Rw6G003380

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000105
Physical Location & Seq
Forward (+)
5352141 .. 5355883
3743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G003380.1

Sequence Viewer

Length: 1341 bp
ATGGAAAAGTTGCTTTCTTCTCATTGGGTGGCCGAAAGATTCGATCCCTGCTTTTATTTAACAAAAAAAGAAAAATTGGAACAATTAGAAAAATTGGCTGGAAGTCGCAACTGGTTCGGTCCAGGGAGCAGAATTATCATAACAACCACGGATATTCACTTGTTAGAGGCACATGATGTTGATGCTACATACAAGGCTACCGTGTTAAATTCTGGTGAAGCTCTTCAACTATTGAGTTTAAAGGCTTTCAAGAAAAGCTTCCCACCAAAAAATTATTTGGACCTGTGCTACCATATTTTAGGGTATGCTCAGGGGCTGCCGTTAGCTCTTGTGGTTTTAGGTTCTTTTTTATGTGGTAGAAAGCACAATGAATGGGCAAGCGCAATTGATAGGCTAAAAAATACACCAAATAGAGGAATTATGGATGGGAAAGATTGGGATCGTGTGACACAAATACTAGACTATTGTGACCTGAATCCTGAAATTGGATTACGTGTTCTTGTTGATAAATCTCTCATTACTACTTCCAGCAATGAACTGTCAATGCATGATTTGCTACAAGAAATGGGCTGGGAAATAGTTCGTCGAGAGTCTCGTGATGAGCCAGGCAAACGTAGTAGTAACTGCACAAATCTTGTTCGTCTTCCAAGAACCATCAATAATTTGAAGTTTGTTGAAAATCTTAATCTTTCTGGATGCATGAAACTTGGCAAACATCGGGACAGCATGGAGGAGATGGACTGTTATGAGGAAAATGATGTGAATAGTGGGTCTCTGGCAGAAATGTCATCTACCCGTGATCTCATAAAATATGTGAGAGGTCCAATCATTCATGGATGCAAAGTAGTTGGGGGATTTTTAAATAAGTTCTTGCCTTCTGAATTGGTGCAAAAAGTGAATACAGAGCCAATGAGTCTCCACTTGCCTATATCGGGTCTGTGTAATTTAACATGTCTGAACCTGAGTAATTGCAATCTTGGTGAAGGAGCATTTGCCAATGAATTTGGTTACTTTCCCTCTTTGGTGACCTTGAATCTAAGTGGAAACAATTTTGTTCGTCTTCCTTCAGGCATTAGATTGCTTTCTAAGCTTGAGAACTTTAACGTGGAGAATTGCAAGAGACTTGAAGAGTTGTCAGACCTTCCATCAAATAGTATCCTAGATTTAAGGGCAGATGGTTGTACTTTGCTGAAATACTTGTTTGATGCATCAAACTTGAACAGATTAAACAAATCATATTTCAATTTCATCAATTGCGTCAATATAAATGGCAATCAAGGATGCAATAACATAGCATTTGAAATGCTGAAGACATTCATGTATCAGGTACTCCCTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR

Protein Analysis

446

Amino Acids

50.32

Weight (kDa)

6.52

Isoelectric Point (pI)

35.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_ROQ1 PF23282 147 - 198 6.9e-13 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 38, 447
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 2 cut(s) 208, 1001
AcuI CTGAAG 2 cut(s) 1050, 1328
AfaI GTAC 2 cut(s) 1183, 1329
AfiI CCNNNNNNNGG 3 cut(s) 413, 485, 932
AflIII ACRYGT 2 cut(s) 493, 950
AgsI TTSAA 9 cut(s) 227, 250, 667, 677, 1033, 1127, 1219, 1243, 1301
AjnI CCWGG 2 cut(s) 121, 604
AloI GAACNNNNNNTCC 2 cut(s) 480, 512
AluBI AGCT 4 cut(s) 221, 258, 326, 1090
AluI AGCT 4 cut(s) 221, 258, 326, 1090
Alw26I GTCTC 4 cut(s) 597, 777, 920, 1114
AlwI GGATC 2 cut(s) 38, 447
AlwNI CAGNNNCTG 1 cut(s) 316
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 1 cut(s) 316
ApoI RAATTY 2 cut(s) 208, 1001
Asp700I GAANNNNTTC 4 cut(s) 222, 257, 579, 1313
AspLEI GCGC 1 cut(s) 383
AspS9I GGNCC 3 cut(s) 119, 280, 821
AsuHPI GGTGA 3 cut(s) 227, 992, 1036
AvaII GGWCC 3 cut(s) 119, 280, 821
BauI CACGAG 1 cut(s) 594
BbsI GAAGAC 3 cut(s) 635, 1052, 1316
BbvI GCAGC 1 cut(s) 303
BccI CCATC 5 cut(s) 419, 662, 730, 1153, 1169
BceAI ACGGC 1 cut(s) 304
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 2 cut(s) 123, 606
BciVI GTATCC 1 cut(s) 1166
BcoDI GTCTC 4 cut(s) 597, 777, 920, 1114
BfaI CTAG 2 cut(s) 458, 1160
BfuI GTATCC 1 cut(s) 1166
BisI GCNGC 1 cut(s) 317
BlsI GCNGC 1 cut(s) 318
Bme1390I CCNGG 2 cut(s) 123, 606
Bme18I GGWCC 3 cut(s) 119, 280, 821
BmgT120I GGNCC 3 cut(s) 119, 280, 821
BmrFI CCNGG 2 cut(s) 123, 606
BmsI GCATC 6 cut(s) 172, 686, 827, 1195, 1217, 1271
BpiI GAAGAC 3 cut(s) 635, 1052, 1316
Bpu10I CCTNAGC 1 cut(s) 309
BpuEI CTTGAG 1 cut(s) 1112
BsaAI YACGTR 1 cut(s) 494
BsaBI GATNNNNATC 1 cut(s) 438
BsaI GGTCTC 1 cut(s) 777
BsaJI CCNNGG 2 cut(s) 122, 147
Bsc4I CCNNNNNNNGG 3 cut(s) 413, 485, 932
Bse1I ACTGG 1 cut(s) 116
Bse3DI GCAATG 1 cut(s) 538
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 2 cut(s) 123, 606
BseDI CCNNGG 2 cut(s) 122, 147
BseGI GGATG 4 cut(s) 430, 701, 842, 1286
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 3 cut(s) 413, 485, 932
BseMI GCAATG 1 cut(s) 538
BseMII CTCAG 2 cut(s) 323, 953
BseNI ACTGG 1 cut(s) 116
BseRI GAGGAG 1 cut(s) 746
BseXI GCAGC 1 cut(s) 303
BseYI CCCAGC 1 cut(s) 570
BsgI GTGCAG 1 cut(s) 610
BshFI GGCC 1 cut(s) 32
BslFI GGGAC 1 cut(s) 734
BslI CCNNNNNNNGG 3 cut(s) 413, 485, 932
BsmAI GTCTC 4 cut(s) 597, 777, 920, 1114
BsmFI GGGAC 1 cut(s) 734
BsnI GGCC 1 cut(s) 32
Bso31I GGTCTC 1 cut(s) 777
Bsp143I GATC 3 cut(s) 43, 439, 799
BspANI GGCC 1 cut(s) 32
BspCNI CTCAG 2 cut(s) 322, 954
BspPI GGATC 2 cut(s) 38, 447
BspQI GCTCTTC 1 cut(s) 228
BspTNI GGTCTC 1 cut(s) 777
BsrDI GCAATG 1 cut(s) 538
BsrI ACTGG 1 cut(s) 116
BssECI CCNNGG 2 cut(s) 122, 147
BssMI GATC 3 cut(s) 43, 439, 799
BssSI CACGAG 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 594
Bst2UI CCWGG 2 cut(s) 123, 606
Bst4CI ACNGT 3 cut(s) 202, 540, 743
Bst6I CTCTTC 2 cut(s) 228, 1122
BstAPI GCANNNNNTGC 1 cut(s) 553
BstBAI YACGTR 1 cut(s) 494
BstC8I GCNNGC 1 cut(s) 379
BstDEI CTNAG 4 cut(s) 309, 962, 1037, 1086
BstDSI CCRYGG 1 cut(s) 147
BstEII GGTNACC 1 cut(s) 1024
BstF5I GGATG 4 cut(s) 430, 701, 842, 1286
BstHHI GCGC 1 cut(s) 383
BstKTI GATC 3 cut(s) 46, 442, 802
BstMAI GTCTC 4 cut(s) 597, 777, 920, 1114
BstMBI GATC 3 cut(s) 43, 439, 799
BstMWI GCNNNNNNNGC 2 cut(s) 553, 1087
BstNI CCWGG 2 cut(s) 123, 606
BstNSI RCATGY 1 cut(s) 954
BstPI GGTNACC 1 cut(s) 1024
BstSCI CCNGG 2 cut(s) 121, 604
BstV1I GCAGC 1 cut(s) 303
BstV2I GAAGAC 3 cut(s) 635, 1052, 1316
BsuI GTATCC 1 cut(s) 1166
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 4 cut(s) 430, 701, 842, 1286
Cac8I GCNNGC 1 cut(s) 379
CaiI CAGNNNCTG 1 cut(s) 316
CfoI GCGC 1 cut(s) 383
Cfr13I GGNCC 3 cut(s) 119, 280, 821
CseI GACGC 1 cut(s) 1246
Csp6I GTAC 2 cut(s) 1182, 1328
CviAII CATG 7 cut(s) 173, 548, 700, 727, 833, 951, 1318
CviQI GTAC 2 cut(s) 1182, 1328
DdeI CTNAG 4 cut(s) 309, 962, 1037, 1086
DpnI GATC 3 cut(s) 45, 441, 801
DpnII GATC 3 cut(s) 43, 439, 799
DraI TTTAAA 2 cut(s) 240, 861
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 2 cut(s) 228, 1122
EarI CTCTTC 2 cut(s) 228, 1122
Eco31I GGTCTC 1 cut(s) 777
Eco47I GGWCC 3 cut(s) 119, 280, 821
Eco57I CTGAAG 2 cut(s) 1050, 1328
Eco91I GGTNACC 1 cut(s) 1024
EcoO65I GGTNACC 1 cut(s) 1024
EcoRII CCWGG 2 cut(s) 121, 604
EcoT22I ATGCAT 3 cut(s) 549, 701, 1210
FaeI CATG 7 cut(s) 176, 551, 703, 730, 836, 954, 1321
FalI AAGNNNNNCTT 2 cut(s) 242, 274
FaqI GGGAC 1 cut(s) 734
FatI CATG 7 cut(s) 172, 547, 699, 726, 832, 950, 1317
Fnu4HI GCNGC 1 cut(s) 317
FokI GGATG 4 cut(s) 437, 708, 849, 1293
Fsp4HI GCNGC 1 cut(s) 317
FspBI CTAG 2 cut(s) 458, 1160
GlaI GCGC 1 cut(s) 382
GluI GCNGC 1 cut(s) 317
GsaI CCCAGC 1 cut(s) 574
HaeIII GGCC 1 cut(s) 32
HgaI GACGC 1 cut(s) 1246
HhaI GCGC 1 cut(s) 383
Hin1II CATG 7 cut(s) 176, 551, 703, 730, 836, 954, 1321
Hin6I GCGC 1 cut(s) 381
HinP1I GCGC 1 cut(s) 381
HindIII AAGCTT 2 cut(s) 256, 1088
HinfI GANTC 5 cut(s) 39, 475, 590, 913, 1033
HphI GGTGA 3 cut(s) 227, 992, 1036
Hpy188I TCNGA 3 cut(s) 880, 957, 1138
Hpy188III TCNNGA 6 cut(s) 250, 479, 587, 596, 693, 719
Hpy99I CGWCG 1 cut(s) 588
HpyAV CCTTC 4 cut(s) 885, 977, 1074, 1151
HpyCH4III ACNGT 3 cut(s) 202, 540, 743
HpyCH4IV ACGT 3 cut(s) 493, 613, 1104
HpyCH4V TGCA 9 cut(s) 547, 627, 699, 840, 889, 972, 1116, 1208, 1284
HpyF10VI GCNNNNNNNGC 2 cut(s) 553, 1087
HpyF3I CTNAG 4 cut(s) 309, 962, 1037, 1086
HpySE526I ACGT 3 cut(s) 493, 613, 1104
Hsp92II CATG 7 cut(s) 176, 551, 703, 730, 836, 954, 1321
HspAI GCGC 1 cut(s) 381
Kzo9I GATC 3 cut(s) 43, 439, 799
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 2 cut(s) 126, 986
Lsp1109I GCAGC 1 cut(s) 303
LweI GCATC 6 cut(s) 172, 686, 827, 1195, 1217, 1271
MaeI CTAG 2 cut(s) 458, 1160
MaeII ACGT 3 cut(s) 493, 613, 1104
MaeIII GTNAC 5 cut(s) 445, 467, 620, 1007, 1024
MalI GATC 3 cut(s) 45, 441, 801
MboI GATC 3 cut(s) 43, 439, 799
MboII GAAGA 6 cut(s) 9, 215, 635, 1052, 1139, 1321
MfeI CAATTG 2 cut(s) 384, 1252
MlyI GAGTC 2 cut(s) 599, 922
MnlI CCTC 6 cut(s) 160, 407, 724, 742, 812, 1027
Mph1103I ATGCAT 3 cut(s) 549, 701, 1210
MroXI GAANNNNTTC 4 cut(s) 222, 257, 579, 1313
MseI TTAA 9 cut(s) 59, 206, 239, 684, 860, 947, 1101, 1166, 1226
MspR9I CCNGG 2 cut(s) 123, 606
MunI CAATTG 2 cut(s) 384, 1252
MvaI CCWGG 2 cut(s) 123, 606
MwoI GCNNNNNNNGC 2 cut(s) 553, 1087
NdeII GATC 3 cut(s) 43, 439, 799
NlaIII CATG 7 cut(s) 176, 551, 703, 730, 836, 954, 1321
NmuCI GTSAC 3 cut(s) 445, 467, 1024
NsiI ATGCAT 3 cut(s) 549, 701, 1210
NspI RCATGY 1 cut(s) 954
PciI ACATGT 1 cut(s) 950
PciSI GCTCTTC 1 cut(s) 228
PcsI WCGNNNNNNNCGW 1 cut(s) 592
PdmI GAANNNNTTC 4 cut(s) 222, 257, 579, 1313
PfeI GAWTC 3 cut(s) 39, 475, 1033
PkrI GCNGC 1 cut(s) 318
PleI GAGTC 2 cut(s) 598, 921
PpsI GAGTC 2 cut(s) 598, 921
Ppu21I YACGTR 1 cut(s) 494
PscI ACATGT 1 cut(s) 950
Psp6I CCWGG 2 cut(s) 121, 604
PspEI GGTNACC 1 cut(s) 1024
PspFI CCCAGC 1 cut(s) 570
PspGI CCWGG 2 cut(s) 121, 604
PspPI GGNCC 3 cut(s) 119, 280, 821
PstNI CAGNNNCTG 1 cut(s) 316
RsaI GTAC 2 cut(s) 1183, 1329
RsaNI GTAC 2 cut(s) 1182, 1328
SapI GCTCTTC 1 cut(s) 228
SaqAI TTAA 9 cut(s) 59, 206, 239, 684, 860, 947, 1101, 1166, 1226
SatI GCNGC 1 cut(s) 317
Sau3AI GATC 3 cut(s) 43, 439, 799
Sau96I GGNCC 3 cut(s) 119, 280, 821
SchI GAGTC 2 cut(s) 599, 922
ScrFI CCNGG 2 cut(s) 123, 606
SfaNI GCATC 6 cut(s) 172, 686, 827, 1195, 1217, 1271
SinI GGWCC 3 cut(s) 119, 280, 821
SmlI CTYRAG 1 cut(s) 1091
SmoI CTYRAG 1 cut(s) 1091
SspMI CTAG 2 cut(s) 458, 1160
StyD4I CCNGG 2 cut(s) 121, 604
TaaI ACNGT 3 cut(s) 202, 540, 743
TaiI ACGT 3 cut(s) 496, 616, 1107
TaqI TCGA 2 cut(s) 42, 586
TaqII GACCGA 1 cut(s) 107
TatI WGTACW 1 cut(s) 1181
TfiI GAWTC 3 cut(s) 39, 475, 1033
Tru1I TTAA 9 cut(s) 59, 206, 239, 684, 860, 947, 1101, 1166, 1226
Tru9I TTAA 9 cut(s) 59, 206, 239, 684, 860, 947, 1101, 1166, 1226
TseFI GTSAC 3 cut(s) 445, 467, 1024
TseI GCWGC 1 cut(s) 316
Tsp45I GTSAC 3 cut(s) 445, 467, 1024
TspDTI ATGAA 7 cut(s) 384, 549, 716, 821, 1014, 1237, 1306
TspGWI ACGGA 1 cut(s) 164
VpaK11BI GGWCC 3 cut(s) 119, 280, 821
XapI RAATTY 2 cut(s) 208, 1001
XceI RCATGY 1 cut(s) 954
XmnI GAANNNNTTC 4 cut(s) 222, 257, 579, 1313
XspI CTAG 2 cut(s) 458, 1160
Zsp2I ATGCAT 3 cut(s) 549, 701, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.