Rmu_sc0002132.1_g000047

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002132.1
OG0000105
Physical Location & Seq
Forward (+)
189253 .. 193197
3945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002132.1_g000047.1.cds

Sequence Viewer

Length: 3192 bp
atgcgcatctctgccaaatcaaagcttaaatcgttcccattgcgaatacgttttcattgcatcaaagaaattccgtcatctcggccacttcccggtagaagggcggagaaggtgaaagcagcggtagccaccagacttggaagattgccgccgaagccggaggttaatggttcgacaacggtttctaactcacaattttatctaaattttctcagaaatccaacaaagataattgaggaaattgttaatcatatactgaagaagtccgtgtatacatcttcaagtgttgacaagggcttcataggaatgaattcccgcactgatgatttattaagaaattacatatgtccacagcttcttggggtgcgttttatagggatccatggcatgcggggcataggcaagacaacacttgctcgagctatccatgatgaaatttgtcaggattttgaccaaacctgctttctttccaatgttagagaaatgtctaaaaacaatggcctagtttctctacaagaaaaacttctttccagaatcctgatggcaaaatttgaaaatatagaggatgaatacgcaggagctgctatgatagaaaggcggttgtgtagaaaaaagatacttgttgttattgatgatgtggatcagttgaagcaattagagaaattggccggaagtcgcaactggtttggtctagggagtagaattatcataaccaccacagattttcagttgttaaaggcacatgatgttgatgctacgtacaaggttaacgggttaaactgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatgtcccccaccagaacattttttgcatctgtgctaccatattttagggtatgctcaggggcttccgttggctctcgtggttttaggttcttttctgagtggtagaagcgctgatgaatgggcaagtgcaatagataggctaaagaacacaccacataaacatattgttgaggtgcttcggattagttttgatggactggatgtaaaagacaaagaaatattcctgcatatcgcttgcttttacaagggaaaggataaggatcgtgtgacacaaatactagactattgcctgctaaaccctgtcattggtttaagtgttcttgctgatagatctctcataactatctccgacgacaaagaactgtggatgcatgatttgctacaagaaacgggctgggaaattgttcgtgaacagtctcctacagatccaggcaaacgtagtagattatggtctcatgaagacgtcaactatgtgctgaagagaaataagggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagaagccttttcaaatttgtctcatcttggtcttctccatattcgtaatgtggaccttcccaaaggcctcacttgtctttctaattccttgagactcctcgaatggactggttatcccttaagatctctcccaaaagtttttgaagcagatgaactcattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaatcttgagactttagatcttgaaggatgttctcatttggtaagaatccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaaatctcaagagtctgccaagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgttggtgctatgtcttgatgagactgccgttgaggaactgcctgtttcaattgaacggctgactggccttgtgacactgaatctaagcaactgcagaaatcttgtttgtcttccaaggaccatcaataaattgaagtctgttgaaaatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtgggggagatggacggttttgaggaaatgtcatctactgatgatcgcataaaatatgtgagaggttcaatctttcatggacgcaaagtagtttggcgatatttaaataagttcttgccttctggtttggtgcaaaaagggaatacagagccaacgagtttccgcttgcctatttttggtctgtgtaatttaacatatctgaacctgagtaattgcaatcttggtgaaggagcatttgccaatgaatttggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgcgttccttcaggcattcgattgctttctaagcttgagtactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtagactagatttaagggcggatggttgtacttcactgaaatacttgtttgatgcatcaaatttgaacagattagacaaatcatatttcaatttcatcaattgcttcaatctaaatggcaatgaaggatgcaacaacatagcatttgaaatgctgaagacattcatgcatcagggaatctctaataagagggaaacttttcaaattgtaattcctggaagtaatattcatgagtggttcagccatcagagtgttgggtgttcattaagtgtagctctacctgcacattggaataagagtcagtttttgggatttgctttgtgtgttgtttttatactccatgagcaccatccagtggatgagctttatataaatgaattcaagacttttaatgcgacgcatcatcttgtatgttgcctgaagctcgatggaagagaattggaagtgtatggcagacagcctgcatttcgctttagtgaggaattttgccaggttgaatcagatcacctgtggctattctatgtatcctgtgataaatactttggtacagagtggtggcatagtagttgcagtcagcttgagttcttatttgaaaccagagggctgggtctgaaggtgaaggagtgtggagttcgtctgatatacgagcaagatgtgcaagagttgaaccaaacaaccactcaatcaagcagttggatgtctccatatgaggatatattgattggttttgacattccggttgcaggggaaaccggcggcactggtagcagaacttgcacgcttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

1063

Amino Acids

120.78

Weight (kDa)

8.13

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1290
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 2 cut(s) 467, 2686
AccB7I CCANNNNNTGG 2 cut(s) 1336, 2752
AccI GTMKAC 2 cut(s) 272, 2401
AccII CGCG 1 cut(s) 2304
AciI CCGC 9 cut(s) 104, 122, 149, 316, 391, 598, 2164, 2417, 3153
AclI AACGTT 1 cut(s) 1804
AclWI GGATC 5 cut(s) 373, 386, 648, 1092, 1244
AcoI YGGCCR 2 cut(s) 83, 666
AcuI CTGAAG 6 cut(s) 278, 1322, 2295, 2573, 2837, 3029
AcyI GRCGYC 1 cut(s) 1287
AfaI GTAC 4 cut(s) 761, 2342, 2428, 2944
AfeI AGCGCT 1 cut(s) 934
AfiI CCNNNNNNNGG 7 cut(s) 92, 99, 1130, 1336, 2177, 2752, 3140
AflII CTTAAG 1 cut(s) 1498
AjnI CCWGG 3 cut(s) 1252, 2611, 2886
AjuI GAANNNNNNNTTGG 2 cut(s) 447, 479
Alw21I GWGCWC 1 cut(s) 2745
Alw26I GTCTC 8 cut(s) 1245, 1281, 1404, 1465, 1592, 1823, 2359, 3102
AlwI GGATC 5 cut(s) 373, 386, 648, 1092, 1244
AlwNI CAGNNNCTG 1 cut(s) 581
Ama87I CYCGRG 2 cut(s) 417, 1781
Aor51HI AGCGCT 1 cut(s) 934
AoxI GGCC 5 cut(s) 83, 499, 666, 1444, 1873
ApeKI GCWGC 2 cut(s) 119, 581
AseI ATTAAT 1 cut(s) 1745
Asp700I GAANNNNTTC 7 cut(s) 310, 522, 792, 1227, 1321, 2558, 2595
AspLEI GCGC 2 cut(s) 6, 935
AspS9I GGNCC 2 cut(s) 1432, 1926
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 5 cut(s) 124, 2237, 2281, 2894, 3025
AvaI CYCGRG 2 cut(s) 417, 1781
AvaII GGWCC 2 cut(s) 1432, 1926
BamHI GGATCC 1 cut(s) 378
BauI CACGAG 1 cut(s) 899
BbsI GAAGAC 4 cut(s) 1290, 1403, 1910, 2561
Bbv12I GWGCWC 1 cut(s) 2745
BbvI GCAGC 2 cut(s) 131, 568
BceAI ACGGC 2 cut(s) 1820, 1880
BciT130I CCWGG 3 cut(s) 1254, 2613, 2888
BciVI GTATCC 1 cut(s) 2932
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 8 cut(s) 1245, 1281, 1404, 1465, 1592, 1823, 2359, 3102
BfaI CTAG 4 cut(s) 503, 692, 1103, 2405
BfmI CTRYAG 2 cut(s) 1245, 1900
BfoI RGCGCY 1 cut(s) 936
BfrI CTTAAG 1 cut(s) 1498
BfuAI ACCTGC 2 cut(s) 467, 2686
BfuI GTATCC 1 cut(s) 2932
BglII AGATCT 3 cut(s) 1154, 1502, 1606
BisI GCNGC 4 cut(s) 120, 149, 582, 3154
BlsI GCNGC 4 cut(s) 121, 150, 583, 3155
BmcAI AGTACT 1 cut(s) 2342
Bme1390I CCNGG 4 cut(s) 93, 1254, 2613, 2888
Bme18I GGWCC 2 cut(s) 1432, 1926
BmeT110I CYCGRG 2 cut(s) 417, 1781
BmgT120I GGNCC 2 cut(s) 1432, 1926
BmiI GGNNCC 1 cut(s) 380
BmrFI CCNGG 4 cut(s) 93, 1254, 2613, 2888
BpiI GAAGAC 4 cut(s) 1290, 1403, 1910, 2561
Bpu10I CCTNAGC 1 cut(s) 879
BpuEI CTTGAG 5 cut(s) 1489, 1616, 1685, 2357, 2996
BpuMI CCSGG 1 cut(s) 93
BsaAI YACGTR 1 cut(s) 759
BsaBI GATNNNNATC 2 cut(s) 639, 1083
BsaHI GRCGYC 1 cut(s) 1287
BsaI GGTCTC 1 cut(s) 1281
BsaJI CCNNGG 4 cut(s) 382, 1330, 1648, 1922
BsaWI WCCGGW 1 cut(s) 3133
Bsc4I CCNNNNNNNGG 7 cut(s) 92, 99, 1130, 1336, 2177, 2752, 3140
Bse118I RCCGGY 1 cut(s) 3149
Bse1I ACTGG 6 cut(s) 686, 1026, 1492, 1876, 2750, 3163
Bse3DI GCAATG 3 cut(s) 38, 55, 2524
Bse8I GATNNNNATC 2 cut(s) 639, 1083
BseBI CCWGG 3 cut(s) 1254, 2613, 2888
BseDI CCNNGG 4 cut(s) 382, 1330, 1648, 1922
BseJI GATNNNNATC 2 cut(s) 639, 1083
BseLI CCNNNNNNNGG 7 cut(s) 92, 99, 1130, 1336, 2177, 2752, 3140
BseMI GCAATG 3 cut(s) 38, 55, 2524
BseMII CTCAG 4 cut(s) 226, 893, 911, 2198
BseNI ACTGG 6 cut(s) 686, 1026, 1492, 1876, 2750, 3163
BseRI GAGGAG 1 cut(s) 1466
BseXI GCAGC 2 cut(s) 131, 568
BseYI CCCAGC 2 cut(s) 1218, 3001
BsgI GTGCAG 1 cut(s) 2664
Bsh1236I CGCG 1 cut(s) 2304
BshFI GGCC 5 cut(s) 85, 501, 668, 1446, 1875
BsiHKAI GWGCWC 1 cut(s) 2745
BsiHKCI CYCGRG 2 cut(s) 417, 1781
BsiSI CCGG 5 cut(s) 93, 158, 669, 3134, 3150
BslFI GGGAC 1 cut(s) 813
BslI CCNNNNNNNGG 7 cut(s) 92, 99, 1130, 1336, 2177, 2752, 3140
BsmAI GTCTC 8 cut(s) 1245, 1281, 1404, 1465, 1592, 1823, 2359, 3102
BsmFI GGGAC 1 cut(s) 813
BsmI GAATGC 1 cut(s) 2316
BsnI GGCC 5 cut(s) 85, 501, 668, 1446, 1875
Bso31I GGTCTC 1 cut(s) 1281
BsoBI CYCGRG 2 cut(s) 417, 1781
Bsp1286I GDGCHC 1 cut(s) 2745
Bsp143I GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
Bsp19I CCATGG 1 cut(s) 382
BspACI CCGC 9 cut(s) 104, 122, 149, 316, 391, 598, 2164, 2417, 3153
BspANI GGCC 5 cut(s) 85, 501, 668, 1446, 1875
BspCNI CTCAG 4 cut(s) 225, 892, 912, 2199
BspFNI CGCG 1 cut(s) 2304
BspHI TCATGA 2 cut(s) 1279, 2626
BspLI GGNNCC 1 cut(s) 380
BspMAI CTGCAG 1 cut(s) 1904
BspMI ACCTGC 2 cut(s) 467, 2686
BspPI GGATC 5 cut(s) 373, 386, 648, 1092, 1244
BspTI CTTAAG 1 cut(s) 1498
BspTNI GGTCTC 1 cut(s) 1281
BsrDI GCAATG 3 cut(s) 38, 55, 2524
BsrFI RCCGGY 1 cut(s) 3149
BsrI ACTGG 6 cut(s) 686, 1026, 1492, 1876, 2750, 3163
BssAI RCCGGY 1 cut(s) 3149
BssECI CCNNGG 4 cut(s) 382, 1330, 1648, 1922
BssMI GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
BssNAI GTATAC 1 cut(s) 273
BssNI GRCGYC 1 cut(s) 1287
BssSI CACGAG 1 cut(s) 899
BssT1I CCWWGG 4 cut(s) 382, 1330, 1648, 1922
Bst1107I GTATAC 1 cut(s) 273
Bst2BI CACGAG 1 cut(s) 899
Bst2UI CCWGG 3 cut(s) 1254, 2613, 2888
Bst4CI ACNGT 5 cut(s) 181, 782, 1188, 1239, 2018
Bst6I CTCTTC 2 cut(s) 1298, 2824
BstACI GRCGYC 1 cut(s) 1287
BstAFI CTTAAG 1 cut(s) 1498
BstAPI GCANNNNNTGC 4 cut(s) 581, 1201, 3052, 3171
BstBAI YACGTR 1 cut(s) 759
BstC8I GCNNGC 6 cut(s) 389, 1060, 1115, 2168, 2859, 3176
BstDEI CTNAG 7 cut(s) 212, 879, 920, 1892, 2207, 2282, 2331
BstDSI CCRYGG 1 cut(s) 382
BstEII GGTNACC 1 cut(s) 2269
BstFNI CGCG 1 cut(s) 2304
BstH2I RGCGCY 1 cut(s) 936
BstHHI GCGC 2 cut(s) 6, 935
BstKTI GATC 9 cut(s) 381, 643, 1087, 1157, 1252, 1505, 1609, 2047, 2902
BstMAI GTCTC 8 cut(s) 1245, 1281, 1404, 1465, 1592, 1823, 2359, 3102
BstMBI GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
BstNI CCWGG 3 cut(s) 1254, 2613, 2888
BstNSI RCATGY 1 cut(s) 391
BstPI GGTNACC 1 cut(s) 2269
BstSCI CCNGG 4 cut(s) 91, 1252, 2611, 2886
BstSFI CTRYAG 2 cut(s) 1245, 1900
BstSNI TACGTA 1 cut(s) 759
BstUI CGCG 1 cut(s) 2304
BstV1I GCAGC 2 cut(s) 131, 568
BstV2I GAAGAC 4 cut(s) 1290, 1403, 1910, 2561
BstX2I RGATCY 5 cut(s) 378, 1154, 1249, 1502, 1606
BstXI CCANNNNNNTGG 1 cut(s) 3001
BstYI RGATCY 5 cut(s) 378, 1154, 1249, 1502, 1606
BstZ17I GTATAC 1 cut(s) 273
BsuI GTATCC 1 cut(s) 2932
BsuRI GGCC 5 cut(s) 85, 501, 668, 1446, 1875
BtgI CCRYGG 1 cut(s) 382
BtsIMutI CAGTG 5 cut(s) 318, 1883, 2432, 2757, 3156
BveI ACCTGC 2 cut(s) 467, 2686
Cac8I GCNNGC 6 cut(s) 389, 1060, 1115, 2168, 2859, 3176
CaiI CAGNNNCTG 1 cut(s) 581
CciI TCATGA 2 cut(s) 1279, 2626
CfoI GCGC 2 cut(s) 6, 935
Cfr10I RCCGGY 1 cut(s) 3149
Cfr13I GGNCC 2 cut(s) 1432, 1926
CseI GACGC 2 cut(s) 2091, 2803
Csp6I GTAC 4 cut(s) 760, 2341, 2427, 2943
CspCI CAANNNNNGTGG 2 cut(s) 118, 153
CviQI GTAC 4 cut(s) 760, 2341, 2427, 2943
DdeI CTNAG 7 cut(s) 212, 879, 920, 1892, 2207, 2282, 2331
DpnI GATC 9 cut(s) 380, 642, 1086, 1156, 1251, 1504, 1608, 2046, 2901
DpnII GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
DraI TTTAAA 1 cut(s) 2106
EaeI YGGCCR 2 cut(s) 83, 666
Eam1104I CTCTTC 2 cut(s) 1298, 2824
EarI CTCTTC 2 cut(s) 1298, 2824
EciI GGCGGA 2 cut(s) 119, 2432
Eco105I TACGTA 1 cut(s) 759
Eco130I CCWWGG 4 cut(s) 382, 1330, 1648, 1922
Eco147I AGGCCT 1 cut(s) 1446
Eco31I GGTCTC 1 cut(s) 1281
Eco47I GGWCC 2 cut(s) 1432, 1926
Eco47III AGCGCT 1 cut(s) 934
Eco57I CTGAAG 6 cut(s) 278, 1322, 2295, 2573, 2837, 3029
Eco88I CYCGRG 2 cut(s) 417, 1781
Eco91I GGTNACC 1 cut(s) 2269
EcoO65I GGTNACC 1 cut(s) 2269
EcoRI GAATTC 2 cut(s) 310, 2774
EcoRII CCWGG 3 cut(s) 1252, 2611, 2886
EcoT14I CCWWGG 4 cut(s) 382, 1330, 1648, 1922
EcoT22I ATGCAT 3 cut(s) 1197, 2455, 2568
ErhI CCWWGG 4 cut(s) 382, 1330, 1648, 1922
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 1 cut(s) 813
FauI CCCGC 2 cut(s) 323, 384
FauNDI CATATG 2 cut(s) 344, 3103
FblI GTMKAC 2 cut(s) 272, 2401
Fnu4HI GCNGC 4 cut(s) 120, 149, 582, 3154
Fsp4HI GCNGC 4 cut(s) 120, 149, 582, 3154
FspAI RTGCGCAY 1 cut(s) 5
FspBI CTAG 4 cut(s) 503, 692, 1103, 2405
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 2 cut(s) 5, 934
GluI GCNGC 4 cut(s) 120, 149, 582, 3154
GsaI CCCAGC 2 cut(s) 1222, 3005
HaeII RGCGCY 1 cut(s) 936
HaeIII GGCC 5 cut(s) 85, 501, 668, 1446, 1875
HapII CCGG 5 cut(s) 93, 158, 669, 3134, 3150
HgaI GACGC 2 cut(s) 2091, 2803
HhaI GCGC 2 cut(s) 6, 935
Hin1I GRCGYC 1 cut(s) 1287
Hin6I GCGC 2 cut(s) 4, 933
HinP1I GCGC 2 cut(s) 4, 933
HincII GTYRAC 4 cut(s) 289, 769, 1291, 1350
HindII GTYRAC 4 cut(s) 289, 769, 1291, 1350
HindIII AAGCTT 3 cut(s) 23, 1664, 2333
HpaI GTTAAC 1 cut(s) 769
HpaII CCGG 5 cut(s) 93, 158, 669, 3134, 3150
HphI GGTGA 5 cut(s) 124, 2237, 2281, 2894, 3025
Hpy166II GTNNAC 9 cut(s) 273, 289, 350, 769, 1235, 1291, 1350, 1432, 2402
Hpy8I GTNNAC 9 cut(s) 273, 289, 350, 769, 1235, 1291, 1350, 1432, 2402
Hpy99I CGWCG 2 cut(s) 1178, 2797
HpyCH4III ACNGT 5 cut(s) 181, 782, 1188, 1239, 2018
HpyCH4IV ACGT 5 cut(s) 49, 758, 1261, 1287, 1804
HpyF3I CTNAG 7 cut(s) 212, 879, 920, 1892, 2207, 2282, 2331
HpySE526I ACGT 5 cut(s) 49, 758, 1261, 1287, 1804
Hsp92I GRCGYC 1 cut(s) 1287
HspAI GCGC 2 cut(s) 4, 933
KspAI GTTAAC 1 cut(s) 769
Kzo9I GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
LmnI GCTCC 2 cut(s) 578, 2231
Lsp1109I GCAGC 2 cut(s) 131, 568
MaeI CTAG 4 cut(s) 503, 692, 1103, 2405
MaeII ACGT 5 cut(s) 49, 758, 1261, 1287, 1804
MaeIII GTNAC 4 cut(s) 1090, 1879, 2252, 2269
MalI GATC 9 cut(s) 380, 642, 1086, 1156, 1251, 1504, 1608, 2046, 2901
MboI GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
MfeI CAATTG 2 cut(s) 1857, 2497
MflI RGATCY 5 cut(s) 378, 1154, 1249, 1502, 1606
MhlI GDGCHC 1 cut(s) 2745
MlyI GAGTC 3 cut(s) 1467, 1714, 2704
MmeI TCCRAC 4 cut(s) 245, 1197, 1771, 3071
Mph1103I ATGCAT 3 cut(s) 1197, 2455, 2568
MroXI GAANNNNTTC 7 cut(s) 310, 522, 792, 1227, 1321, 2558, 2595
MslI CAYNNNNRTG 3 cut(s) 305, 1340, 2646
MspA1I CMGCKG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 1498
MspI CCGG 5 cut(s) 93, 158, 669, 3134, 3150
MspR9I CCNGG 4 cut(s) 93, 1254, 2613, 2888
MunI CAATTG 2 cut(s) 1857, 2497
Mva1269I GAATGC 1 cut(s) 2316
MvaI CCWGG 3 cut(s) 1254, 2613, 2888
MvnI CGCG 1 cut(s) 2304
NciI CCSGG 1 cut(s) 93
NcoI CCATGG 1 cut(s) 382
NdeI CATATG 2 cut(s) 344, 3103
NdeII GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
NlaIV GGNNCC 1 cut(s) 380
NmeAIII GCCGAG 2 cut(s) 61, 1962
NmuCI GTSAC 3 cut(s) 1090, 1879, 2269
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 3 cut(s) 1197, 2455, 2568
NspI RCATGY 1 cut(s) 391
PaeI GCATGC 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 417
PagI TCATGA 2 cut(s) 1279, 2626
PceI AGGCCT 1 cut(s) 1446
PctI GAATGC 1 cut(s) 2316
PdmI GAANNNNTTC 7 cut(s) 310, 522, 792, 1227, 1321, 2558, 2595
PflMI CCANNNNNTGG 2 cut(s) 1336, 2752
PfoI TCCNGGA 1 cut(s) 2611
PkrI GCNGC 4 cut(s) 121, 150, 583, 3155
PleI GAGTC 3 cut(s) 1467, 1713, 2703
PpsI GAGTC 3 cut(s) 1467, 1713, 2703
Ppu21I YACGTR 1 cut(s) 759
PshBI ATTAAT 1 cut(s) 1745
Psp1406I AACGTT 1 cut(s) 1804
Psp6I CCWGG 3 cut(s) 1252, 2611, 2886
PspEI GGTNACC 1 cut(s) 2269
PspFI CCCAGC 2 cut(s) 1218, 3001
PspGI CCWGG 3 cut(s) 1252, 2611, 2886
PspN4I GGNNCC 1 cut(s) 380
PspPI GGNCC 2 cut(s) 1432, 1926
PspXI VCTCGAGB 1 cut(s) 417
PstI CTGCAG 1 cut(s) 1904
PstNI CAGNNNCTG 1 cut(s) 581
PsuI RGATCY 5 cut(s) 378, 1154, 1249, 1502, 1606
RsaI GTAC 4 cut(s) 761, 2342, 2428, 2944
RsaNI GTAC 4 cut(s) 760, 2341, 2427, 2943
RseI CAYNNNNRTG 3 cut(s) 305, 1340, 2646
SatI GCNGC 4 cut(s) 120, 149, 582, 3154
Sau3AI GATC 9 cut(s) 378, 640, 1084, 1154, 1249, 1502, 1606, 2044, 2899
Sau96I GGNCC 2 cut(s) 1432, 1926
ScaI AGTACT 1 cut(s) 2342
SchI GAGTC 3 cut(s) 1467, 1714, 2704
ScrFI CCNGG 4 cut(s) 93, 1254, 2613, 2888
SduI GDGCHC 1 cut(s) 2745
SfcI CTRYAG 2 cut(s) 1245, 1900
Sfr274I CTCGAG 1 cut(s) 417
SinI GGWCC 2 cut(s) 1432, 1926
SlaI CTCGAG 1 cut(s) 417
SmiI ATTTAAAT 1 cut(s) 2106
SmiMI CAYNNNNRTG 3 cut(s) 305, 1340, 2646
SmlI CTYRAG 7 cut(s) 417, 1468, 1498, 1595, 1700, 2336, 2975
SmoI CTYRAG 7 cut(s) 417, 1468, 1498, 1595, 1700, 2336, 2975
SnaBI TACGTA 1 cut(s) 759
SphI GCATGC 1 cut(s) 391
SseBI AGGCCT 1 cut(s) 1446
SsiI CCGC 9 cut(s) 104, 122, 149, 316, 391, 598, 2164, 2417, 3153
SspI AATATT 2 cut(s) 1044, 2623
SspMI CTAG 4 cut(s) 503, 692, 1103, 2405
StuI AGGCCT 1 cut(s) 1446
StyD4I CCNGG 4 cut(s) 91, 1252, 2611, 2886
StyI CCWWGG 4 cut(s) 382, 1330, 1648, 1922
SwaI ATTTAAAT 1 cut(s) 2106
TaaI ACNGT 5 cut(s) 181, 782, 1188, 1239, 2018
TaiI ACGT 5 cut(s) 52, 761, 1264, 1290, 1807
TaqI TCGA 5 cut(s) 173, 418, 1479, 2320, 2823
TatI WGTACW 2 cut(s) 2340, 2426
TauI GCSGC 2 cut(s) 151, 3156
TscAI CASTG 5 cut(s) 325, 1890, 2439, 2757, 3163
TseFI GTSAC 3 cut(s) 1090, 1879, 2269
TseI GCWGC 2 cut(s) 119, 581
Tsp45I GTSAC 3 cut(s) 1090, 1879, 2269
TspGWI ACGGA 3 cut(s) 63, 256, 879
TspRI CASTG 5 cut(s) 325, 1890, 2439, 2757, 3163
Van91I CCANNNNNTGG 2 cut(s) 1336, 2752
Vha464I CTTAAG 1 cut(s) 1498
VpaK11BI GGWCC 2 cut(s) 1432, 1926
VspI ATTAAT 1 cut(s) 1745
XceI RCATGY 1 cut(s) 391
XcmI CCANNNNNNNNNTGG 3 cut(s) 538, 1646, 2648
XhoI CTCGAG 1 cut(s) 417
XmiI GTMKAC 2 cut(s) 272, 2401
XmnI GAANNNNTTC 7 cut(s) 310, 522, 792, 1227, 1321, 2558, 2595
XspI CTAG 4 cut(s) 503, 692, 1103, 2405
ZraI GACGTC 1 cut(s) 1288
ZrmI AGTACT 1 cut(s) 2342
Zsp2I ATGCAT 3 cut(s) 1197, 2455, 2568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.