Rmu_sc0002263.1_g000024

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002263.1
OG0000105
Physical Location & Seq
Reverse (-)
108983 .. 112377
3395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002263.1_g000024.1.cds

Sequence Viewer

Length: 2199 bp
atgcttcggtggcagcaggttggaacgcagggctgcagggagggggcagcaggggctgctgtgcaaggttgcaaacgcacgggcgggcgggctgcagcgaaggctcggctagctcgggctaggggctgctttgtgaatgagttttggttttctgttttgtggctagagtcgattgggaaatctagaaccttctctcctattcctattcctagtttgataaggcacactaaacatgattttccttcaacactcccccttgtgccgctcaaacttggtggtgacgcttcatccgttgcctcgttaaaaaccttgccagaacttaggctcattggtttgagtgttcttgctgatagatctctcataactatctccaacaacgaactatggatgcatgatttgctacaagaattgggctgggaaattgttcgtgaacagtctcctaaagagccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgctgaagaaaaataagggaacagattcaatccaaggaatggtaatggagttgacaaaattacgagtggctcattggaagccagaagcctttacaaatttgtctcaacttggtcttccccatattcgtaatgtggaccttcccaaaggcctcacttgtctttctagttccttgagactcctcgaatggactggctatcccttaagatctcttccaaaaatttttgaagcagatgaacttattgaacttaacttgtgccacagcaacattaaacagctttggaagggaacaaagaattttgacaagttgaagttcatcaaactctgccattctcaaaaaattgtggagaccccagacctcgcaggtgttcagaatcttgagactttagatcttgaaggatgttctcatttggtaagaatccatcaatcccttggatttctcaaaaagcttattgtcctgaatcttaaagactgcaaaaatctcgagagtctgccaagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagaagattcccgagtttgttggaaatatggaacgtttgttggtgctatgtcttgatgagactgccattgaggaactgcctgtttcaattgaacggctgactggccttgtgacattgaatctaagcaactgcagaaaacttgtaaatgtgggggagatggactgttttgaggaaactgacgtgaatagtgggtctgcaatagaaatgtcatcttcccatgatcgcataaaatatgtgagaggttcaatctttcatggatgcaaagtagtttggagatctttaaataagttcttgccttctggattggtgccaaaagtgaatacagagccaatgtgtttccgcttgcctatatctcaaaaagtgaatacagagccaacgagttttggcttgcctatatctcaaaaagtgaatacagagccaacgagttttggcttgcctatatctcaaaaagtgaatacagagccaacgagtttccacttgcctatttctggtctgtgtaatttaacgtatctgaacctgagtaattgcaatcttggtgaaggagcatttgccaacgaattcggttactttccctctttggtgaccttgaatctaagtggaaacaattttgttcgcgttccttcaggcattcgattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaacagtagactagatttaaggacagatgatgaattcaagacttttaatgcaacacatcatcttgtatgttgcctgaagctcgatggaagagaattggaagtatatggcagacagcctgcatttcgctttagtgaagaattttgccaggttgaatcagatcacctgtggctattctatgtttctcgtgataaatactttggtacagagtggtggcgtaacagttgcagtcagcttgagttcttatttgaaacaagagggctgggtctgaaggtgaaggagtgtggagttcgtctgatatatgagcaagaagtgcaacagttgaaccaaacaaccactcaatcaagcagtaggatgtctccttatgcggatctattgattggttttgacattccagttgcaggggaaaccagtggcactagtagcagaacttgcacgcttgaagaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

732

Amino Acids

82.41

Weight (kDa)

7.94

Isoelectric Point (pI)

46.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 845
Acc36I ACCTGC 2 cut(s) 7, 845
AccB1I GGYRCC 1 cut(s) 1351
AccB7I CCANNNNNTGG 1 cut(s) 532
AccBSI CCGCTC 1 cut(s) 265
AccI GTMKAC 1 cut(s) 1756
AccII CGCG 1 cut(s) 1659
AciI CCGC 5 cut(s) 84, 88, 263, 1384, 2114
AclI AACGTT 1 cut(s) 1078
AclWI GGATC 1 cut(s) 2124
AcsI RAATTY 6 cut(s) 589, 711, 787, 1601, 1781, 1886
AcuI CTGAAG 4 cut(s) 518, 1650, 1844, 2036
AfaI GTAC 1 cut(s) 1951
AfiI CCNNNNNNNGG 3 cut(s) 532, 1532, 2147
AflII CTTAAG 1 cut(s) 694
AhlI ACTAGT 1 cut(s) 2165
AjiI CACGTC 1 cut(s) 1225
AjnI CCWGG 2 cut(s) 448, 1893
AjuI GAANNNNNNNTTGG 2 cut(s) 1688, 1720
AloI GAACNNNNNNTCC 2 cut(s) 178, 210
AluBI AGCT 6 cut(s) 113, 769, 940, 1690, 1828, 1981
AluI AGCT 6 cut(s) 113, 769, 940, 1690, 1828, 1981
Alw26I GTCTC 9 cut(s) 441, 477, 600, 661, 833, 866, 1097, 1714, 2109
AlwI GGATC 1 cut(s) 2124
AlwNI CAGNNNCTG 1 cut(s) 56
Ama87I CYCGRG 3 cut(s) 114, 974, 1055
AoxI GGCC 2 cut(s) 640, 1147
ApeKI GCWGC 7 cut(s) 13, 33, 47, 56, 92, 95, 126
ApoI RAATTY 6 cut(s) 589, 711, 787, 1601, 1781, 1886
AseI ATTAAT 1 cut(s) 1019
Asp700I GAANNNNTTC 2 cut(s) 423, 517
AspS9I GGNCC 1 cut(s) 628
AsuHPI GGTGA 5 cut(s) 290, 1592, 1636, 1901, 2032
AsuNHI GCTAGC 1 cut(s) 109
AvaI CYCGRG 3 cut(s) 114, 974, 1055
AvaII GGWCC 1 cut(s) 628
BanI GGYRCC 1 cut(s) 1351
BauI CACGAG 1 cut(s) 1932
BbsI GAAGAC 2 cut(s) 486, 599
BbvI GCAGC 7 cut(s) 20, 25, 43, 59, 79, 107, 113
BccI CCATC 4 cut(s) 921, 1195, 1753, 1826
BceAI ACGGC 1 cut(s) 1154
BcgI CGANNNNNNTGC 2 cut(s) 955, 989
BciT130I CCWGG 2 cut(s) 450, 1895
BcoDI GTCTC 9 cut(s) 441, 477, 600, 661, 833, 866, 1097, 1714, 2109
BcuI ACTAGT 1 cut(s) 2165
BfaI CTAG 8 cut(s) 110, 120, 164, 183, 210, 657, 1760, 2166
BfmI CTRYAG 3 cut(s) 34, 93, 1174
BfrI CTTAAG 1 cut(s) 694
BfuAI ACCTGC 2 cut(s) 7, 845
BglII AGATCT 4 cut(s) 353, 698, 880, 1319
BisI GCNGC 8 cut(s) 14, 34, 48, 57, 93, 96, 127, 263
BlsI GCNGC 8 cut(s) 15, 35, 49, 58, 94, 97, 128, 264
Bme1390I CCNGG 2 cut(s) 450, 1895
Bme18I GGWCC 1 cut(s) 628
BmeT110I CYCGRG 3 cut(s) 114, 974, 1055
BmgBI CACGTC 1 cut(s) 1225
BmgT120I GGNCC 1 cut(s) 628
BmiI GGNNCC 1 cut(s) 1353
BmrFI CCNGG 2 cut(s) 450, 1895
BmsI GCATC 2 cut(s) 378, 1292
BmtI GCTAGC 1 cut(s) 113
BpiI GAAGAC 2 cut(s) 486, 599
BpuEI CTTGAG 4 cut(s) 685, 890, 1712, 2003
BsaI GGTCTC 2 cut(s) 477, 833
BsaJI CCNNGG 2 cut(s) 526, 922
BsaXI ACNNNNNCTCC 2 cut(s) 178, 208
Bsc4I CCNNNNNNNGG 3 cut(s) 532, 1532, 2147
Bse1I ACTGG 4 cut(s) 688, 1150, 2141, 2157
BseBI CCWGG 2 cut(s) 450, 1895
BseDI CCNNGG 2 cut(s) 526, 922
BseGI GGATG 5 cut(s) 287, 393, 896, 1307, 2106
BseLI CCNNNNNNNGG 3 cut(s) 532, 1532, 2147
BseMII CTCAG 1 cut(s) 1553
BseNI ACTGG 4 cut(s) 688, 1150, 2141, 2157
BseRI GAGGAG 1 cut(s) 662
BseXI GCAGC 7 cut(s) 20, 25, 43, 59, 79, 107, 113
BseYI CCCAGC 2 cut(s) 414, 2008
Bsh1236I CGCG 1 cut(s) 1659
BshFI GGCC 2 cut(s) 642, 1149
BshNI GGYRCC 1 cut(s) 1351
BsiHKCI CYCGRG 3 cut(s) 114, 974, 1055
BslI CCNNNNNNNGG 3 cut(s) 532, 1532, 2147
BsmAI GTCTC 9 cut(s) 441, 477, 600, 661, 833, 866, 1097, 1714, 2109
BsmI GAATGC 1 cut(s) 1671
BsnI GGCC 2 cut(s) 642, 1149
Bso31I GGTCTC 2 cut(s) 477, 833
BsoBI CYCGRG 3 cut(s) 114, 974, 1055
Bsp143I GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
BspACI CCGC 5 cut(s) 84, 88, 263, 1384, 2114
BspANI GGCC 2 cut(s) 642, 1149
BspCNI CTCAG 1 cut(s) 1554
BspFNI CGCG 1 cut(s) 1659
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 1 cut(s) 1353
BspMAI CTGCAG 3 cut(s) 38, 97, 1178
BspMI ACCTGC 2 cut(s) 7, 845
BspOI GCTAGC 1 cut(s) 113
BspPI GGATC 1 cut(s) 2124
BspT107I GGYRCC 1 cut(s) 1351
BspTI CTTAAG 1 cut(s) 694
BspTNI GGTCTC 2 cut(s) 477, 833
BsrBI CCGCTC 1 cut(s) 265
BsrI ACTGG 4 cut(s) 688, 1150, 2141, 2157
BssECI CCNNGG 2 cut(s) 526, 922
BssMI GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
BssSI CACGAG 1 cut(s) 1932
BssT1I CCWWGG 2 cut(s) 526, 922
Bst2BI CACGAG 1 cut(s) 1932
Bst2UI CCWGG 2 cut(s) 450, 1895
Bst4CI ACNGT 5 cut(s) 435, 1208, 1754, 1970, 2067
Bst6I CTCTTC 2 cut(s) 708, 1831
BstAFI CTTAAG 1 cut(s) 694
BstAPI GCANNNNNTGC 4 cut(s) 56, 397, 2059, 2178
BstC8I GCNNGC 8 cut(s) 86, 90, 111, 1388, 1433, 1478, 1866, 2183
BstDEI CTNAG 5 cut(s) 320, 1166, 1562, 1637, 1686
BstEII GGTNACC 1 cut(s) 1624
BstF5I GGATG 5 cut(s) 287, 393, 896, 1307, 2106
BstFNI CGCG 1 cut(s) 1659
BstKTI GATC 7 cut(s) 356, 701, 883, 1267, 1322, 1909, 2119
BstMAI GTCTC 9 cut(s) 441, 477, 600, 661, 833, 866, 1097, 1714, 2109
BstMBI GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
BstNI CCWGG 2 cut(s) 450, 1895
BstPI GGTNACC 1 cut(s) 1624
BstSCI CCNGG 2 cut(s) 448, 1893
BstSFI CTRYAG 3 cut(s) 34, 93, 1174
BstUI CGCG 1 cut(s) 1659
BstV1I GCAGC 7 cut(s) 20, 25, 43, 59, 79, 107, 113
BstV2I GAAGAC 2 cut(s) 486, 599
BstX2I RGATCY 5 cut(s) 353, 698, 880, 1319, 2116
BstYI RGATCY 5 cut(s) 353, 698, 880, 1319, 2116
BsuRI GGCC 2 cut(s) 642, 1149
BtrI CACGTC 1 cut(s) 1225
BtsCI GGATG 5 cut(s) 287, 393, 896, 1307, 2106
BtsIMutI CAGTG 1 cut(s) 2164
BveI ACCTGC 2 cut(s) 7, 845
Cac8I GCNNGC 8 cut(s) 86, 90, 111, 1388, 1433, 1478, 1866, 2183
CaiI CAGNNNCTG 1 cut(s) 56
CciI TCATGA 1 cut(s) 475
Cfr13I GGNCC 1 cut(s) 628
CseI GACGC 1 cut(s) 290
Csp6I GTAC 1 cut(s) 1950
CspCI CAANNNNNGTGG 2 cut(s) 256, 291
CviAII CATG 5 cut(s) 233, 392, 476, 1262, 1298
CviQI GTAC 1 cut(s) 1950
DdeI CTNAG 5 cut(s) 320, 1166, 1562, 1637, 1686
DpnI GATC 7 cut(s) 355, 700, 882, 1266, 1321, 1908, 2118
DpnII GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
DraI TTTAAA 1 cut(s) 1326
Eam1104I CTCTTC 2 cut(s) 708, 1831
EarI CTCTTC 2 cut(s) 708, 1831
Eco130I CCWWGG 2 cut(s) 526, 922
Eco147I AGGCCT 1 cut(s) 642
Eco31I GGTCTC 2 cut(s) 477, 833
Eco47I GGWCC 1 cut(s) 628
Eco57I CTGAAG 4 cut(s) 518, 1650, 1844, 2036
Eco88I CYCGRG 3 cut(s) 114, 974, 1055
Eco91I GGTNACC 1 cut(s) 1624
EcoO65I GGTNACC 1 cut(s) 1624
EcoRI GAATTC 2 cut(s) 1601, 1781
EcoRII CCWGG 2 cut(s) 448, 1893
EcoT14I CCWWGG 2 cut(s) 526, 922
EcoT22I ATGCAT 1 cut(s) 393
ErhI CCWWGG 2 cut(s) 526, 922
FaeI CATG 5 cut(s) 236, 395, 479, 1265, 1301
FatI CATG 5 cut(s) 232, 391, 475, 1261, 1297
FauI CCCGC 2 cut(s) 77, 81
FblI GTMKAC 1 cut(s) 1756
Fnu4HI GCNGC 8 cut(s) 14, 34, 48, 57, 93, 96, 127, 263
FokI GGATG 5 cut(s) 274, 400, 903, 1314, 2113
Fsp4HI GCNGC 8 cut(s) 14, 34, 48, 57, 93, 96, 127, 263
FspBI CTAG 8 cut(s) 110, 120, 164, 183, 210, 657, 1760, 2166
GluI GCNGC 8 cut(s) 14, 34, 48, 57, 93, 96, 127, 263
GsaI CCCAGC 2 cut(s) 418, 2012
HaeIII GGCC 2 cut(s) 642, 1149
HgaI GACGC 1 cut(s) 290
Hin1II CATG 5 cut(s) 236, 395, 479, 1265, 1301
HincII GTYRAC 1 cut(s) 546
HindII GTYRAC 1 cut(s) 546
HindIII AAGCTT 2 cut(s) 938, 1688
HphI GGTGA 5 cut(s) 290, 1592, 1636, 1901, 2032
Hpy166II GTNNAC 4 cut(s) 431, 546, 628, 1757
Hpy188I TCNGA 6 cut(s) 864, 1557, 1738, 1906, 2016, 2043
Hpy8I GTNNAC 4 cut(s) 431, 546, 628, 1757
HpyCH4III ACNGT 5 cut(s) 435, 1208, 1754, 1970, 2067
HpyCH4IV ACGT 4 cut(s) 457, 1078, 1224, 1550
HpyF3I CTNAG 5 cut(s) 320, 1166, 1562, 1637, 1686
HpySE526I ACGT 4 cut(s) 457, 1078, 1224, 1550
Hsp92II CATG 5 cut(s) 236, 395, 479, 1265, 1301
Kzo9I GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
LmnI GCTCC 1 cut(s) 1586
Lsp1109I GCAGC 7 cut(s) 20, 25, 43, 59, 79, 107, 113
LweI GCATC 2 cut(s) 378, 1292
MaeI CTAG 8 cut(s) 110, 120, 164, 183, 210, 657, 1760, 2166
MaeII ACGT 4 cut(s) 457, 1078, 1224, 1550
MaeIII GTNAC 5 cut(s) 278, 1153, 1607, 1624, 1964
MalI GATC 7 cut(s) 355, 700, 882, 1266, 1321, 1908, 2118
MbiI CCGCTC 1 cut(s) 265
MboI GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
MboII GAAGA 8 cut(s) 491, 511, 599, 695, 1060, 1248, 1848, 1895
MfeI CAATTG 1 cut(s) 1131
MflI RGATCY 5 cut(s) 353, 698, 880, 1319, 2116
MlyI GAGTC 3 cut(s) 176, 663, 988
MmeI TCCRAC 2 cut(s) 396, 1045
Mph1103I ATGCAT 1 cut(s) 393
MroXI GAANNNNTTC 2 cut(s) 423, 517
MspCI CTTAAG 1 cut(s) 694
MspR9I CCNGG 2 cut(s) 450, 1895
MunI CAATTG 1 cut(s) 1131
Mva1269I GAATGC 1 cut(s) 1671
MvaI CCWGG 2 cut(s) 450, 1895
MvnI CGCG 1 cut(s) 1659
NdeII GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
NheI GCTAGC 1 cut(s) 109
NlaIII CATG 5 cut(s) 236, 395, 479, 1265, 1301
NlaIV GGNNCC 1 cut(s) 1353
NmeAIII GCCGAG 1 cut(s) 85
NmuCI GTSAC 3 cut(s) 278, 1153, 1624
NsiI ATGCAT 1 cut(s) 393
PaeR7I CTCGAG 1 cut(s) 974
PagI TCATGA 1 cut(s) 475
PaqCI CACCTGC 1 cut(s) 845
PceI AGGCCT 1 cut(s) 642
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PctI GAATGC 1 cut(s) 1671
PdmI GAANNNNTTC 2 cut(s) 423, 517
PfeI GAWTC 9 cut(s) 518, 865, 909, 952, 1004, 1051, 1162, 1633, 1901
PflMI CCANNNNNTGG 1 cut(s) 532
PkrI GCNGC 8 cut(s) 15, 35, 49, 58, 94, 97, 128, 264
PleI GAGTC 3 cut(s) 175, 663, 987
PpsI GAGTC 3 cut(s) 175, 663, 987
PshBI ATTAAT 1 cut(s) 1019
Psp1406I AACGTT 1 cut(s) 1078
Psp6I CCWGG 2 cut(s) 448, 1893
PspEI GGTNACC 1 cut(s) 1624
PspFI CCCAGC 2 cut(s) 414, 2008
PspGI CCWGG 2 cut(s) 448, 1893
PspN4I GGNNCC 1 cut(s) 1353
PspPI GGNCC 1 cut(s) 628
PstI CTGCAG 3 cut(s) 38, 97, 1178
PstNI CAGNNNCTG 1 cut(s) 56
PsuI RGATCY 5 cut(s) 353, 698, 880, 1319, 2116
RsaI GTAC 1 cut(s) 1951
RsaNI GTAC 1 cut(s) 1950
SatI GCNGC 8 cut(s) 14, 34, 48, 57, 93, 96, 127, 263
Sau3AI GATC 7 cut(s) 353, 698, 880, 1264, 1319, 1906, 2116
Sau96I GGNCC 1 cut(s) 628
SchI GAGTC 3 cut(s) 176, 663, 988
ScrFI CCNGG 2 cut(s) 450, 1895
SfaNI GCATC 2 cut(s) 378, 1292
SfcI CTRYAG 3 cut(s) 34, 93, 1174
Sfr274I CTCGAG 1 cut(s) 974
SinI GGWCC 1 cut(s) 628
SlaI CTCGAG 1 cut(s) 974
SmlI CTYRAG 6 cut(s) 664, 694, 869, 974, 1691, 1982
SmoI CTYRAG 6 cut(s) 664, 694, 869, 974, 1691, 1982
SpeI ACTAGT 1 cut(s) 2165
SseBI AGGCCT 1 cut(s) 642
SsiI CCGC 5 cut(s) 84, 88, 263, 1384, 2114
SspMI CTAG 8 cut(s) 110, 120, 164, 183, 210, 657, 1760, 2166
StuI AGGCCT 1 cut(s) 642
StyD4I CCNGG 2 cut(s) 448, 1893
StyI CCWWGG 2 cut(s) 526, 922
TaaI ACNGT 5 cut(s) 435, 1208, 1754, 1970, 2067
TaiI ACGT 4 cut(s) 460, 1081, 1227, 1553
TaqI TCGA 5 cut(s) 170, 675, 975, 1675, 1830
TauI GCSGC 1 cut(s) 265
TfiI GAWTC 9 cut(s) 518, 865, 909, 952, 1004, 1051, 1162, 1633, 1901
TscAI CASTG 1 cut(s) 2164
TseFI GTSAC 3 cut(s) 278, 1153, 1624
TseI GCWGC 7 cut(s) 13, 33, 47, 56, 92, 95, 126
Tsp45I GTSAC 3 cut(s) 278, 1153, 1624
TspDTI ATGAA 6 cut(s) 276, 492, 741, 796, 1286, 1794
TspGWI ACGGA 1 cut(s) 280
TspRI CASTG 1 cut(s) 2164
Van91I CCANNNNNTGG 1 cut(s) 532
Vha464I CTTAAG 1 cut(s) 694
VpaK11BI GGWCC 1 cut(s) 628
VspI ATTAAT 1 cut(s) 1019
XapI RAATTY 6 cut(s) 589, 711, 787, 1601, 1781, 1886
XbaI TCTAGA 1 cut(s) 182
XcmI CCANNNNNNNNNTGG 1 cut(s) 920
XhoI CTCGAG 1 cut(s) 974
XmiI GTMKAC 1 cut(s) 1756
XmnI GAANNNNTTC 2 cut(s) 423, 517
XspI CTAG 8 cut(s) 110, 120, 164, 183, 210, 657, 1760, 2166
Zsp2I ATGCAT 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.