RchiOBHm_Chr6g0250931

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000105
Physical Location & Seq
Forward (+)
6213189 .. 6216563
3375 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22494

Sequence Viewer

Length: 2019 bp
ATGGTAATGGACTTGCCTGAGTTAGAAGGGGCTCATTGGAAACCAGAAGCCTTTTCAAATTTGTCTCAACTCAGTCTTCTTCATATTCGTAACGTGGATCTTCCAAAAGGCCTCACTTTTCTTTCTAATTCCTTGAGGCTCCTTGATTGGAGTGGGTACCCCTTAAGATCCCTCCCACAAGATTTTGAACCAGACGAACTTATTGAACTTAACTTGTGCCGCAGCAACATCGAACACCTCTGGGAAGGAGCAAAGAATTTTGACAAGTTAAAGTTCATCAGACTATGCCATTCTCAAAAAATTGTCCAGACCCCAGACCTCACAGGCGTTCAAAATCTTGAGACTTTAGATCTTGAAGGATGCAAGACTTTGGTAGAACTTCATCAATCCGTCGGACAACTCAAAAGGCTTATTGTATTGAATCTTAAAGATTGCGAGAGTCTCGAGAGTCTGCCAAGTAAGATTGAAATGGAATCTCTTGAAACTTTAATTCTTTCTAACTGCTCAAAAGTTAAAAAGATTCCCGAGTTCGCTGGAAATATGGAGCGCTTATCAAAGCTTTGTCTCGATGAGACACCCATTGAAACACTACCTATGTCAATTGGATGCCTGAGTGGCCTTGCTTCGCTGAATCTGAGCAACTGCAAAAATCTTGTTTGCTTTCCAAGCACCTTTAGCAGATTGGAGTCTCTTCAAAAGCTTGATCTTTCTGGATGTTTGAAACTTGGCAAACAGGATAGTGCGAGGGAGAATGGTGCAATTAGAACTGCTGTAAATCATCTTACAGAACGTGGTTGTGCAGTTGTTGGGAAATATTTGTCATGGTTCTTGCCTACTAGATTCGTGCAAAGAGCCAATATAGATCCAATGAGTATGCAGTTGCCTATATCTGATCTGTGTTATTCTCCAGAGCAAAATGCAAATACATCAATGAGTATCTGGTTGCCACTATCTCGTCTATGTAATTTAACAGATCTAAACATAAGTAACTGCAATCTTGGTGACGCTGCATTTGCCAACTTTGCCTGTTTCCCCTCCTTAGTGGCACTAAATCTGAGTGGAAATAATTTTGTTAAGCTTCCTCCAAGCATCAGCTCCTGTTTTAAGCTTCAGAACATTAATTTGGAGAATTGCAAGACACTTCAAGAGTTGTCAGGACTTCCATCAAATAGTAAATTGGATGTGAGGGCAGATGGTTGTTCTTCACTGGAAATGCTGTTTGATGTATCCAAATTCGATAGATTGGAGACATCATATTTCAATTTCATCAATTGCTTTAAACTAAATGACAATCAGGGCTGCAGTAACATCGCATTTGAAATGCTGAGGATATTCCTTAATCAGCAAATTTCTAGTGCGACGGAAACTTTTCAAATTGTAATTCCTGGAAGTAGAATTCCTGAGTGGTTTGATTATCAAGGATTTGGGAGTTCATTAACTGTAGACTTACTTCCAGGTTGGAAAAAGAGCAGGTTTTTGGGATTTGTTTTGTGTGCTGTTTTTGTACTCCATGTGCACCGTCAGGTTGATGAGCTTGATGCCTGTCAATTCAAGACTTTTAAGGCTACTCATCACCTTGTATGTTGCCTGAAGCTCAATGGAAGAGAATTAGAAGTATACGGCAAACAGCCTGCATTTCGCTTTAGCGAACAATTTTGCCAGGTTGAGTTGGATCATCTTTGGATATTCTATGTGTCCCGTGATAAATACTTTGGTACAGATTGGTGGCATAACAGATGCAGTCAGCTTGAGTTCTTATTTGAAACAAGAGGGCCAGGTCTGAAGGTGAAGGAGTGTGGGGTACGTCTGATATATGAGCAAGATGTGCTAGAGTTGAACCAAACAGTAACTCAATCAAGCAGTAGGATGTCTCCTTCATATGAGGATATATTGATTGATTTTGAGAATCGAGTTGAAGGGGAAACCAGTGGTACTGGTAGCAGAACCTGCACCCTTGAAGAACTATATTGGCAGAAAAAAGGGGATTCAATACCGGCCACTTTGAAAAACCAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

672

Amino Acids

76.1

Weight (kDa)

5.56

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 69 - 187 5.6e-07 Leucine-rich repeat region
LRR_13 PF23286 158 - 243 3.1e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 169 - 238 4e-06 Leucine-rich repeat region
C-JID PF20160 461 - 609 1.8e-17 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1461, 1955
Acc65I GGTACC 1 cut(s) 156
AccB1I GGYRCC 1 cut(s) 156
AccI GTMKAC 2 cut(s) 1443, 1617
AciI CCGC 1 cut(s) 220
AclWI GGATC 4 cut(s) 105, 162, 857, 1680
AcoI YGGCCR 1 cut(s) 1995
AcsI RAATTY 5 cut(s) 58, 256, 1232, 1347, 1395
AcuI CTGAAG 3 cut(s) 1094, 1610, 1802
AfaI GTAC 5 cut(s) 158, 1506, 1717, 1803, 1933
AfeI AGCGCT 1 cut(s) 548
AflII CTTAAG 1 cut(s) 163
AjnI CCWGG 4 cut(s) 1384, 1453, 1659, 1774
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
AluBI AGCT 8 cut(s) 559, 700, 1078, 1095, 1108, 1534, 1594, 1747
AluI AGCT 8 cut(s) 559, 700, 1078, 1095, 1108, 1534, 1594, 1747
Alw21I GWGCWC 1 cut(s) 1518
Alw26I GTCTC 8 cut(s) 69, 335, 446, 566, 569, 693, 1241, 1875
Alw44I GTGCAC 1 cut(s) 1514
AlwI GGATC 4 cut(s) 105, 162, 857, 1680
AlwNI CAGNNNCTG 2 cut(s) 1098, 1947
Ama87I CYCGRG 2 cut(s) 443, 524
Aor51HI AGCGCT 1 cut(s) 548
AoxI GGCC 4 cut(s) 109, 616, 1772, 1995
ApaLI GTGCAC 1 cut(s) 1514
ApeKI GCWGC 3 cut(s) 222, 1007, 1299
ApoI RAATTY 5 cut(s) 58, 256, 1232, 1347, 1395
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
AseI ATTAAT 1 cut(s) 1119
Asp700I GAANNNNTTC 1 cut(s) 1368
Asp718I GGTACC 1 cut(s) 156
AspLEI GCGC 1 cut(s) 549
AspS9I GGNCC 1 cut(s) 1772
AsuHPI GGTGA 3 cut(s) 1013, 1565, 1798
AvaI CYCGRG 2 cut(s) 443, 524
BaeGI GKGCMC 1 cut(s) 1518
BanI GGYRCC 1 cut(s) 156
BanII GRGCYC 1 cut(s) 34
BarI GAAGNNNNNNTAC 2 cut(s) 1434, 1466
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 1518
BbvCI CCTCAGC 1 cut(s) 1325
BbvI GCAGC 3 cut(s) 234, 994, 1286
BccI CCATC 2 cut(s) 1171, 1187
BceAI ACGGC 1 cut(s) 1636
BcgI CGANNNNNNTGC 4 cut(s) 211, 245, 1291, 1325
BciT130I CCWGG 4 cut(s) 1386, 1455, 1661, 1776
BciVI GTATCC 1 cut(s) 1237
BcoDI GTCTC 8 cut(s) 69, 335, 446, 566, 569, 693, 1241, 1875
BfaI CTAG 3 cut(s) 837, 1353, 1829
BfmI CTRYAG 2 cut(s) 1300, 1440
BfoI RGCGCY 1 cut(s) 550
BfrI CTTAAG 1 cut(s) 163
BfuAI ACCTGC 2 cut(s) 1461, 1955
BfuI GTATCC 1 cut(s) 1237
BglI GCCNNNNNGGC 1 cut(s) 615
BglII AGATCT 2 cut(s) 349, 973
BisI GCNGC 4 cut(s) 220, 223, 1008, 1300
BlsI GCNGC 4 cut(s) 221, 224, 1009, 1301
Bme1390I CCNGG 4 cut(s) 1386, 1455, 1661, 1776
BmeT110I CYCGRG 2 cut(s) 443, 524
BmgT120I GGNCC 1 cut(s) 1772
BmiI GGNNCC 2 cut(s) 140, 158
BmrFI CCNGG 4 cut(s) 1386, 1455, 1661, 1776
BmsI GCATC 5 cut(s) 350, 596, 1098, 1528, 1727
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 891
Bpu10I CCTNAGC 1 cut(s) 1325
BpuEI CTTGAG 3 cut(s) 154, 359, 1769
Bse118I RCCGGY 1 cut(s) 1993
Bse1I ACTGG 3 cut(s) 1212, 1926, 1939
BseBI CCWGG 4 cut(s) 1386, 1455, 1661, 1776
BseGI GGATG 5 cut(s) 365, 611, 719, 1186, 1872
BseMII CTCAG 7 cut(s) 9, 85, 602, 626, 1046, 1316, 1392
BseNI ACTGG 3 cut(s) 1212, 1926, 1939
BseSI GKGCMC 1 cut(s) 1518
BseXI GCAGC 3 cut(s) 234, 994, 1286
BsgI GTGCAG 2 cut(s) 819, 1933
BshFI GGCC 4 cut(s) 111, 618, 1774, 1997
BshNI GGYRCC 1 cut(s) 156
BsiHKAI GWGCWC 1 cut(s) 1518
BsiHKCI CYCGRG 2 cut(s) 443, 524
BsiSI CCGG 1 cut(s) 1994
BslFI GGGAC 1 cut(s) 1681
BsmAI GTCTC 8 cut(s) 69, 335, 446, 566, 569, 693, 1241, 1875
BsmFI GGGAC 1 cut(s) 1681
BsnI GGCC 4 cut(s) 111, 618, 1774, 1997
BsoBI CYCGRG 2 cut(s) 443, 524
Bsp1286I GDGCHC 2 cut(s) 34, 1518
Bsp143I GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
BspACI CCGC 1 cut(s) 220
BspANI GGCC 4 cut(s) 111, 618, 1774, 1997
BspCNI CTCAG 7 cut(s) 10, 84, 603, 627, 1047, 1317, 1393
BspLI GGNNCC 2 cut(s) 140, 158
BspMAI CTGCAG 1 cut(s) 1304
BspMI ACCTGC 2 cut(s) 1461, 1955
BspPI GGATC 4 cut(s) 105, 162, 857, 1680
BspT107I GGYRCC 1 cut(s) 156
BspTI CTTAAG 1 cut(s) 163
BsrFI RCCGGY 1 cut(s) 1993
BsrI ACTGG 3 cut(s) 1212, 1926, 1939
BssAI RCCGGY 1 cut(s) 1993
BssMI GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
BssNAI GTATAC 1 cut(s) 1618
Bst1107I GTATAC 1 cut(s) 1618
Bst2UI CCWGG 4 cut(s) 1386, 1455, 1661, 1776
Bst4CI ACNGT 3 cut(s) 1441, 1520, 1846
Bst6I CTCTTC 2 cut(s) 696, 1597
BstAFI CTTAAG 1 cut(s) 163
BstAPI GCANNNNNTGC 2 cut(s) 1825, 1947
BstC8I GCNNGC 1 cut(s) 1632
BstDEI CTNAG 8 cut(s) 18, 71, 611, 635, 1039, 1055, 1325, 1401
BstF5I GGATG 5 cut(s) 365, 611, 719, 1186, 1872
BstH2I RGCGCY 1 cut(s) 550
BstHHI GCGC 1 cut(s) 549
BstKTI GATC 8 cut(s) 100, 170, 352, 706, 865, 895, 976, 1675
BstMAI GTCTC 8 cut(s) 69, 335, 446, 566, 569, 693, 1241, 1875
BstMBI GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
BstMWI GCNNNNNNNGC 7 cut(s) 615, 666, 675, 1013, 1022, 1825, 1947
BstNI CCWGG 4 cut(s) 1386, 1455, 1661, 1776
BstSCI CCNGG 4 cut(s) 1384, 1453, 1659, 1774
BstSFI CTRYAG 2 cut(s) 1300, 1440
BstSLI GKGCMC 1 cut(s) 1518
BstV1I GCAGC 3 cut(s) 234, 994, 1286
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 5 cut(s) 97, 167, 349, 862, 973
BstYI RGATCY 5 cut(s) 97, 167, 349, 862, 973
BstZ17I GTATAC 1 cut(s) 1618
BsuI GTATCC 1 cut(s) 1237
BsuRI GGCC 4 cut(s) 111, 618, 1774, 1997
BtgZI GCGATG 1 cut(s) 1294
BtsCI GGATG 5 cut(s) 365, 611, 719, 1186, 1872
BtsIMutI CAGTG 2 cut(s) 1205, 1933
BveI ACCTGC 2 cut(s) 1461, 1955
Cac8I GCNNGC 1 cut(s) 1632
CaiI CAGNNNCTG 2 cut(s) 1098, 1947
CfoI GCGC 1 cut(s) 549
Cfr10I RCCGGY 1 cut(s) 1993
Cfr13I GGNCC 1 cut(s) 1772
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 5 cut(s) 157, 1505, 1716, 1802, 1932
CviAII CATG 2 cut(s) 822, 1511
CviQI GTAC 5 cut(s) 157, 1505, 1716, 1802, 1932
DdeI CTNAG 8 cut(s) 18, 71, 611, 635, 1039, 1055, 1325, 1401
DpnI GATC 8 cut(s) 99, 169, 351, 705, 864, 894, 975, 1674
DpnII GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
DraI TTTAAA 1 cut(s) 1279
EaeI YGGCCR 1 cut(s) 1995
Eam1104I CTCTTC 2 cut(s) 696, 1597
EarI CTCTTC 2 cut(s) 696, 1597
Eco147I AGGCCT 1 cut(s) 111
Eco24I GRGCYC 1 cut(s) 34
Eco47III AGCGCT 1 cut(s) 548
Eco57I CTGAAG 3 cut(s) 1094, 1610, 1802
Eco88I CYCGRG 2 cut(s) 443, 524
EcoRI GAATTC 1 cut(s) 1395
EcoRII CCWGG 4 cut(s) 1384, 1453, 1659, 1774
EcoT38I GRGCYC 1 cut(s) 34
FaeI CATG 2 cut(s) 825, 1514
FaqI GGGAC 1 cut(s) 1681
FatI CATG 2 cut(s) 821, 1510
FauNDI CATATG 1 cut(s) 1879
FblI GTMKAC 2 cut(s) 1443, 1617
Fnu4HI GCNGC 4 cut(s) 220, 223, 1008, 1300
FokI GGATG 5 cut(s) 372, 618, 726, 1193, 1879
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 4 cut(s) 220, 223, 1008, 1300
FspBI CTAG 3 cut(s) 837, 1353, 1829
GlaI GCGC 1 cut(s) 548
GluI GCNGC 4 cut(s) 220, 223, 1008, 1300
GsuI CTGGAG 1 cut(s) 891
HaeII RGCGCY 1 cut(s) 550
HaeIII GGCC 4 cut(s) 111, 618, 1774, 1997
HapII CCGG 1 cut(s) 1994
HgaI GACGC 1 cut(s) 1013
HhaI GCGC 1 cut(s) 549
Hin1II CATG 2 cut(s) 825, 1514
Hin6I GCGC 1 cut(s) 547
HinP1I GCGC 1 cut(s) 547
HindIII AAGCTT 4 cut(s) 557, 698, 1076, 1106
HpaII CCGG 1 cut(s) 1994
HphI GGTGA 3 cut(s) 1013, 1565, 1798
Hpy166II GTNNAC 3 cut(s) 1444, 1516, 1618
Hpy188I TCNGA 8 cut(s) 281, 395, 636, 892, 1056, 1113, 1782, 1809
Hpy8I GTNNAC 3 cut(s) 1444, 1516, 1618
Hpy99I CGWCG 2 cut(s) 395, 1363
HpyAV CCTTC 7 cut(s) 20, 239, 350, 1777, 1783, 1884, 1910
HpyCH4III ACNGT 3 cut(s) 1441, 1520, 1846
HpyCH4IV ACGT 3 cut(s) 93, 790, 1804
HpyF10VI GCNNNNNNNGC 7 cut(s) 615, 666, 675, 1013, 1022, 1825, 1947
HpyF3I CTNAG 8 cut(s) 18, 71, 611, 635, 1039, 1055, 1325, 1401
HpySE526I ACGT 3 cut(s) 93, 790, 1804
Hsp92II CATG 2 cut(s) 825, 1514
HspAI GCGC 1 cut(s) 547
KpnI GGTACC 1 cut(s) 160
Kzo9I GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
LmnI GCTCC 4 cut(s) 144, 248, 544, 1100
Lsp1109I GCAGC 3 cut(s) 234, 994, 1286
LweI GCATC 5 cut(s) 350, 596, 1098, 1528, 1727
MaeI CTAG 3 cut(s) 837, 1353, 1829
MaeII ACGT 3 cut(s) 93, 790, 1804
MaeIII GTNAC 5 cut(s) 89, 986, 1001, 1304, 1846
MalI GATC 8 cut(s) 99, 169, 351, 705, 864, 894, 975, 1674
MboI GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
MboII GAAGA 7 cut(s) 68, 71, 92, 683, 1194, 1614, 1970
MfeI CAATTG 2 cut(s) 600, 1270
MflI RGATCY 5 cut(s) 97, 167, 349, 862, 973
MhlI GDGCHC 2 cut(s) 34, 1518
MlyI GAGTC 3 cut(s) 448, 457, 695
MmeI TCCRAC 3 cut(s) 373, 1439, 1650
MroXI GAANNNNTTC 1 cut(s) 1368
MspCI CTTAAG 1 cut(s) 163
MspI CCGG 1 cut(s) 1994
MspR9I CCNGG 4 cut(s) 1386, 1455, 1661, 1776
MunI CAATTG 2 cut(s) 600, 1270
MvaI CCWGG 4 cut(s) 1386, 1455, 1661, 1776
MwoI GCNNNNNNNGC 7 cut(s) 615, 666, 675, 1013, 1022, 1825, 1947
NdeI CATATG 1 cut(s) 1879
NdeII GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
NlaIII CATG 2 cut(s) 825, 1514
NlaIV GGNNCC 2 cut(s) 140, 158
NmuCI GTSAC 1 cut(s) 1001
PaeR7I CTCGAG 1 cut(s) 443
PceI AGGCCT 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 1368
PfeI GAWTC 7 cut(s) 421, 473, 520, 631, 840, 1906, 1985
PfoI TCCNGGA 1 cut(s) 1384
PkrI GCNGC 4 cut(s) 221, 224, 1009, 1301
PleI GAGTC 3 cut(s) 447, 456, 694
PpsI GAGTC 3 cut(s) 447, 456, 694
PshBI ATTAAT 1 cut(s) 1119
Psp6I CCWGG 4 cut(s) 1384, 1453, 1659, 1774
PspGI CCWGG 4 cut(s) 1384, 1453, 1659, 1774
PspN4I GGNNCC 2 cut(s) 140, 158
PspPI GGNCC 1 cut(s) 1772
PstI CTGCAG 1 cut(s) 1304
PstNI CAGNNNCTG 2 cut(s) 1098, 1947
PsuI RGATCY 5 cut(s) 97, 167, 349, 862, 973
RsaI GTAC 5 cut(s) 158, 1506, 1717, 1803, 1933
RsaNI GTAC 5 cut(s) 157, 1505, 1716, 1802, 1932
SatI GCNGC 4 cut(s) 220, 223, 1008, 1300
Sau3AI GATC 8 cut(s) 97, 167, 349, 703, 862, 892, 973, 1672
Sau96I GGNCC 1 cut(s) 1772
SchI GAGTC 3 cut(s) 448, 457, 695
ScrFI CCNGG 4 cut(s) 1386, 1455, 1661, 1776
SduI GDGCHC 2 cut(s) 34, 1518
SfaNI GCATC 5 cut(s) 350, 596, 1098, 1528, 1727
SfcI CTRYAG 2 cut(s) 1300, 1440
Sfr274I CTCGAG 1 cut(s) 443
SlaI CTCGAG 1 cut(s) 443
SmlI CTYRAG 5 cut(s) 133, 163, 338, 443, 1748
SmoI CTYRAG 5 cut(s) 133, 163, 338, 443, 1748
SseBI AGGCCT 1 cut(s) 111
SsiI CCGC 1 cut(s) 220
SspI AATATT 1 cut(s) 815
SspMI CTAG 3 cut(s) 837, 1353, 1829
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 4 cut(s) 1384, 1453, 1659, 1774
TaaI ACNGT 3 cut(s) 1441, 1520, 1846
TaiI ACGT 3 cut(s) 96, 793, 1807
TaqI TCGA 5 cut(s) 231, 444, 567, 1236, 1909
TatI WGTACW 1 cut(s) 1504
TauI GCSGC 1 cut(s) 222
TfiI GAWTC 7 cut(s) 421, 473, 520, 631, 840, 1906, 1985
TscAI CASTG 2 cut(s) 1212, 1933
TseFI GTSAC 1 cut(s) 1001
TseI GCWGC 3 cut(s) 222, 1007, 1299
Tsp45I GTSAC 1 cut(s) 1001
TspDTI ATGAA 6 cut(s) 71, 265, 371, 1255, 1422, 1866
TspGWI ACGGA 2 cut(s) 379, 1376
TspRI CASTG 2 cut(s) 1212, 1933
Vha464I CTTAAG 1 cut(s) 163
VneI GTGCAC 1 cut(s) 1514
VspI ATTAAT 1 cut(s) 1119
XapI RAATTY 5 cut(s) 58, 256, 1232, 1347, 1395
XhoI CTCGAG 1 cut(s) 443
XmiI GTMKAC 2 cut(s) 1443, 1617
XmnI GAANNNNTTC 1 cut(s) 1368
XspI CTAG 3 cut(s) 837, 1353, 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.