Rmu_sc0002263.1_g000015

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002263.1
OG0000105
Physical Location & Seq
Reverse (-)
51156 .. 55327
4172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002263.1_g000015.1.cds

Sequence Viewer

Length: 3585 bp
atggcgtcaacctcttctcgtcgtcaatggaaatacgatgtctttctgagtttcaggggggcagatacccgcgataatattaccggtcatctgtatcatgcactaaatcggaaaggaattctcacctttatggatgaccgagagcttgagaaaggaaaatacattaggcctgaacttttagctgcaattgaggagtctagatgtgcgattgtgattctctcatggagatatgctcgttcgtcatggtgcttggatgaacttgtcaagattattcaatgcatgaaagagctgggccaacgagtcctgcccgtcttctacggcgtgaatccttctgaagtgcggcaccaaaggggaagttttgagctcaaaaggaaaccccaagtagaagtgaaagtaagggaacatgaagaagtttatgggaagaatgtggacagactaaatgcctggacagctgctttgacagaggtcgccaatctttctggctgggattccaagaattatccgttatgttacattactgagtttctaactcagaatttttatctaaattttctcagattcgtaagagaactaattgaggaaattgttaatcatatactaaagaagtccgtgtatacatcttcaagtgttgacaagggcttcataggaatggattcccgcattgatgatctattaagcaattacatatgtccacagctttgtggggtgcgttttatagggatccatggcatgcggggcataggtaagacaacagttgcccgagctatctacgatgaaatttgccaggattttgaccgaagctgctttctttccaatgttagagaaatgtctaaaaacaatggcctagtttctctacaagaaaaacttctttccagaatcctgctggcaaaaattgaaaatatagacgatgaatacacaggagctgctatgatagaaaggcggttgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcacaattgttttggtccagggagtagaattatcataaccaccacagatattcagttgctaaaggcacatgatgttgatgctacatacgaggctaacgggttaaactctgatgaagcacttcaacttttgagtttgaaggcttttaagaaatgtcccccaccagatgattatttgcatctgtgctaccatattttagggtatgctcaggggcttccattggctcttgtggttttaggttcttttctatttggtagaagcactgatgaatgggtaagtgcaatcgataggctaaagaacacgccacataaacgaattattgaggtgcttcggattagttttgatggactggaagaaaaagacaaagaaatcttcctacatattgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactggactattgcgagctaaaccctgtcattggtttaagtgtcctagctgatagatctctcataactatctccaataacgaactgtcgatgcatgatttgctacaagaaacaggctgggaaattgttcgtgaacagtctcctaaagaggcaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgcttaagagaaataagggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagaagccttttcaaatttgtctcaacttagtcttcttcatatttgtaatgtggacctgcttcccgaaggcctcacttgtctttctaattccttgagactcctcgaatggactgggtatcccttaagatctctcccacaaaattttgaagcagatgagcttattgaacttaacttgtgccacagcaacattgaacagctttggaagggaacaaagaattttgacaagctgaagttcatcaaactttgccgttctcaaaacattgtggagaccccagacctcgcaggcgttcagaatcttgagagcttagatcttgaaggatgtgagaatttggtaagaatccatcaatcccttgcattgctcaaaaagcttatcttcgtgaatcttaaagactgcaaaagcctcgaaagtctgccaagtataattgaaatggaatctcttgaaacattagttctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgttggtgctttgtcttgatgagactgccattgaggaactgcctgtttcaattgaacggctgactggccttgtgtcattgaatctaagcaactgcagaaatcttgtttgtcttccaagcaccatcaataaattgaagtctattgaagatcttaatctttctggatgcttgaacctcggcaaacctcaggtaaatgtgggggtgatgggctgctttgaggaaactgatgtgaatagtgggtctgcaatagaaatgtcatctacccatgatcgcataaaatatgtgggaagctcaatcttgccttctggatgggtgcaaaaagtgaatacagagccaacgagttttcgcttgcctatatctggtctgtgtaatttaacatatttgaacctgagtaattgcaatcttggtgacggagcatttgccaatgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgccttccttcaggcattggattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatccaatggtatacttgatttaagggcagatggttgtacttcactgaagtacttgtttaatgcatcaaatttgaacagactaaacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatcaaggatgcaataacgtagcatttgaaatgctgaagacattcatgtatcagggaatctctaataacagggaaacttttcaaattgtaattcctggaagtaatattcctgagtggttcagccatcggactgatgggcgttccttaggtgtatctctacctgcacattggaataacaggcgatttttgggatttgctttgtgtgctgtttttgtactccataagcaccaacggggtaagctttctattgatgaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagctcgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttaagtcagatcacctgtggctattctatatatctcgtgataaatactttggtactgagtggtggcataacagttgcagacggcttgagttcttatttaaaatcagagggccgggtctgaaggtgaaggagtgtggagtccgtctgatatatgagcaagatgtgcaagagctgaaccaaacgaccactcaatcaagcagtaggatgtctccttatgaggatatattgaatggttttgacattccggttgcagggaaaagtggcattccggaaaaccagtggcactggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1194

Amino Acids

135.87

Weight (kDa)

6.44

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1782, 3094
AccB1I GGYRCC 1 cut(s) 342
AccB7I CCANNNNNTGG 2 cut(s) 1675, 2804
AccI GTMKAC 2 cut(s) 614, 2809
AccII CGCG 1 cut(s) 72
AccIII TCCGGA 1 cut(s) 3562
AciI CCGC 5 cut(s) 70, 340, 658, 733, 940
AclI AACGTT 1 cut(s) 2224
AclWI GGATC 4 cut(s) 715, 728, 990, 1434
AcuI CTGAAG 7 cut(s) 354, 1967, 2703, 2864, 2981, 3242, 3434
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 2836, 2849, 3141, 3349
AfiI CCNNNNNNNGG 5 cut(s) 1472, 1675, 2585, 2804, 3545
AflII CTTAAG 2 cut(s) 1640, 1840
AgeI ACCGGT 1 cut(s) 83
AjnI CCWGG 5 cut(s) 443, 783, 1033, 3019, 3291
AjuI GAANNNNNNNTTGG 2 cut(s) 2741, 2773
Alw21I GWGCWC 1 cut(s) 366
Alw26I GTCTC 8 cut(s) 1584, 1620, 1743, 1807, 1979, 2243, 2767, 3507
AlwI GGATC 4 cut(s) 715, 728, 990, 1434
AlwNI CAGNNNCTG 1 cut(s) 923
Ama87I CYCGRG 2 cut(s) 759, 2201
Aor13HI TCCGGA 1 cut(s) 3562
AoxI GGCC 6 cut(s) 167, 292, 841, 1786, 2293, 3404
ApeKI GCWGC 5 cut(s) 182, 452, 801, 923, 2436
ArsI GACNNNNNNTTYG 4 cut(s) 439, 471, 2627, 2659
AsiGI ACCGGT 1 cut(s) 83
Asp700I GAANNNNTTC 7 cut(s) 652, 864, 1134, 1566, 1660, 2966, 3003
AspS9I GGNCC 4 cut(s) 292, 1031, 1771, 3404
AsuC2I CCSGG 1 cut(s) 3408
AsuHPI GGTGA 6 cut(s) 115, 2440, 2645, 2689, 3299, 3430
AvaI CYCGRG 2 cut(s) 759, 2201
AvaII GGWCC 2 cut(s) 1031, 1771
AxyI CCTNAGG 2 cut(s) 2412, 3070
BamHI GGATCC 1 cut(s) 720
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 366
BauI CACGAG 1 cut(s) 3330
BbsI GAAGAC 5 cut(s) 304, 1629, 1742, 2330, 2969
Bbv12I GWGCWC 1 cut(s) 366
BbvI GCAGC 5 cut(s) 169, 439, 788, 910, 2423
BceAI ACGGC 4 cut(s) 334, 1950, 2300, 3392
BcgI CGANNNNNNTGC 2 cut(s) 2101, 2135
BciT130I CCWGG 5 cut(s) 445, 785, 1035, 3021, 3293
BciVI GTATCC 1 cut(s) 1845
BcnI CCSGG 1 cut(s) 3408
BcoDI GTCTC 8 cut(s) 1584, 1620, 1743, 1807, 1979, 2243, 2767, 3507
BfaI CTAG 3 cut(s) 198, 845, 1487
BfmI CTRYAG 1 cut(s) 2320
BfrI CTTAAG 2 cut(s) 1640, 1840
BfuAI ACCTGC 2 cut(s) 1782, 3094
BfuI GTATCC 1 cut(s) 1845
BglII AGATCT 4 cut(s) 1496, 1844, 2026, 2374
BisI GCNGC 6 cut(s) 183, 341, 453, 802, 924, 2437
BlsI GCNGC 6 cut(s) 184, 342, 454, 803, 925, 2438
BmcAI AGTACT 1 cut(s) 2849
Bme1390I CCNGG 6 cut(s) 445, 785, 1035, 3021, 3293, 3408
Bme18I GGWCC 2 cut(s) 1031, 1771
BmeT110I CYCGRG 2 cut(s) 759, 2201
BmgT120I GGNCC 4 cut(s) 292, 1031, 1771, 3404
BmiI GGNNCC 2 cut(s) 344, 722
BmrFI CCNGG 6 cut(s) 445, 785, 1035, 3021, 3293, 3408
BmrI ACTGGG 1 cut(s) 1839
BmsI GCATC 6 cut(s) 1084, 1201, 1521, 2381, 2870, 2924
BmuI ACTGGG 1 cut(s) 1839
BoxI GACNNNNGTC 1 cut(s) 464
BpiI GAAGAC 5 cut(s) 304, 1629, 1742, 2330, 2969
BplI GAGNNNNNCTC 2 cut(s) 217, 249
Bpu10I CCTNAGC 1 cut(s) 1221
BpuEI CTTGAG 5 cut(s) 167, 1831, 2036, 2765, 3401
BpuMI CCSGG 1 cut(s) 3408
Bsa29I ATCGAT 1 cut(s) 1299
BsaBI GATNNNNATC 3 cut(s) 981, 1425, 2379
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1620, 1979
BsaJI CCNNGG 4 cut(s) 724, 1034, 1669, 2401
BsaWI WCCGGW 3 cut(s) 83, 3538, 3562
Bsc4I CCNNNNNNNGG 5 cut(s) 1472, 1675, 2585, 2804, 3545
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 6 cut(s) 1368, 1449, 1834, 2296, 3571, 3584
Bse21I CCTNAGG 2 cut(s) 2412, 3070
Bse3DI GCAATG 1 cut(s) 2072
Bse8I GATNNNNATC 3 cut(s) 981, 1425, 2379
BseAI TCCGGA 1 cut(s) 3562
BseBI CCWGG 5 cut(s) 445, 785, 1035, 3021, 3293
BseCI ATCGAT 1 cut(s) 1299
BseDI CCNNGG 4 cut(s) 724, 1034, 1669, 2401
BseGI GGATG 8 cut(s) 139, 259, 2042, 2396, 2540, 2798, 2939, 3504
BseJI GATNNNNATC 3 cut(s) 981, 1425, 2379
BseLI CCNNNNNNNGG 5 cut(s) 1472, 1675, 2585, 2804, 3545
BseMI GCAATG 1 cut(s) 2072
BseMII CTCAG 9 cut(s) 38, 510, 545, 568, 1235, 2426, 2606, 3027, 3342
BseNI ACTGG 6 cut(s) 1368, 1449, 1834, 2296, 3571, 3584
BseRI GAGGAG 2 cut(s) 206, 1808
BseXI GCAGC 5 cut(s) 169, 439, 788, 910, 2423
BseYI CCCAGC 3 cut(s) 289, 483, 1557
BsgI GTGCAG 1 cut(s) 3072
Bsh1236I CGCG 1 cut(s) 72
BshFI GGCC 6 cut(s) 169, 294, 843, 1788, 2295, 3406
BshNI GGYRCC 1 cut(s) 342
BshTI ACCGGT 1 cut(s) 83
BshVI ATCGAT 1 cut(s) 1299
BsiHKAI GWGCWC 1 cut(s) 366
BsiHKCI CYCGRG 2 cut(s) 759, 2201
BsiSI CCGG 4 cut(s) 84, 3407, 3539, 3563
BslFI GGGAC 1 cut(s) 1155
BslI CCNNNNNNNGG 5 cut(s) 1472, 1675, 2585, 2804, 3545
BsmAI GTCTC 8 cut(s) 1584, 1620, 1743, 1807, 1979, 2243, 2767, 3507
BsmFI GGGAC 1 cut(s) 1155
BsmI GAATGC 1 cut(s) 3558
BsnI GGCC 6 cut(s) 169, 294, 843, 1788, 2295, 3406
Bso31I GGTCTC 2 cut(s) 1620, 1979
BsoBI CYCGRG 2 cut(s) 759, 2201
Bsp1286I GDGCHC 1 cut(s) 366
Bsp13I TCCGGA 1 cut(s) 3562
Bsp19I CCATGG 1 cut(s) 724
BspACI CCGC 5 cut(s) 70, 340, 658, 733, 940
BspANI GGCC 6 cut(s) 169, 294, 843, 1788, 2295, 3406
BspCNI CTCAG 9 cut(s) 39, 511, 544, 567, 1234, 2425, 2607, 3028, 3343
BspDI ATCGAT 1 cut(s) 1299
BspEI TCCGGA 1 cut(s) 3562
BspFNI CGCG 1 cut(s) 72
BspHI TCATGA 1 cut(s) 1618
BspLI GGNNCC 2 cut(s) 344, 722
BspMAI CTGCAG 1 cut(s) 2324
BspMI ACCTGC 2 cut(s) 1782, 3094
BspPI GGATC 4 cut(s) 715, 728, 990, 1434
BspT107I GGYRCC 1 cut(s) 342
BspTI CTTAAG 2 cut(s) 1640, 1840
BspTNI GGTCTC 2 cut(s) 1620, 1979
BsrDI GCAATG 1 cut(s) 2072
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 6 cut(s) 1368, 1449, 1834, 2296, 3571, 3584
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 4 cut(s) 724, 1034, 1669, 2401
BssNAI GTATAC 2 cut(s) 615, 2810
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 3330
BssT1I CCWWGG 2 cut(s) 724, 1669
Bst1107I GTATAC 2 cut(s) 615, 2810
Bst2BI CACGAG 1 cut(s) 3330
Bst2UI CCWGG 5 cut(s) 445, 785, 1035, 3021, 3293
Bst4CI ACNGT 4 cut(s) 754, 1527, 1578, 3368
Bst6I CTCTTC 2 cut(s) 19, 3229
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 1640, 1840
BstAPI GCANNNNNTGC 2 cut(s) 1540, 3457
BstC8I GCNNGC 8 cut(s) 731, 885, 1402, 1457, 1594, 2002, 2576, 3264
BstDSI CCRYGG 1 cut(s) 724
BstEII GGTNACC 1 cut(s) 2677
BstF5I GGATG 8 cut(s) 139, 259, 2042, 2396, 2540, 2798, 2939, 3504
BstFNI CGCG 1 cut(s) 72
BstMAI GTCTC 8 cut(s) 1584, 1620, 1743, 1807, 1979, 2243, 2767, 3507
BstMWI GCNNNNNNNGC 7 cut(s) 449, 735, 1540, 2083, 2740, 3128, 3457
BstNI CCWGG 5 cut(s) 445, 785, 1035, 3021, 3293
BstNSI RCATGY 1 cut(s) 733
BstPAI GACNNNNGTC 1 cut(s) 464
BstPI GGTNACC 1 cut(s) 2677
BstSCI CCNGG 6 cut(s) 443, 783, 1033, 3019, 3291, 3406
BstSFI CTRYAG 1 cut(s) 2320
BstUI CGCG 1 cut(s) 72
BstV1I GCAGC 5 cut(s) 169, 439, 788, 910, 2423
BstV2I GAAGAC 5 cut(s) 304, 1629, 1742, 2330, 2969
BstX2I RGATCY 5 cut(s) 720, 1496, 1844, 2026, 2374
BstYI RGATCY 5 cut(s) 720, 1496, 1844, 2026, 2374
BstZ17I GTATAC 2 cut(s) 615, 2810
Bsu15I ATCGAT 1 cut(s) 1299
Bsu36I CCTNAGG 2 cut(s) 2412, 3070
BsuI GTATCC 1 cut(s) 1845
BsuRI GGCC 6 cut(s) 169, 294, 843, 1788, 2295, 3406
BsuTUI ATCGAT 1 cut(s) 1299
BtgI CCRYGG 1 cut(s) 724
BtsCI GGATG 8 cut(s) 139, 259, 2042, 2396, 2540, 2798, 2939, 3504
BtsIMutI CAGTG 4 cut(s) 1275, 2840, 3577, 3578
BveI ACCTGC 2 cut(s) 1782, 3094
Cac8I GCNNGC 8 cut(s) 731, 885, 1402, 1457, 1594, 2002, 2576, 3264
CaiI CAGNNNCTG 1 cut(s) 923
CciI TCATGA 1 cut(s) 1618
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 4 cut(s) 292, 1031, 1771, 3404
ClaI ATCGAT 1 cut(s) 1299
Csp6I GTAC 4 cut(s) 2835, 2848, 3140, 3348
CspAI ACCGGT 1 cut(s) 83
CviQI GTAC 4 cut(s) 2835, 2848, 3140, 3348
DraI TTTAAA 1 cut(s) 3394
Eam1104I CTCTTC 2 cut(s) 19, 3229
EarI CTCTTC 2 cut(s) 19, 3229
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 2 cut(s) 724, 1669
Eco147I AGGCCT 2 cut(s) 169, 1788
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 2 cut(s) 1620, 1979
Eco47I GGWCC 2 cut(s) 1031, 1771
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 7 cut(s) 354, 1967, 2703, 2864, 2981, 3242, 3434
Eco81I CCTNAGG 2 cut(s) 2412, 3070
Eco88I CYCGRG 2 cut(s) 759, 2201
Eco91I GGTNACC 1 cut(s) 2677
EcoICRI GAGCTC 1 cut(s) 364
EcoO65I GGTNACC 1 cut(s) 2677
EcoRI GAATTC 2 cut(s) 117, 3179
EcoRII CCWGG 5 cut(s) 443, 783, 1033, 3019, 3291
EcoT14I CCWWGG 2 cut(s) 724, 1669
EcoT22I ATGCAT 3 cut(s) 281, 1536, 2863
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 724, 1669
FalI AAGNNNNNCTT 4 cut(s) 849, 881, 2075, 2107
FaqI GGGAC 1 cut(s) 1155
FauI CCCGC 3 cut(s) 77, 665, 726
FauNDI CATATG 1 cut(s) 686
FblI GTMKAC 2 cut(s) 614, 2809
Fnu4HI GCNGC 6 cut(s) 183, 341, 453, 802, 924, 2437
FokI GGATG 8 cut(s) 146, 266, 2049, 2403, 2547, 2785, 2946, 3511
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 6 cut(s) 183, 341, 453, 802, 924, 2437
FspBI CTAG 3 cut(s) 198, 845, 1487
GluI GCNGC 6 cut(s) 183, 341, 453, 802, 924, 2437
GsaI CCCAGC 3 cut(s) 293, 487, 1561
HaeIII GGCC 6 cut(s) 169, 294, 843, 1788, 2295, 3406
HapII CCGG 4 cut(s) 84, 3407, 3539, 3563
Hin1I GRCGYC 1 cut(s) 5
HincII GTYRAC 4 cut(s) 9, 631, 990, 1689
HindII GTYRAC 4 cut(s) 9, 631, 990, 1689
HindIII AAGCTT 3 cut(s) 2084, 2741, 3164
HpaII CCGG 4 cut(s) 84, 3407, 3539, 3563
HphI GGTGA 6 cut(s) 115, 2440, 2645, 2689, 3299, 3430
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 4 cut(s) 754, 1527, 1578, 3368
HpyCH4IV ACGT 3 cut(s) 1600, 2224, 2943
HpyF10VI GCNNNNNNNGC 7 cut(s) 449, 735, 1540, 2083, 2740, 3128, 3457
HpySE526I ACGT 3 cut(s) 1600, 2224, 2943
Hsp92I GRCGYC 1 cut(s) 5
Kpn2I TCCGGA 1 cut(s) 3562
LmnI GCTCC 2 cut(s) 920, 2639
Lsp1109I GCAGC 5 cut(s) 169, 439, 788, 910, 2423
LweI GCATC 6 cut(s) 1084, 1201, 1521, 2381, 2870, 2924
MaeI CTAG 3 cut(s) 198, 845, 1487
MaeII ACGT 3 cut(s) 1600, 2224, 2943
MaeIII GTNAC 6 cut(s) 509, 1016, 1432, 2633, 2660, 2677
MfeI CAATTG 4 cut(s) 186, 1021, 2277, 2905
MflI RGATCY 5 cut(s) 720, 1496, 1844, 2026, 2374
MhlI GDGCHC 1 cut(s) 366
MlyI GAGTC 4 cut(s) 203, 309, 1809, 3441
MmeI TCCRAC 1 cut(s) 2191
Mph1103I ATGCAT 3 cut(s) 281, 1536, 2863
MroI TCCGGA 1 cut(s) 3562
MroXI GAANNNNTTC 7 cut(s) 652, 864, 1134, 1566, 1660, 2966, 3003
MslI CAYNNNNRTG 3 cut(s) 128, 647, 1679
MspA1I CMGCKG 1 cut(s) 452
MspCI CTTAAG 2 cut(s) 1640, 1840
MspI CCGG 4 cut(s) 84, 3407, 3539, 3563
MspR9I CCNGG 6 cut(s) 445, 785, 1035, 3021, 3293, 3408
MunI CAATTG 4 cut(s) 186, 1021, 2277, 2905
Mva1269I GAATGC 1 cut(s) 3558
MvaI CCWGG 5 cut(s) 445, 785, 1035, 3021, 3293
MvnI CGCG 1 cut(s) 72
MwoI GCNNNNNNNGC 7 cut(s) 449, 735, 1540, 2083, 2740, 3128, 3457
NciI CCSGG 1 cut(s) 3408
NcoI CCATGG 1 cut(s) 724
NdeI CATATG 1 cut(s) 686
NlaIV GGNNCC 2 cut(s) 344, 722
NmeAIII GCCGAG 1 cut(s) 2382
NmuCI GTSAC 4 cut(s) 1016, 1432, 2633, 2677
NsiI ATGCAT 3 cut(s) 281, 1536, 2863
NspI RCATGY 1 cut(s) 733
PaeI GCATGC 1 cut(s) 733
PagI TCATGA 1 cut(s) 1618
PceI AGGCCT 2 cut(s) 169, 1788
PctI GAATGC 1 cut(s) 3558
PdmI GAANNNNTTC 7 cut(s) 652, 864, 1134, 1566, 1660, 2966, 3003
PflMI CCANNNNNTGG 2 cut(s) 1675, 2804
PfoI TCCNGGA 1 cut(s) 3019
PinAI ACCGGT 1 cut(s) 83
PkrI GCNGC 6 cut(s) 184, 342, 454, 803, 925, 2438
PleI GAGTC 4 cut(s) 202, 308, 1809, 3440
PpsI GAGTC 4 cut(s) 202, 308, 1809, 3440
PshAI GACNNNNGTC 1 cut(s) 464
Psp124BI GAGCTC 1 cut(s) 366
Psp1406I AACGTT 1 cut(s) 2224
Psp6I CCWGG 5 cut(s) 443, 783, 1033, 3019, 3291
PspEI GGTNACC 1 cut(s) 2677
PspFI CCCAGC 3 cut(s) 289, 483, 1557
PspGI CCWGG 5 cut(s) 443, 783, 1033, 3019, 3291
PspN4I GGNNCC 2 cut(s) 344, 722
PspPI GGNCC 4 cut(s) 292, 1031, 1771, 3404
PstI CTGCAG 1 cut(s) 2324
PstNI CAGNNNCTG 1 cut(s) 923
PsuI RGATCY 5 cut(s) 720, 1496, 1844, 2026, 2374
PvuII CAGCTG 1 cut(s) 452
RsaI GTAC 4 cut(s) 2836, 2849, 3141, 3349
RsaNI GTAC 4 cut(s) 2835, 2848, 3140, 3348
RseI CAYNNNNRTG 3 cut(s) 128, 647, 1679
SacI GAGCTC 1 cut(s) 366
SatI GCNGC 6 cut(s) 183, 341, 453, 802, 924, 2437
Sau96I GGNCC 4 cut(s) 292, 1031, 1771, 3404
ScaI AGTACT 1 cut(s) 2849
SchI GAGTC 4 cut(s) 203, 309, 1809, 3441
ScrFI CCNGG 6 cut(s) 445, 785, 1035, 3021, 3293, 3408
SduI GDGCHC 1 cut(s) 366
SfaNI GCATC 6 cut(s) 1084, 1201, 1521, 2381, 2870, 2924
SfcI CTRYAG 1 cut(s) 2320
SinI GGWCC 2 cut(s) 1031, 1771
SmiMI CAYNNNNRTG 3 cut(s) 128, 647, 1679
SmlI CTYRAG 7 cut(s) 146, 1640, 1810, 1840, 2015, 2744, 3380
SmoI CTYRAG 7 cut(s) 146, 1640, 1810, 1840, 2015, 2744, 3380
SphI GCATGC 1 cut(s) 733
SseBI AGGCCT 2 cut(s) 169, 1788
SsiI CCGC 5 cut(s) 70, 340, 658, 733, 940
SspI AATATT 2 cut(s) 79, 3031
SspMI CTAG 3 cut(s) 198, 845, 1487
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 2 cut(s) 169, 1788
StyD4I CCNGG 6 cut(s) 443, 783, 1033, 3019, 3291, 3406
StyI CCWWGG 2 cut(s) 724, 1669
TaaI ACNGT 4 cut(s) 754, 1527, 1578, 3368
TaiI ACGT 3 cut(s) 1603, 2227, 2946
TaqI TCGA 5 cut(s) 1299, 1529, 1821, 2121, 3228
TaqII GACCGA 2 cut(s) 153, 810
TatI WGTACW 3 cut(s) 2834, 2847, 3139
TauI GCSGC 1 cut(s) 343
TscAI CASTG 4 cut(s) 1282, 2847, 3578, 3584
TseFI GTSAC 4 cut(s) 1016, 1432, 2633, 2677
TseI GCWGC 5 cut(s) 182, 452, 801, 923, 2436
Tsp45I GTSAC 4 cut(s) 1016, 1432, 2633, 2677
TspGWI ACGGA 4 cut(s) 492, 598, 2652, 3425
TspRI CASTG 4 cut(s) 1282, 2847, 3578, 3584
Van91I CCANNNNNTGG 2 cut(s) 1675, 2804
Vha464I CTTAAG 2 cut(s) 1640, 1840
VpaK11BI GGWCC 2 cut(s) 1031, 1771
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 2 cut(s) 880, 3056
XmiI GTMKAC 2 cut(s) 614, 2809
XmnI GAANNNNTTC 7 cut(s) 652, 864, 1134, 1566, 1660, 2966, 3003
XspI CTAG 3 cut(s) 198, 845, 1487
ZrmI AGTACT 1 cut(s) 2849
Zsp2I ATGCAT 3 cut(s) 281, 1536, 2863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.