Rroxscaffold_7G00217160

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000105
Physical Location & Seq
Reverse (-)
67679509 .. 67688458
8950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00217160.1

Sequence Viewer

Length: 1803 bp
ATGACGTCGACTTGGTCTCCCCGTCGACGATGGAAATACGATGTTTTTCTAAGCTTCAGAGGGGAAGATACCCGCGAGACTTTCATCTGCCATCTGTATCGTGCACTAACTGCAAAAGGAATTATAACCTTTCTAGATGACGAAAGCCTGGAGAGAGGATCAACCATTGGCCCATCGCTTTTTACTGCAATTCAGGACTCAAGAATTGCCCTGGTCGTTCTTTCACAGAATTTCGCTTCTTCATCCTGGTGCTTGGATGAACTCTCCAAGATTCTTCAATGCAGGGAAGAGAGGGGACAAATAATCTACCCAATCTTCTACCAAGTGGATCCTTCTGATGTGCGCAAGCAAAGGGGAAGTTTTCAGCTCCGTACAGTGGAGGTAAGGGAACATGAAGAAGTTTATGGGAATAAGGATAAACTAAAGGAGTGGACAGATGCTTTGAGAGAGGTGAGCAGGATTGCTGGGTGGGATTCGAGTACATATGAGGATGACGGAAAAATGATTGAGCACATTGTTACGCGTACTCTAATTATAGGAACAGACAAAATCCAAGCCATGGTAATGGACTTGCCTGAGTTAGAAGTGGCTCATTGGAAACCAGAAGCCTTTTCAAATTTATCTGAACTCAGTCTTCTCCATATTCGTAATGTGGAGCTTCCTGAAGGCCTCACTTTTCTATCTAATTCCTTGAGACTCCTTGAATGGAGTGGGTACCCCTTAAGATCCCTCCCACAAAACTTTGAACCAGACGAACTTGTTGAACTTAACTTGTGCCACAGCAACATTGAGCACCTCCGGAGCAAAGATCTGAACATAAGTAACTGCAATCTTGGTGACCCTGCATTTGCCAACTTTGCCTGTTGTCCCTCCTTAGTTGCACTAAATCTGAGTGGAAATAATTTTGTTAAGCTTCCTCCAAGCATCAGATCCTGTTTTAAGCTTCAGAACATTAATTTGGAGAATTGCAAGAGACTTCAAGAGTTGTCGGGACTTCCATCAAATAGTAAATTGGATGTGAGGGCAGATGGTTGTTCTTCACTGGAAATGCTGTTTGATGTATCCAATTTCAATAGATTGGAGAAATCATATTTCAATTTCATCAATTGCTTCAAACTAAATGACAATCAGGCCTGCAGTAACATAGCATTTGAAATGCTGAGGATATTCCTTAATCGGCGAATTTCTAGTGTGACGGAGACTTTTCAAATTGTAATTCCTGGAAGTAGAATTCCTGAGTGGTTTGATCATCGAAGATTTGGGAGTTCATTAACTGTAGACCTACTTCCAGGTTGGAATAAGAGTAGGTTTTTGGGATTTGTTTTGTGTGCTGTTTTTGTACTCCATGAGCATTGTGAGGTTGATGAGCTTCATATCCGTCAGTTCAAGACTTTTAAGGCTACTCATCATCTTGTATGTTGCCTGAAGCTCAATGGAAGAGAATTACAAGTGTACGGCAAACAGCCTGCATTTCGCTTTAGTGAACAATTTTGCCAGGTTGAGTCAGATCACCTTTGGATATTCTATGTGTCCCGTGAGAAATACTTTGGTACAGATTGGTGGCATAACAGTTGCAGAAAGCTTAAGTTCTTATTTGAAACAAGAGGGCCAGGTCTGAGGGTGAAGGAGTGTGGGGTACGTCTGATATATGTTCGAGATGTGCTAGAATTGAACCAAACTGTAACTCAATCCAGCAGTGGGATGTCTCCCCCATATGAGGATATGTTAATTGATTTCGAGAATCGAGTTGAAGGGGAAACCAGTGGTACTGGTAGCAGAACCTGCACCCTTGAAGAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

600

Amino Acids

69.31

Weight (kDa)

5.91

Isoelectric Point (pI)

48.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 12 - 176 1.7e-51 TIR domain
TIR_2 PF13676 15 - 124 4.6e-15 TIR domain
C-JID PF20160 406 - 554 2.2e-16 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
AatII GACGTC 1 cut(s) 8
Acc16I TGCGCA 1 cut(s) 344
Acc36I ACCTGC 1 cut(s) 1790
Acc65I GGTACC 1 cut(s) 714
AccB1I GGYRCC 1 cut(s) 714
AccB7I CCANNNNNTGG 1 cut(s) 559
AccI GTMKAC 3 cut(s) 8, 25, 1278
AccII CGCG 2 cut(s) 75, 523
AccIII TCCGGA 1 cut(s) 798
AciI CCGC 1 cut(s) 73
AclWI GGATC 5 cut(s) 166, 323, 336, 720, 924
AcsI RAATTY 4 cut(s) 229, 616, 1182, 1230
AcuI CTGAAG 4 cut(s) 40, 684, 929, 1445
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 9 cut(s) 373, 481, 526, 716, 1341, 1454, 1552, 1638, 1768
AfiI CCNNNNNNNGG 4 cut(s) 376, 559, 1698, 1717
AflII CTTAAG 2 cut(s) 721, 1583
AflIII ACRYGT 1 cut(s) 521
AjnI CCWGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
AjuI GAANNNNNNNTTGG 2 cut(s) 941, 973
AluBI AGCT 8 cut(s) 54, 367, 658, 913, 943, 1369, 1429, 1582
AluI AGCT 8 cut(s) 54, 367, 658, 913, 943, 1369, 1429, 1582
Alw21I GWGCWC 3 cut(s) 106, 513, 795
Alw26I GTCTC 6 cut(s) 21, 71, 688, 967, 1193, 1710
Alw44I GTGCAC 1 cut(s) 102
AlwI GGATC 5 cut(s) 166, 323, 336, 720, 924
AlwNI CAGNNNCTG 2 cut(s) 933, 1782
Aor13HI TCCGGA 1 cut(s) 798
AoxI GGCC 4 cut(s) 169, 667, 1131, 1607
ApaLI GTGCAC 1 cut(s) 102
ApoI RAATTY 4 cut(s) 229, 616, 1182, 1230
ArsI GACNNNNNNTTYG 4 cut(s) 424, 456, 830, 862
AseI ATTAAT 1 cut(s) 954
Asp718I GGTACC 1 cut(s) 714
AspLEI GCGC 1 cut(s) 345
AspS9I GGNCC 2 cut(s) 170, 1607
AsuHPI GGTGA 4 cut(s) 463, 848, 1502, 1633
BaeGI GKGCMC 1 cut(s) 106
BamHI GGATCC 1 cut(s) 328
BanI GGYRCC 1 cut(s) 714
BarI GAAGNNNNNNTAC 2 cut(s) 1269, 1301
BbsI GAAGAC 1 cut(s) 626
Bbv12I GWGCWC 3 cut(s) 106, 513, 795
BbvCI CCTCAGC 1 cut(s) 1160
BccI CCATC 5 cut(s) 24, 99, 181, 1006, 1022
BceAI ACGGC 1 cut(s) 1471
BciT130I CCWGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
BciVI GTATCC 1 cut(s) 1072
BclI TGATCA 1 cut(s) 1246
BcoDI GTCTC 6 cut(s) 21, 71, 688, 967, 1193, 1710
BfaI CTAG 3 cut(s) 134, 1188, 1664
BfmI CTRYAG 3 cut(s) 1135, 1275, 1799
BfrI CTTAAG 2 cut(s) 721, 1583
BfuAI ACCTGC 1 cut(s) 1790
BfuI GTATCC 1 cut(s) 1072
BglII AGATCT 1 cut(s) 808
Bme1390I CCNGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
BmgT120I GGNCC 2 cut(s) 170, 1607
BmiI GGNNCC 2 cut(s) 330, 716
BmrFI CCNGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
BmsI GCATC 2 cut(s) 427, 933
BpiI GAAGAC 1 cut(s) 626
BpmI CTGGAG 1 cut(s) 170
Bpu10I CCTNAGC 1 cut(s) 1160
BpuEI CTTGAG 2 cut(s) 184, 712
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 21
BsaJI CCNNGG 2 cut(s) 210, 558
BsaWI WCCGGW 1 cut(s) 798
BsaXI ACNNNNNCTCC 1 cut(s) 31
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 559, 1698, 1717
Bse1I ACTGG 3 cut(s) 1047, 1761, 1774
BseAI TCCGGA 1 cut(s) 798
BseBI CCWGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
BseDI CCNNGG 2 cut(s) 210, 558
BseGI GGATG 5 cut(s) 242, 262, 496, 1021, 1707
BseLI CCNNNNNNNGG 4 cut(s) 376, 559, 1698, 1717
BseMII CTCAG 6 cut(s) 567, 643, 881, 1151, 1227, 1607
BseNI ACTGG 3 cut(s) 1047, 1761, 1774
BseSI GKGCMC 1 cut(s) 106
BseYI CCCAGC 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 1768
Bsh1236I CGCG 2 cut(s) 75, 523
BshFI GGCC 4 cut(s) 171, 669, 1133, 1609
BshNI GGYRCC 1 cut(s) 714
BsiHKAI GWGCWC 3 cut(s) 106, 513, 795
BsiSI CCGG 1 cut(s) 799
BslFI GGGAC 4 cut(s) 309, 852, 1005, 1516
BslI CCNNNNNNNGG 4 cut(s) 376, 559, 1698, 1717
BsmAI GTCTC 6 cut(s) 21, 71, 688, 967, 1193, 1710
BsmFI GGGAC 4 cut(s) 309, 852, 1005, 1516
BsnI GGCC 4 cut(s) 171, 669, 1133, 1609
Bso31I GGTCTC 1 cut(s) 21
Bsp1286I GDGCHC 3 cut(s) 106, 513, 795
Bsp13I TCCGGA 1 cut(s) 798
Bsp143I GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
Bsp19I CCATGG 1 cut(s) 558
BspACI CCGC 1 cut(s) 73
BspANI GGCC 4 cut(s) 171, 669, 1133, 1609
BspCNI CTCAG 6 cut(s) 568, 642, 882, 1152, 1228, 1608
BspEI TCCGGA 1 cut(s) 798
BspFNI CGCG 2 cut(s) 75, 523
BspLI GGNNCC 2 cut(s) 330, 716
BspMAI CTGCAG 1 cut(s) 1139
BspMI ACCTGC 1 cut(s) 1790
BspPI GGATC 5 cut(s) 166, 323, 336, 720, 924
BspT107I GGYRCC 1 cut(s) 714
BspTI CTTAAG 2 cut(s) 721, 1583
BspTNI GGTCTC 1 cut(s) 21
BsrI ACTGG 3 cut(s) 1047, 1761, 1774
BssECI CCNNGG 2 cut(s) 210, 558
BssMI GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 558
Bst2UI CCWGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
Bst4CI ACNGT 4 cut(s) 376, 1276, 1571, 1681
Bst6I CTCTTC 2 cut(s) 282, 1432
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 721, 1583
BstAPI GCANNNNNTGC 2 cut(s) 110, 1782
BstC8I GCNNGC 3 cut(s) 347, 1135, 1467
BstDEI CTNAG 8 cut(s) 50, 576, 629, 874, 890, 1160, 1236, 1616
BstDSI CCRYGG 1 cut(s) 558
BstEII GGTNACC 1 cut(s) 836
BstF5I GGATG 5 cut(s) 242, 262, 496, 1021, 1707
BstFNI CGCG 2 cut(s) 75, 523
BstHHI GCGC 1 cut(s) 345
BstKTI GATC 7 cut(s) 161, 331, 728, 811, 932, 1249, 1510
BstMAI GTCTC 6 cut(s) 21, 71, 688, 967, 1193, 1710
BstMBI GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
BstMWI GCNNNNNNNGC 3 cut(s) 110, 857, 1782
BstNI CCWGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
BstPI GGTNACC 1 cut(s) 836
BstSCI CCNGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
BstSFI CTRYAG 3 cut(s) 1135, 1275, 1799
BstSLI GKGCMC 1 cut(s) 106
BstUI CGCG 2 cut(s) 75, 523
BstV2I GAAGAC 1 cut(s) 626
BstX2I RGATCY 4 cut(s) 328, 725, 808, 929
BstXI CCANNNNNNTGG 1 cut(s) 565
BstYI RGATCY 4 cut(s) 328, 725, 808, 929
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 4 cut(s) 171, 669, 1133, 1609
BtgI CCRYGG 1 cut(s) 558
BtgZI GCGATG 1 cut(s) 159
BtsCI GGATG 5 cut(s) 242, 262, 496, 1021, 1707
BtsI GCAGTG 1 cut(s) 1702
BtsIMutI CAGTG 4 cut(s) 381, 1040, 1702, 1768
BveI ACCTGC 1 cut(s) 1790
Cac8I GCNNGC 3 cut(s) 347, 1135, 1467
CaiI CAGNNNCTG 2 cut(s) 933, 1782
CfoI GCGC 1 cut(s) 345
Cfr13I GGNCC 2 cut(s) 170, 1607
Csp6I GTAC 9 cut(s) 372, 480, 525, 715, 1340, 1453, 1551, 1637, 1767
CviAII CATG 3 cut(s) 392, 559, 1346
CviQI GTAC 9 cut(s) 372, 480, 525, 715, 1340, 1453, 1551, 1637, 1767
DdeI CTNAG 8 cut(s) 50, 576, 629, 874, 890, 1160, 1236, 1616
DpnI GATC 7 cut(s) 160, 330, 727, 810, 931, 1248, 1509
DpnII GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
Eam1104I CTCTTC 2 cut(s) 282, 1432
EarI CTCTTC 2 cut(s) 282, 1432
Eco130I CCWWGG 1 cut(s) 558
Eco147I AGGCCT 2 cut(s) 669, 1133
Eco31I GGTCTC 1 cut(s) 21
Eco57I CTGAAG 4 cut(s) 40, 684, 929, 1445
Eco91I GGTNACC 1 cut(s) 836
EcoO65I GGTNACC 1 cut(s) 836
EcoRI GAATTC 1 cut(s) 1230
EcoRII CCWGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
EcoT14I CCWWGG 1 cut(s) 558
ErhI CCWWGG 1 cut(s) 558
FaeI CATG 3 cut(s) 395, 562, 1349
FaqI GGGAC 4 cut(s) 309, 852, 1005, 1516
FatI CATG 3 cut(s) 391, 558, 1345
FauI CCCGC 1 cut(s) 80
FauNDI CATATG 2 cut(s) 484, 1714
FbaI TGATCA 1 cut(s) 1246
FblI GTMKAC 3 cut(s) 8, 25, 1278
FokI GGATG 5 cut(s) 229, 269, 503, 1028, 1714
FspBI CTAG 3 cut(s) 134, 1188, 1664
FspI TGCGCA 1 cut(s) 344
GlaI GCGC 1 cut(s) 344
GsaI CCCAGC 1 cut(s) 468
GsuI CTGGAG 1 cut(s) 170
HaeIII GGCC 4 cut(s) 171, 669, 1133, 1609
HapII CCGG 1 cut(s) 799
HhaI GCGC 1 cut(s) 345
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 395, 562, 1349
Hin6I GCGC 1 cut(s) 343
HinP1I GCGC 1 cut(s) 343
HincII GTYRAC 2 cut(s) 9, 26
HindII GTYRAC 2 cut(s) 9, 26
HindIII AAGCTT 4 cut(s) 52, 911, 941, 1580
HinfI GANTC 6 cut(s) 197, 271, 473, 696, 1502, 1741
HpaII CCGG 1 cut(s) 799
HphI GGTGA 4 cut(s) 463, 848, 1502, 1633
Hpy166II GTNNAC 7 cut(s) 9, 26, 104, 432, 1279, 1453, 1484
Hpy8I GTNNAC 7 cut(s) 9, 26, 104, 432, 1279, 1453, 1484
Hpy99I CGWCG 3 cut(s) 10, 27, 30
HpyAV CCTTC 4 cut(s) 342, 659, 1618, 1745
HpyCH4III ACNGT 4 cut(s) 376, 1276, 1571, 1681
HpyCH4IV ACGT 2 cut(s) 5, 1639
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 857, 1782
HpyF3I CTNAG 8 cut(s) 50, 576, 629, 874, 890, 1160, 1236, 1616
HpySE526I ACGT 2 cut(s) 5, 1639
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 395, 562, 1349
HspAI GCGC 1 cut(s) 343
Kpn2I TCCGGA 1 cut(s) 798
KpnI GGTACC 1 cut(s) 718
Ksp22I TGATCA 1 cut(s) 1246
Kzo9I GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
LmnI GCTCC 3 cut(s) 372, 655, 801
LweI GCATC 2 cut(s) 427, 933
MaeI CTAG 3 cut(s) 134, 1188, 1664
MaeII ACGT 2 cut(s) 5, 1639
MaeIII GTNAC 6 cut(s) 517, 821, 836, 1139, 1192, 1681
MalI GATC 7 cut(s) 160, 330, 727, 810, 931, 1248, 1509
MboI GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
MfeI CAATTG 1 cut(s) 1105
MflI RGATCY 4 cut(s) 328, 725, 808, 929
MhlI GDGCHC 3 cut(s) 106, 513, 795
MluI ACGCGT 1 cut(s) 521
MlyI GAGTC 3 cut(s) 191, 690, 1511
MmeI TCCRAC 1 cut(s) 1274
MroI TCCGGA 1 cut(s) 798
MslI CAYNNNNRTG 2 cut(s) 247, 563
MspCI CTTAAG 2 cut(s) 721, 1583
MspI CCGG 1 cut(s) 799
MspR9I CCNGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
MunI CAATTG 1 cut(s) 1105
MvaI CCWGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
MvnI CGCG 2 cut(s) 75, 523
MwoI GCNNNNNNNGC 3 cut(s) 110, 857, 1782
NcoI CCATGG 1 cut(s) 558
NdeI CATATG 2 cut(s) 484, 1714
NdeII GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
NlaIII CATG 3 cut(s) 395, 562, 1349
NlaIV GGNNCC 2 cut(s) 330, 716
NmuCI GTSAC 2 cut(s) 836, 1192
NsbI TGCGCA 1 cut(s) 344
PceI AGGCCT 2 cut(s) 669, 1133
PfeI GAWTC 3 cut(s) 271, 473, 1741
PflFI GACNNNGTC 1 cut(s) 13
PflMI CCANNNNNTGG 1 cut(s) 559
PfoI TCCNGGA 1 cut(s) 1219
PleI GAGTC 3 cut(s) 191, 690, 1510
PpsI GAGTC 3 cut(s) 191, 690, 1510
PshBI ATTAAT 1 cut(s) 954
PsiI TTATAA 1 cut(s) 125
Psp6I CCWGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
PspEI GGTNACC 1 cut(s) 836
PspFI CCCAGC 1 cut(s) 464
PspGI CCWGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
PspN4I GGNNCC 2 cut(s) 330, 716
PspPI GGNCC 2 cut(s) 170, 1607
PstI CTGCAG 1 cut(s) 1139
PstNI CAGNNNCTG 2 cut(s) 933, 1782
PsuI RGATCY 4 cut(s) 328, 725, 808, 929
PsyI GACNNNGTC 1 cut(s) 13
RsaI GTAC 9 cut(s) 373, 481, 526, 716, 1341, 1454, 1552, 1638, 1768
RsaNI GTAC 9 cut(s) 372, 480, 525, 715, 1340, 1453, 1551, 1637, 1767
RseI CAYNNNNRTG 2 cut(s) 247, 563
SalI GTCGAC 2 cut(s) 7, 24
Sau3AI GATC 7 cut(s) 158, 328, 725, 808, 929, 1246, 1507
Sau96I GGNCC 2 cut(s) 170, 1607
SchI GAGTC 3 cut(s) 191, 690, 1511
ScrFI CCNGG 7 cut(s) 149, 212, 247, 1221, 1290, 1496, 1611
SduI GDGCHC 3 cut(s) 106, 513, 795
SfaNI GCATC 2 cut(s) 427, 933
SfcI CTRYAG 3 cut(s) 1135, 1275, 1799
SgrDI CGTCGACG 1 cut(s) 24
SmiMI CAYNNNNRTG 2 cut(s) 247, 563
SmlI CTYRAG 4 cut(s) 199, 691, 721, 1583
SmoI CTYRAG 4 cut(s) 199, 691, 721, 1583
SseBI AGGCCT 2 cut(s) 669, 1133
SsiI CCGC 1 cut(s) 73
SspMI CTAG 3 cut(s) 134, 1188, 1664
StuI AGGCCT 2 cut(s) 669, 1133
StyD4I CCNGG 7 cut(s) 147, 210, 245, 1219, 1288, 1494, 1609
StyI CCWWGG 1 cut(s) 558
TaaI ACNGT 4 cut(s) 376, 1276, 1571, 1681
TaiI ACGT 2 cut(s) 8, 1642
TaqI TCGA 7 cut(s) 8, 25, 476, 1252, 1654, 1737, 1744
TatI WGTACW 2 cut(s) 479, 1339
TfiI GAWTC 3 cut(s) 271, 473, 1741
TscAI CASTG 4 cut(s) 381, 1047, 1702, 1768
TseFI GTSAC 2 cut(s) 836, 1192
Tsp45I GTSAC 2 cut(s) 836, 1192
TspDTI ATGAA 7 cut(s) 73, 231, 273, 408, 1090, 1257, 1361
TspGWI ACGGA 4 cut(s) 359, 510, 1211, 1367
TspRI CASTG 4 cut(s) 381, 1047, 1702, 1768
Tth111I GACNNNGTC 1 cut(s) 13
Van91I CCANNNNNTGG 1 cut(s) 559
Vha464I CTTAAG 2 cut(s) 721, 1583
VneI GTGCAC 1 cut(s) 102
VspI ATTAAT 1 cut(s) 954
XapI RAATTY 4 cut(s) 229, 616, 1182, 1230
XbaI TCTAGA 1 cut(s) 133
XmiI GTMKAC 3 cut(s) 8, 25, 1278
XspI CTAG 3 cut(s) 134, 1188, 1664
ZraI GACGTC 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.