FvH4_2g00570

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000105
Physical Location & Seq
Forward (+)
602445 .. 605543
3099 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g00570.t1

Sequence Viewer

Length: 1959 bp
ATGGTAATGGAGTTGCCTAAGTTAGAAGTGGCTCAGTGGAATCCAGAAGCCTTTTCAAATTTGTCTCAACTTAGTCTTCTCCATATTCGTAATGTGGACCTTCCAAAAGGCCTCACGTGTCTTTCTAATTCCTTGAGACTCCTGGAATGGACTGGGTGTCCATTAAGATCCCTCCCACAAAGTTTTGAACCAGATGAACTTATTGAACTTAGCTTGTGCCACAGCAACATCGAATACCTGTGGAAAGGAGCAAAGAATTATGACAAGTTAAAGTTCATCAAACTATGCCATTCTCAAAAACTTGTCCAGGCCCCAGATCTCACAGGCGTTCATAATCTTGAGACTTTAGATCTTGAAGGATGTTACACTTTGGTAAGACTTCATCAATCTCTTGGACAACTTAAAAAGCTTATTGTATTGAATGTTAAAGATTGCAAGAGTCTCGAGAATCTGCCAAGTAAGATTGAAATGGAATCTCTTAAAACTTTTATTCTAACCAACTGCTCAAAAGTTAAAAAGATTCCAGAGTTTGCTGGAAATATGGAGTGTTTATCTGAGCTTTATCTTGATGAGACTGCCATTGAAAAACTACCTGACTCAATTGGATGCCTGAGTGGCCTTGCTTCGCTGAATCTGAGCAACTGTAGAAATCTTGTTTGCCTTCCAAGCACCTTTAGTAGATTGGAGTCCCTTAAAAAGCTCAATCTTTCTGGATGTTTGAAACTTGGCGAACAGGATAGTGCCAGGGAGAATGGTGCAATTAGATCTGCTGTAAATCATCTTATGAAACGTGGTTGTGAAGTTGTTGGGAAGTACTTGTCATGGTCCTTGCCTTCTAGATTGGTGCAAACAGCCGATGTAGAACCAACGAGTACGCAGTCGCCTGCATCTGATCTGTGTTATTCTACAGTGCAAAATACAAGTACATCCATGAGTATCCGGTTGCCACTATCTCGTCTATGTAATTTAATACATCTAAACATAAGTAACTGCAATCTTGGTGACGCTGCATTTTCCAACGCCTGTTTTCCCTTCTTAGAGACTGTAAATCTGAGTGGAAATAAAATTGTTAAGCTTCCTCCAAGCATCAGGTCCTGTTTGAAGCTTCAGTACATTAACTTGGAGAATTGCAAGACACTACAAGAGTTGTCAGGCCTTCCATCAAATAGTAAATTGGATGTGAGGGCAGATGGTTGTTCTTCTCTGGAGATGCTGTTTGATGTATCCAATTTCAATGGACTGGAGACATCATTTTTCAATTTCATCAATTGCTTCAAACTAAATGACAATCAGGGCAGCACTAACATAGCATTTCAGATGCTGAGGATATTCCTTAATCAGCGAAATTCTATTGCGACGGAAACTTTTCAAATTGTAATTCCTGGAAGTAGAATTCCCGAGTGGTTTGATCATCGAAGATTTGGGAGTTCATTAATTGTACACCTACTTCCAGGTAGGAATAAGAGTAGGTTTTTGGGATTTGTCTTGTGTGCTGTTTTTGCACTTCATGAGCACCTTCCGGTTGATGAGCTTGATATACGTCAGTTCAAGACTTTTAAGGCTACTCATCATCTTGTATGTTGTCTGAAGCTCAATGGGAGAGAACTAGAAGTATATGGCAAACAGCCTGCATATCGCTTTAGCGAACAATTTTGCCAGGTTGAGTCAGATCACCTTTGGATTTTCTATGTGTCCCGAGATAAGTACTTCGGTACAAATTGGTGGAACAGTTGCAGTCAGCTTGAGTTCTTATTTGAAACCAGAGGGCCAGGGCTGAAGGTGAAGGAGTGCGGGGCACATCTGATATATGAGCAAGACATGCAAGAGTTAAATCAAACAATGAGTCAATCAAGCAGAATGATGTCTCCATATGACGGTATATTGATTGATTTTGAGAATCGAGTTGAAGGGGAAACCAGTGGTACTGGTAGCAGAACCTGCACCCTTGAAGAACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

653

Amino Acids

73.62

Weight (kDa)

6.45

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 158 - 245 2.5e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 169 - 237 6.6e-07 Leucine-rich repeat region
C-JID PF20160 460 - 607 1.7e-14 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1946
AciI CCGC 1 cut(s) 1791
AclWI GGATC 1 cut(s) 162
AcsI RAATTY 3 cut(s) 58, 1345, 1392
AcuI CTGAAG 3 cut(s) 1091, 1607, 1796
AcvI CACGTG 1 cut(s) 117
AfaI GTAC 8 cut(s) 815, 874, 925, 1112, 1440, 1706, 1714, 1924
AfiI CCNNNNNNNGG 1 cut(s) 1874
AflIII ACRYGT 1 cut(s) 116
AhdI GACNNNNNGTC 1 cut(s) 156
AjnI CCWGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
AluBI AGCT 9 cut(s) 213, 409, 559, 700, 1075, 1105, 1531, 1591, 1741
AluI AGCT 9 cut(s) 213, 409, 559, 700, 1075, 1105, 1531, 1591, 1741
Alw21I GWGCWC 1 cut(s) 1515
Alw26I GTCTC 8 cut(s) 69, 130, 335, 446, 566, 1034, 1238, 1869
AlwI GGATC 1 cut(s) 162
AlwNI CAGNNNCTG 3 cut(s) 1095, 1321, 1938
Ama87I CYCGRG 3 cut(s) 443, 1397, 1695
AoxI GGCC 5 cut(s) 109, 309, 616, 1153, 1766
ApeKI GCWGC 2 cut(s) 1007, 1296
ApoI RAATTY 3 cut(s) 58, 1345, 1392
ArsI GACNNNNNNTTYG 2 cut(s) 1828, 1860
AseI ATTAAT 1 cut(s) 1433
Asp700I GAANNNNTTC 1 cut(s) 1365
AspS9I GGNCC 5 cut(s) 97, 310, 825, 1092, 1766
AsuHPI GGTGA 3 cut(s) 1013, 1664, 1792
AvaI CYCGRG 3 cut(s) 443, 1397, 1695
AvaII GGWCC 3 cut(s) 97, 825, 1092
BaeGI GKGCMC 1 cut(s) 1798
BarI GAAGNNNNNNTAC 4 cut(s) 1094, 1126, 1431, 1463
BbrPI CACGTG 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 1515
BbvCI CCTCAGC 1 cut(s) 1322
BbvI GCAGC 2 cut(s) 994, 1308
BccI CCATC 2 cut(s) 1168, 1184
BcgI CGANNNNNNTGC 2 cut(s) 424, 458
BciT130I CCWGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
BciVI GTATCC 2 cut(s) 947, 1234
BclI TGATCA 1 cut(s) 1408
BcoDI GTCTC 8 cut(s) 69, 130, 335, 446, 566, 1034, 1238, 1869
BfaI CTAG 2 cut(s) 837, 1607
BfmI CTRYAG 3 cut(s) 643, 906, 1955
BfuAI ACCTGC 1 cut(s) 1946
BfuI GTATCC 2 cut(s) 947, 1234
BglI GCCNNNNNGGC 1 cut(s) 615
BglII AGATCT 3 cut(s) 316, 349, 764
BisI GCNGC 2 cut(s) 1008, 1297
BlsI GCNGC 2 cut(s) 1009, 1298
BmcAI AGTACT 2 cut(s) 815, 1706
Bme1390I CCNGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
Bme18I GGWCC 3 cut(s) 97, 825, 1092
BmeRI GACNNNNNGTC 1 cut(s) 156
BmeT110I CYCGRG 3 cut(s) 443, 1397, 1695
BmgT120I GGNCC 5 cut(s) 97, 310, 825, 1092, 1766
BmiI GGNNCC 1 cut(s) 312
BmrFI CCNGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
BmrI ACTGGG 1 cut(s) 162
BmsI GCATC 5 cut(s) 596, 896, 1095, 1200, 1308
BmuI ACTGGG 1 cut(s) 162
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 2 cut(s) 1226, 1262
Bpu10I CCTNAGC 1 cut(s) 1322
BpuEI CTTGAG 3 cut(s) 154, 359, 1763
BsaAI YACGTR 1 cut(s) 117
BsaJI CCNNGG 2 cut(s) 744, 1769
BsaWI WCCGGW 2 cut(s) 939, 1519
BsaXI ACNNNNNCTCC 2 cut(s) 1199, 1229
Bsc4I CCNNNNNNNGG 1 cut(s) 1874
Bse1I ACTGG 4 cut(s) 157, 1245, 1917, 1930
BseBI CCWGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
BseDI CCNNGG 2 cut(s) 744, 1769
BseGI GGATG 5 cut(s) 365, 611, 719, 926, 1183
BseLI CCNNNNNNNGG 1 cut(s) 1874
BseMII CTCAG 6 cut(s) 47, 546, 602, 626, 1043, 1313
BseNI ACTGG 4 cut(s) 157, 1245, 1917, 1930
BseSI GKGCMC 1 cut(s) 1798
BseXI GCAGC 2 cut(s) 994, 1308
BsgI GTGCAG 1 cut(s) 1924
BshFI GGCC 5 cut(s) 111, 311, 618, 1155, 1768
BsiHKAI GWGCWC 1 cut(s) 1515
BsiHKCI CYCGRG 3 cut(s) 443, 1397, 1695
BsiSI CCGG 2 cut(s) 940, 1520
BslFI GGGAC 2 cut(s) 673, 1678
BslI CCNNNNNNNGG 1 cut(s) 1874
BsmAI GTCTC 8 cut(s) 69, 130, 335, 446, 566, 1034, 1238, 1869
BsmFI GGGAC 2 cut(s) 673, 1678
BsnI GGCC 5 cut(s) 111, 311, 618, 1155, 1768
BsoBI CYCGRG 3 cut(s) 443, 1397, 1695
Bsp1286I GDGCHC 2 cut(s) 1515, 1798
Bsp1407I TGTACA 1 cut(s) 1438
Bsp143I GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
BspACI CCGC 1 cut(s) 1791
BspANI GGCC 5 cut(s) 111, 311, 618, 1155, 1768
BspCNI CTCAG 6 cut(s) 46, 547, 603, 627, 1044, 1314
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 1 cut(s) 312
BspMI ACCTGC 1 cut(s) 1946
BspPI GGATC 1 cut(s) 162
BsrGI TGTACA 1 cut(s) 1438
BsrI ACTGG 4 cut(s) 157, 1245, 1917, 1930
BssECI CCNNGG 2 cut(s) 744, 1769
BssMI GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
Bst2UI CCWGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
Bst4CI ACNGT 6 cut(s) 644, 910, 1045, 1730, 1877, 1956
BstAPI GCANNNNNTGC 2 cut(s) 1819, 1938
BstAUI TGTACA 1 cut(s) 1438
BstBAI YACGTR 1 cut(s) 117
BstC8I GCNNGC 2 cut(s) 885, 1629
BstF5I GGATG 5 cut(s) 365, 611, 719, 926, 1183
BstKTI GATC 7 cut(s) 170, 319, 352, 767, 895, 1411, 1672
BstMAI GTCTC 8 cut(s) 69, 130, 335, 446, 566, 1034, 1238, 1869
BstMBI GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
BstMWI GCNNNNNNNGC 5 cut(s) 615, 666, 1499, 1819, 1938
BstNI CCWGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
BstNSI RCATGY 1 cut(s) 1822
BstSCI CCNGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
BstSFI CTRYAG 3 cut(s) 643, 906, 1955
BstSLI GKGCMC 1 cut(s) 1798
BstV1I GCAGC 2 cut(s) 994, 1308
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 4 cut(s) 167, 316, 349, 764
BstYI RGATCY 4 cut(s) 167, 316, 349, 764
BsuI GTATCC 2 cut(s) 947, 1234
BsuRI GGCC 5 cut(s) 111, 311, 618, 1155, 1768
BtsCI GGATG 5 cut(s) 365, 611, 719, 926, 1183
BtsIMutI CAGTG 3 cut(s) 41, 915, 1924
BveI ACCTGC 1 cut(s) 1946
Cac8I GCNNGC 2 cut(s) 885, 1629
CaiI CAGNNNCTG 3 cut(s) 1095, 1321, 1938
CciI TCATGA 1 cut(s) 1507
Cfr13I GGNCC 5 cut(s) 97, 310, 825, 1092, 1766
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 8 cut(s) 814, 873, 924, 1111, 1439, 1705, 1713, 1923
CviAII CATG 4 cut(s) 822, 931, 1508, 1819
CviQI GTAC 8 cut(s) 814, 873, 924, 1111, 1439, 1705, 1713, 1923
DpnI GATC 7 cut(s) 169, 318, 351, 766, 894, 1410, 1671
DpnII GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
DriI GACNNNNNGTC 1 cut(s) 156
Eam1105I GACNNNNNGTC 1 cut(s) 156
Eco147I AGGCCT 2 cut(s) 111, 1155
Eco47I GGWCC 3 cut(s) 97, 825, 1092
Eco57I CTGAAG 3 cut(s) 1091, 1607, 1796
Eco72I CACGTG 1 cut(s) 117
Eco88I CYCGRG 3 cut(s) 443, 1397, 1695
EcoO109I RGGNCCY 2 cut(s) 310, 1092
EcoRI GAATTC 1 cut(s) 1392
EcoRII CCWGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
FaeI CATG 4 cut(s) 825, 934, 1511, 1822
FaqI GGGAC 2 cut(s) 673, 1678
FatI CATG 4 cut(s) 821, 930, 1507, 1818
FauI CCCGC 1 cut(s) 1784
FauNDI CATATG 1 cut(s) 1870
FbaI TGATCA 1 cut(s) 1408
Fnu4HI GCNGC 2 cut(s) 1008, 1297
FokI GGATG 5 cut(s) 372, 618, 726, 913, 1190
Fsp4HI GCNGC 2 cut(s) 1008, 1297
FspBI CTAG 2 cut(s) 837, 1607
GluI GCNGC 2 cut(s) 1008, 1297
GsuI CTGGAG 2 cut(s) 1226, 1262
HaeIII GGCC 5 cut(s) 111, 311, 618, 1155, 1768
HapII CCGG 2 cut(s) 940, 1520
HgaI GACGC 1 cut(s) 1013
Hin1II CATG 4 cut(s) 825, 934, 1511, 1822
HindIII AAGCTT 3 cut(s) 407, 1073, 1103
HpaII CCGG 2 cut(s) 940, 1520
HphI GGTGA 3 cut(s) 1013, 1664, 1792
Hpy166II GTNNAC 2 cut(s) 97, 1441
Hpy188I TCNGA 8 cut(s) 556, 636, 892, 1053, 1317, 1587, 1669, 1803
Hpy8I GTNNAC 2 cut(s) 97, 1441
Hpy99I CGWCG 1 cut(s) 1360
HpyCH4III ACNGT 6 cut(s) 644, 910, 1045, 1730, 1877, 1956
HpyCH4IV ACGT 3 cut(s) 116, 790, 1540
HpyF10VI GCNNNNNNNGC 5 cut(s) 615, 666, 1499, 1819, 1938
HpySE526I ACGT 3 cut(s) 116, 790, 1540
Hsp92II CATG 4 cut(s) 825, 934, 1511, 1822
Ksp22I TGATCA 1 cut(s) 1408
Kzo9I GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
LmnI GCTCC 1 cut(s) 248
Lsp1109I GCAGC 2 cut(s) 994, 1308
LweI GCATC 5 cut(s) 596, 896, 1095, 1200, 1308
MaeI CTAG 2 cut(s) 837, 1607
MaeII ACGT 3 cut(s) 116, 790, 1540
MaeIII GTNAC 3 cut(s) 362, 986, 1001
MalI GATC 7 cut(s) 169, 318, 351, 766, 894, 1410, 1671
MboI GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
MboII GAAGA 3 cut(s) 68, 1191, 1428
MfeI CAATTG 2 cut(s) 600, 1267
MflI RGATCY 4 cut(s) 167, 316, 349, 764
MhlI GDGCHC 2 cut(s) 1515, 1798
MlyI GAGTC 6 cut(s) 132, 448, 590, 695, 1673, 1852
MmeI TCCRAC 1 cut(s) 1041
MnlI CCTC 6 cut(s) 122, 182, 1089, 1176, 1317, 1757
MroXI GAANNNNTTC 1 cut(s) 1365
MspI CCGG 2 cut(s) 940, 1520
MspR9I CCNGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
MunI CAATTG 2 cut(s) 600, 1267
MvaI CCWGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
MwoI GCNNNNNNNGC 5 cut(s) 615, 666, 1499, 1819, 1938
NdeI CATATG 1 cut(s) 1870
NdeII GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
NlaIII CATG 4 cut(s) 825, 934, 1511, 1822
NlaIV GGNNCC 1 cut(s) 312
NmuCI GTSAC 1 cut(s) 1001
NspI RCATGY 1 cut(s) 1822
PaeR7I CTCGAG 1 cut(s) 443
PagI TCATGA 1 cut(s) 1507
PceI AGGCCT 2 cut(s) 111, 1155
PdmI GAANNNNTTC 1 cut(s) 1365
PfeI GAWTC 6 cut(s) 40, 448, 473, 520, 631, 1897
PfoI TCCNGGA 2 cut(s) 141, 1381
PkrI GCNGC 2 cut(s) 1009, 1298
PleI GAGTC 6 cut(s) 132, 447, 590, 694, 1672, 1851
PmaCI CACGTG 1 cut(s) 117
PmlI CACGTG 1 cut(s) 117
PpsI GAGTC 6 cut(s) 132, 447, 590, 694, 1672, 1851
Ppu21I YACGTR 1 cut(s) 117
PpuMI RGGWCCY 1 cut(s) 1092
PshBI ATTAAT 1 cut(s) 1433
Psp5II RGGWCCY 1 cut(s) 1092
Psp6I CCWGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
PspCI CACGTG 1 cut(s) 117
PspGI CCWGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
PspN4I GGNNCC 1 cut(s) 312
PspPI GGNCC 5 cut(s) 97, 310, 825, 1092, 1766
PspPPI RGGWCCY 1 cut(s) 1092
PstNI CAGNNNCTG 3 cut(s) 1095, 1321, 1938
PsuI RGATCY 4 cut(s) 167, 316, 349, 764
RsaI GTAC 8 cut(s) 815, 874, 925, 1112, 1440, 1706, 1714, 1924
RsaNI GTAC 8 cut(s) 814, 873, 924, 1111, 1439, 1705, 1713, 1923
SatI GCNGC 2 cut(s) 1008, 1297
Sau3AI GATC 7 cut(s) 167, 316, 349, 764, 892, 1408, 1669
Sau96I GGNCC 5 cut(s) 97, 310, 825, 1092, 1766
ScaI AGTACT 2 cut(s) 815, 1706
SchI GAGTC 6 cut(s) 132, 448, 590, 695, 1673, 1852
ScrFI CCNGG 7 cut(s) 143, 308, 745, 1383, 1452, 1658, 1770
SduI GDGCHC 2 cut(s) 1515, 1798
SfaNI GCATC 5 cut(s) 596, 896, 1095, 1200, 1308
SfcI CTRYAG 3 cut(s) 643, 906, 1955
Sfr274I CTCGAG 1 cut(s) 443
SinI GGWCC 3 cut(s) 97, 825, 1092
SlaI CTCGAG 1 cut(s) 443
SmlI CTYRAG 4 cut(s) 133, 338, 443, 1742
SmoI CTYRAG 4 cut(s) 133, 338, 443, 1742
SseBI AGGCCT 2 cut(s) 111, 1155
SsiI CCGC 1 cut(s) 1791
SspMI CTAG 2 cut(s) 837, 1607
StuI AGGCCT 2 cut(s) 111, 1155
StyD4I CCNGG 7 cut(s) 141, 306, 743, 1381, 1450, 1656, 1768
TaaI ACNGT 6 cut(s) 644, 910, 1045, 1730, 1877, 1956
TaiI ACGT 3 cut(s) 119, 793, 1543
TaqI TCGA 4 cut(s) 231, 444, 1414, 1900
TatI WGTACW 5 cut(s) 813, 923, 1110, 1438, 1704
TfiI GAWTC 6 cut(s) 40, 448, 473, 520, 631, 1897
TscAI CASTG 3 cut(s) 41, 915, 1924
TseFI GTSAC 1 cut(s) 1001
TseI GCWGC 2 cut(s) 1007, 1296
Tsp45I GTSAC 1 cut(s) 1001
TspDTI ATGAA 8 cut(s) 210, 265, 320, 371, 800, 1252, 1419, 1496
TspGWI ACGGA 1 cut(s) 1373
TspRI CASTG 3 cut(s) 41, 915, 1924
VpaK11BI GGWCC 3 cut(s) 97, 825, 1092
VspI ATTAAT 1 cut(s) 1433
XapI RAATTY 3 cut(s) 58, 1345, 1392
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 1 cut(s) 1822
XhoI CTCGAG 1 cut(s) 443
XmnI GAANNNNTTC 1 cut(s) 1365
XspI CTAG 2 cut(s) 837, 1607
ZrmI AGTACT 2 cut(s) 815, 1706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.