 cut(s) 1248, 2962
BseMII CTCAG 8 cut(s) 101, 417, 453, 1181, 2222, 2246, 2981, 3057
BseNI ACTGG 4 cut(s) 974, 1314, 1777, 2213
BseXI GCAGC 4 cut(s) 169, 439, 856, 2247
BseYI CCCAGC 1 cut(s) 1503
BsgI GTGCAG 2 cut(s) 84, 3102
Bsh1236I CGCG 1 cut(s) 557
BshFI GGCC 4 cut(s) 294, 789, 1731, 3439
BshNI GGYRCC 1 cut(s) 342
BshTI ACCGGT 1 cut(s) 3572
BsiHKAI GWGCWC 1 cut(s) 3183
BsiHKCI CYCGRG 4 cut(s) 705, 2063, 2144, 3432
BsiSI CCGG 2 cut(s) 3188, 3573
BslFI GGGAC 2 cut(s) 1101, 1764
BslI CCNNNNNNNGG 5 cut(s) 649, 1418, 1621, 2615, 3190
BsmAI GTCTC 9 cut(s) 1530, 1566, 1689, 1750, 1922, 1955, 2066, 2186, 2797
BsmFI GGGAC 2 cut(s) 1101, 1764
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 4 cut(s) 294, 789, 1731, 3439
Bso31I GGTCTC 2 cut(s) 1566, 1922
BsoBI CYCGRG 4 cut(s) 705, 2063, 2144, 3432
Bsp1286I GDGCHC 2 cut(s) 366, 3183
Bsp1720I GCTNAGC 1 cut(s) 2231
Bsp19I CCATGG 1 cut(s) 670
BspACI CCGC 9 cut(s) 57, 70, 340, 555, 604, 638, 679, 886, 2369
BspANI GGCC 4 cut(s) 294, 789, 1731, 3439
BspCNI CTCAG 8 cut(s) 102, 418, 454, 1180, 2223, 2247, 2982, 3058
BspFNI CGCG 1 cut(s) 557
BspHI TCATGA 2 cut(s) 610, 1564
BspLI GGNNCC 4 cut(s) 327, 344, 668, 2544
BspMAI CTGCAG 2 cut(s) 896, 2267
BspMI ACCTGC 2 cut(s) 1934, 3124
BspPI GGATC 8 cut(s) 320, 333, 661, 674, 936, 1146, 1380, 2527
BspT107I GGYRCC 1 cut(s) 342
BspTI CTTAAG 1 cut(s) 1783
BspTNI GGTCTC 2 cut(s) 1566, 1922
BsrDI GCAATG 2 cut(s) 1248, 2962
BsrFI RCCGGY 1 cut(s) 3572
BsrI ACTGG 4 cut(s) 974, 1314, 1777, 2213
BssAI RCCGGY 1 cut(s) 3572
BssECI CCNNGG 6 cut(s) 670, 980, 1615, 2010, 2011, 3433
BssNAI GTATAC 1 cut(s) 561
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1187
BssT1I CCWWGG 2 cut(s) 670, 1615
Bst1107I GTATAC 1 cut(s) 561
Bst2BI CACGAG 1 cut(s) 1187
Bst2UI CCWGG 5 cut(s) 731, 981, 1539, 2012, 3051
Bst4CI ACNGT 4 cut(s) 1070, 1473, 1524, 2381
Bst6I CTCTTC 3 cut(s) 19, 804, 3262
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1783
BstAPI GCANNNNNTGC 3 cut(s) 1486, 3472, 3591
BstC8I GCNNGC 7 cut(s) 296, 677, 1348, 1403, 2606, 3297, 3596
BstDSI CCRYGG 1 cut(s) 670
BstFNI CGCG 1 cut(s) 557
BstH2I RGCGCY 1 cut(s) 1224
BstHHI GCGC 1 cut(s) 1223
BstMAI GTCTC 9 cut(s) 1530, 1566, 1689, 1750, 1922, 1955, 2066, 2186, 2797
BstMWI GCNNNNNNNGC 6 cut(s) 449, 681, 1486, 2770, 3472, 3591
BstNI CCWGG 5 cut(s) 731, 981, 1539, 2012, 3051
BstNSI RCATGY 1 cut(s) 679
BstPAI GACNNNNGTC 1 cut(s) 464
BstSCI CCNGG 5 cut(s) 729, 979, 1537, 2010, 3049
BstSFI CTRYAG 2 cut(s) 892, 2263
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 4 cut(s) 169, 439, 856, 2247
BstV2I GAAGAC 6 cut(s) 304, 428, 864, 1575, 2735, 3510
BstX2I RGATCY 8 cut(s) 200, 325, 666, 1138, 1442, 1787, 1969, 2317
BstYI RGATCY 8 cut(s) 200, 325, 666, 1138, 1442, 1787, 1969, 2317
BstZ17I GTATAC 1 cut(s) 561
BsuRI GGCC 4 cut(s) 294, 789, 1731, 3439
BtgI CCRYGG 1 cut(s) 670
BtsIMutI CAGTG 2 cut(s) 2220, 2870
BveI ACCTGC 2 cut(s) 1934, 3124
Cac8I GCNNGC 7 cut(s) 296, 677, 1348, 1403, 2606, 3297, 3596
CaiI CAGNNNCTG 1 cut(s) 869
CciI TCATGA 2 cut(s) 610, 1564
CfoI GCGC 1 cut(s) 1223
Cfr10I RCCGGY 1 cut(s) 3572
Cfr13I GGNCC 5 cut(s) 292, 977, 1717, 2459, 3437
Csp6I GTAC 5 cut(s) 1430, 2289, 2865, 3170, 3381
CspAI ACCGGT 1 cut(s) 3572
CviQI GTAC 5 cut(s) 1430, 2289, 2865, 3170, 3381
DraI TTTAAA 1 cut(s) 2499
DriI GACNNNNNGTC 1 cut(s) 1776
Eam1104I CTCTTC 3 cut(s) 19, 804, 3262
Eam1105I GACNNNNNGTC 1 cut(s) 1776
EarI CTCTTC 3 cut(s) 19, 804, 3262
Eco130I CCWWGG 2 cut(s) 670, 1615
Eco147I AGGCCT 1 cut(s) 1731
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 2 cut(s) 1566, 1922
Eco47I GGWCC 3 cut(s) 977, 1717, 2459
Eco47III AGCGCT 1 cut(s) 1222
Eco57I CTGAAG 3 cut(s) 1607, 3275, 3398
Eco88I CYCGRG 4 cut(s) 705, 2063, 2144, 3432
EcoRI GAATTC 2 cut(s) 117, 3212
EcoRII CCWGG 5 cut(s) 729, 979, 1537, 2010, 3049
EcoT14I CCWWGG 2 cut(s) 670, 1615
EcoT22I ATGCAT 3 cut(s) 281, 1482, 2893
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 670, 1615
FalI AAGNNNNNCTT 2 cut(s) 795, 827
FaqI GGGAC 2 cut(s) 1101, 1764
FauI CCCGC 4 cut(s) 50, 77, 611, 672
FauNDI CATATG 2 cut(s) 505, 632
FbaI TGATCA 1 cut(s) 718
FblI GTMKAC 4 cut(s) 560, 1634, 2429, 2839
Fnu4HI GCNGC 5 cut(s) 183, 341, 453, 870, 2236
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 5 cut(s) 183, 341, 453, 870, 2236
FspBI CTAG 6 cut(s) 198, 791, 1157, 1391, 1406, 2843
GlaI GCGC 1 cut(s) 1222
GluI GCNGC 5 cut(s) 183, 341, 453, 870, 2236
GsaI CCCAGC 1 cut(s) 1507
HaeII RGCGCY 1 cut(s) 1224
HaeIII GGCC 4 cut(s) 294, 789, 1731, 3439
HapII CCGG 2 cut(s) 3188, 3573
HhaI GCGC 1 cut(s) 1223
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1221
HinP1I GCGC 1 cut(s) 1221
HincII GTYRAC 3 cut(s) 9, 936, 1635
HindII GTYRAC 3 cut(s) 9, 936, 1635
HindIII AAGCTT 2 cut(s) 2027, 2771
HpaII CCGG 2 cut(s) 3188, 3573
HphI GGTGA 7 cut(s) 115, 213, 1085, 1726, 2383, 2675, 2719
Hpy166II GTNNAC 8 cut(s) 9, 561, 936, 1520, 1635, 1717, 2430, 2840
Hpy8I GTNNAC 8 cut(s) 9, 561, 936, 1520, 1635, 1717, 2430, 2840
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 4 cut(s) 1070, 1473, 1524, 2381
HpyCH4IV ACGT 2 cut(s) 1546, 2167
HpyF10VI GCNNNNNNNGC 6 cut(s) 449, 681, 1486, 2770, 3472, 3591
HpySE526I ACGT 2 cut(s) 1546, 2167
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1221
Ksp22I TGATCA 1 cut(s) 718
LmnI GCTCC 4 cut(s) 866, 984, 1704, 2542
Lsp1109I GCAGC 4 cut(s) 169, 439, 856, 2247
LweI GCATC 8 cut(s) 1030, 1467, 2324, 2465, 2878, 2900, 2954, 3244
MaeI CTAG 6 cut(s) 198, 791, 1157, 1391, 1406, 2843
MaeII ACGT 2 cut(s) 1546, 2167
MaeIII GTNAC 2 cut(s) 1378, 2690
MfeI CAATTG 4 cut(s) 186, 2220, 2935, 3555
MflI RGATCY 8 cut(s) 200, 325, 666, 1138, 1442, 1787, 1969, 2317
MhlI GDGCHC 2 cut(s) 366, 3183
MlyI GAGTC 3 cut(s) 1640, 2077, 3142
MmeI TCCRAC 2 cut(s) 1485, 2134
Mph1103I ATGCAT 3 cut(s) 281, 1482, 2893
MroXI GAANNNNTTC 6 cut(s) 598, 810, 1080, 1512, 1606, 3033
MslI CAYNNNNRTG 2 cut(s) 1625, 3084
MspA1I CMGCKG 1 cut(s) 57
MspCI CTTAAG 1 cut(s) 1783
MspI CCGG 2 cut(s) 3188, 3573
MspR9I CCNGG 5 cut(s) 731, 981, 1539, 2012, 3051
MunI CAATTG 4 cut(s) 186, 2220, 2935, 3555
Mva1269I GAATGC 1 cut(s) 606
MvaI CCWGG 5 cut(s) 731, 981, 1539, 2012, 3051
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 6 cut(s) 449, 681, 1486, 2770, 3472, 3591
NcoI CCATGG 1 cut(s) 670
NdeI CATATG 2 cut(s) 505, 632
NlaIV GGNNCC 4 cut(s) 327, 344, 668, 2544
NmeAIII GCCGAG 1 cut(s) 2325
NmuCI GTSAC 2 cut(s) 1378, 2690
NsiI ATGCAT 3 cut(s) 281, 1482, 2893
NspI RCATGY 1 cut(s) 679
PaeI GCATGC 1 cut(s) 679
PaeR7I CTCGAG 2 cut(s) 705, 2063
PagI TCATGA 2 cut(s) 610, 1564
PaqCI CACCTGC 1 cut(s) 1934
PasI CCCWGGG 1 cut(s) 2011
PceI AGGCCT 1 cut(s) 1731
PcsI WCGNNNNNNNCGW 1 cut(s) 652
PctI GAATGC 1 cut(s) 606
PdmI GAANNNNTTC 6 cut(s) 598, 810, 1080, 1512, 1606, 3033
PflFI GACNNNGTC 1 cut(s) 1412
PflMI CCANNNNNTGG 2 cut(s) 1621, 3190
PfoI TCCNGGA 1 cut(s) 3049
PinAI ACCGGT 1 cut(s) 3572
PkrI GCNGC 5 cut(s) 184, 342, 454, 871, 2237
PleI GAGTC 3 cut(s) 1639, 2076, 3141
PpsI GAGTC 3 cut(s) 1639, 2076, 3141
PshAI GACNNNNGTC 1 cut(s) 464
PshBI ATTAAT 1 cut(s) 2108
PsiI TTATAA 1 cut(s) 47
Psp1406I AACGTT 1 cut(s) 2167
Psp6I CCWGG 5 cut(s) 729, 979, 1537, 2010, 3049
PspFI CCCAGC 1 cut(s) 1503
PspGI CCWGG 5 cut(s) 729, 979, 1537, 2010, 3049
PspN4I GGNNCC 4 cut(s) 327, 344, 668, 2544
PspPI GGNCC 5 cut(s) 292, 977, 1717, 2459, 3437
PspXI VCTCGAGB 1 cut(s) 705
PstI CTGCAG 2 cut(s) 896, 2267
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 8 cut(s) 200, 325, 666, 1138, 1442, 1787, 1969, 2317
PsyI GACNNNGTC 1 cut(s) 1412
RsaI GTAC 5 cut(s) 1431, 2290, 2866, 3171, 3382
RsaNI GTAC 5 cut(s) 1430, 2289, 2865, 3170, 3381
RseI CAYNNNNRTG 2 cut(s) 1625, 3084
SalI GTCGAC 1 cut(s) 1633
SatI GCNGC 5 cut(s) 183, 341, 453, 870, 2236
Sau96I GGNCC 5 cut(s) 292, 977, 1717, 2459, 3437
SchI GAGTC 3 cut(s) 1640, 2077, 3142
ScrFI CCNGG 5 cut(s) 731, 981, 1539, 2012, 3051
SduI GDGCHC 2 cut(s) 366, 3183
SfaNI GCATC 8 cut(s) 1030, 1467, 2324, 2465, 2878, 2900, 2954, 3244
SfcI CTRYAG 2 cut(s) 892, 2263
Sfr274I CTCGAG 2 cut(s) 705, 2063
SgrAI CRCCGGYG 1 cut(s) 3572
SinI GGWCC 3 cut(s) 977, 1717, 2459
SlaI CTCGAG 2 cut(s) 705, 2063
SmiMI CAYNNNNRTG 2 cut(s) 1625, 3084
SmlI CTYRAG 8 cut(s) 146, 705, 1753, 1783, 1958, 2063, 2644, 2774
SmoI CTYRAG 8 cut(s) 146, 705, 1753, 1783, 1958, 2063, 2644, 2774
SphI GCATGC 1 cut(s) 679
SseBI AGGCCT 1 cut(s) 1731
SsiI CCGC 9 cut(s) 57, 70, 340, 555, 604, 638, 679, 886, 2369
SspI AATATT 2 cut(s) 1332, 3061
SspMI CTAG 6 cut(s) 198, 791, 1157, 1391, 1406, 2843
StuI AGGCCT 1 cut(s) 1731
StyD4I CCNGG 5 cut(s) 729, 979, 1537, 2010, 3049
StyI CCWWGG 2 cut(s) 670, 1615
TaaI ACNGT 4 cut(s) 1070, 1473, 1524, 2381
TaiI ACGT 2 cut(s) 1549, 2170
TaqI TCGA 5 cut(s) 706, 1475, 1634, 2064, 3261
TaqII GACCGA 2 cut(s) 153, 756
TatI WGTACW 3 cut(s) 1429, 2864, 3169
TauI GCSGC 1 cut(s) 343
TscAI CASTG 2 cut(s) 2220, 2877
TseFI GTSAC 2 cut(s) 1378, 2690
TseI GCWGC 4 cut(s) 182, 452, 869, 2235
Tsp45I GTSAC 2 cut(s) 1378, 2690
TspGWI ACGGA 1 cut(s) 2555
TspRI CASTG 2 cut(s) 2220, 2877
Tth111I GACNNNGTC 1 cut(s) 1412
Van91I CCANNNNNTGG 2 cut(s) 1621, 3190
Vha464I CTTAAG 1 cut(s) 1783
VpaK11BI GGWCC 3 cut(s) 977, 1717, 2459
VspI ATTAAT 1 cut(s) 2108
XapI RAATTY 6 cut(s) 117, 723, 2684, 2896, 3212, 3317
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 679
XcmI CCANNNNNNNNNTGG 1 cut(s) 3086
XhoI CTCGAG 2 cut(s) 705, 2063
XmiI GTMKAC 4 cut(s) 560, 1634, 2429, 2839
XmnI GAANNNNTTC 6 cut(s) 598, 810, 1080, 1512, 1606, 3033
XspI CTAG 6 cut(s) 198, 791, 1157, 1391, 1406, 2843
Zsp2I ATGCAT 3 cut(s) 281, 1482, 2893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.