pycom12g12340

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000105
Physical Location & Seq
Reverse (-)
14840908 .. 14842832
1925 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g12340.3

Sequence Viewer

Length: 1764 bp
ATGCTTTACCTACAACTAAAGGTGAGGACAATCAACAACTGTCACCACTATGACAACTATGACAAACTTCTTCCAATACTAAGTAACTGTAAACTTCGGGAAGGAGCATTTCTCAATGGCCTTGGGGTCTTATCCTCACTAGTGGCATTGAATCTCAGCGGAAATAATTTTGTTAGTCTTCCATCAAGCATCCGATCCCTTGTTAAGCTTGAGAGCATTAACATCGAGAACTGCAAGAGACTTACAGAGCTGTCAGGTCTCCCATCAAATAGTAAATTGGATGTGAGGGCAGATGGTTGCTCGTCCCTTCAAATTTTCAATACATCCGGGCTCAATGTATTGGAGAAATCATATTTCAATTTCCTGAATTGCTTCAAACTAAATGACAACCAAAGTTTACTTAATATGACATTTGAAATGCTGAAGAAATTCCTTCATCAGGGACACTCTAGTGCAAGAGAAACTTTCCAAATTGCAATTCCTGGAAGTGAAATTCCTAAGTGGTTCAGCCATCAAAACGATGTTGGGAGTTCATTAACCATAGACCTACCTCCACTTTGGAATAAAAGTAAGTTCATGGGATACGCTCTGTGTGCTGTTTTTGTACTAGACGAACATTGTGTGGTTGATGAACACGATACATTTCATTTCAAAACTTTCCTTGCTACACATCATCTTGTGTGTCGACTGAAACACAGTGGAAAACAATTAGAAGTATGTGGCACACAGCCTGCCTTTTGCATTAGCGAAAGGTTTTGCCAGGTTGATTCGGATCATCTTTGGATGTTCTCTGTATCCTGTGATAAACACTTTGGTACGGACTGGCATAACAGTTGCAGTCAGATTGAGTTCTTGTTTGAAACCAGAGGGCCAGGCTTGAAGGTGAAGAAGTGCAGAGTACAGTTGATGTACGAGCAAGATGTGCAAGCTCTACAATCTGAAAGTGCCACTGTTAATACATCAATTTTTCCAGTTGAGGAGGATGTCATCAACATGATCGATGATAACGTGACACACACTTCCTCGGATATGACATTACATCAAAGGGAATGGCAACTTTTCCATTCTAACGGTTTTTCTCATTCTGCGGGCATAAACGAGGACATAACCAAACGTGCTTCGTCGGACTCCTATCTACAGTGGACACAATGGCAACTGCTGGATTCCATCCTCCCAACAGGCGGTTTTACTCATTCTTTTGGTCTCGAGGCTGCGATCCAAGCTCGTGTAGTGTCTAGTCCCGAAGATCTACAAACCTTTATAATCCGTCTGTTGGAGAATACAGGAAGCTTGCTCCTTCCGTTTGTGTATTCTACAACAATATCACCTGATCTAGAGACCACTCGCAAACTCGATAAGATGTTGGATGCAATGCTTACCGATGAAGTGGTTAGAAAGGCGTCGATTTCAAAGGGCATGGAACTAATGAGGGTGGCCGCAGCTGTGTATGTAGAAATACCATCGGTTAAATCTACGATGGAAGCTTGGTTAAGTTCCGGGGGCGTTTCTTTTCACCATGCTCATGCATTTGGCCTTATATGTGGACTGCTAGGATTGGATAGCACTACTACTCAAAGAGCGTACATGTTTATTACAATGAGAGATGTTATTTCTGCTGCAACAAGGCTCAATCTGGTAGGCCCCCTTGGTGCGGCTGTGCTGCAGCATAAGATTGCTTCCAGTGCCGCTGAAGCTATACTTAATCGGTGGAAGGACCGCCCAGTTGAGGAAGCATCGCAAGCTCTTTCTTTGCCCCAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

588

Amino Acids

65.66

Weight (kDa)

6.08

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1262
AccI GTMKAC 1 cut(s) 685
AciI CCGC 7 cut(s) 159, 1088, 1182, 1437, 1652, 1686, 1717
AclWI GGATC 3 cut(s) 189, 780, 1210
AcoI YGGCCR 1 cut(s) 1434
AcsI RAATTY 4 cut(s) 312, 428, 492, 1758
AcuI CTGAAG 2 cut(s) 443, 1710
AcyI GRCGYC 1 cut(s) 1400
AfaI GTAC 5 cut(s) 606, 817, 900, 911, 1583
AfiI CCNNNNNNNGG 5 cut(s) 439, 1181, 1273, 1651, 1726
AflIII ACRYGT 1 cut(s) 1584
AhlI ACTAGT 1 cut(s) 139
AjnI CCWGG 3 cut(s) 481, 759, 871
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 450
AluBI AGCT 9 cut(s) 208, 250, 929, 1223, 1290, 1442, 1484, 1694, 1742
AluI AGCT 9 cut(s) 208, 250, 929, 1223, 1290, 1442, 1484, 1694, 1742
Alw26I GTCTC 4 cut(s) 232, 263, 1208, 1331
AlwI GGATC 3 cut(s) 189, 780, 1210
Ama87I CYCGRG 1 cut(s) 1205
AoxI GGCC 5 cut(s) 118, 869, 1434, 1531, 1639
ApeKI GCWGC 5 cut(s) 1211, 1439, 1616, 1660, 1663
ApoI RAATTY 4 cut(s) 312, 428, 492, 1758
Asp700I GAANNNNTTC 2 cut(s) 371, 428
AspS9I GGNCC 3 cut(s) 869, 1640, 1714
AsuC2I CCSGG 2 cut(s) 328, 1498
AsuHPI GGTGA 5 cut(s) 34, 35, 895, 1317, 1505
AvaI CYCGRG 1 cut(s) 1205
AvaII GGWCC 1 cut(s) 1714
BanII GRGCYC 1 cut(s) 333
BauI CACGAG 1 cut(s) 1224
BbsI GAAGAC 1 cut(s) 170
BbvI GCAGC 5 cut(s) 1198, 1451, 1603, 1647, 1675
BccI CCATC 7 cut(s) 190, 271, 287, 519, 1175, 1468, 1471
BcgI CGANNNNNNTGC 2 cut(s) 205, 239
BciT130I CCWGG 3 cut(s) 483, 761, 873
BciVI GTATCC 2 cut(s) 575, 805
BcnI CCSGG 2 cut(s) 328, 1498
BcoDI GTCTC 4 cut(s) 232, 263, 1208, 1331
BcuI ACTAGT 1 cut(s) 139
BfaI CTAG 6 cut(s) 140, 450, 608, 1236, 1334, 1550
BfmI CTRYAG 2 cut(s) 1136, 1661
BfuI GTATCC 2 cut(s) 575, 805
BglII AGATCT 1 cut(s) 1246
BisI GCNGC 8 cut(s) 1212, 1437, 1440, 1617, 1653, 1661, 1664, 1686
BlsI GCNGC 8 cut(s) 1213, 1438, 1441, 1618, 1654, 1662, 1665, 1687
Bme1390I CCNGG 5 cut(s) 328, 483, 761, 873, 1498
Bme18I GGWCC 1 cut(s) 1714
BmeT110I CYCGRG 1 cut(s) 1205
BmgT120I GGNCC 3 cut(s) 869, 1640, 1714
BmiI GGNNCC 1 cut(s) 1642
BmrFI CCNGG 5 cut(s) 328, 483, 761, 873, 1498
BmrI ACTGGG 1 cut(s) 1715
BmsI GCATC 3 cut(s) 198, 1357, 1742
BmuI ACTGGG 1 cut(s) 1715
BpiI GAAGAC 1 cut(s) 170
BplI GAGNNNNNCTC 2 cut(s) 96, 128
BpuEI CTTGAG 1 cut(s) 230
BpuMI CCSGG 2 cut(s) 328, 1498
Bsa29I ATCGAT 1 cut(s) 999
BsaBI GATNNNNATC 1 cut(s) 771
BsaHI GRCGYC 1 cut(s) 1400
BsaI GGTCTC 3 cut(s) 263, 1208, 1331
BsaJI CCNNGG 4 cut(s) 121, 1023, 1497, 1645
Bsc4I CCNNNNNNNGG 5 cut(s) 439, 1181, 1273, 1651, 1726
Bse1I ACTGG 4 cut(s) 827, 971, 1680, 1721
Bse3DI GCAATG 1 cut(s) 1377
Bse8I GATNNNNATC 1 cut(s) 771
BseBI CCWGG 3 cut(s) 483, 761, 873
BseCI ATCGAT 1 cut(s) 999
BseDI CCNNGG 4 cut(s) 121, 1023, 1497, 1645
BseGI GGATG 7 cut(s) 189, 286, 323, 789, 988, 1167, 1372
BseJI GATNNNNATC 1 cut(s) 771
BseLI CCNNNNNNNGG 5 cut(s) 439, 1181, 1273, 1651, 1726
BseMI GCAATG 1 cut(s) 1377
BseMII CTCAG 1 cut(s) 169
BseNI ACTGG 4 cut(s) 827, 971, 1680, 1721
BseRI GAGGAG 1 cut(s) 992
BseXI GCAGC 5 cut(s) 1198, 1451, 1603, 1647, 1675
BsgI GTGCAG 1 cut(s) 913
BshFI GGCC 5 cut(s) 120, 871, 1436, 1533, 1641
BshVI ATCGAT 1 cut(s) 999
BsiHKCI CYCGRG 1 cut(s) 1205
BsiSI CCGG 2 cut(s) 327, 1497
BslFI GGGAC 3 cut(s) 289, 456, 1224
BslI CCNNNNNNNGG 5 cut(s) 439, 1181, 1273, 1651, 1726
BsmAI GTCTC 4 cut(s) 232, 263, 1208, 1331
BsmFI GGGAC 3 cut(s) 289, 456, 1224
BsnI GGCC 5 cut(s) 120, 871, 1436, 1533, 1641
Bso31I GGTCTC 3 cut(s) 263, 1208, 1331
BsoBI CYCGRG 1 cut(s) 1205
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
BspACI CCGC 7 cut(s) 159, 1088, 1182, 1437, 1652, 1686, 1717
BspANI GGCC 5 cut(s) 120, 871, 1436, 1533, 1641
BspCNI CTCAG 1 cut(s) 168
BspDI ATCGAT 1 cut(s) 999
BspLI GGNNCC 1 cut(s) 1642
BspMAI CTGCAG 1 cut(s) 1665
BspPI GGATC 3 cut(s) 189, 780, 1210
BspTNI GGTCTC 3 cut(s) 263, 1208, 1331
BsrDI GCAATG 1 cut(s) 1377
BsrI ACTGG 4 cut(s) 827, 971, 1680, 1721
BssECI CCNNGG 4 cut(s) 121, 1023, 1497, 1645
BssMI GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
BssNI GRCGYC 1 cut(s) 1400
BssSI CACGAG 1 cut(s) 1224
BssT1I CCWWGG 2 cut(s) 121, 1645
Bst2BI CACGAG 1 cut(s) 1224
Bst2UI CCWGG 3 cut(s) 483, 761, 873
Bst4CI ACNGT 8 cut(s) 41, 89, 698, 833, 903, 952, 1073, 1140
BstACI GRCGYC 1 cut(s) 1400
BstAPI GCANNNNNTGC 1 cut(s) 922
BstC8I GCNNGC 5 cut(s) 732, 927, 1090, 1292, 1740
BstDEI CTNAG 3 cut(s) 80, 155, 498
BstENI CCTNNNNNAGG 1 cut(s) 437
BstF5I GGATG 7 cut(s) 189, 286, 323, 789, 988, 1167, 1372
BstKTI GATC 6 cut(s) 197, 775, 999, 1218, 1249, 1333
BstMAI GTCTC 4 cut(s) 232, 263, 1208, 1331
BstMBI GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
BstMWI GCNNNNNNNGC 6 cut(s) 593, 922, 1220, 1682, 1691, 1739
BstNI CCWGG 3 cut(s) 483, 761, 873
BstNSI RCATGY 1 cut(s) 1588
BstSCI CCNGG 5 cut(s) 326, 481, 759, 871, 1496
BstSFI CTRYAG 2 cut(s) 1136, 1661
BstV1I GCAGC 5 cut(s) 1198, 1451, 1603, 1647, 1675
BstV2I GAAGAC 1 cut(s) 170
BstX2I RGATCY 1 cut(s) 1246
BstYI RGATCY 1 cut(s) 1246
Bsu15I ATCGAT 1 cut(s) 999
BsuI GTATCC 2 cut(s) 575, 805
BsuRI GGCC 5 cut(s) 120, 871, 1436, 1533, 1641
BsuTUI ATCGAT 1 cut(s) 999
BtgZI GCGATG 1 cut(s) 1719
BtsCI GGATG 7 cut(s) 189, 286, 323, 789, 988, 1167, 1372
BtsIMutI CAGTG 4 cut(s) 703, 948, 1145, 1687
Cac8I GCNNGC 5 cut(s) 732, 927, 1090, 1292, 1740
Cfr13I GGNCC 3 cut(s) 869, 1640, 1714
ClaI ATCGAT 1 cut(s) 999
CseI GACGC 1 cut(s) 1389
Csp6I GTAC 5 cut(s) 605, 816, 899, 910, 1582
CviAII CATG 6 cut(s) 577, 994, 1417, 1517, 1523, 1585
CviQI GTAC 5 cut(s) 605, 816, 899, 910, 1582
DdeI CTNAG 3 cut(s) 80, 155, 498
DpnI GATC 6 cut(s) 196, 774, 998, 1217, 1248, 1332
DpnII GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
EaeI YGGCCR 1 cut(s) 1434
Eco130I CCWWGG 2 cut(s) 121, 1645
Eco24I GRGCYC 1 cut(s) 333
Eco31I GGTCTC 3 cut(s) 263, 1208, 1331
Eco47I GGWCC 1 cut(s) 1714
Eco57I CTGAAG 2 cut(s) 443, 1710
Eco88I CYCGRG 1 cut(s) 1205
EcoNI CCTNNNNNAGG 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 1640
EcoRII CCWGG 3 cut(s) 481, 759, 871
EcoT14I CCWWGG 2 cut(s) 121, 1645
EcoT22I ATGCAT 1 cut(s) 1528
EcoT38I GRGCYC 1 cut(s) 333
ErhI CCWWGG 2 cut(s) 121, 1645
FaeI CATG 6 cut(s) 580, 997, 1420, 1520, 1526, 1588
FalI AAGNNNNNCTT 4 cut(s) 448, 480, 1683, 1715
FaqI GGGAC 3 cut(s) 289, 456, 1224
FatI CATG 6 cut(s) 576, 993, 1416, 1516, 1522, 1584
FauI CCCGC 1 cut(s) 1081
FblI GTMKAC 1 cut(s) 685
Fnu4HI GCNGC 8 cut(s) 1212, 1437, 1440, 1617, 1653, 1661, 1664, 1686
FokI GGATG 7 cut(s) 176, 293, 310, 796, 995, 1154, 1379
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 8 cut(s) 1212, 1437, 1440, 1617, 1653, 1661, 1664, 1686
FspBI CTAG 6 cut(s) 140, 450, 608, 1236, 1334, 1550
GluI GCNGC 8 cut(s) 1212, 1437, 1440, 1617, 1653, 1661, 1664, 1686
HaeIII GGCC 5 cut(s) 120, 871, 1436, 1533, 1641
HapII CCGG 2 cut(s) 327, 1497
HgaI GACGC 1 cut(s) 1389
Hin1I GRCGYC 1 cut(s) 1400
Hin1II CATG 6 cut(s) 580, 997, 1420, 1520, 1526, 1588
HincII GTYRAC 1 cut(s) 686
HindII GTYRAC 1 cut(s) 686
HindIII AAGCTT 3 cut(s) 206, 1288, 1482
HinfI GANTC 4 cut(s) 151, 767, 1127, 1163
HpaII CCGG 2 cut(s) 327, 1497
HphI GGTGA 5 cut(s) 34, 35, 895, 1317, 1505
Hpy166II GTNNAC 5 cut(s) 92, 398, 686, 1143, 1544
Hpy188I TCNGA 6 cut(s) 194, 772, 843, 940, 1027, 1126
Hpy188III TCNNGA 6 cut(s) 98, 226, 364, 1205, 1241, 1334
Hpy8I GTNNAC 5 cut(s) 92, 398, 686, 1143, 1544
Hpy99I CGWCG 2 cut(s) 1126, 1405
HpyAV CCTTC 6 cut(s) 95, 317, 443, 874, 1307, 1705
HpyCH4III ACNGT 8 cut(s) 41, 89, 698, 833, 903, 952, 1073, 1140
HpyCH4IV ACGT 2 cut(s) 1008, 1114
HpyF10VI GCNNNNNNNGC 6 cut(s) 593, 922, 1220, 1682, 1691, 1739
HpyF3I CTNAG 3 cut(s) 80, 155, 498
HpySE526I ACGT 2 cut(s) 1008, 1114
Hsp92I GRCGYC 1 cut(s) 1400
Hsp92II CATG 6 cut(s) 580, 997, 1420, 1520, 1526, 1588
Kzo9I GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
LmnI GCTCC 2 cut(s) 104, 1299
Lsp1109I GCAGC 5 cut(s) 1198, 1451, 1603, 1647, 1675
LweI GCATC 3 cut(s) 198, 1357, 1742
MaeI CTAG 6 cut(s) 140, 450, 608, 1236, 1334, 1550
MaeII ACGT 2 cut(s) 1008, 1114
MaeIII GTNAC 3 cut(s) 41, 83, 1009
MalI GATC 6 cut(s) 196, 774, 998, 1217, 1248, 1332
MboI GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
MboII GAAGA 5 cut(s) 62, 170, 436, 898, 1256
MflI RGATCY 1 cut(s) 1246
MhlI GDGCHC 1 cut(s) 333
MlyI GAGTC 1 cut(s) 1121
MmeI TCCRAC 3 cut(s) 1104, 1254, 1344
Mph1103I ATGCAT 1 cut(s) 1528
MroXI GAANNNNTTC 2 cut(s) 371, 428
MseI TTAA 8 cut(s) 204, 219, 402, 536, 954, 1467, 1490, 1701
MslI CAYNNNNRTG 4 cut(s) 48, 450, 992, 1521
MspA1I CMGCKG 3 cut(s) 159, 1442, 1688
MspI CCGG 2 cut(s) 327, 1497
MspR9I CCNGG 5 cut(s) 328, 483, 761, 873, 1498
MvaI CCWGG 3 cut(s) 483, 761, 873
MwoI GCNNNNNNNGC 6 cut(s) 593, 922, 1220, 1682, 1691, 1739
NciI CCSGG 2 cut(s) 328, 1498
NdeII GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
NlaIII CATG 6 cut(s) 580, 997, 1420, 1520, 1526, 1588
NlaIV GGNNCC 1 cut(s) 1642
NmuCI GTSAC 2 cut(s) 41, 1009
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 1 cut(s) 1588
OliI CACNNNNGTG 1 cut(s) 450
PaeR7I CTCGAG 1 cut(s) 1205
PciI ACATGT 1 cut(s) 1584
PcsI WCGNNNNNNNCGW 1 cut(s) 1005
PdmI GAANNNNTTC 2 cut(s) 371, 428
PfeI GAWTC 3 cut(s) 151, 767, 1163
PfoI TCCNGGA 1 cut(s) 481
PkrI GCNGC 8 cut(s) 1213, 1438, 1441, 1618, 1654, 1662, 1665, 1687
PleI GAGTC 1 cut(s) 1121
PpsI GAGTC 1 cut(s) 1121
PscI ACATGT 1 cut(s) 1584
PsiI TTATAA 1 cut(s) 1262
Psp6I CCWGG 3 cut(s) 481, 759, 871
PspGI CCWGG 3 cut(s) 481, 759, 871
PspN4I GGNNCC 1 cut(s) 1642
PspPI GGNCC 3 cut(s) 869, 1640, 1714
PstI CTGCAG 1 cut(s) 1665
PsuI RGATCY 1 cut(s) 1246
PvuII CAGCTG 1 cut(s) 1442
RsaI GTAC 5 cut(s) 606, 817, 900, 911, 1583
RsaNI GTAC 5 cut(s) 605, 816, 899, 910, 1582
RseI CAYNNNNRTG 4 cut(s) 48, 450, 992, 1521
SalI GTCGAC 1 cut(s) 684
SaqAI TTAA 8 cut(s) 204, 219, 402, 536, 954, 1467, 1490, 1701
SatI GCNGC 8 cut(s) 1212, 1437, 1440, 1617, 1653, 1661, 1664, 1686
Sau3AI GATC 6 cut(s) 194, 772, 996, 1215, 1246, 1330
Sau96I GGNCC 3 cut(s) 869, 1640, 1714
SchI GAGTC 1 cut(s) 1121
ScrFI CCNGG 5 cut(s) 328, 483, 761, 873, 1498
SduI GDGCHC 1 cut(s) 333
SfaNI GCATC 3 cut(s) 198, 1357, 1742
SfcI CTRYAG 2 cut(s) 1136, 1661
Sfr274I CTCGAG 1 cut(s) 1205
SinI GGWCC 1 cut(s) 1714
SlaI CTCGAG 1 cut(s) 1205
SmiMI CAYNNNNRTG 4 cut(s) 48, 450, 992, 1521
SmlI CTYRAG 2 cut(s) 209, 1205
SmoI CTYRAG 2 cut(s) 209, 1205
SpeI ACTAGT 1 cut(s) 139
SsiI CCGC 7 cut(s) 159, 1088, 1182, 1437, 1652, 1686, 1717
SspMI CTAG 6 cut(s) 140, 450, 608, 1236, 1334, 1550
StyD4I CCNGG 5 cut(s) 326, 481, 759, 871, 1496
StyI CCWWGG 2 cut(s) 121, 1645
TaaI ACNGT 8 cut(s) 41, 89, 698, 833, 903, 952, 1073, 1140
TaiI ACGT 2 cut(s) 1011, 1117
TaqI TCGA 6 cut(s) 225, 685, 999, 1206, 1353, 1403
TatI WGTACW 2 cut(s) 604, 898
TauI GCSGC 3 cut(s) 1439, 1655, 1688
TfiI GAWTC 3 cut(s) 151, 767, 1163
Tru1I TTAA 8 cut(s) 204, 219, 402, 536, 954, 1467, 1490, 1701
Tru9I TTAA 8 cut(s) 204, 219, 402, 536, 954, 1467, 1490, 1701
TscAI CASTG 4 cut(s) 703, 955, 1145, 1687
TseFI GTSAC 2 cut(s) 41, 1009
TseI GCWGC 5 cut(s) 1211, 1439, 1616, 1660, 1663
Tsp45I GTSAC 2 cut(s) 41, 1009
TspDTI ATGAA 6 cut(s) 425, 522, 565, 635, 645, 1398
TspGWI ACGGA 3 cut(s) 833, 1256, 1290
TspRI CASTG 4 cut(s) 703, 955, 1145, 1687
VpaK11BI GGWCC 1 cut(s) 1714
XagI CCTNNNNNAGG 1 cut(s) 437
XapI RAATTY 4 cut(s) 312, 428, 492, 1758
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 1 cut(s) 1588
XhoI CTCGAG 1 cut(s) 1205
XmiI GTMKAC 1 cut(s) 685
XmnI GAANNNNTTC 2 cut(s) 371, 428
XspI CTAG 6 cut(s) 140, 450, 608, 1236, 1334, 1550
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.