Rorug05G0497900

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000105
Physical Location & Seq
Forward (+)
67950195 .. 67952209
2015 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0497900.1

Sequence Viewer

Length: 1443 bp
ATGAAGAGAGCAGAACTAGTGTTCATCCCAGCACCAGGGGCCGACCACCTCGTAGCAGCCTTGCAATTCGGAAAGCGTCTGCTTCAGCGAGATGATCGAATTTCAATCACAGTTCTTGCCATCAAATCAGCAGCCCCTTCATCTTTAGGTTCATACACAGAATCCCTTGTTGCTTCGGAATCCCGGATCCAACTCATTGATGTCCCTCAAGCAGAGCTGCCTCCATTAGAGTTTGCAAGGTCACCAGCTAAATTTTTCATTCTAAACATTGAGAACCAGGTGCCTAATGTCAGGGAGGCCCTCACTAACTTCGTTTCATCATCACATTCTAAGCCCGACTCGGTTCCAATTGTTGGAGTGGTTCTTGATTTCTTCTGTGTCTCCACGATTGATGTGGTTAATGAACTCAATCTCCCTTCTTATCTTTTCATGACGAGCAATGTAGGGTATCTTTCTCTCATGTTCCACTTTCTGGCGCAGGATAGCCGGACCGGTGCGCCACCTAAAGACTCCGATCCTGATTGGTTAGTCCCAGGTATTTTCCCCCCAGTTCCTACTACAGTTTTGCCTGTGTCCATGACAGATGGTAGCTACTCTAGTTATCTTGGGATTGCTGCGAGATTTAGAGAGGCCAAAGGTATCATAGCAAATACTTGTGTTGAGTTAGAGGCACATGCTTTTAACTCGTTTTCAGAAGATCAAACTACGCCTCCGGTGTACCCAGTTGGGCCGGTGCTTGATCTCAACGATGGTCAGGCTCAGTCCAATTTAAACCAGGCGCAGCGTGACAGGATCATGAGCTGGCTTGATGATCAGCCTGAAGAATCTGTTGTGTTCTTATGCTTTGGAAGCTTGGGGAGCTTTAGTGAAGCACAAGTGAAGGAGATAGCTCTGGGGCTTGAGCAGAGTGGGCAGAGGTTCTTGTGGTCTTTGCGTTTGATACCACCAAAAGGCAGCAAAACTCTGACTCCTATCGACTGCTCGAATCTTGAGGAAGTCTTGCCGGATGGGTTCTTGGAGAGGACTAGAGGAAAGGGACTGATATGCGGGTGGGCGCCGCAGGTGGAAGTCTTGTCCCACAAGGCAACCGGAGGCTTTGTGTCGCATTGTGGGTGGAACTCGATCTTGGAGAGCTTGTGGTATGGTGTGCCTATTGTGACATGGCCTATGTATGCCGAGCAACAGCTGAATGCGTTTCGAATGGTGAAGGAGTTGGGGTTGGGATTGGAGATGAGGTTGGATTACAAGAAAGGTGGTGAGGTTGTGAAGGCAGATGAGATAGGGAAGGCAGTGGTTAGTGTAATGGAGGACATCGAGGTGAGGAAGAAGGTTAAAGAGATGGGGGTGGTGAGCAGAAAAGCTGTAGAGGACGGTGGGTCTTCCTCCGTTTCTCTTGGACGGTTTATTGAAGATGTGATGAGGAATCATTTTGAATCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC TIR UreF

Protein Analysis

480

Amino Acids

52.71

Weight (kDa)

5.02

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 268 - 405 1.4e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1051
Acc36I ACCTGC 1 cut(s) 1051
AccB1I GGYRCC 2 cut(s) 280, 1054
AccB7I CCANNNNNTGG 2 cut(s) 353, 472
AciI CCGC 2 cut(s) 1047, 1058
AclWI GGATC 4 cut(s) 181, 194, 509, 800
AcsI RAATTY 2 cut(s) 99, 251
AcuI CTGAAG 2 cut(s) 68, 840
AcyI GRCGYC 1 cut(s) 1055
AfaI GTAC 1 cut(s) 719
AfiI CCNNNNNNNGG 4 cut(s) 35, 353, 472, 950
AgeI ACCGGT 1 cut(s) 491
AgsI TTSAA 3 cut(s) 105, 1409, 1433
AhdI GACNNNNNGTC 1 cut(s) 1375
AhlI ACTAGT 1 cut(s) 16
AjnI CCWGG 4 cut(s) 34, 276, 532, 774
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AloI GAACNNNNNNTCC 2 cut(s) 396, 428
Alw26I GTCTC 1 cut(s) 385
AlwI GGATC 4 cut(s) 181, 194, 509, 800
AoxI GGCC 5 cut(s) 39, 297, 630, 728, 1163
ApeKI GCWGC 6 cut(s) 56, 131, 217, 614, 781, 954
ApoI RAATTY 2 cut(s) 99, 251
AsiGI ACCGGT 1 cut(s) 491
AspLEI GCGC 4 cut(s) 478, 499, 781, 1057
AspS9I GGNCC 4 cut(s) 39, 298, 489, 728
AsuC2I CCSGG 1 cut(s) 184
AsuHPI GGTGA 5 cut(s) 234, 1216, 1268, 1330, 1360
AsuII TTCGAA 1 cut(s) 1198
AvaII GGWCC 1 cut(s) 489
BamHI GGATCC 1 cut(s) 186
BanI GGYRCC 2 cut(s) 280, 1054
BbsI GAAGAC 1 cut(s) 1371
BbvI GCAGC 6 cut(s) 68, 143, 204, 601, 793, 966
BccI CCATC 5 cut(s) 128, 578, 743, 1001, 1333
BciT130I CCWGG 4 cut(s) 36, 278, 534, 776
BclI TGATCA 1 cut(s) 811
BcnI CCSGG 1 cut(s) 184
BcoDI GTCTC 1 cut(s) 385
BcuI ACTAGT 1 cut(s) 16
BfaI CTAG 3 cut(s) 17, 597, 1026
BfmI CTRYAG 2 cut(s) 558, 1362
BfoI RGCGCY 1 cut(s) 1058
BfuAI ACCTGC 1 cut(s) 1051
BisI GCNGC 7 cut(s) 57, 132, 218, 615, 782, 955, 1058
BlsI GCNGC 7 cut(s) 58, 133, 219, 616, 783, 956, 1059
Bme1390I CCNGG 5 cut(s) 36, 184, 278, 534, 776
Bme18I GGWCC 1 cut(s) 489
BmeRI GACNNNNNGTC 1 cut(s) 1375
BmgT120I GGNCC 4 cut(s) 39, 298, 489, 728
BmiI GGNNCC 5 cut(s) 40, 188, 282, 345, 1056
BmrFI CCNGG 5 cut(s) 36, 184, 278, 534, 776
BmrI ACTGGG 2 cut(s) 542, 716
BmuI ACTGGG 2 cut(s) 542, 716
BpiI GAAGAC 1 cut(s) 1371
Bpu14I TTCGAA 1 cut(s) 1198
BpuEI CTTGAG 3 cut(s) 192, 920, 1010
BpuMI CCSGG 1 cut(s) 184
BsaHI GRCGYC 1 cut(s) 1055
BsaJI CCNNGG 2 cut(s) 35, 532
BsaWI WCCGGW 3 cut(s) 491, 712, 1088
Bsc4I CCNNNNNNNGG 4 cut(s) 35, 353, 472, 950
Bse118I RCCGGY 2 cut(s) 491, 730
Bse1I ACTGG 2 cut(s) 548, 722
Bse3DI GCAATG 1 cut(s) 445
BseBI CCWGG 4 cut(s) 36, 278, 534, 776
BseDI CCNNGG 2 cut(s) 35, 532
BseGI GGATG 2 cut(s) 24, 1012
BseLI CCNNNNNNNGG 4 cut(s) 35, 353, 472, 950
BseMI GCAATG 1 cut(s) 445
BseMII CTCAG 1 cut(s) 773
BseNI ACTGG 2 cut(s) 548, 722
BseXI GCAGC 6 cut(s) 68, 143, 204, 601, 793, 966
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 5 cut(s) 41, 299, 632, 730, 1165
BshNI GGYRCC 2 cut(s) 280, 1054
BshTI ACCGGT 1 cut(s) 491
BsiSI CCGG 7 cut(s) 184, 487, 492, 713, 731, 1004, 1089
BslFI GGGAC 4 cut(s) 188, 515, 1050, 1060
BslI CCNNNNNNNGG 4 cut(s) 35, 353, 472, 950
BsmAI GTCTC 1 cut(s) 385
BsmFI GGGAC 4 cut(s) 188, 515, 1050, 1060
BsmI GAATGC 1 cut(s) 1195
BsnI GGCC 5 cut(s) 41, 299, 632, 730, 1165
Bsp119I TTCGAA 1 cut(s) 1198
Bsp143I GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
BspACI CCGC 2 cut(s) 1047, 1058
BspANI GGCC 5 cut(s) 41, 299, 632, 730, 1165
BspCNI CTCAG 1 cut(s) 772
BspHI TCATGA 2 cut(s) 429, 795
BspLI GGNNCC 5 cut(s) 40, 188, 282, 345, 1056
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 4 cut(s) 181, 194, 509, 800
BspT104I TTCGAA 1 cut(s) 1198
BspT107I GGYRCC 2 cut(s) 280, 1054
BsrDI GCAATG 1 cut(s) 445
BsrFI RCCGGY 2 cut(s) 491, 730
BsrI ACTGG 2 cut(s) 548, 722
BssAI RCCGGY 2 cut(s) 491, 730
BssECI CCNNGG 2 cut(s) 35, 532
BssMI GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
BssNI GRCGYC 1 cut(s) 1055
Bst2UI CCWGG 4 cut(s) 36, 278, 534, 776
Bst4CI ACNGT 4 cut(s) 112, 562, 1373, 1401
BstACI GRCGYC 1 cut(s) 1055
BstBI TTCGAA 1 cut(s) 1198
BstC8I GCNNGC 1 cut(s) 803
BstDEI CTNAG 2 cut(s) 330, 759
BstEII GGTNACC 1 cut(s) 240
BstF5I GGATG 2 cut(s) 24, 1012
BstH2I RGCGCY 1 cut(s) 1058
BstHHI GCGC 4 cut(s) 478, 499, 781, 1057
BstKTI GATC 8 cut(s) 97, 189, 517, 700, 742, 795, 814, 1125
BstMAI GTCTC 1 cut(s) 385
BstMBI GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
BstMWI GCNNNNNNNGC 4 cut(s) 38, 849, 858, 910
BstNI CCWGG 4 cut(s) 36, 278, 534, 776
BstNSI RCATGY 1 cut(s) 677
BstPI GGTNACC 1 cut(s) 240
BstSCI CCNGG 5 cut(s) 34, 182, 276, 532, 774
BstSFI CTRYAG 2 cut(s) 558, 1362
BstV1I GCAGC 6 cut(s) 68, 143, 204, 601, 793, 966
BstV2I GAAGAC 1 cut(s) 1371
BstX2I RGATCY 1 cut(s) 186
BstYI RGATCY 1 cut(s) 186
BsuRI GGCC 5 cut(s) 41, 299, 632, 730, 1165
BtsCI GGATG 2 cut(s) 24, 1012
BtsI GCAGTG 1 cut(s) 1296
BtsIMutI CAGTG 1 cut(s) 1296
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 1 cut(s) 803
CciI TCATGA 2 cut(s) 429, 795
CfoI GCGC 4 cut(s) 478, 499, 781, 1057
Cfr10I RCCGGY 2 cut(s) 491, 730
Cfr13I GGNCC 4 cut(s) 39, 298, 489, 728
CpoI CGGWCCG 1 cut(s) 489
CseI GACGC 1 cut(s) 65
CsiI ACCWGGT 1 cut(s) 276
Csp6I GTAC 1 cut(s) 718
CspAI ACCGGT 1 cut(s) 491
CspCI CAANNNNNGTGG 2 cut(s) 1234, 1269
CspI CGGWCCG 1 cut(s) 489
CviAII CATG 6 cut(s) 430, 460, 577, 674, 796, 1161
CviQI GTAC 1 cut(s) 718
DdeI CTNAG 2 cut(s) 330, 759
DinI GGCGCC 1 cut(s) 1056
DpnI GATC 8 cut(s) 96, 188, 516, 699, 741, 794, 813, 1124
DpnII GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
DraI TTTAAA 1 cut(s) 771
DriI GACNNNNNGTC 1 cut(s) 1375
Eam1105I GACNNNNNGTC 1 cut(s) 1375
Eco47I GGWCC 1 cut(s) 489
Eco57I CTGAAG 2 cut(s) 68, 840
Eco91I GGTNACC 1 cut(s) 240
EcoO109I RGGNCCY 1 cut(s) 298
EcoO65I GGTNACC 1 cut(s) 240
EcoRII CCWGG 4 cut(s) 34, 276, 532, 774
EgeI GGCGCC 1 cut(s) 1056
EheI GGCGCC 1 cut(s) 1056
FaeI CATG 6 cut(s) 433, 463, 580, 677, 799, 1164
FaqI GGGAC 4 cut(s) 188, 515, 1050, 1060
FatI CATG 6 cut(s) 429, 459, 576, 673, 795, 1160
FauI CCCGC 1 cut(s) 1040
FbaI TGATCA 1 cut(s) 811
Fnu4HI GCNGC 7 cut(s) 57, 132, 218, 615, 782, 955, 1058
FokI GGATG 2 cut(s) 11, 1019
Fsp4HI GCNGC 7 cut(s) 57, 132, 218, 615, 782, 955, 1058
FspBI CTAG 3 cut(s) 17, 597, 1026
GlaI GCGC 4 cut(s) 477, 498, 780, 1056
GluI GCNGC 7 cut(s) 57, 132, 218, 615, 782, 955, 1058
GsaI CCCAGC 1 cut(s) 32
HaeII RGCGCY 1 cut(s) 1058
HaeIII GGCC 5 cut(s) 41, 299, 632, 730, 1165
HapII CCGG 7 cut(s) 184, 487, 492, 713, 731, 1004, 1089
HgaI GACGC 1 cut(s) 65
HhaI GCGC 4 cut(s) 478, 499, 781, 1057
Hin1I GRCGYC 1 cut(s) 1055
Hin1II CATG 6 cut(s) 433, 463, 580, 677, 799, 1164
Hin6I GCGC 4 cut(s) 476, 497, 779, 1055
HinP1I GCGC 4 cut(s) 476, 497, 779, 1055
HindIII AAGCTT 1 cut(s) 850
HinfI GANTC 9 cut(s) 161, 179, 338, 509, 824, 967, 985, 1423, 1433
HpaII CCGG 7 cut(s) 184, 487, 492, 713, 731, 1004, 1089
HphI GGTGA 5 cut(s) 234, 1216, 1268, 1330, 1360
Hpy166II GTNNAC 1 cut(s) 718
Hpy188I TCNGA 6 cut(s) 71, 178, 514, 694, 966, 1438
Hpy188III TCNNGA 5 cut(s) 365, 430, 518, 796, 989
Hpy8I GTNNAC 1 cut(s) 718
HpyAV CCTTC 7 cut(s) 147, 426, 874, 1201, 1261, 1279, 1321
HpyCH4III ACNGT 4 cut(s) 112, 562, 1373, 1401
HpyCH4V TGCA 2 cut(s) 64, 236
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 849, 858, 910
HpyF3I CTNAG 2 cut(s) 330, 759
Hsp92I GRCGYC 1 cut(s) 1055
Hsp92II CATG 6 cut(s) 433, 463, 580, 677, 799, 1164
HspAI GCGC 4 cut(s) 476, 497, 779, 1055
KasI GGCGCC 1 cut(s) 1054
Ksp22I TGATCA 1 cut(s) 811
Kzo9I GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
LmnI GCTCC 1 cut(s) 858
Lsp1109I GCAGC 6 cut(s) 68, 143, 204, 601, 793, 966
MabI ACCWGGT 1 cut(s) 276
MaeI CTAG 3 cut(s) 17, 597, 1026
MaeIII GTNAC 3 cut(s) 240, 785, 1156
MalI GATC 8 cut(s) 96, 188, 516, 699, 741, 794, 813, 1124
MboI GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
MboII GAAGA 7 cut(s) 16, 364, 707, 833, 1336, 1371, 1421
MfeI CAATTG 1 cut(s) 348
MflI RGATCY 1 cut(s) 186
MluCI AATT 5 cut(s) 65, 99, 251, 348, 766
Mly113I GGCGCC 1 cut(s) 1055
MlyI GAGTC 3 cut(s) 332, 503, 961
MmeI TCCRAC 3 cut(s) 214, 334, 1218
MseI TTAA 5 cut(s) 399, 681, 770, 1332, 1441
MslI CAYNNNNRTG 1 cut(s) 1316
MspA1I CMGCKG 1 cut(s) 1186
MspI CCGG 7 cut(s) 184, 487, 492, 713, 731, 1004, 1089
MspR9I CCNGG 5 cut(s) 36, 184, 278, 534, 776
MunI CAATTG 1 cut(s) 348
Mva1269I GAATGC 1 cut(s) 1195
MvaI CCWGG 4 cut(s) 36, 278, 534, 776
MwoI GCNNNNNNNGC 4 cut(s) 38, 849, 858, 910
NarI GGCGCC 1 cut(s) 1055
NciI CCSGG 1 cut(s) 184
NdeII GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
NlaIII CATG 6 cut(s) 433, 463, 580, 677, 799, 1164
NlaIV GGNNCC 5 cut(s) 40, 188, 282, 345, 1056
NmeAIII GCCGAG 1 cut(s) 1201
NmuCI GTSAC 3 cut(s) 240, 785, 1156
NspI RCATGY 1 cut(s) 677
NspV TTCGAA 1 cut(s) 1198
PagI TCATGA 2 cut(s) 429, 795
PaqCI CACCTGC 1 cut(s) 1051
PctI GAATGC 1 cut(s) 1195
PfeI GAWTC 6 cut(s) 161, 179, 824, 985, 1423, 1433
PflMI CCANNNNNTGG 2 cut(s) 353, 472
PfoI TCCNGGA 1 cut(s) 182
PinAI ACCGGT 1 cut(s) 491
PkrI GCNGC 7 cut(s) 58, 133, 219, 616, 783, 956, 1059
PleI GAGTC 3 cut(s) 332, 503, 961
PluTI GGCGCC 1 cut(s) 1058
PpsI GAGTC 3 cut(s) 332, 503, 961
Psp6I CCWGG 4 cut(s) 34, 276, 532, 774
PspEI GGTNACC 1 cut(s) 240
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 4 cut(s) 34, 276, 532, 774
PspN4I GGNNCC 5 cut(s) 40, 188, 282, 345, 1056
PspPI GGNCC 4 cut(s) 39, 298, 489, 728
PsuI RGATCY 1 cut(s) 186
PvuII CAGCTG 1 cut(s) 1186
RsaI GTAC 1 cut(s) 719
RsaNI GTAC 1 cut(s) 718
RseI CAYNNNNRTG 1 cut(s) 1316
Rsr2I CGGWCCG 1 cut(s) 489
RsrII CGGWCCG 1 cut(s) 489
SaqAI TTAA 5 cut(s) 399, 681, 770, 1332, 1441
SatI GCNGC 7 cut(s) 57, 132, 218, 615, 782, 955, 1058
Sau3AI GATC 8 cut(s) 94, 186, 514, 697, 739, 792, 811, 1122
Sau96I GGNCC 4 cut(s) 39, 298, 489, 728
SchI GAGTC 3 cut(s) 332, 503, 961
ScrFI CCNGG 5 cut(s) 36, 184, 278, 534, 776
SexAI ACCWGGT 1 cut(s) 276
SfcI CTRYAG 2 cut(s) 558, 1362
SfoI GGCGCC 1 cut(s) 1056
SfuI TTCGAA 1 cut(s) 1198
SinI GGWCC 1 cut(s) 489
SmiMI CAYNNNNRTG 1 cut(s) 1316
SmlI CTYRAG 3 cut(s) 207, 899, 989
SmoI CTYRAG 3 cut(s) 207, 899, 989
SpeI ACTAGT 1 cut(s) 16
Sse9I AATT 5 cut(s) 65, 99, 251, 348, 766
SsiI CCGC 2 cut(s) 1047, 1058
SspDI GGCGCC 1 cut(s) 1054
SspMI CTAG 3 cut(s) 17, 597, 1026
StyD4I CCNGG 5 cut(s) 34, 182, 276, 532, 774
TaaI ACNGT 4 cut(s) 112, 562, 1373, 1401
TaqI TCGA 6 cut(s) 97, 975, 983, 1121, 1198, 1314
TasI AATT 5 cut(s) 65, 99, 251, 348, 766
TauI GCSGC 1 cut(s) 1060
TfiI GAWTC 6 cut(s) 161, 179, 824, 985, 1423, 1433
Tru1I TTAA 5 cut(s) 399, 681, 770, 1332, 1441
Tru9I TTAA 5 cut(s) 399, 681, 770, 1332, 1441
TscAI CASTG 1 cut(s) 1296
TseFI GTSAC 3 cut(s) 240, 785, 1156
TseI GCWGC 6 cut(s) 56, 131, 217, 614, 781, 954
Tsp45I GTSAC 3 cut(s) 240, 785, 1156
TspDTI ATGAA 8 cut(s) 13, 17, 129, 141, 247, 306, 417, 418
TspGWI ACGGA 1 cut(s) 1375
TspRI CASTG 1 cut(s) 1296
Van91I CCANNNNNTGG 2 cut(s) 353, 472
VpaK11BI GGWCC 1 cut(s) 489
XapI RAATTY 2 cut(s) 99, 251
XceI RCATGY 1 cut(s) 677
XcmI CCANNNNNNNNNTGG 1 cut(s) 391
XspI CTAG 3 cut(s) 17, 597, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.