RchiOBHm_Chr1g0323401

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000105
Physical Location & Seq
Forward (+)
10879812 .. 10881568
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55331

Sequence Viewer

Length: 1107 bp
ATGGATTCCCGCATTCATGATCTAATAAGCAATTACATATATCCACAGCTTGGTGGGGTGCGTTTTATAGGGATCCATGGCATGCGGGGCATAGGTAAGACAACACTTGCTCGAGCTATCCATGATGATATTTGTCAGGATTTTGACCGAACCTGCTTTCTTTCCAATGTTAGAGAAATGTCTAAAAACAATGGCCTAGTTTCTCTACAAGAAAAACTTCTTTCCAAAATCCTGATGGCAAAAATTAAAAATATAGAGGATGAATACACAGGAGCTGCTATGATAGGAAGGCGGTTGTGTAGAATAAAGGTGCTTGTTGTTATTGATGATGTGGATCAGTTGACAAAATTAGAGAAATTGGCTGAAAGTCGCAACTGGTTTGGTCCAGGGAGTAGAATCATCATAACCACCACAGATTTTCAGTTGCTAAAGGCACATGATGTTGATGCTACATACAAGGCTAACGGGTTAAACTCTAATGAAGCACTTCAACTTTTGAGTTTGAAGGCTTTTAAGAAATTTCCCCCACCAGAAGATTATTTGCACCTGTGCCACCATATTTTAGGGTATGCTCAGGGGCTTCCATTGGCTCTCGTGGTTTTAGGTTCTTTTCTCTTTGGTAGAAGCACTGATGAATGGACAAGTGCAACAGATAGGCTAAAGAACACACCACATAAACGCATTATTGAGGTGCTTTGGATTAGTTTTGATGGACTGGATGAAAGGGACAGAGAAATATTCCTACATATTGCTTGCTTTTACAAGGGGAAGGATAAGGATCGTGTGACACAAATACTAGACTATTGCCAGCTAGACCCTGTCATTGGTTTAAGTGTTCTTGCAGATAGATCTCTAATAACTTTCTCCAACAACGAACTGTGGATGCATGATTTGCTACAAGAAATGGGCTGGGAAATTGTTCGGGAACAGTCTCCTAAAGAGCCAGGCAAACGTAGTAGATTATGGTCTCATGAAGACATCAACGATGTGCTGAAGGGAAATAAGGGAACAGATTCAATCCAAGGCAAGGTAATGGAGTTGACTAAATTACAAGTGGCTCATTGGAATCCAGAAGCCTTTTCAAATTTGTCTCAACTGAGTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

368

Amino Acids

41.91

Weight (kDa)

6.64

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 19 - 173 4.6e-19 NB-ARC domain
NACHT PF05729 23 - 120 4.1e-07 NACHT domain
WHD_ROQ1 PF23282 241 - 311 6.2e-22 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 161
AccB7I CCANNNNNTGG 1 cut(s) 50
AciI CCGC 3 cut(s) 10, 85, 292
AclWI GGATC 4 cut(s) 67, 80, 342, 786
AcsI RAATTY 2 cut(s) 518, 1084
AcuI CTGAAG 1 cut(s) 1013
AfiI CCNNNNNNNGG 3 cut(s) 50, 824, 1027
AgsI TTSAA 4 cut(s) 491, 505, 1017, 1083
AjnI CCWGG 2 cut(s) 385, 943
AluBI AGCT 4 cut(s) 49, 116, 275, 811
AluI AGCT 4 cut(s) 49, 116, 275, 811
Alw26I GTCTC 3 cut(s) 936, 972, 1095
AlwI GGATC 4 cut(s) 67, 80, 342, 786
AlwNI CAGNNNCTG 1 cut(s) 275
Ama87I CYCGRG 1 cut(s) 111
AoxI GGCC 1 cut(s) 193
ApeKI GCWGC 1 cut(s) 275
ApoI RAATTY 2 cut(s) 518, 1084
Asp700I GAANNNNTTC 4 cut(s) 216, 486, 918, 1012
AspS9I GGNCC 1 cut(s) 383
AvaI CYCGRG 1 cut(s) 111
AvaII GGWCC 1 cut(s) 383
BamHI GGATCC 1 cut(s) 72
BauI CACGAG 1 cut(s) 593
BbsI GAAGAC 1 cut(s) 981
BbvI GCAGC 1 cut(s) 262
BccI CCATC 2 cut(s) 229, 704
BciT130I CCWGG 2 cut(s) 387, 945
BcoDI GTCTC 3 cut(s) 936, 972, 1095
BfaI CTAG 3 cut(s) 197, 797, 812
BfuAI ACCTGC 1 cut(s) 161
BglII AGATCT 1 cut(s) 848
BisI GCNGC 1 cut(s) 276
BlsI GCNGC 1 cut(s) 277
Bme1390I CCNGG 2 cut(s) 387, 945
Bme18I GGWCC 1 cut(s) 383
BmeT110I CYCGRG 1 cut(s) 111
BmgT120I GGNCC 1 cut(s) 383
BmiI GGNNCC 1 cut(s) 74
BmrFI CCNGG 2 cut(s) 387, 945
BmsI GCATC 2 cut(s) 436, 873
BpiI GAAGAC 1 cut(s) 981
Bpu10I CCTNAGC 1 cut(s) 573
BsaBI GATNNNNATC 2 cut(s) 333, 777
BsaI GGTCTC 1 cut(s) 972
BsaJI CCNNGG 3 cut(s) 76, 386, 1021
Bsc4I CCNNNNNNNGG 3 cut(s) 50, 824, 1027
Bse1I ACTGG 2 cut(s) 380, 720
Bse8I GATNNNNATC 2 cut(s) 333, 777
BseBI CCWGG 2 cut(s) 387, 945
BseDI CCNNGG 3 cut(s) 76, 386, 1021
BseGI GGATG 3 cut(s) 265, 724, 888
BseJI GATNNNNATC 2 cut(s) 333, 777
BseLI CCNNNNNNNGG 3 cut(s) 50, 824, 1027
BseMII CTCAG 2 cut(s) 587, 1088
BseNI ACTGG 2 cut(s) 380, 720
BseXI GCAGC 1 cut(s) 262
BseYI CCCAGC 1 cut(s) 909
BshFI GGCC 1 cut(s) 195
BsiHKCI CYCGRG 1 cut(s) 111
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 3 cut(s) 50, 824, 1027
BsmAI GTCTC 3 cut(s) 936, 972, 1095
BsmFI GGGAC 1 cut(s) 740
BsmI GAATGC 1 cut(s) 12
BsnI GGCC 1 cut(s) 195
Bso31I GGTCTC 1 cut(s) 972
BsoBI CYCGRG 1 cut(s) 111
Bsp143I GATC 5 cut(s) 19, 72, 334, 778, 848
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 3 cut(s) 10, 85, 292
BspANI GGCC 1 cut(s) 195
BspCNI CTCAG 2 cut(s) 586, 1089
BspHI TCATGA 2 cut(s) 16, 970
BspLI GGNNCC 1 cut(s) 74
BspMI ACCTGC 1 cut(s) 161
BspPI GGATC 4 cut(s) 67, 80, 342, 786
BspTNI GGTCTC 1 cut(s) 972
BsrI ACTGG 2 cut(s) 380, 720
BssECI CCNNGG 3 cut(s) 76, 386, 1021
BssMI GATC 5 cut(s) 19, 72, 334, 778, 848
BssSI CACGAG 1 cut(s) 593
BssT1I CCWWGG 2 cut(s) 76, 1021
Bst2BI CACGAG 1 cut(s) 593
Bst2UI CCWGG 2 cut(s) 387, 945
Bst4CI ACNGT 2 cut(s) 879, 930
BstAPI GCANNNNNTGC 1 cut(s) 892
BstC8I GCNNGC 3 cut(s) 83, 754, 809
BstDEI CTNAG 2 cut(s) 573, 1097
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 265, 724, 888
BstKTI GATC 5 cut(s) 22, 75, 337, 781, 851
BstMAI GTCTC 3 cut(s) 936, 972, 1095
BstMBI GATC 5 cut(s) 19, 72, 334, 778, 848
BstMWI GCNNNNNNNGC 2 cut(s) 87, 892
BstNI CCWGG 2 cut(s) 387, 945
BstNSI RCATGY 1 cut(s) 85
BstSCI CCNGG 2 cut(s) 385, 943
BstV1I GCAGC 1 cut(s) 262
BstV2I GAAGAC 1 cut(s) 981
BstX2I RGATCY 2 cut(s) 72, 848
BstYI RGATCY 2 cut(s) 72, 848
BsuRI GGCC 1 cut(s) 195
BtgI CCRYGG 1 cut(s) 76
BtsCI GGATG 3 cut(s) 265, 724, 888
BtsIMutI CAGTG 1 cut(s) 627
BveI ACCTGC 1 cut(s) 161
Cac8I GCNNGC 3 cut(s) 83, 754, 809
CaiI CAGNNNCTG 1 cut(s) 275
CciI TCATGA 2 cut(s) 16, 970
Cfr13I GGNCC 1 cut(s) 383
CviAII CATG 7 cut(s) 17, 77, 82, 122, 437, 887, 971
DdeI CTNAG 2 cut(s) 573, 1097
DpnI GATC 5 cut(s) 21, 74, 336, 780, 850
DpnII GATC 5 cut(s) 19, 72, 334, 778, 848
Eco130I CCWWGG 2 cut(s) 76, 1021
Eco31I GGTCTC 1 cut(s) 972
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 1 cut(s) 1013
Eco88I CYCGRG 1 cut(s) 111
EcoRII CCWGG 2 cut(s) 385, 943
EcoT14I CCWWGG 2 cut(s) 76, 1021
EcoT22I ATGCAT 1 cut(s) 888
ErhI CCWWGG 2 cut(s) 76, 1021
FaeI CATG 7 cut(s) 20, 80, 85, 125, 440, 890, 974
FalI AAGNNNNNCTT 2 cut(s) 201, 233
FaqI GGGAC 1 cut(s) 740
FatI CATG 7 cut(s) 16, 76, 81, 121, 436, 886, 970
FauI CCCGC 2 cut(s) 17, 78
Fnu4HI GCNGC 1 cut(s) 276
FokI GGATG 3 cut(s) 272, 731, 895
Fsp4HI GCNGC 1 cut(s) 276
FspBI CTAG 3 cut(s) 197, 797, 812
GluI GCNGC 1 cut(s) 276
GsaI CCCAGC 1 cut(s) 913
HaeIII GGCC 1 cut(s) 195
Hin1II CATG 7 cut(s) 20, 80, 85, 125, 440, 890, 974
HincII GTYRAC 2 cut(s) 342, 1041
HindII GTYRAC 2 cut(s) 342, 1041
HinfI GANTC 4 cut(s) 5, 396, 1013, 1066
Hpy166II GTNNAC 2 cut(s) 342, 1041
Hpy188III TCNNGA 6 cut(s) 17, 137, 232, 923, 971, 1070
Hpy8I GTNNAC 2 cut(s) 342, 1041
HpyAV CCTTC 4 cut(s) 282, 499, 763, 988
HpyCH4III ACNGT 2 cut(s) 879, 930
HpyCH4IV ACGT 1 cut(s) 952
HpyCH4V TGCA 4 cut(s) 544, 647, 842, 886
HpyF10VI GCNNNNNNNGC 2 cut(s) 87, 892
HpyF3I CTNAG 2 cut(s) 573, 1097
HpySE526I ACGT 1 cut(s) 952
Hsp92II CATG 7 cut(s) 20, 80, 85, 125, 440, 890, 974
Kzo9I GATC 5 cut(s) 19, 72, 334, 778, 848
LmnI GCTCC 1 cut(s) 272
Lsp1109I GCAGC 1 cut(s) 262
LweI GCATC 2 cut(s) 436, 873
MaeI CTAG 3 cut(s) 197, 797, 812
MaeII ACGT 1 cut(s) 952
MaeIII GTNAC 1 cut(s) 784
MalI GATC 5 cut(s) 21, 74, 336, 780, 850
MboI GATC 5 cut(s) 19, 72, 334, 778, 848
MboII GAAGA 2 cut(s) 545, 986
MflI RGATCY 2 cut(s) 72, 848
MluCI AATT 8 cut(s) 31, 243, 347, 356, 518, 915, 1046, 1084
MmeI TCCRAC 1 cut(s) 891
MnlI CCTC 2 cut(s) 250, 682
Mph1103I ATGCAT 1 cut(s) 888
MroXI GAANNNNTTC 4 cut(s) 216, 486, 918, 1012
MseI TTAA 5 cut(s) 246, 470, 513, 830, 1105
MspR9I CCNGG 2 cut(s) 387, 945
Mva1269I GAATGC 1 cut(s) 12
MvaI CCWGG 2 cut(s) 387, 945
MwoI GCNNNNNNNGC 2 cut(s) 87, 892
NcoI CCATGG 1 cut(s) 76
NdeII GATC 5 cut(s) 19, 72, 334, 778, 848
NlaIII CATG 7 cut(s) 20, 80, 85, 125, 440, 890, 974
NlaIV GGNNCC 1 cut(s) 74
NmuCI GTSAC 1 cut(s) 784
NsiI ATGCAT 1 cut(s) 888
NspI RCATGY 1 cut(s) 85
PaeI GCATGC 1 cut(s) 85
PaeR7I CTCGAG 1 cut(s) 111
PagI TCATGA 2 cut(s) 16, 970
PctI GAATGC 1 cut(s) 12
PdmI GAANNNNTTC 4 cut(s) 216, 486, 918, 1012
PfeI GAWTC 4 cut(s) 5, 396, 1013, 1066
PflFI GACNNNGTC 1 cut(s) 818
PflMI CCANNNNNTGG 1 cut(s) 50
PkrI GCNGC 1 cut(s) 277
Psp6I CCWGG 2 cut(s) 385, 943
PspFI CCCAGC 1 cut(s) 909
PspGI CCWGG 2 cut(s) 385, 943
PspN4I GGNNCC 1 cut(s) 74
PspPI GGNCC 1 cut(s) 383
PspXI VCTCGAGB 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 275
PsuI RGATCY 2 cut(s) 72, 848
PsyI GACNNNGTC 1 cut(s) 818
SaqAI TTAA 5 cut(s) 246, 470, 513, 830, 1105
SatI GCNGC 1 cut(s) 276
Sau3AI GATC 5 cut(s) 19, 72, 334, 778, 848
Sau96I GGNCC 1 cut(s) 383
ScrFI CCNGG 2 cut(s) 387, 945
SfaNI GCATC 2 cut(s) 436, 873
Sfr274I CTCGAG 1 cut(s) 111
SinI GGWCC 1 cut(s) 383
SlaI CTCGAG 1 cut(s) 111
SmlI CTYRAG 1 cut(s) 111
SmoI CTYRAG 1 cut(s) 111
SphI GCATGC 1 cut(s) 85
Sse9I AATT 8 cut(s) 31, 243, 347, 356, 518, 915, 1046, 1084
SsiI CCGC 3 cut(s) 10, 85, 292
SspI AATATT 1 cut(s) 738
SspMI CTAG 3 cut(s) 197, 797, 812
StyD4I CCNGG 2 cut(s) 385, 943
StyI CCWWGG 2 cut(s) 76, 1021
TaaI ACNGT 2 cut(s) 879, 930
TaiI ACGT 1 cut(s) 955
TaqI TCGA 1 cut(s) 112
TaqII GACCGA 1 cut(s) 162
TasI AATT 8 cut(s) 31, 243, 347, 356, 518, 915, 1046, 1084
TfiI GAWTC 4 cut(s) 5, 396, 1013, 1066
Tru1I TTAA 5 cut(s) 246, 470, 513, 830, 1105
Tru9I TTAA 5 cut(s) 246, 470, 513, 830, 1105
TscAI CASTG 1 cut(s) 634
TseFI GTSAC 1 cut(s) 784
TseI GCWGC 1 cut(s) 275
Tsp45I GTSAC 1 cut(s) 784
TspDTI ATGAA 6 cut(s) 5, 276, 495, 648, 735, 987
TspRI CASTG 1 cut(s) 634
Tth111I GACNNNGTC 1 cut(s) 818
Van91I CCANNNNNTGG 1 cut(s) 50
VpaK11BI GGWCC 1 cut(s) 383
XapI RAATTY 2 cut(s) 518, 1084
XceI RCATGY 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XhoI CTCGAG 1 cut(s) 111
XmnI GAANNNNTTC 4 cut(s) 216, 486, 918, 1012
XspI CTAG 3 cut(s) 197, 797, 812
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.