Rmu_sc0001932.1_g000010

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001932.1
OG0000105
Physical Location & Seq
Forward (+)
27682 .. 33266
5585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001932.1_g000010.1.cds

Sequence Viewer

Length: 2940 bp
atggcgtcaacctcttgtcgtcgtcaatggaaatacgatgtctttctaagtttcagcggggcagatacccgctactattttacgggtcatctgtatgctgcactaaatcagaaaggaattctcacctttatggatgaccgagagcttgagaaaggaaaatccattagacctgaacttttagctgcaattgagcagtccagatgttcgatcgtcattctctcacccaactatgcttcctcgtcatggtgcttggatgaactcgtcaagattattcaatgcatgaaagacatgggccaacaagtcctgcccatcttcatgggcggggtggatccttctgatgtgcggcaccaaaggggaaggtttgagctcaaatgggaagcccaagtacaagtaagggaacatgaagaagtttacgggcaggataatgaggacagactaaatgcctggcgagctgctttgactgaggtggctaatctttctgggtgggatatattgcattcatatgaagcaaaagtaattcaggaaattgttaatcatatactaaagaagtccgtgtatacatcttcaactgttgacaagggcttcataggaatggattcccgcgttgatgatttaataagcaattacatatgtccacagctttgtggggtgcgttttatagggatccatggcatgcgggggataggtaagacaacacttgctcgagctatccatgatgaaatttgtcaggattttgagcaaacctgctttctttccaatgttagagaaatgtctaaaaacaatggcctagtttctctacaagaaaaacttctttccagaatcctgatggcaaaagttgaaaatatagaggatgaatacacaggagctgctatgatagaaaggaggtcgtgtagaataaaggtgcttgttgttattgatgatgtggatcagttgacacaattagagaaattggctggaagtcgcaactggtttggtccggggagtagaattatcataaccaccacagatgttcagttgttaaaggcacatgatgttgatgctacatacaaggctaacggcttaaactgtgatgaagcacttcaacttttgagtttgaaggcttttaagaaatttcccccaccagaagattatttggatctgtgcggtaatattttagggtatgctcaggggcttccgttggctctcgtggttctaggttcctttctatttggtagaagcgctgatgaatgggcaagtgcaatagataggctaaagaacacaccacataaacgaattattgaggtgcttcggattagttttgatggactggatgaaaaagacaaagaaatattcctacacatcgcttgcttttacaaggggaaggataaggatcgtgtgacacaaatactaggctattgccagctaaaccctgtcattggcttaagcgttcttgctgatagatctctcataactatctccaacaacgaactgtcgatgcatgatttgctacaagaaatgggctgggaaattgttcgtgaactgtctcctaaagagccaggcaaacgtagtagattatggtctcatgaagacatcaacaatgtgctggagagcaataagggaacagattcaatccaaggcatggtaatggagttgactaaattacaagtggctcattggaagccagaagccttttcaaagttgtctcaacttagtcttctccatattcgtaatgtggaccttcccaaaggcctcacttgtctttctaattccttgagactccttgaatggactgggtgtcccttgagatctctcccaaaaaaatttaaagcagatgaacttattgaacttaacttgtaccacagccacattaaacagctttggaagggaacaaagaatttcaacaagttgaagttcatcaaactctgccattcccaaaacattgtggagaccccagacttcgcaggtgttcagaatcttgagactttagatcttgaaggatgtatgaatttggtaagaatccatcagtcccttggatttctcaaaaagcttattttcctgaatcttaaagactgcaaaagtctcaagagtctgcctagtagaattgaaatggaatctcttgaaacattaattctttctaactgctcaaaagttaagaagattcctgagtttgttggaaatatggaacatttgttggtgctttgtctcgatgagactgccattgaggaactgcctgtttcaattgaacggttgactggccttgtgtcattgaatctaagcaactgcagaaaacttgtttgtcttccaagcaccatcaataaattgaagtctgttgaaaatcttaatctttctggatgcttgaaactcggcaaacatcaggtaaatgtgggggagatggactattttgaggaagctgatgtgaatagtgggtctgcaataaaaatgtcagctacacatgatctcataagatatgtgagaggttcaatctttcatggacgcgaagtagtttggggatctttcaataagttcttgccttctggattggtgcaaaaaatggtgcagaaagtgaataaagagcaaatgagtttccgcttgcctatatctggtctgtgtaatttaacatatctgaacctgagtaattgcaatcttggtgaagaagcatttgccaacgaatttggtcactttcccaatttggtgaccttgaatctaagtggaaacaattttgttcgcattccttcaggcgttcgattgctttctaagcttgagaactttaacttggagaattgcaagagacttcaagagttgtcagaccttccatcaaatagtatactagatttaagggcagatgatcatgaatggccaatgcctcctcttctctcatttgaatttctgcagtatttactttctggagctctcttgccttcatcttttacagttaggttcaaggtattccatttgatatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

979

Amino Acids

110.85

Weight (kDa)

6.7

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1931
Acc36I ACCTGC 2 cut(s) 752, 1931
AccB1I GGYRCC 1 cut(s) 345
AccB7I CCANNNNNTGG 1 cut(s) 1618
AccI GTMKAC 2 cut(s) 557, 2803
AccII CGCG 2 cut(s) 603, 2475
AciI CCGC 8 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2566
AclWI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2497
AcoI YGGCCR 1 cut(s) 2834
AcsI RAATTY 8 cut(s) 117, 720, 1109, 1799, 1873, 1984, 2648, 2861
AcuI CTGAAG 1 cut(s) 2697
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 387, 1835
AfeI AGCGCT 1 cut(s) 1219
AfiI CCNNNNNNNGG 4 cut(s) 243, 1415, 1618, 2579
AflII CTTAAG 1 cut(s) 1420
AhdI GACNNNNNGTC 1 cut(s) 1773
AjnI CCWGG 2 cut(s) 443, 1534
AjuI GAANNNNNNNTTGG 2 cut(s) 2735, 2767
Alw21I GWGCWC 2 cut(s) 369, 2890
AlwI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2497
AlwNI CAGNNNCTG 1 cut(s) 866
Ama87I CYCGRG 1 cut(s) 702
Aor51HI AGCGCT 1 cut(s) 1219
AoxI GGCC 5 cut(s) 292, 784, 1726, 2233, 2834
ApeKI GCWGC 4 cut(s) 98, 182, 452, 866
ApoI RAATTY 8 cut(s) 117, 720, 1109, 1799, 1873, 1984, 2648, 2861
AseI ATTAAT 1 cut(s) 2105
Asp700I GAANNNNTTC 5 cut(s) 595, 807, 1077, 1509, 1603
AspLEI GCGC 1 cut(s) 1220
AspS9I GGNCC 3 cut(s) 292, 974, 1714
AsuC2I CCSGG 1 cut(s) 978
AsuHPI GGTGA 4 cut(s) 115, 213, 2639, 2683
AvaI CYCGRG 1 cut(s) 702
AvaII GGWCC 2 cut(s) 974, 1714
BalI TGGCCA 1 cut(s) 2836
BamHI GGATCC 2 cut(s) 328, 663
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 2 cut(s) 369, 2890
BarI GAAGNNNNNNTAC 2 cut(s) 369, 401
BauI CACGAG 1 cut(s) 1184
BbsI GAAGAC 3 cut(s) 1572, 1685, 2270
Bbv12I GWGCWC 2 cut(s) 369, 2890
BbvI GCAGC 4 cut(s) 85, 169, 439, 853
BccI CCATC 7 cut(s) 317, 820, 1295, 2007, 2297, 2365, 2800
BceAI ACGGC 1 cut(s) 1072
BcgI CGANNNNNNTGC 2 cut(s) 2174, 2208
BciT130I CCWGG 2 cut(s) 445, 1536
BclI TGATCA 1 cut(s) 2824
BcnI CCSGG 1 cut(s) 978
BfaI CTAG 5 cut(s) 788, 1193, 1388, 2073, 2807
BfmI CTRYAG 2 cut(s) 2260, 2867
BfoI RGCGCY 1 cut(s) 1221
BfrI CTTAAG 1 cut(s) 1420
BfuAI ACCTGC 2 cut(s) 752, 1931
BglII AGATCT 3 cut(s) 1439, 1784, 1966
BisI GCNGC 5 cut(s) 99, 183, 344, 453, 867
BlsI GCNGC 5 cut(s) 100, 184, 345, 454, 868
Bme1390I CCNGG 3 cut(s) 445, 978, 1536
Bme18I GGWCC 2 cut(s) 974, 1714
BmeRI GACNNNNNGTC 1 cut(s) 1773
BmeT110I CYCGRG 1 cut(s) 702
BmgT120I GGNCC 3 cut(s) 292, 974, 1714
BmiI GGNNCC 4 cut(s) 330, 347, 665, 1198
BmrFI CCNGG 3 cut(s) 445, 978, 1536
BmrI ACTGGG 1 cut(s) 1779
BmsI GCATC 3 cut(s) 1027, 1464, 2321
BmuI ACTGGG 1 cut(s) 1779
BpiI GAAGAC 3 cut(s) 1572, 1685, 2270
BpmI CTGGAG 2 cut(s) 1604, 2904
Bpu10I CCTNAGC 1 cut(s) 1164
BpuEI CTTGAG 6 cut(s) 167, 1771, 1801, 1976, 2045, 2759
BpuMI CCSGG 1 cut(s) 978
BsaBI GATNNNNATC 2 cut(s) 924, 1368
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 1563, 1919
BsaJI CCNNGG 4 cut(s) 667, 977, 1612, 2008
BsaXI ACNNNNNCTCC 2 cut(s) 874, 904
Bsc4I CCNNNNNNNGG 4 cut(s) 243, 1415, 1618, 2579
Bse1I ACTGG 4 cut(s) 971, 1311, 1774, 2236
Bse8I GATNNNNATC 2 cut(s) 924, 1368
BseBI CCWGG 2 cut(s) 445, 1536
BseDI CCNNGG 4 cut(s) 667, 977, 1612, 2008
BseGI GGATG 6 cut(s) 139, 259, 856, 1315, 1982, 2336
BseJI GATNNNNATC 2 cut(s) 924, 1368
BseLI CCNNNNNNNGG 4 cut(s) 243, 1415, 1618, 2579
BseMII CTCAG 4 cut(s) 453, 1178, 2133, 2600
BseNI ACTGG 4 cut(s) 971, 1311, 1774, 2236
BseRI GAGGAG 1 cut(s) 2835
BseXI GCAGC 4 cut(s) 85, 169, 439, 853
BseYI CCCAGC 1 cut(s) 1500
BsgI GTGCAG 2 cut(s) 84, 2555
Bsh1236I CGCG 2 cut(s) 603, 2475
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 5 cut(s) 294, 786, 1728, 2235, 2836
BshNI GGYRCC 1 cut(s) 345
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 2 cut(s) 369, 2890
BsiHKCI CYCGRG 1 cut(s) 702
BsiSI CCGG 1 cut(s) 977
BslFI GGGAC 2 cut(s) 1761, 1990
BslI CCNNNNNNNGG 4 cut(s) 243, 1415, 1618, 2579
BsmFI GGGAC 2 cut(s) 1761, 1990
BsmI GAATGC 2 cut(s) 496, 2706
BsnI GGCC 5 cut(s) 294, 786, 1728, 2235, 2836
Bso31I GGTCTC 2 cut(s) 1563, 1919
BsoBI CYCGRG 1 cut(s) 702
Bsp1286I GDGCHC 2 cut(s) 369, 2890
Bsp19I CCATGG 1 cut(s) 667
BspACI CCGC 8 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2566
BspANI GGCC 5 cut(s) 294, 786, 1728, 2235, 2836
BspCNI CTCAG 4 cut(s) 454, 1177, 2134, 2601
BspFNI CGCG 2 cut(s) 603, 2475
BspHI TCATGA 2 cut(s) 1561, 2827
BspLI GGNNCC 4 cut(s) 330, 347, 665, 1198
BspMAI CTGCAG 2 cut(s) 2264, 2871
BspMI ACCTGC 2 cut(s) 752, 1931
BspPI GGATC 8 cut(s) 323, 336, 658, 671, 933, 1143, 1377, 2497
BspT107I GGYRCC 1 cut(s) 345
BspTI CTTAAG 1 cut(s) 1420
BspTNI GGTCTC 2 cut(s) 1563, 1919
BsrI ACTGG 4 cut(s) 971, 1311, 1774, 2236
BssECI CCNNGG 4 cut(s) 667, 977, 1612, 2008
BssNAI GTATAC 2 cut(s) 558, 2804
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1184
BssT1I CCWWGG 3 cut(s) 667, 1612, 2008
Bst1107I GTATAC 2 cut(s) 558, 2804
Bst2BI CACGAG 1 cut(s) 1184
Bst2UI CCWGG 2 cut(s) 445, 1536
Bst4CI ACNGT 6 cut(s) 571, 1067, 1470, 1521, 2226, 2911
Bst6I CTCTTC 1 cut(s) 2853
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1420
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstC8I GCNNGC 5 cut(s) 450, 674, 1345, 1400, 2570
BstDEI CTNAG 9 cut(s) 47, 462, 1164, 1688, 2142, 2252, 2609, 2684, 2733
BstDSI CCRYGG 1 cut(s) 667
BstEII GGTNACC 1 cut(s) 2671
BstF5I GGATG 6 cut(s) 139, 259, 856, 1315, 1982, 2336
BstFNI CGCG 2 cut(s) 603, 2475
BstH2I RGCGCY 1 cut(s) 1221
BstHHI GCGC 1 cut(s) 1220
BstMCI CGRYCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 3 cut(s) 449, 1483, 2734
BstNI CCWGG 2 cut(s) 445, 1536
BstNSI RCATGY 1 cut(s) 676
BstPI GGTNACC 1 cut(s) 2671
BstSCI CCNGG 3 cut(s) 443, 976, 1534
BstSFI CTRYAG 2 cut(s) 2260, 2867
BstUI CGCG 2 cut(s) 603, 2475
BstV1I GCAGC 4 cut(s) 85, 169, 439, 853
BstV2I GAAGAC 3 cut(s) 1572, 1685, 2270
BstX2I RGATCY 7 cut(s) 328, 663, 1135, 1439, 1784, 1966, 2489
BstXI CCANNNNNNTGG 1 cut(s) 316
BstYI RGATCY 7 cut(s) 328, 663, 1135, 1439, 1784, 1966, 2489
BstZ17I GTATAC 2 cut(s) 558, 2804
BsuRI GGCC 5 cut(s) 294, 786, 1728, 2235, 2836
BtgI CCRYGG 1 cut(s) 667
BtgZI GCGATG 1 cut(s) 1324
BtsCI GGATG 6 cut(s) 139, 259, 856, 1315, 1982, 2336
BveI ACCTGC 2 cut(s) 752, 1931
Cac8I GCNNGC 5 cut(s) 450, 674, 1345, 1400, 2570
CaiI CAGNNNCTG 1 cut(s) 866
CciI TCATGA 2 cut(s) 1561, 2827
CfoI GCGC 1 cut(s) 1220
Cfr13I GGNCC 3 cut(s) 292, 974, 1714
CseI GACGC 1 cut(s) 2481
Csp6I GTAC 2 cut(s) 386, 1834
CviQI GTAC 2 cut(s) 386, 1834
DdeI CTNAG 9 cut(s) 47, 462, 1164, 1688, 2142, 2252, 2609, 2684, 2733
DraI TTTAAA 1 cut(s) 1804
DriI GACNNNNNGTC 1 cut(s) 1773
EaeI YGGCCR 1 cut(s) 2834
Eam1104I CTCTTC 1 cut(s) 2853
Eam1105I GACNNNNNGTC 1 cut(s) 1773
EarI CTCTTC 1 cut(s) 2853
Ecl136II GAGCTC 2 cut(s) 367, 2888
Eco130I CCWWGG 3 cut(s) 667, 1612, 2008
Eco147I AGGCCT 1 cut(s) 1728
Eco24I GRGCYC 2 cut(s) 369, 2890
Eco31I GGTCTC 2 cut(s) 1563, 1919
Eco47I GGWCC 2 cut(s) 974, 1714
Eco47III AGCGCT 1 cut(s) 1219
Eco53kI GAGCTC 2 cut(s) 367, 2888
Eco57I CTGAAG 1 cut(s) 2697
Eco88I CYCGRG 1 cut(s) 702
Eco91I GGTNACC 1 cut(s) 2671
EcoICRI GAGCTC 2 cut(s) 367, 2888
EcoO65I GGTNACC 1 cut(s) 2671
EcoRI GAATTC 1 cut(s) 117
EcoRII CCWGG 2 cut(s) 443, 1534
EcoT14I CCWWGG 3 cut(s) 667, 1612, 2008
EcoT22I ATGCAT 2 cut(s) 281, 1479
EcoT38I GRGCYC 2 cut(s) 369, 2890
ErhI CCWWGG 3 cut(s) 667, 1612, 2008
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 2 cut(s) 1761, 1990
FauI CCCGC 5 cut(s) 50, 77, 314, 608, 669
FauNDI CATATG 2 cut(s) 502, 629
FbaI TGATCA 1 cut(s) 2824
FblI GTMKAC 2 cut(s) 557, 2803
Fnu4HI GCNGC 5 cut(s) 99, 183, 344, 453, 867
FokI GGATG 6 cut(s) 146, 266, 863, 1322, 1989, 2343
FriOI GRGCYC 2 cut(s) 369, 2890
Fsp4HI GCNGC 5 cut(s) 99, 183, 344, 453, 867
FspBI CTAG 5 cut(s) 788, 1193, 1388, 2073, 2807
GlaI GCGC 1 cut(s) 1219
GluI GCNGC 5 cut(s) 99, 183, 344, 453, 867
GsaI CCCAGC 1 cut(s) 1504
GsuI CTGGAG 2 cut(s) 1604, 2904
HaeII RGCGCY 1 cut(s) 1221
HaeIII GGCC 5 cut(s) 294, 786, 1728, 2235, 2836
HapII CCGG 1 cut(s) 977
HgaI GACGC 1 cut(s) 2481
HhaI GCGC 1 cut(s) 1220
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 1218
HinP1I GCGC 1 cut(s) 1218
HincII GTYRAC 5 cut(s) 9, 574, 933, 1632, 2229
HindII GTYRAC 5 cut(s) 9, 574, 933, 1632, 2229
HindIII AAGCTT 2 cut(s) 2024, 2735
HpaII CCGG 1 cut(s) 977
HphI GGTGA 4 cut(s) 115, 213, 2639, 2683
Hpy188I TCNGA 6 cut(s) 111, 337, 1290, 1950, 2604, 2785
Hpy99I CGWCG 1 cut(s) 24
HpyCH4III ACNGT 6 cut(s) 571, 1067, 1470, 1521, 2226, 2911
HpyCH4IV ACGT 1 cut(s) 1543
HpyF10VI GCNNNNNNNGC 3 cut(s) 449, 1483, 2734
HpyF3I CTNAG 9 cut(s) 47, 462, 1164, 1688, 2142, 2252, 2609, 2684, 2733
HpySE526I ACGT 1 cut(s) 1543
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 1218
Ksp22I TGATCA 1 cut(s) 2824
LmnI GCTCC 2 cut(s) 863, 2885
Lsp1109I GCAGC 4 cut(s) 85, 169, 439, 853
LweI GCATC 3 cut(s) 1027, 1464, 2321
MaeI CTAG 5 cut(s) 788, 1193, 1388, 2073, 2807
MaeII ACGT 1 cut(s) 1543
MaeIII GTNAC 3 cut(s) 1375, 2654, 2671
MfeI CAATTG 2 cut(s) 186, 2217
MflI RGATCY 7 cut(s) 328, 663, 1135, 1439, 1784, 1966, 2489
MhlI GDGCHC 2 cut(s) 369, 2890
MlsI TGGCCA 1 cut(s) 2836
MluNI TGGCCA 1 cut(s) 2836
MlyI GAGTC 2 cut(s) 1749, 2074
MmeI TCCRAC 2 cut(s) 1482, 2131
Mox20I TGGCCA 1 cut(s) 2836
Mph1103I ATGCAT 2 cut(s) 281, 1479
MroXI GAANNNNTTC 5 cut(s) 595, 807, 1077, 1509, 1603
MscI TGGCCA 1 cut(s) 2836
MslI CAYNNNNRTG 6 cut(s) 93, 128, 314, 501, 590, 1622
Msp20I TGGCCA 1 cut(s) 2836
MspA1I CMGCKG 1 cut(s) 57
MspCI CTTAAG 1 cut(s) 1420
MspI CCGG 1 cut(s) 977
MspR9I CCNGG 3 cut(s) 445, 978, 1536
MunI CAATTG 2 cut(s) 186, 2217
Mva1269I GAATGC 2 cut(s) 496, 2706
MvaI CCWGG 2 cut(s) 445, 1536
MvnI CGCG 2 cut(s) 603, 2475
MwoI GCNNNNNNNGC 3 cut(s) 449, 1483, 2734
NciI CCSGG 1 cut(s) 978
NcoI CCATGG 1 cut(s) 667
NdeI CATATG 2 cut(s) 502, 629
NlaIV GGNNCC 4 cut(s) 330, 347, 665, 1198
NmeAIII GCCGAG 1 cut(s) 2322
NmuCI GTSAC 3 cut(s) 1375, 2654, 2671
NsiI ATGCAT 2 cut(s) 281, 1479
NspI RCATGY 1 cut(s) 676
PaeI GCATGC 1 cut(s) 676
PaeR7I CTCGAG 1 cut(s) 702
PagI TCATGA 2 cut(s) 1561, 2827
PaqCI CACCTGC 1 cut(s) 1931
PceI AGGCCT 1 cut(s) 1728
PctI GAATGC 2 cut(s) 496, 2706
PdmI GAANNNNTTC 5 cut(s) 595, 807, 1077, 1509, 1603
PflMI CCANNNNNTGG 1 cut(s) 1618
PkrI GCNGC 5 cut(s) 100, 184, 345, 454, 868
Ple19I CGATCG 1 cut(s) 210
PleI GAGTC 2 cut(s) 1749, 2073
PpsI GAGTC 2 cut(s) 1749, 2073
PshBI ATTAAT 1 cut(s) 2105
Psp124BI GAGCTC 2 cut(s) 369, 2890
Psp6I CCWGG 2 cut(s) 443, 1534
PspEI GGTNACC 1 cut(s) 2671
PspFI CCCAGC 1 cut(s) 1500
PspGI CCWGG 2 cut(s) 443, 1534
PspN4I GGNNCC 4 cut(s) 330, 347, 665, 1198
PspPI GGNCC 3 cut(s) 292, 974, 1714
PspXI VCTCGAGB 1 cut(s) 702
PstI CTGCAG 2 cut(s) 2264, 2871
PstNI CAGNNNCTG 1 cut(s) 866
PsuI RGATCY 7 cut(s) 328, 663, 1135, 1439, 1784, 1966, 2489
PvuI CGATCG 1 cut(s) 210
RsaI GTAC 2 cut(s) 387, 1835
RsaNI GTAC 2 cut(s) 386, 1834
RseI CAYNNNNRTG 6 cut(s) 93, 128, 314, 501, 590, 1622
SacI GAGCTC 2 cut(s) 369, 2890
SatI GCNGC 5 cut(s) 99, 183, 344, 453, 867
Sau96I GGNCC 3 cut(s) 292, 974, 1714
SchI GAGTC 2 cut(s) 1749, 2074
ScrFI CCNGG 3 cut(s) 445, 978, 1536
SduI GDGCHC 2 cut(s) 369, 2890
SfaNI GCATC 3 cut(s) 1027, 1464, 2321
SfcI CTRYAG 2 cut(s) 2260, 2867
Sfr274I CTCGAG 1 cut(s) 702
SinI GGWCC 2 cut(s) 974, 1714
SlaI CTCGAG 1 cut(s) 702
SmiMI CAYNNNNRTG 6 cut(s) 93, 128, 314, 501, 590, 1622
SmlI CTYRAG 8 cut(s) 146, 702, 1420, 1750, 1780, 1955, 2060, 2738
SmoI CTYRAG 8 cut(s) 146, 702, 1420, 1750, 1780, 1955, 2060, 2738
SphI GCATGC 1 cut(s) 676
SseBI AGGCCT 1 cut(s) 1728
SsiI CCGC 8 cut(s) 57, 70, 321, 343, 601, 676, 1143, 2566
SspI AATATT 2 cut(s) 1150, 1329
SspMI CTAG 5 cut(s) 788, 1193, 1388, 2073, 2807
SstI GAGCTC 2 cut(s) 369, 2890
StuI AGGCCT 1 cut(s) 1728
StyD4I CCNGG 3 cut(s) 443, 976, 1534
StyI CCWWGG 3 cut(s) 667, 1612, 2008
TaaI ACNGT 6 cut(s) 571, 1067, 1470, 1521, 2226, 2911
TaiI ACGT 1 cut(s) 1546
TaqI TCGA 5 cut(s) 206, 703, 1472, 2184, 2722
TaqII GACCGA 1 cut(s) 153
TatI WGTACW 1 cut(s) 385
TauI GCSGC 1 cut(s) 346
TseFI GTSAC 3 cut(s) 1375, 2654, 2671
TseI GCWGC 4 cut(s) 98, 182, 452, 866
Tsp45I GTSAC 3 cut(s) 1375, 2654, 2671
TspGWI ACGGA 2 cut(s) 541, 1164
Van91I CCANNNNNTGG 1 cut(s) 1618
Vha464I CTTAAG 1 cut(s) 1420
VpaK11BI GGWCC 2 cut(s) 974, 1714
VspI ATTAAT 1 cut(s) 2105
XapI RAATTY 8 cut(s) 117, 720, 1109, 1799, 1873, 1984, 2648, 2861
XceI RCATGY 1 cut(s) 676
XcmI CCANNNNNNNNNTGG 2 cut(s) 823, 2006
XhoI CTCGAG 1 cut(s) 702
XmiI GTMKAC 2 cut(s) 557, 2803
XmnI GAANNNNTTC 5 cut(s) 595, 807, 1077, 1509, 1603
XspI CTAG 5 cut(s) 788, 1193, 1388, 2073, 2807
Zsp2I ATGCAT 2 cut(s) 281, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.