Rorug01G0039400

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000105
Physical Location & Seq
Reverse (-)
6478111 .. 6479335
1225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0039400.1

Sequence Viewer

Length: 999 bp
ATGTCTGCTTTAAATAGAGCAGAGTCTCTTCAGGGCAAGAGCAAACCAGAAAGGCCATTTCTTCATTCCCTTCTTCCCAGTTTGCAACATTTTCATCTTTTCTTTCTAGTCATGACTAGAAAGAAGGTGAAACTTGCCTACATCACTAATGATAGTGCTCGAAAAGCAACATATAAGAAAAGGAAGAAGGGTCTTATGAAAAAGGTGAGCGAACTCACCACCCTTTGTGACATTGATGCTTGTGCTATTATCTACAGCCCCTATGACTCCCAGCCTGAAATTTGGCCTTCTCCCTTAGGAGTCCAACGTGTGCTTGCGCAGTTCAAGACCATGCCTGAAATGGAGCAAAGCAAGAAGATGGTGAATCAAGAGAGTTTCTTGAGGCAAAGAATCAACAAGGCTCAGGAACAACTCAAGAAGCAAAAGAAAGACAACCGAGAAAAGGAGATGGCTCGTGTGATGTTTCAAAGCCTAACTGGAAAGTCCCTCCAGGGCTTGACATTGTCAGACCTAACTGATCTTGGCTGGATCATTGACCAGCACTTGAAGGAGTTACATCTCAGGATGAAGAACATTAAGGAGGAGGTTGTGAAGAGCCAGAACCAAGTGCAAGGAGCACAGAGGGTGTCATCTGCTGTAGCAGATCATAGAATAGTGGCGATGAAGAGTAATAGAGAGGACAGTAGCAGCAACATGGCAATGAAGAGTGGTGAAGGGGGCAGCAACATGCAGCATGCAGCCCTTGACAGGCAAGCTTTTGATCACATGCATAACATGGAGGCAATGCAGCTCCAAATGATGCATATGGCAGCTCAGAAGCAGCAGAACCACTGGTTCATGGATATGATGAATGCGCCGCCACAACCACCACTGCCACATCTAGATAATCATGAGCATATGGGGTTTACCGGTGAGGATATGATGCTTCCCTTCGCGGATCATAACCACAGTACTATGTGGCCAAATCCTCCTCCTGCTGGCGGCTTTAATTTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

332

Amino Acids

38.09

Weight (kDa)

9.47

Isoelectric Point (pI)

55.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SRF-TF PF00319 47 - 88 1.1e-17 SRF-type transcription factor (DNA-binding and dimerisation domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 318
AccII CGCG 1 cut(s) 935
AciI CCGC 3 cut(s) 857, 935, 981
AclWI GGATC 2 cut(s) 536, 945
AcoI YGGCCR 1 cut(s) 959
AcsI RAATTY 1 cut(s) 279
AcuI CTGAAG 1 cut(s) 14
AfaI GTAC 1 cut(s) 952
AfiI CCNNNNNNNGG 4 cut(s) 442, 747, 977, 980
AflIII ACRYGT 1 cut(s) 307
AgeI ACCGGT 1 cut(s) 908
AgsI TTSAA 3 cut(s) 325, 467, 547
AjnI CCWGG 1 cut(s) 489
AluBI AGCT 3 cut(s) 755, 790, 812
AluI AGCT 3 cut(s) 755, 790, 812
Alw21I GWGCWC 2 cut(s) 160, 619
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 2 cut(s) 536, 945
AoxI GGCC 3 cut(s) 53, 284, 959
ApeKI GCWGC 7 cut(s) 687, 720, 730, 737, 787, 809, 820
ApoI RAATTY 1 cut(s) 279
AsiGI ACCGGT 1 cut(s) 908
AspLEI GCGC 2 cut(s) 319, 856
AsuHPI GGTGA 6 cut(s) 139, 208, 217, 373, 722, 923
AxyI CCTNAGG 1 cut(s) 295
BalI TGGCCA 1 cut(s) 961
BauI CACGAG 1 cut(s) 453
Bbv12I GWGCWC 2 cut(s) 160, 619
BbvI GCAGC 7 cut(s) 699, 732, 742, 749, 799, 821, 832
BccI CCATC 2 cut(s) 352, 442
BciT130I CCWGG 1 cut(s) 491
BclI TGATCA 1 cut(s) 760
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 3 cut(s) 107, 117, 881
BfmI CTRYAG 2 cut(s) 253, 636
BisI GCNGC 9 cut(s) 688, 721, 731, 738, 788, 810, 821, 857, 982
BlsI GCNGC 9 cut(s) 689, 722, 732, 739, 789, 811, 822, 858, 983
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 1 cut(s) 491
BmrFI CCNGG 1 cut(s) 491
BmrI ACTGGG 1 cut(s) 72
BmsI GCATC 3 cut(s) 226, 789, 912
BmuI ACTGGG 1 cut(s) 72
BpmI CTGGAG 1 cut(s) 473
Bpu10I CCTNAGC 1 cut(s) 402
BpuEI CTTGAG 2 cut(s) 398, 400
BsaJI CCNNGG 1 cut(s) 490
BsaWI WCCGGW 1 cut(s) 908
Bsc4I CCNNNNNNNGG 4 cut(s) 442, 747, 977, 980
Bse118I RCCGGY 1 cut(s) 908
Bse1I ACTGG 3 cut(s) 78, 481, 836
Bse21I CCTNAGG 1 cut(s) 295
Bse3DI GCAATG 2 cut(s) 705, 789
BseBI CCWGG 1 cut(s) 491
BseDI CCNNGG 1 cut(s) 490
BseGI GGATG 1 cut(s) 570
BseLI CCNNNNNNNGG 4 cut(s) 442, 747, 977, 980
BseMI GCAATG 2 cut(s) 705, 789
BseMII CTCAG 3 cut(s) 416, 574, 827
BseNI ACTGG 3 cut(s) 78, 481, 836
BseRI GAGGAG 2 cut(s) 596, 960
BseXI GCAGC 7 cut(s) 699, 732, 742, 749, 799, 821, 832
BseYI CCCAGC 1 cut(s) 270
Bsh1236I CGCG 1 cut(s) 935
BshFI GGCC 3 cut(s) 55, 286, 961
BshTI ACCGGT 1 cut(s) 908
BsiHKAI GWGCWC 2 cut(s) 160, 619
BsiSI CCGG 1 cut(s) 909
BslFI GGGAC 1 cut(s) 469
BslI CCNNNNNNNGG 4 cut(s) 442, 747, 977, 980
BsmAI GTCTC 1 cut(s) 30
BsmFI GGGAC 1 cut(s) 469
BsmI GAATGC 1 cut(s) 856
BsnI GGCC 3 cut(s) 55, 286, 961
Bsp1286I GDGCHC 2 cut(s) 160, 619
Bsp143I GATC 5 cut(s) 517, 528, 643, 760, 937
BspACI CCGC 3 cut(s) 857, 935, 981
BspANI GGCC 3 cut(s) 55, 286, 961
BspCNI CTCAG 3 cut(s) 415, 573, 826
BspFNI CGCG 1 cut(s) 935
BspHI TCATGA 2 cut(s) 111, 889
BspPI GGATC 2 cut(s) 536, 945
BspQI GCTCTTC 1 cut(s) 587
BsrDI GCAATG 2 cut(s) 705, 789
BsrFI RCCGGY 1 cut(s) 908
BsrI ACTGG 3 cut(s) 78, 481, 836
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 1 cut(s) 490
BssMI GATC 5 cut(s) 517, 528, 643, 760, 937
BssSI CACGAG 1 cut(s) 453
Bst2BI CACGAG 1 cut(s) 453
Bst2UI CCWGG 1 cut(s) 491
Bst4CI ACNGT 2 cut(s) 683, 950
Bst6I CTCTTC 4 cut(s) 33, 587, 659, 698
BstC8I GCNNGC 4 cut(s) 315, 735, 753, 979
BstDEI CTNAG 4 cut(s) 295, 402, 560, 813
BstF5I GGATG 1 cut(s) 570
BstFNI CGCG 1 cut(s) 935
BstHHI GCGC 2 cut(s) 319, 856
BstKTI GATC 5 cut(s) 520, 531, 646, 763, 940
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 5 cut(s) 517, 528, 643, 760, 937
BstMWI GCNNNNNNNGC 1 cut(s) 164
BstNI CCWGG 1 cut(s) 491
BstNSI RCATGY 3 cut(s) 730, 737, 769
BstSCI CCNGG 1 cut(s) 489
BstSFI CTRYAG 2 cut(s) 253, 636
BstUI CGCG 1 cut(s) 935
BstV1I GCAGC 7 cut(s) 699, 732, 742, 749, 799, 821, 832
Bsu36I CCTNAGG 1 cut(s) 295
BsuRI GGCC 3 cut(s) 55, 286, 961
BtgZI GCGATG 1 cut(s) 674
BtsCI GGATG 1 cut(s) 570
BtsI GCAGTG 1 cut(s) 869
BtsIMutI CAGTG 2 cut(s) 829, 869
Cac8I GCNNGC 4 cut(s) 315, 735, 753, 979
CciI TCATGA 2 cut(s) 111, 889
CfoI GCGC 2 cut(s) 319, 856
Cfr10I RCCGGY 1 cut(s) 908
Csp6I GTAC 1 cut(s) 951
CspAI ACCGGT 1 cut(s) 908
CviAII CATG 9 cut(s) 112, 331, 694, 727, 734, 766, 775, 838, 890
CviQI GTAC 1 cut(s) 951
DdeI CTNAG 4 cut(s) 295, 402, 560, 813
DpnI GATC 5 cut(s) 519, 530, 645, 762, 939
DpnII GATC 5 cut(s) 517, 528, 643, 760, 937
DraI TTTAAA 1 cut(s) 12
EaeI YGGCCR 1 cut(s) 959
Eam1104I CTCTTC 4 cut(s) 33, 587, 659, 698
EarI CTCTTC 4 cut(s) 33, 587, 659, 698
Eco57I CTGAAG 1 cut(s) 14
Eco81I CCTNAGG 1 cut(s) 295
EcoRII CCWGG 1 cut(s) 489
EcoT22I ATGCAT 2 cut(s) 771, 804
FaeI CATG 9 cut(s) 115, 334, 697, 730, 737, 769, 778, 841, 893
FaqI GGGAC 1 cut(s) 469
FatI CATG 9 cut(s) 111, 330, 693, 726, 733, 765, 774, 837, 889
FauNDI CATATG 2 cut(s) 804, 897
FbaI TGATCA 1 cut(s) 760
Fnu4HI GCNGC 9 cut(s) 688, 721, 731, 738, 788, 810, 821, 857, 982
FokI GGATG 1 cut(s) 577
Fsp4HI GCNGC 9 cut(s) 688, 721, 731, 738, 788, 810, 821, 857, 982
FspBI CTAG 3 cut(s) 107, 117, 881
FspI TGCGCA 1 cut(s) 318
GlaI GCGC 2 cut(s) 318, 855
GluI GCNGC 9 cut(s) 688, 721, 731, 738, 788, 810, 821, 857, 982
GsaI CCCAGC 1 cut(s) 274
GsuI CTGGAG 1 cut(s) 473
HaeIII GGCC 3 cut(s) 55, 286, 961
HapII CCGG 1 cut(s) 909
HhaI GCGC 2 cut(s) 319, 856
Hin1II CATG 9 cut(s) 115, 334, 697, 730, 737, 769, 778, 841, 893
Hin6I GCGC 2 cut(s) 317, 854
HinP1I GCGC 2 cut(s) 317, 854
HindIII AAGCTT 1 cut(s) 753
HinfI GANTC 5 cut(s) 23, 266, 300, 364, 390
HpaII CCGG 1 cut(s) 909
HphI GGTGA 6 cut(s) 139, 208, 217, 373, 722, 923
Hpy166II GTNNAC 1 cut(s) 906
Hpy188I TCNGA 2 cut(s) 508, 816
Hpy188III TCNNGA 9 cut(s) 112, 325, 368, 379, 404, 415, 562, 881, 890
Hpy8I GTNNAC 1 cut(s) 906
HpyAV CCTTC 7 cut(s) 80, 118, 181, 297, 541, 707, 940
HpyCH4III ACNGT 2 cut(s) 683, 950
HpyCH4IV ACGT 1 cut(s) 307
HpyCH4V TGCA 7 cut(s) 85, 610, 730, 737, 769, 787, 802
HpyF10VI GCNNNNNNNGC 1 cut(s) 164
HpyF3I CTNAG 4 cut(s) 295, 402, 560, 813
HpySE526I ACGT 1 cut(s) 307
Hsp92II CATG 9 cut(s) 115, 334, 697, 730, 737, 769, 778, 841, 893
HspAI GCGC 2 cut(s) 317, 854
Ksp22I TGATCA 1 cut(s) 760
Kzo9I GATC 5 cut(s) 517, 528, 643, 760, 937
LguI GCTCTTC 1 cut(s) 587
LmnI GCTCC 3 cut(s) 343, 614, 795
Lsp1109I GCAGC 7 cut(s) 699, 732, 742, 749, 799, 821, 832
LweI GCATC 3 cut(s) 226, 789, 912
MaeI CTAG 3 cut(s) 107, 117, 881
MaeII ACGT 1 cut(s) 307
MaeIII GTNAC 2 cut(s) 227, 552
MalI GATC 5 cut(s) 519, 530, 645, 762, 939
MboI GATC 5 cut(s) 517, 528, 643, 760, 937
MboII GAAGA 9 cut(s) 20, 53, 65, 196, 367, 580, 604, 676, 715
MhlI GDGCHC 2 cut(s) 160, 619
MlsI TGGCCA 1 cut(s) 961
MluCI AATT 2 cut(s) 279, 988
MluNI TGGCCA 1 cut(s) 961
MlyI GAGTC 3 cut(s) 32, 260, 309
MmeI TCCRAC 1 cut(s) 328
Mox20I TGGCCA 1 cut(s) 961
Mph1103I ATGCAT 2 cut(s) 771, 804
MscI TGGCCA 1 cut(s) 961
MseI TTAA 3 cut(s) 11, 576, 987
MslI CAYNNNNRTG 2 cut(s) 698, 842
Msp20I TGGCCA 1 cut(s) 961
MspI CCGG 1 cut(s) 909
MspR9I CCNGG 1 cut(s) 491
Mva1269I GAATGC 1 cut(s) 856
MvaI CCWGG 1 cut(s) 491
MvnI CGCG 1 cut(s) 935
MwoI GCNNNNNNNGC 1 cut(s) 164
NdeI CATATG 2 cut(s) 804, 897
NdeII GATC 5 cut(s) 517, 528, 643, 760, 937
NlaIII CATG 9 cut(s) 115, 334, 697, 730, 737, 769, 778, 841, 893
NmuCI GTSAC 1 cut(s) 227
NsbI TGCGCA 1 cut(s) 318
NsiI ATGCAT 2 cut(s) 771, 804
NspI RCATGY 3 cut(s) 730, 737, 769
PaeI GCATGC 1 cut(s) 737
PagI TCATGA 2 cut(s) 111, 889
PciSI GCTCTTC 1 cut(s) 587
PctI GAATGC 1 cut(s) 856
PfeI GAWTC 2 cut(s) 364, 390
PflFI GACNNNGTC 1 cut(s) 502
PinAI ACCGGT 1 cut(s) 908
PkrI GCNGC 9 cut(s) 689, 722, 732, 739, 789, 811, 822, 858, 983
PleI GAGTC 3 cut(s) 31, 260, 308
PpsI GAGTC 3 cut(s) 31, 260, 308
Psp6I CCWGG 1 cut(s) 489
PspFI CCCAGC 1 cut(s) 270
PspGI CCWGG 1 cut(s) 489
PsyI GACNNNGTC 1 cut(s) 502
RsaI GTAC 1 cut(s) 952
RsaNI GTAC 1 cut(s) 951
RseI CAYNNNNRTG 2 cut(s) 698, 842
SapI GCTCTTC 1 cut(s) 587
SaqAI TTAA 3 cut(s) 11, 576, 987
SatI GCNGC 9 cut(s) 688, 721, 731, 738, 788, 810, 821, 857, 982
Sau3AI GATC 5 cut(s) 517, 528, 643, 760, 937
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 3 cut(s) 32, 260, 309
ScrFI CCNGG 1 cut(s) 491
SduI GDGCHC 2 cut(s) 160, 619
SetI ASST 8 cut(s) 129, 207, 310, 513, 588, 757, 792, 814
SfaNI GCATC 3 cut(s) 226, 789, 912
SfcI CTRYAG 2 cut(s) 253, 636
SmiMI CAYNNNNRTG 2 cut(s) 698, 842
SmlI CTYRAG 2 cut(s) 379, 413
SmoI CTYRAG 2 cut(s) 379, 413
SphI GCATGC 1 cut(s) 737
Sse9I AATT 2 cut(s) 279, 988
SsiI CCGC 3 cut(s) 857, 935, 981
SspMI CTAG 3 cut(s) 107, 117, 881
StyD4I CCNGG 1 cut(s) 489
TaaI ACNGT 2 cut(s) 683, 950
TaiI ACGT 1 cut(s) 310
TaqI TCGA 1 cut(s) 160
TasI AATT 2 cut(s) 279, 988
TatI WGTACW 1 cut(s) 950
TauI GCSGC 2 cut(s) 859, 984
TfiI GAWTC 2 cut(s) 364, 390
Tru1I TTAA 3 cut(s) 11, 576, 987
Tru9I TTAA 3 cut(s) 11, 576, 987
TscAI CASTG 2 cut(s) 836, 876
TseFI GTSAC 1 cut(s) 227
TseI GCWGC 7 cut(s) 687, 720, 730, 737, 787, 809, 820
Tsp45I GTSAC 1 cut(s) 227
TspDTI ATGAA 8 cut(s) 53, 83, 212, 581, 677, 716, 826, 863
TspRI CASTG 2 cut(s) 836, 876
Tth111I GACNNNGTC 1 cut(s) 502
XapI RAATTY 1 cut(s) 279
XbaI TCTAGA 1 cut(s) 880
XceI RCATGY 3 cut(s) 730, 737, 769
XcmI CCANNNNNNNNNTGG 1 cut(s) 337
XspI CTAG 3 cut(s) 107, 117, 881
ZrmI AGTACT 1 cut(s) 952
Zsp2I ATGCAT 2 cut(s) 771, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.