resistance protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1937 |
| Acc36I | ACCTGC | 3 cut(s) | 758, 1937, 3082 |
| AccB1I | GGYRCC | 1 cut(s) | 342 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 647, 1624, 3148 |
| AccI | GTMKAC | 2 cut(s) | 563, 2797 |
| AccII | CGCG | 3 cut(s) | 70, 72, 2700 |
| AciI | CCGC | 8 cut(s) | 72, 340, 607, 682, 889, 1005, 1909, 2560 |
| AclWI | GGATC | 7 cut(s) | 320, 333, 664, 677, 1383, 1532, 2503 |
| AcsI | RAATTY | 9 cut(s) | 117, 726, 1681, 1805, 1879, 2642, 2854, 3170, 3275 |
| AcuI | CTGAAG | 3 cut(s) | 2691, 2969, 3233 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 3 cut(s) | 2824, 3129, 3340 |
| AfeI | AGCGCT | 1 cut(s) | 1225 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 647, 1421, 1624, 2573, 3148, 3536 |
| AflII | CTTAAG | 1 cut(s) | 1786 |
| AflIII | ACRYGT | 1 cut(s) | 1739 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1779 |
| AjnI | CCWGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2729, 2761 |
| Alw21I | GWGCWC | 4 cut(s) | 147, 261, 2184, 3141 |
| AlwI | GGATC | 7 cut(s) | 320, 333, 664, 677, 1383, 1532, 2503 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 872 |
| Ama87I | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| Aor51HI | AGCGCT | 1 cut(s) | 1225 |
| AoxI | GGCC | 4 cut(s) | 292, 790, 1732, 2239 |
| ApeKI | GCWGC | 4 cut(s) | 182, 455, 872, 2124 |
| ApoI | RAATTY | 9 cut(s) | 117, 726, 1681, 1805, 1879, 2642, 2854, 3170, 3275 |
| AseI | ATTAAT | 1 cut(s) | 2111 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 813, 1083, 1515, 1609, 2954, 2991 |
| AspLEI | GCGC | 2 cut(s) | 72, 1226 |
| AspS9I | GGNCC | 3 cut(s) | 292, 980, 1720 |
| AsuHPI | GGTGA | 3 cut(s) | 115, 2633, 3290 |
| AvaI | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| AvaII | GGWCC | 2 cut(s) | 980, 1720 |
| BamHI | GGATCC | 2 cut(s) | 325, 669 |
| BanI | GGYRCC | 1 cut(s) | 342 |
| BanII | GRGCYC | 2 cut(s) | 147, 261 |
| BauI | CACGAG | 1 cut(s) | 1190 |
| BbsI | GAAGAC | 4 cut(s) | 304, 1578, 1691, 2957 |
| Bbv12I | GWGCWC | 4 cut(s) | 147, 261, 2184, 3141 |
| BbvI | GCAGC | 4 cut(s) | 169, 442, 859, 2111 |
| BccI | CCATC | 8 cut(s) | 826, 1301, 2013, 2303, 2371, 2794, 2810, 3150 |
| BceAI | ACGGC | 1 cut(s) | 2246 |
| BciT130I | CCWGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| BclI | TGATCA | 3 cut(s) | 721, 931, 2440 |
| BfaI | CTAG | 7 cut(s) | 104, 198, 794, 1394, 2121, 2801, 2867 |
| BfmI | CTRYAG | 1 cut(s) | 1533 |
| BfoI | RGCGCY | 1 cut(s) | 1227 |
| BfrI | CTTAAG | 1 cut(s) | 1786 |
| BfuAI | ACCTGC | 3 cut(s) | 758, 1937, 3082 |
| BglII | AGATCT | 3 cut(s) | 1445, 1790, 1972 |
| BisI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 2125 |
| BlsI | GCNGC | 5 cut(s) | 184, 342, 457, 874, 2126 |
| Bme1390I | CCNGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| Bme18I | GGWCC | 2 cut(s) | 980, 1720 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1779 |
| BmeT110I | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| BmgT120I | GGNCC | 3 cut(s) | 292, 980, 1720 |
| BmiI | GGNNCC | 3 cut(s) | 327, 344, 671 |
| BmrFI | CCNGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| BmrI | ACTGGG | 1 cut(s) | 1785 |
| BmsI | GCATC | 8 cut(s) | 1033, 1150, 2327, 2468, 2836, 2858, 2912, 3202 |
| BmuI | ACTGGG | 1 cut(s) | 1785 |
| BoxI | GACNNNNGTC | 1 cut(s) | 467 |
| BpiI | GAAGAC | 4 cut(s) | 304, 1578, 1691, 2957 |
| BpmI | CTGGAG | 1 cut(s) | 1610 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1170 |
| BpuEI | CTTGAG | 4 cut(s) | 1777, 1982, 2753, 3392 |
| BsaBI | GATNNNNATC | 2 cut(s) | 930, 1374 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 1569, 1925 |
| BsaJI | CCNNGG | 5 cut(s) | 673, 983, 1618, 2014, 2917 |
| BsaWI | WCCGGW | 1 cut(s) | 3145 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 288, 318 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 647, 1421, 1624, 2573, 3148, 3536 |
| Bse1I | ACTGG | 8 cut(s) | 84, 762, 977, 1317, 1780, 3530, 3546, 3559 |
| Bse8I | GATNNNNATC | 2 cut(s) | 930, 1374 |
| BseBI | CCWGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| BseDI | CCNNGG | 5 cut(s) | 673, 983, 1618, 2014, 2917 |
| BseJI | GATNNNNATC | 2 cut(s) | 930, 1374 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 647, 1421, 1624, 2573, 3148, 3536 |
| BseMII | CTCAG | 5 cut(s) | 456, 1184, 2080, 2225, 2594 |
| BseNI | ACTGG | 8 cut(s) | 84, 762, 977, 1317, 1780, 3530, 3546, 3559 |
| BseRI | GAGGAG | 2 cut(s) | 206, 3518 |
| BseXI | GCAGC | 4 cut(s) | 169, 442, 859, 2111 |
| BseYI | CCCAGC | 3 cut(s) | 289, 1506, 3397 |
| Bsh1236I | CGCG | 3 cut(s) | 70, 72, 2700 |
| BshFI | GGCC | 4 cut(s) | 294, 792, 1734, 2241 |
| BshNI | GGYRCC | 1 cut(s) | 342 |
| BsiHKAI | GWGCWC | 4 cut(s) | 147, 261, 2184, 3141 |
| BsiHKCI | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| BsiSI | CCGG | 1 cut(s) | 3146 |
| BslFI | GGGAC | 2 cut(s) | 1104, 1767 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 647, 1421, 1624, 2573, 3148, 3536 |
| BsmFI | GGGAC | 2 cut(s) | 1104, 1767 |
| BsmI | GAATGC | 3 cut(s) | 609, 2174, 2712 |
| BsnI | GGCC | 4 cut(s) | 294, 792, 1734, 2241 |
| Bso31I | GGTCTC | 2 cut(s) | 1569, 1925 |
| BsoBI | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| Bsp1286I | GDGCHC | 4 cut(s) | 147, 261, 2184, 3141 |
| Bsp19I | CCATGG | 1 cut(s) | 673 |
| BspACI | CCGC | 8 cut(s) | 72, 340, 607, 682, 889, 1005, 1909, 2560 |
| BspANI | GGCC | 4 cut(s) | 294, 792, 1734, 2241 |
| BspCNI | CTCAG | 5 cut(s) | 457, 1183, 2079, 2226, 2595 |
| BspFNI | CGCG | 3 cut(s) | 70, 72, 2700 |
| BspHI | TCATGA | 5 cut(s) | 613, 1519, 1567, 1825, 3022 |
| BspLI | GGNNCC | 3 cut(s) | 327, 344, 671 |
| BspMI | ACCTGC | 3 cut(s) | 758, 1937, 3082 |
| BspPI | GGATC | 7 cut(s) | 320, 333, 664, 677, 1383, 1532, 2503 |
| BspT107I | GGYRCC | 1 cut(s) | 342 |
| BspTI | CTTAAG | 1 cut(s) | 1786 |
| BspTNI | GGTCTC | 2 cut(s) | 1569, 1925 |
| BsrI | ACTGG | 8 cut(s) | 84, 762, 977, 1317, 1780, 3530, 3546, 3559 |
| BssECI | CCNNGG | 5 cut(s) | 673, 983, 1618, 2014, 2917 |
| BssNAI | GTATAC | 1 cut(s) | 564 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 1190 |
| BssT1I | CCWWGG | 4 cut(s) | 673, 1618, 2014, 2917 |
| Bst1107I | GTATAC | 1 cut(s) | 564 |
| Bst2BI | CACGAG | 1 cut(s) | 1190 |
| Bst2UI | CCWGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| Bst4CI | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| Bst6I | CTCTTC | 3 cut(s) | 19, 3220, 3573 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 1786 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1489, 3448, 3567 |
| BstC8I | GCNNGC | 8 cut(s) | 488, 680, 961, 1351, 1406, 2564, 3255, 3572 |
| BstDSI | CCRYGG | 1 cut(s) | 673 |
| BstEII | GGTNACC | 1 cut(s) | 2665 |
| BstFNI | CGCG | 3 cut(s) | 70, 72, 2700 |
| BstH2I | RGCGCY | 1 cut(s) | 1227 |
| BstHHI | GCGC | 2 cut(s) | 72, 1226 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 452, 684, 1489, 2728, 3448, 3558, 3567 |
| BstNI | CCWGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| BstNSI | RCATGY | 3 cut(s) | 494, 682, 1743 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 467 |
| BstPI | GGTNACC | 1 cut(s) | 2665 |
| BstSCI | CCNGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| BstSFI | CTRYAG | 1 cut(s) | 1533 |
| BstUI | CGCG | 3 cut(s) | 70, 72, 2700 |
| BstV1I | GCAGC | 4 cut(s) | 169, 442, 859, 2111 |
| BstV2I | GAAGAC | 4 cut(s) | 304, 1578, 1691, 2957 |
| BstX2I | RGATCY | 7 cut(s) | 325, 669, 1445, 1537, 1790, 1972, 2495 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3397 |
| BstYI | RGATCY | 7 cut(s) | 325, 669, 1445, 1537, 1790, 1972, 2495 |
| BstZ17I | GTATAC | 1 cut(s) | 564 |
| BsuRI | GGCC | 4 cut(s) | 294, 792, 1734, 2241 |
| BtgI | CCRYGG | 1 cut(s) | 673 |
| BtsI | GCAGTG | 1 cut(s) | 3490 |
| BtsIMutI | CAGTG | 5 cut(s) | 769, 2828, 3490, 3552, 3553 |
| BveI | ACCTGC | 3 cut(s) | 758, 1937, 3082 |
| Cac8I | GCNNGC | 8 cut(s) | 488, 680, 961, 1351, 1406, 2564, 3255, 3572 |
| CaiI | CAGNNNCTG | 1 cut(s) | 872 |
| CciI | TCATGA | 5 cut(s) | 613, 1519, 1567, 1825, 3022 |
| CfoI | GCGC | 2 cut(s) | 72, 1226 |
| Cfr13I | GGNCC | 3 cut(s) | 292, 980, 1720 |
| Csp6I | GTAC | 3 cut(s) | 2823, 3128, 3339 |
| CviQI | GTAC | 3 cut(s) | 2823, 3128, 3339 |
| DraI | TTTAAA | 2 cut(s) | 1810, 2502 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1779 |
| Eam1104I | CTCTTC | 3 cut(s) | 19, 3220, 3573 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1779 |
| EarI | CTCTTC | 3 cut(s) | 19, 3220, 3573 |
| EciI | GGCGGA | 1 cut(s) | 1898 |
| Ecl136II | GAGCTC | 2 cut(s) | 145, 259 |
| Eco130I | CCWWGG | 4 cut(s) | 673, 1618, 2014, 2917 |
| Eco147I | AGGCCT | 1 cut(s) | 1734 |
| Eco24I | GRGCYC | 2 cut(s) | 147, 261 |
| Eco31I | GGTCTC | 2 cut(s) | 1569, 1925 |
| Eco47I | GGWCC | 2 cut(s) | 980, 1720 |
| Eco47III | AGCGCT | 1 cut(s) | 1225 |
| Eco53kI | GAGCTC | 2 cut(s) | 145, 259 |
| Eco57I | CTGAAG | 3 cut(s) | 2691, 2969, 3233 |
| Eco88I | CYCGRG | 3 cut(s) | 146, 708, 2147 |
| Eco91I | GGTNACC | 1 cut(s) | 2665 |
| EcoICRI | GAGCTC | 2 cut(s) | 145, 259 |
| EcoO65I | GGTNACC | 1 cut(s) | 2665 |
| EcoRI | GAATTC | 3 cut(s) | 117, 2642, 3170 |
| EcoRII | CCWGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| EcoT14I | CCWWGG | 4 cut(s) | 673, 1618, 2014, 2917 |
| EcoT22I | ATGCAT | 3 cut(s) | 281, 1485, 2851 |
| EcoT38I | GRGCYC | 2 cut(s) | 147, 261 |
| ErhI | CCWWGG | 4 cut(s) | 673, 1618, 2014, 2917 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 798, 830 |
| FaqI | GGGAC | 2 cut(s) | 1104, 1767 |
| FauI | CCCGC | 2 cut(s) | 65, 675 |
| FbaI | TGATCA | 3 cut(s) | 721, 931, 2440 |
| FblI | GTMKAC | 2 cut(s) | 563, 2797 |
| Fnu4HI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 2125 |
| FriOI | GRGCYC | 2 cut(s) | 147, 261 |
| Fsp4HI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 2125 |
| FspBI | CTAG | 7 cut(s) | 104, 198, 794, 1394, 2121, 2801, 2867 |
| GlaI | GCGC | 2 cut(s) | 71, 1225 |
| GluI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 2125 |
| GsaI | CCCAGC | 3 cut(s) | 293, 1510, 3401 |
| GsuI | CTGGAG | 1 cut(s) | 1610 |
| HaeII | RGCGCY | 1 cut(s) | 1227 |
| HaeIII | GGCC | 4 cut(s) | 294, 792, 1734, 2241 |
| HapII | CCGG | 1 cut(s) | 3146 |
| HhaI | GCGC | 2 cut(s) | 72, 1226 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 2 cut(s) | 70, 1224 |
| HinP1I | GCGC | 2 cut(s) | 70, 1224 |
| HincII | GTYRAC | 4 cut(s) | 9, 580, 939, 1638 |
| HindII | GTYRAC | 4 cut(s) | 9, 580, 939, 1638 |
| HindIII | AAGCTT | 3 cut(s) | 1859, 2030, 2729 |
| HpaII | CCGG | 1 cut(s) | 3146 |
| HphI | GGTGA | 3 cut(s) | 115, 2633, 3290 |
| Hpy166II | GTNNAC | 9 cut(s) | 9, 101, 564, 580, 641, 939, 1638, 1720, 2798 |
| Hpy8I | GTNNAC | 9 cut(s) | 9, 101, 564, 580, 641, 939, 1638, 1720, 2798 |
| Hpy99I | CGWCG | 1 cut(s) | 24 |
| HpyCH4III | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| HpyCH4IV | ACGT | 3 cut(s) | 637, 1549, 2591 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 452, 684, 1489, 2728, 3448, 3558, 3567 |
| HpySE526I | ACGT | 3 cut(s) | 637, 1549, 2591 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 2 cut(s) | 70, 1224 |
| Ksp22I | TGATCA | 3 cut(s) | 721, 931, 2440 |
| LmnI | GCTCC | 2 cut(s) | 869, 2627 |
| Lsp1109I | GCAGC | 4 cut(s) | 169, 442, 859, 2111 |
| LweI | GCATC | 8 cut(s) | 1033, 1150, 2327, 2468, 2836, 2858, 2912, 3202 |
| MaeI | CTAG | 7 cut(s) | 104, 198, 794, 1394, 2121, 2801, 2867 |
| MaeII | ACGT | 3 cut(s) | 637, 1549, 2591 |
| MaeIII | GTNAC | 3 cut(s) | 1381, 2648, 2665 |
| MfeI | CAATTG | 4 cut(s) | 186, 2223, 2263, 2893 |
| MflI | RGATCY | 7 cut(s) | 325, 669, 1445, 1537, 1790, 1972, 2495 |
| MhlI | GDGCHC | 4 cut(s) | 147, 261, 2184, 3141 |
| MlyI | GAGTC | 5 cut(s) | 203, 1755, 2080, 3100, 3432 |
| MmeI | TCCRAC | 2 cut(s) | 1488, 2137 |
| Mph1103I | ATGCAT | 3 cut(s) | 281, 1485, 2851 |
| MroXI | GAANNNNTTC | 6 cut(s) | 813, 1083, 1515, 1609, 2954, 2991 |
| MslI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| MspCI | CTTAAG | 1 cut(s) | 1786 |
| MspI | CCGG | 1 cut(s) | 3146 |
| MspR9I | CCNGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| MunI | CAATTG | 4 cut(s) | 186, 2223, 2263, 2893 |
| Mva1269I | GAATGC | 3 cut(s) | 609, 2174, 2712 |
| MvaI | CCWGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| MvnI | CGCG | 3 cut(s) | 70, 72, 2700 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 452, 684, 1489, 2728, 3448, 3558, 3567 |
| NcoI | CCATGG | 1 cut(s) | 673 |
| NlaIV | GGNNCC | 3 cut(s) | 327, 344, 671 |
| NmeAIII | GCCGAG | 1 cut(s) | 2328 |
| NmuCI | GTSAC | 1 cut(s) | 1381 |
| NsiI | ATGCAT | 3 cut(s) | 281, 1485, 2851 |
| NspI | RCATGY | 3 cut(s) | 494, 682, 1743 |
| PaeI | GCATGC | 1 cut(s) | 682 |
| PaeR7I | CTCGAG | 2 cut(s) | 146, 708 |
| PagI | TCATGA | 5 cut(s) | 613, 1519, 1567, 1825, 3022 |
| PaqCI | CACCTGC | 1 cut(s) | 1937 |
| PceI | AGGCCT | 1 cut(s) | 1734 |
| PciI | ACATGT | 1 cut(s) | 1739 |
| PctI | GAATGC | 3 cut(s) | 609, 2174, 2712 |
| PdmI | GAANNNNTTC | 6 cut(s) | 813, 1083, 1515, 1609, 2954, 2991 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 647, 1624, 3148 |
| PfoI | TCCNGGA | 1 cut(s) | 3007 |
| PkrI | GCNGC | 5 cut(s) | 184, 342, 457, 874, 2126 |
| PleI | GAGTC | 5 cut(s) | 202, 1755, 2079, 3099, 3431 |
| PpsI | GAGTC | 5 cut(s) | 202, 1755, 2079, 3099, 3431 |
| PscI | ACATGT | 1 cut(s) | 1739 |
| PshAI | GACNNNNGTC | 1 cut(s) | 467 |
| PshBI | ATTAAT | 1 cut(s) | 2111 |
| Psp124BI | GAGCTC | 2 cut(s) | 147, 261 |
| Psp6I | CCWGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| PspEI | GGTNACC | 1 cut(s) | 2665 |
| PspFI | CCCAGC | 3 cut(s) | 289, 1506, 3397 |
| PspGI | CCWGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| PspN4I | GGNNCC | 3 cut(s) | 327, 344, 671 |
| PspPI | GGNCC | 3 cut(s) | 292, 980, 1720 |
| PspXI | VCTCGAGB | 1 cut(s) | 708 |
| PstNI | CAGNNNCTG | 1 cut(s) | 872 |
| PsuI | RGATCY | 7 cut(s) | 325, 669, 1445, 1537, 1790, 1972, 2495 |
| RsaI | GTAC | 3 cut(s) | 2824, 3129, 3340 |
| RsaNI | GTAC | 3 cut(s) | 2823, 3128, 3339 |
| RseI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| SacI | GAGCTC | 2 cut(s) | 147, 261 |
| SatI | GCNGC | 5 cut(s) | 183, 341, 456, 873, 2125 |
| Sau96I | GGNCC | 3 cut(s) | 292, 980, 1720 |
| SchI | GAGTC | 5 cut(s) | 203, 1755, 2080, 3100, 3432 |
| ScrFI | CCNGG | 4 cut(s) | 984, 1542, 3009, 3284 |
| SduI | GDGCHC | 4 cut(s) | 147, 261, 2184, 3141 |
| SfaNI | GCATC | 8 cut(s) | 1033, 1150, 2327, 2468, 2836, 2858, 2912, 3202 |
| SfcI | CTRYAG | 1 cut(s) | 1533 |
| Sfr274I | CTCGAG | 2 cut(s) | 146, 708 |
| SinI | GGWCC | 2 cut(s) | 980, 1720 |
| SlaI | CTCGAG | 2 cut(s) | 146, 708 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 128, 596 |
| SmlI | CTYRAG | 7 cut(s) | 146, 708, 1756, 1786, 1961, 2732, 3371 |
| SmoI | CTYRAG | 7 cut(s) | 146, 708, 1756, 1786, 1961, 2732, 3371 |
| SphI | GCATGC | 1 cut(s) | 682 |
| SseBI | AGGCCT | 1 cut(s) | 1734 |
| SsiI | CCGC | 8 cut(s) | 72, 340, 607, 682, 889, 1005, 1909, 2560 |
| SspI | AATATT | 2 cut(s) | 1335, 3019 |
| SspMI | CTAG | 7 cut(s) | 104, 198, 794, 1394, 2121, 2801, 2867 |
| SstI | GAGCTC | 2 cut(s) | 147, 261 |
| StuI | AGGCCT | 1 cut(s) | 1734 |
| StyD4I | CCNGG | 4 cut(s) | 982, 1540, 3007, 3282 |
| StyI | CCWWGG | 4 cut(s) | 673, 1618, 2014, 2917 |
| TaaI | ACNGT | 3 cut(s) | 1073, 1476, 1527 |
| TaiI | ACGT | 3 cut(s) | 640, 1552, 2594 |
| TaqI | TCGA | 4 cut(s) | 147, 709, 1884, 2716 |
| TaqII | GACCGA | 2 cut(s) | 153, 759 |
| TatI | WGTACW | 2 cut(s) | 2822, 3127 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TscAI | CASTG | 5 cut(s) | 769, 2835, 3490, 3553, 3559 |
| TseFI | GTSAC | 1 cut(s) | 1381 |
| TseI | GCWGC | 4 cut(s) | 182, 455, 872, 2124 |
| Tsp45I | GTSAC | 1 cut(s) | 1381 |
| TspGWI | ACGGA | 4 cut(s) | 238, 547, 1170, 3416 |
| TspRI | CASTG | 5 cut(s) | 769, 2835, 3490, 3553, 3559 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 647, 1624, 3148 |
| Vha464I | CTTAAG | 1 cut(s) | 1786 |
| VpaK11BI | GGWCC | 2 cut(s) | 980, 1720 |
| VspI | ATTAAT | 1 cut(s) | 2111 |
| XapI | RAATTY | 9 cut(s) | 117, 726, 1681, 1805, 1879, 2642, 2854, 3170, 3275 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 3 cut(s) | 494, 682, 1743 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 829, 2012 |
| XhoI | CTCGAG | 2 cut(s) | 146, 708 |
| XmiI | GTMKAC | 2 cut(s) | 563, 2797 |
| XmnI | GAANNNNTTC | 6 cut(s) | 813, 1083, 1515, 1609, 2954, 2991 |
| XspI | CTAG | 7 cut(s) | 104, 198, 794, 1394, 2121, 2801, 2867 |
| Zsp2I | ATGCAT | 3 cut(s) | 281, 1485, 2851 |