TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 16 - 138 | 1.4e-09 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 635 |
| AcsI | RAATTY | 2 cut(s) | 131, 236 |
| AcuI | CTGAAG | 2 cut(s) | 194, 386 |
| AfaI | GTAC | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 493 |
| AgsI | TTSAA | 5 cut(s) | 38, 136, 347, 421, 535 |
| AjnI | CCWGG | 1 cut(s) | 49 |
| AluBI | AGCT | 3 cut(s) | 118, 178, 580 |
| AluI | AGCT | 3 cut(s) | 118, 178, 580 |
| Alw26I | GTCTC | 1 cut(s) | 459 |
| AlwI | GGATC | 1 cut(s) | 635 |
| AoxI | GGCC | 1 cut(s) | 356 |
| ApoI | RAATTY | 2 cut(s) | 131, 236 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 33 |
| AspS9I | GGNCC | 1 cut(s) | 356 |
| AsuHPI | GGTGA | 2 cut(s) | 251, 382 |
| BaeGI | GKGCMC | 1 cut(s) | 96 |
| BauI | CACGAG | 1 cut(s) | 282 |
| BccI | CCATC | 3 cut(s) | 87, 176, 690 |
| BciT130I | CCWGG | 1 cut(s) | 51 |
| BcoDI | GTCTC | 1 cut(s) | 459 |
| BfaI | CTAG | 1 cut(s) | 606 |
| Bme1390I | CCNGG | 1 cut(s) | 51 |
| BmgT120I | GGNCC | 1 cut(s) | 356 |
| BmrFI | CCNGG | 1 cut(s) | 51 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 493 |
| Bse1I | ACTGG | 3 cut(s) | 487, 503, 553 |
| Bse3DI | GCAATG | 1 cut(s) | 600 |
| BseBI | CCWGG | 1 cut(s) | 51 |
| BseGI | GGATG | 3 cut(s) | 211, 456, 571 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 493 |
| BseMI | GCAATG | 1 cut(s) | 600 |
| BseMII | CTCAG | 1 cut(s) | 612 |
| BseNI | ACTGG | 3 cut(s) | 487, 503, 553 |
| BseSI | GKGCMC | 1 cut(s) | 96 |
| BshFI | GGCC | 1 cut(s) | 358 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 493 |
| BsmAI | GTCTC | 1 cut(s) | 459 |
| BsnI | GGCC | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 1 cut(s) | 96 |
| Bsp143I | GATC | 3 cut(s) | 256, 568, 627 |
| BspANI | GGCC | 1 cut(s) | 358 |
| BspCNI | CTCAG | 1 cut(s) | 613 |
| BspHI | TCATGA | 1 cut(s) | 630 |
| BspPI | GGATC | 1 cut(s) | 635 |
| BsrDI | GCAATG | 1 cut(s) | 600 |
| BsrI | ACTGG | 3 cut(s) | 487, 503, 553 |
| BssMI | GATC | 3 cut(s) | 256, 568, 627 |
| BssSI | CACGAG | 1 cut(s) | 282 |
| Bst2BI | CACGAG | 1 cut(s) | 282 |
| Bst2UI | CCWGG | 1 cut(s) | 51 |
| Bst4CI | ACNGT | 1 cut(s) | 320 |
| Bst6I | CTCTTC | 1 cut(s) | 181 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 409, 524 |
| BstDEI | CTNAG | 1 cut(s) | 621 |
| BstF5I | GGATG | 3 cut(s) | 211, 456, 571 |
| BstKTI | GATC | 3 cut(s) | 259, 571, 630 |
| BstMAI | GTCTC | 1 cut(s) | 459 |
| BstMBI | GATC | 3 cut(s) | 256, 568, 627 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 409, 515, 524 |
| BstNI | CCWGG | 1 cut(s) | 51 |
| BstSCI | CCNGG | 1 cut(s) | 49 |
| BstSLI | GKGCMC | 1 cut(s) | 96 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 86 |
| BsuRI | GGCC | 1 cut(s) | 358 |
| BtgZI | GCGATG | 1 cut(s) | 668 |
| BtsCI | GGATG | 3 cut(s) | 211, 456, 571 |
| BtsI | GCAGTG | 2 cut(s) | 451, 516 |
| BtsIMutI | CAGTG | 3 cut(s) | 451, 510, 516 |
| CciI | TCATGA | 1 cut(s) | 630 |
| Cfr13I | GGNCC | 1 cut(s) | 356 |
| Csp6I | GTAC | 1 cut(s) | 300 |
| CviAII | CATG | 1 cut(s) | 631 |
| CviJI | RGCY | 7 cut(s) | 78, 118, 178, 268, 358, 580, 638 |
| CviKI_1 | RGCY | 7 cut(s) | 78, 118, 178, 268, 358, 580, 638 |
| CviQI | GTAC | 1 cut(s) | 300 |
| DdeI | CTNAG | 1 cut(s) | 621 |
| DpnI | GATC | 3 cut(s) | 258, 570, 629 |
| DpnII | GATC | 3 cut(s) | 256, 568, 627 |
| DraI | TTTAAA | 1 cut(s) | 643 |
| Eam1104I | CTCTTC | 1 cut(s) | 181 |
| EarI | CTCTTC | 1 cut(s) | 181 |
| Eco57I | CTGAAG | 2 cut(s) | 194, 386 |
| EcoRI | GAATTC | 1 cut(s) | 131 |
| EcoRII | CCWGG | 1 cut(s) | 49 |
| FaeI | CATG | 1 cut(s) | 634 |
| FatI | CATG | 1 cut(s) | 630 |
| FokI | GGATG | 3 cut(s) | 198, 463, 578 |
| FspBI | CTAG | 1 cut(s) | 606 |
| HaeIII | GGCC | 1 cut(s) | 358 |
| Hin1II | CATG | 1 cut(s) | 634 |
| HindIII | AAGCTT | 1 cut(s) | 116 |
| HinfI | GANTC | 2 cut(s) | 12, 384 |
| HphI | GGTGA | 2 cut(s) | 251, 382 |
| Hpy188I | TCNGA | 5 cut(s) | 84, 256, 366, 393, 573 |
| Hpy188III | TCNNGA | 4 cut(s) | 65, 136, 284, 631 |
| HpyAV | CCTTC | 3 cut(s) | 361, 367, 628 |
| HpyCH4III | ACNGT | 1 cut(s) | 320 |
| HpyCH4V | TGCA | 9 cut(s) | 149, 218, 243, 324, 412, 493, 527, 600, 611 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 409, 515, 524 |
| HpyF3I | CTNAG | 1 cut(s) | 621 |
| Hsp92II | CATG | 1 cut(s) | 634 |
| Kzo9I | GATC | 3 cut(s) | 256, 568, 627 |
| MaeI | CTAG | 1 cut(s) | 606 |
| MalI | GATC | 3 cut(s) | 258, 570, 629 |
| MboI | GATC | 3 cut(s) | 256, 568, 627 |
| MboII | GAAGA | 3 cut(s) | 198, 245, 547 |
| MhlI | GDGCHC | 1 cut(s) | 96 |
| MluCI | AATT | 7 cut(s) | 39, 45, 131, 191, 236, 538, 615 |
| MlyI | GAGTC | 1 cut(s) | 393 |
| MnlI | CCTC | 2 cut(s) | 457, 618 |
| MroXI | GAANNNNTTC | 1 cut(s) | 33 |
| MseI | TTAA | 4 cut(s) | 144, 249, 642, 700 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 687 |
| MspR9I | CCNGG | 1 cut(s) | 51 |
| MvaI | CCWGG | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 409, 515, 524 |
| NdeII | GATC | 3 cut(s) | 256, 568, 627 |
| NlaIII | CATG | 1 cut(s) | 634 |
| PagI | TCATGA | 1 cut(s) | 630 |
| PdmI | GAANNNNTTC | 1 cut(s) | 33 |
| PfeI | GAWTC | 1 cut(s) | 12 |
| PfoI | TCCNGGA | 1 cut(s) | 49 |
| PleI | GAGTC | 1 cut(s) | 392 |
| PpsI | GAGTC | 1 cut(s) | 392 |
| Psp6I | CCWGG | 1 cut(s) | 49 |
| PspGI | CCWGG | 1 cut(s) | 49 |
| PspPI | GGNCC | 1 cut(s) | 356 |
| RsaI | GTAC | 1 cut(s) | 301 |
| RsaNI | GTAC | 1 cut(s) | 300 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 687 |
| SaqAI | TTAA | 4 cut(s) | 144, 249, 642, 700 |
| Sau3AI | GATC | 3 cut(s) | 256, 568, 627 |
| Sau96I | GGNCC | 1 cut(s) | 356 |
| SchI | GAGTC | 1 cut(s) | 393 |
| ScrFI | CCNGG | 1 cut(s) | 51 |
| SduI | GDGCHC | 1 cut(s) | 96 |
| SetI | ASST | 7 cut(s) | 120, 180, 249, 264, 372, 582, 673 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 687 |
| Sse9I | AATT | 7 cut(s) | 39, 45, 131, 191, 236, 538, 615 |
| SspI | AATATT | 1 cut(s) | 61 |
| SspMI | CTAG | 1 cut(s) | 606 |
| StyD4I | CCNGG | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 320 |
| TaqI | TCGA | 1 cut(s) | 180 |
| TasI | AATT | 7 cut(s) | 39, 45, 131, 191, 236, 538, 615 |
| TfiI | GAWTC | 1 cut(s) | 12 |
| Tru1I | TTAA | 4 cut(s) | 144, 249, 642, 700 |
| Tru9I | TTAA | 4 cut(s) | 144, 249, 642, 700 |
| TscAI | CASTG | 3 cut(s) | 451, 510, 516 |
| TspDTI | ATGAA | 3 cut(s) | 144, 647, 675 |
| TspGWI | ACGGA | 1 cut(s) | 377 |
| TspRI | CASTG | 3 cut(s) | 451, 510, 516 |
| XapI | RAATTY | 2 cut(s) | 131, 236 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 1 cut(s) | 33 |
| XspI | CTAG | 1 cut(s) | 606 |