Rmu_sc0007485.1_g000009

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007485.1
OG0000105
Physical Location & Seq
Forward (+)
36513 .. 40698
4186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007485.1_g000009.1.cds

Sequence Viewer

Length: 3591 bp
atggcgtcaacctcttctcgtcgtcaatggaaatacgatgtctttctaagtttcaggggggaagatacccgtaggagttttacgggttatctgtattctgcactaagacagaaaggaattgtcacctttatggatgagccagagcttgagaaaggaaaatccatacggcctgaacttttaggtgcaattgaggactccagatcttcgattgtcattctctcaaagagatatgcttcttcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagagatgggccaacaagtcctccccgtcttctacaaggtggatccttctgatgtgcggcaccaaaggggagattttgagctcaaatgggaaacaaaagtagaagtagaagtaagggaacatgaagaagtttatgagattaatgaggacagactaaatgcctggagagcttctttgacacaggtcgccaatctttctggctgggatttcaacaattatccgttcttcaaagcaaatctagttgacgaaattgttcatcaaatactaaagaagtccgtgcatacatcttcaagtgttgacaagggcttcataggaatggattcccgcattcatgatttattaagcaattacatatatccgcagcttggtggggtggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctcgagctatccatgatgaaatttgtcaggattttgaccggagctgctttctttccaatgttagagaaatgtctaaaaagaacggcctagtttctctacaagaaaaacttctttccagaatcctgatggcaaaagttgaaaatatagaggatgaatacacaggagctgctatgatagaaaggcggtcgtgtaaaatgaaggtgcttgttgttattgatgatgtgcatcagttgacacaattagagaaattggctggatgtcgcaactggtttggtccagggagtagaatcatcataaccaccacagatgttcagttgttaaaggcacatgatgttgatgctacatacaaggttaaagggttaaaccatgatgaagcacttcaacttttgagtttgaaggcttttaagaagtgtcccccaccagaagattatttgcatctgtgcaaccttattttagggtatgctcaggggcttccgttggctctcgtggttttaggttcttttctatttgatagaagcactgatgaatgggcaagtgcaatagataggctaaagaacacaccagataaacgcattattgaggtgcttcgaattagttttgacggactggatgaaaaagacaaagaaatattcctacatatcgcttgcttttacaaggggaaggataaggatcgtgtgacgcaaatactagactattgccagctaaaccctgtcattggtttaagacttctttctgatagatctctcataactatctccaacaatgaagtgtggatgcatgatttgctacaagaattgggctgggaaattgttcgtgaacagtctcctacagaaccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgctgaagaaaaataagggaacggattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagaagccttttcaaatttgtctcaacttagtcttctccatattcataatgtggaccttcccaaaggcctcacttgtctttctaattccttgagactccttgaatggactgggtgtcccttaagatctctcccacgttactttgaagcagatgaacttattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaatttttacaagttgaagttcatcaaactctgccattctcaaaacattgtggagaccccagacctcacaggtgttcagaatcttgagactttagatcttgaaggatgtgcgaatttggtaagaatccatcaatccgttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaagtctcaagagtctgccaagtataattgaaatggaatctcttgaagcattaattctttccaactgctcaaaagttaagaagattcccgactttgttggaaatatggaacgtttgttggtgctttgtcttgaagggactgctattgaggaactgcctgtttcaattgaacggttgactggccttttgtcattgaatttaagcaactgcagaaatcttgtttgtcttccaagcaccttcaataaattgaagtgtcttgaaaatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgggggggagatggactgttttgaggaaactgatgtgaatagtgggtctgcaatagaaatgtcatctaccgatgatcgcagaaaatttgtgagaggttcaatctttcatggatgcaaagtagtttggggatctttaaaaaagttattgccgtctcgagtagtgcaaaaagtgaatacagagccaatgagtttccgcttgcctatatctggtctatgtaatttaacatatctgaacctgagtaattccaatcttagtgaaggagcatttgccaatgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgtttgccttccttcaggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtatacttgatttaagggcagatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagactaaaaaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatcaaggatgcaataacatagcatttgaaatgctgaagacattcatgtatcagggaatctctaataagagtgaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcagagtgttgggtgttctgtaagtttatctctacctgcacattggaataacagtcgggttttgggatttgctctgtgtgctgtttttgaactccatgagcaccatcgggtggataagcttcatagagatgaattcaagacttttagtgcaacacatcatcttgtatgctgcctgaagctcgatggaagaaaattggaagtatatggcaaacagcctgcatttcgctttagtgaagaattttgccaggttaagtcagatcacctgtggctattctatgtatcttgtgataaatactttggtacacagtggttgcataatagttgcagtcagcttgagttcttatttaaaaccagagggccgagtctgaaggtgaaggagtgtggagtccgtctgatatatgagcaagatgtgcaagatttgaaccaaacaaccactcaatcaagcagtaggatgtctccttatgaggatatattgattggttttgacattccagttacaggggaaaccagtggcactggtagcagaacttgcgcgcttgaagaattgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1196

Amino Acids

135.86

Weight (kDa)

6.9

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3085
AccB1I GGYRCC 1 cut(s) 342
AccB7I CCANNNNNTGG 2 cut(s) 1627, 3151
AccI GTMKAC 1 cut(s) 2800
AccII CGCG 1 cut(s) 3575
AciI CCGC 6 cut(s) 340, 607, 641, 685, 892, 2563
AclI AACGTT 1 cut(s) 2173
AclWI GGATC 6 cut(s) 320, 333, 667, 680, 1386, 2506
AcuI CTGAAG 5 cut(s) 1613, 2694, 2972, 3236, 3428
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 2827, 3343
AfiI CCNNNNNNNGG 6 cut(s) 647, 1424, 1627, 2576, 3151, 3539
AflII CTTAAG 1 cut(s) 1789
AhdI GACNNNNNGTC 1 cut(s) 1782
AjnI CCWGG 5 cut(s) 443, 985, 1543, 3010, 3285
AjuI GAANNNNNNNTTGG 2 cut(s) 2732, 2764
Alw21I GWGCWC 2 cut(s) 366, 3144
AlwI GGATC 6 cut(s) 320, 333, 667, 680, 1386, 2506
AlwNI CAGNNNCTG 1 cut(s) 875
Ama87I CYCGRG 2 cut(s) 711, 2523
AoxI GGCC 6 cut(s) 167, 292, 793, 1735, 2242, 3398
ApeKI GCWGC 4 cut(s) 643, 753, 875, 3210
ArsI GACNNNNNNTTYG 2 cut(s) 2230, 2262
AseI ATTAAT 2 cut(s) 423, 2114
Asp700I GAANNNNTTC 8 cut(s) 534, 601, 816, 1086, 1518, 1612, 2957, 2994
AspLEI GCGC 2 cut(s) 3575, 3577
AspS9I GGNCC 4 cut(s) 292, 983, 1723, 3398
AsuHPI GGTGA 4 cut(s) 115, 2680, 3293, 3424
AsuII TTCGAA 1 cut(s) 1297
AvaI CYCGRG 2 cut(s) 711, 2523
AvaII GGWCC 2 cut(s) 983, 1723
BamHI GGATCC 2 cut(s) 325, 672
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 366
BauI CACGAG 1 cut(s) 1193
BbsI GAAGAC 5 cut(s) 304, 1581, 1694, 2279, 2960
Bbv12I GWGCWC 2 cut(s) 366, 3144
BbvI GCAGC 4 cut(s) 655, 740, 862, 3197
BccI CCATC 9 cut(s) 283, 829, 2016, 2374, 2797, 2813, 3048, 3153, 3218
BceAI ACGGC 3 cut(s) 182, 808, 2503
BciT130I CCWGG 5 cut(s) 445, 987, 1545, 3012, 3287
BfaI CTAG 3 cut(s) 521, 797, 1397
BfmI CTRYAG 2 cut(s) 1536, 2269
BfrI CTTAAG 1 cut(s) 1789
BfuAI ACCTGC 1 cut(s) 3085
BglII AGATCT 4 cut(s) 200, 1448, 1793, 1975
BisI GCNGC 5 cut(s) 341, 644, 754, 876, 3211
BlsI GCNGC 5 cut(s) 342, 645, 755, 877, 3212
Bme1390I CCNGG 5 cut(s) 445, 987, 1545, 3012, 3287
Bme18I GGWCC 2 cut(s) 983, 1723
BmeRI GACNNNNNGTC 1 cut(s) 1782
BmeT110I CYCGRG 2 cut(s) 711, 2523
BmgT120I GGNCC 4 cut(s) 292, 983, 1723, 3398
BmiI GGNNCC 3 cut(s) 327, 344, 674
BmrFI CCNGG 5 cut(s) 445, 987, 1545, 3012, 3287
BmrI ACTGGG 1 cut(s) 1788
BmsI GCATC 9 cut(s) 943, 1036, 1153, 1473, 2330, 2471, 2839, 2861, 2915
BmuI ACTGGG 1 cut(s) 1788
BoxI GACNNNNGTC 1 cut(s) 464
BpiI GAAGAC 5 cut(s) 304, 1581, 1694, 2279, 2960
BpmI CTGGAG 2 cut(s) 181, 466
Bpu10I CCTNAGC 1 cut(s) 1173
Bpu14I TTCGAA 1 cut(s) 1297
BpuEI CTTGAG 6 cut(s) 167, 1780, 1985, 2054, 2756, 3395
BsaBI GATNNNNATC 2 cut(s) 933, 1377
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1572, 1928
BsaJI CCNNGG 3 cut(s) 676, 986, 1621
BsaWI WCCGGW 1 cut(s) 747
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 6 cut(s) 647, 1424, 1627, 2576, 3151, 3539
Bse1I ACTGG 7 cut(s) 980, 1320, 1783, 2245, 3533, 3549, 3562
Bse8I GATNNNNATC 2 cut(s) 933, 1377
BseBI CCWGG 5 cut(s) 445, 987, 1545, 3012, 3287
BseDI CCNNGG 3 cut(s) 676, 986, 1621
BseJI GATNNNNATC 2 cut(s) 933, 1377
BseLI CCNNNNNNNGG 6 cut(s) 647, 1424, 1627, 2576, 3151, 3539
BseMII CTCAG 3 cut(s) 1187, 2597, 3018
BseNI ACTGG 7 cut(s) 980, 1320, 1783, 2245, 3533, 3549, 3562
BsePI GCGCGC 1 cut(s) 3573
BseXI GCAGC 4 cut(s) 655, 740, 862, 3197
BseYI CCCAGC 2 cut(s) 483, 1509
BsgI GTGCAG 2 cut(s) 84, 3063
Bsh1236I CGCG 1 cut(s) 3575
Bsh1285I CGRYCG 1 cut(s) 896
BshFI GGCC 6 cut(s) 169, 294, 795, 1737, 2244, 3400
BshNI GGYRCC 1 cut(s) 342
BsiEI CGRYCG 1 cut(s) 896
BsiHKAI GWGCWC 2 cut(s) 366, 3144
BsiHKCI CYCGRG 2 cut(s) 711, 2523
BsiSI CCGG 1 cut(s) 748
BslFI GGGAC 3 cut(s) 1107, 1770, 2212
BslI CCNNNNNNNGG 6 cut(s) 647, 1424, 1627, 2576, 3151, 3539
BsmBI CGTCTC 1 cut(s) 2526
BsmFI GGGAC 3 cut(s) 1107, 1770, 2212
BsmI GAATGC 1 cut(s) 609
BsnI GGCC 6 cut(s) 169, 294, 795, 1737, 2244, 3400
Bso31I GGTCTC 2 cut(s) 1572, 1928
BsoBI CYCGRG 2 cut(s) 711, 2523
Bsp119I TTCGAA 1 cut(s) 1297
Bsp1286I GDGCHC 2 cut(s) 366, 3144
Bsp19I CCATGG 1 cut(s) 676
BspACI CCGC 6 cut(s) 340, 607, 641, 685, 892, 2563
BspANI GGCC 6 cut(s) 169, 294, 795, 1737, 2244, 3400
BspCNI CTCAG 3 cut(s) 1186, 2598, 3019
BspFNI CGCG 1 cut(s) 3575
BspHI TCATGA 2 cut(s) 613, 1570
BspLI GGNNCC 3 cut(s) 327, 344, 674
BspMAI CTGCAG 1 cut(s) 2273
BspMI ACCTGC 1 cut(s) 3085
BspPI GGATC 6 cut(s) 320, 333, 667, 680, 1386, 2506
BspT104I TTCGAA 1 cut(s) 1297
BspT107I GGYRCC 1 cut(s) 342
BspTI CTTAAG 1 cut(s) 1789
BspTNI GGTCTC 2 cut(s) 1572, 1928
BsrI ACTGG 7 cut(s) 980, 1320, 1783, 2245, 3533, 3549, 3562
BssECI CCNNGG 3 cut(s) 676, 986, 1621
BssHII GCGCGC 1 cut(s) 3573
BssNAI GTATAC 1 cut(s) 2801
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1193
BssT1I CCWWGG 2 cut(s) 676, 1621
Bst1107I GTATAC 1 cut(s) 2801
Bst2BI CACGAG 1 cut(s) 1193
Bst2UI CCWGG 5 cut(s) 445, 987, 1545, 3012, 3287
Bst4CI ACNGT 5 cut(s) 1530, 2235, 2387, 3095, 3348
Bst6I CTCTTC 1 cut(s) 19
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1789
BstAPI GCANNNNNTGC 3 cut(s) 1492, 3451, 3570
BstBI TTCGAA 1 cut(s) 1297
BstC8I GCNNGC 6 cut(s) 683, 1354, 1409, 2567, 3258, 3575
BstDEI CTNAG 9 cut(s) 47, 104, 1173, 1697, 2606, 2621, 2681, 2730, 3027
BstDSI CCRYGG 1 cut(s) 676
BstEII GGTNACC 1 cut(s) 2668
BstFNI CGCG 1 cut(s) 3575
BstHHI GCGC 2 cut(s) 3575, 3577
BstMCI CGRYCG 1 cut(s) 896
BstMWI GCNNNNNNNGC 8 cut(s) 449, 687, 1492, 2731, 3119, 3451, 3561, 3570
BstNI CCWGG 5 cut(s) 445, 987, 1545, 3012, 3287
BstNSI RCATGY 1 cut(s) 685
BstPAI GACNNNNGTC 1 cut(s) 464
BstPI GGTNACC 1 cut(s) 2668
BstSCI CCNGG 5 cut(s) 443, 985, 1543, 3010, 3285
BstSFI CTRYAG 2 cut(s) 1536, 2269
BstUI CGCG 1 cut(s) 3575
BstV1I GCAGC 4 cut(s) 655, 740, 862, 3197
BstV2I GAAGAC 5 cut(s) 304, 1581, 1694, 2279, 2960
BstX2I RGATCY 7 cut(s) 200, 325, 672, 1448, 1793, 1975, 2498
BstYI RGATCY 7 cut(s) 200, 325, 672, 1448, 1793, 1975, 2498
BstZ17I GTATAC 1 cut(s) 2801
BsuRI GGCC 6 cut(s) 169, 294, 795, 1737, 2244, 3400
BtgI CCRYGG 1 cut(s) 676
BtsIMutI CAGTG 5 cut(s) 1227, 2831, 3353, 3555, 3556
BveI ACCTGC 1 cut(s) 3085
Cac8I GCNNGC 6 cut(s) 683, 1354, 1409, 2567, 3258, 3575
CaiI CAGNNNCTG 1 cut(s) 875
CciI TCATGA 2 cut(s) 613, 1570
CfoI GCGC 2 cut(s) 3575, 3577
Cfr13I GGNCC 4 cut(s) 292, 983, 1723, 3398
CseI GACGC 1 cut(s) 1396
Csp6I GTAC 2 cut(s) 2826, 3342
CviQI GTAC 2 cut(s) 2826, 3342
DdeI CTNAG 9 cut(s) 47, 104, 1173, 1697, 2606, 2621, 2681, 2730, 3027
DraI TTTAAA 2 cut(s) 2505, 3388
DriI GACNNNNNGTC 1 cut(s) 1782
Eam1104I CTCTTC 1 cut(s) 19
Eam1105I GACNNNNNGTC 1 cut(s) 1782
EarI CTCTTC 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 2 cut(s) 676, 1621
Eco147I AGGCCT 1 cut(s) 1737
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 2 cut(s) 1572, 1928
Eco47I GGWCC 2 cut(s) 983, 1723
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 5 cut(s) 1613, 2694, 2972, 3236, 3428
Eco88I CYCGRG 2 cut(s) 711, 2523
Eco91I GGTNACC 1 cut(s) 2668
EcoICRI GAGCTC 1 cut(s) 364
EcoO65I GGTNACC 1 cut(s) 2668
EcoRI GAATTC 1 cut(s) 3173
EcoRII CCWGG 5 cut(s) 443, 985, 1543, 3010, 3285
EcoT14I CCWWGG 2 cut(s) 676, 1621
EcoT22I ATGCAT 3 cut(s) 281, 1488, 2854
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 676, 1621
Esp3I CGTCTC 1 cut(s) 2526
FalI AAGNNNNNCTT 2 cut(s) 801, 833
FaqI GGGAC 3 cut(s) 1107, 1770, 2212
FauI CCCGC 2 cut(s) 614, 678
FblI GTMKAC 1 cut(s) 2800
Fnu4HI GCNGC 5 cut(s) 341, 644, 754, 876, 3211
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 5 cut(s) 341, 644, 754, 876, 3211
FspBI CTAG 3 cut(s) 521, 797, 1397
GlaI GCGC 2 cut(s) 3574, 3576
GluI GCNGC 5 cut(s) 341, 644, 754, 876, 3211
GsaI CCCAGC 2 cut(s) 487, 1513
GsuI CTGGAG 2 cut(s) 181, 466
HaeIII GGCC 6 cut(s) 169, 294, 795, 1737, 2244, 3400
HapII CCGG 1 cut(s) 748
HgaI GACGC 1 cut(s) 1396
HhaI GCGC 2 cut(s) 3575, 3577
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 2 cut(s) 3573, 3575
HinP1I GCGC 2 cut(s) 3573, 3575
HincII GTYRAC 6 cut(s) 9, 526, 580, 942, 1641, 2238
HindII GTYRAC 6 cut(s) 9, 526, 580, 942, 1641, 2238
HindIII AAGCTT 3 cut(s) 2033, 2732, 3158
HpaII CCGG 1 cut(s) 748
HphI GGTGA 4 cut(s) 115, 2680, 3293, 3424
Hpy188I TCNGA 9 cut(s) 334, 1444, 1959, 2601, 2782, 3045, 3298, 3408, 3435
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 5 cut(s) 1530, 2235, 2387, 3095, 3348
HpyCH4IV ACGT 3 cut(s) 1552, 1804, 2173
HpyF10VI GCNNNNNNNGC 8 cut(s) 449, 687, 1492, 2731, 3119, 3451, 3561, 3570
HpyF3I CTNAG 9 cut(s) 47, 104, 1173, 1697, 2606, 2621, 2681, 2730, 3027
HpySE526I ACGT 3 cut(s) 1552, 1804, 2173
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 2 cut(s) 3573, 3575
LmnI GCTCC 3 cut(s) 750, 872, 2630
Lsp1109I GCAGC 4 cut(s) 655, 740, 862, 3197
LweI GCATC 9 cut(s) 943, 1036, 1153, 1473, 2330, 2471, 2839, 2861, 2915
MaeI CTAG 3 cut(s) 521, 797, 1397
MaeII ACGT 3 cut(s) 1552, 1804, 2173
MaeIII GTNAC 6 cut(s) 121, 1384, 1805, 2651, 2668, 3535
MfeI CAATTG 3 cut(s) 186, 2226, 2896
MflI RGATCY 7 cut(s) 200, 325, 672, 1448, 1793, 1975, 2498
MhlI GDGCHC 2 cut(s) 366, 3144
MlyI GAGTC 5 cut(s) 188, 1758, 2083, 3412, 3435
MmeI TCCRAC 4 cut(s) 1491, 1999, 2140, 2148
Mph1103I ATGCAT 3 cut(s) 281, 1488, 2854
MroXI GAANNNNTTC 8 cut(s) 534, 601, 816, 1086, 1518, 1612, 2957, 2994
MslI CAYNNNNRTG 5 cut(s) 128, 596, 1631, 3045, 3168
MspCI CTTAAG 1 cut(s) 1789
MspI CCGG 1 cut(s) 748
MspR9I CCNGG 5 cut(s) 445, 987, 1545, 3012, 3287
MunI CAATTG 3 cut(s) 186, 2226, 2896
Mva1269I GAATGC 1 cut(s) 609
MvaI CCWGG 5 cut(s) 445, 987, 1545, 3012, 3287
MvnI CGCG 1 cut(s) 3575
MwoI GCNNNNNNNGC 8 cut(s) 449, 687, 1492, 2731, 3119, 3451, 3561, 3570
NcoI CCATGG 1 cut(s) 676
NlaIV GGNNCC 3 cut(s) 327, 344, 674
NmeAIII GCCGAG 2 cut(s) 2331, 3426
NmuCI GTSAC 3 cut(s) 121, 1384, 2668
NsiI ATGCAT 3 cut(s) 281, 1488, 2854
NspI RCATGY 1 cut(s) 685
NspV TTCGAA 1 cut(s) 1297
PaeI GCATGC 1 cut(s) 685
PaeR7I CTCGAG 2 cut(s) 711, 2523
PagI TCATGA 2 cut(s) 613, 1570
PauI GCGCGC 1 cut(s) 3573
PceI AGGCCT 1 cut(s) 1737
PctI GAATGC 1 cut(s) 609
PdmI GAANNNNTTC 8 cut(s) 534, 601, 816, 1086, 1518, 1612, 2957, 2994
PflMI CCANNNNNTGG 2 cut(s) 1627, 3151
PfoI TCCNGGA 1 cut(s) 3010
PkrI GCNGC 5 cut(s) 342, 645, 755, 877, 3212
PleI GAGTC 5 cut(s) 188, 1758, 2082, 3411, 3434
PpsI GAGTC 5 cut(s) 188, 1758, 2082, 3411, 3434
PshAI GACNNNNGTC 1 cut(s) 464
PshBI ATTAAT 2 cut(s) 423, 2114
Psp124BI GAGCTC 1 cut(s) 366
Psp1406I AACGTT 1 cut(s) 2173
Psp6I CCWGG 5 cut(s) 443, 985, 1543, 3010, 3285
PspEI GGTNACC 1 cut(s) 2668
PspFI CCCAGC 2 cut(s) 483, 1509
PspGI CCWGG 5 cut(s) 443, 985, 1543, 3010, 3285
PspN4I GGNNCC 3 cut(s) 327, 344, 674
PspPI GGNCC 4 cut(s) 292, 983, 1723, 3398
PspXI VCTCGAGB 1 cut(s) 711
PstI CTGCAG 1 cut(s) 2273
PstNI CAGNNNCTG 1 cut(s) 875
PsuI RGATCY 7 cut(s) 200, 325, 672, 1448, 1793, 1975, 2498
PteI GCGCGC 1 cut(s) 3573
RsaI GTAC 2 cut(s) 2827, 3343
RsaNI GTAC 2 cut(s) 2826, 3342
RseI CAYNNNNRTG 5 cut(s) 128, 596, 1631, 3045, 3168
SacI GAGCTC 1 cut(s) 366
SatI GCNGC 5 cut(s) 341, 644, 754, 876, 3211
Sau96I GGNCC 4 cut(s) 292, 983, 1723, 3398
SchI GAGTC 5 cut(s) 188, 1758, 2083, 3412, 3435
ScrFI CCNGG 5 cut(s) 445, 987, 1545, 3012, 3287
SduI GDGCHC 2 cut(s) 366, 3144
SfaNI GCATC 9 cut(s) 943, 1036, 1153, 1473, 2330, 2471, 2839, 2861, 2915
SfcI CTRYAG 2 cut(s) 1536, 2269
Sfr274I CTCGAG 2 cut(s) 711, 2523
SfuI TTCGAA 1 cut(s) 1297
SinI GGWCC 2 cut(s) 983, 1723
SlaI CTCGAG 2 cut(s) 711, 2523
SmiMI CAYNNNNRTG 5 cut(s) 128, 596, 1631, 3045, 3168
SmlI CTYRAG 9 cut(s) 146, 711, 1759, 1789, 1964, 2069, 2523, 2735, 3374
SmoI CTYRAG 9 cut(s) 146, 711, 1759, 1789, 1964, 2069, 2523, 2735, 3374
SphI GCATGC 1 cut(s) 685
SseBI AGGCCT 1 cut(s) 1737
SsiI CCGC 6 cut(s) 340, 607, 641, 685, 892, 2563
SspI AATATT 2 cut(s) 1338, 3022
SspMI CTAG 3 cut(s) 521, 797, 1397
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 1 cut(s) 1737
StyD4I CCNGG 5 cut(s) 443, 985, 1543, 3010, 3285
StyI CCWWGG 2 cut(s) 676, 1621
TaaI ACNGT 5 cut(s) 1530, 2235, 2387, 3095, 3348
TaiI ACGT 3 cut(s) 1555, 1807, 2176
TaqI TCGA 5 cut(s) 206, 712, 1297, 2524, 3222
TatI WGTACW 1 cut(s) 2825
TauI GCSGC 1 cut(s) 343
TscAI CASTG 5 cut(s) 1234, 2838, 3353, 3556, 3562
TseFI GTSAC 3 cut(s) 121, 1384, 2668
TseI GCWGC 4 cut(s) 643, 753, 875, 3210
Tsp45I GTSAC 3 cut(s) 121, 1384, 2668
TspGWI ACGGA 7 cut(s) 492, 547, 1173, 1326, 1625, 2005, 3419
TspRI CASTG 5 cut(s) 1234, 2838, 3353, 3556, 3562
Van91I CCANNNNNTGG 2 cut(s) 1627, 3151
Vha464I CTTAAG 1 cut(s) 1789
VpaK11BI GGWCC 2 cut(s) 983, 1723
VspI ATTAAT 2 cut(s) 423, 2114
XceI RCATGY 1 cut(s) 685
XcmI CCANNNNNNNNNTGG 3 cut(s) 832, 2015, 3047
XhoI CTCGAG 2 cut(s) 711, 2523
XmiI GTMKAC 1 cut(s) 2800
XmnI GAANNNNTTC 8 cut(s) 534, 601, 816, 1086, 1518, 1612, 2957, 2994
XspI CTAG 3 cut(s) 521, 797, 1397
Zsp2I ATGCAT 3 cut(s) 281, 1488, 2854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.