Rorug06G0044200

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000105
Physical Location & Seq
Forward (+)
5656845 .. 5660249
3405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0044200.1

Sequence Viewer

Length: 1428 bp
ATGGGTTCCAAAGCAAGCTCACTATGCTTGCATTTCTTGCTTCTACTGCTTCTCTCTGGCACTGTGCTCTCGGTTCATTGGCCTGTAAAATCTCTGCCTGGCTACTCCGGTGATTTGCCCTTCAACTTTGAAACCGGGTATATTAGTGTGGATGGAATCGAGTTCTTCTACTACTTTGTCGAGTCCCAAGGGAACCCTGGAGCTGACCCTGTTTTGCTTTACCTCAATGGAGGCCCTGGATGTTCGGGTTTAAACGGATTCTTCTACCAAATTGGCCCGTTGAAGTTCAACATTACAGATTACACCGGGGGCTTACCGACATTGATGTACGAACCAGAAACATGGACAAAGACGGCCAGTATAATATTTTTGGATGCACCTGTTGGTGCTGGTTTCTCATACGCCAACGACAGTGCCGCTTGGACCACAACAGATACACTAGCAGCAAGCCAGTACAATGACTTTTTGAGAAGTTGGATAGATGAACACCCGGATTTTAGTACAAATCCAGTCTACATTGGTAGTGATTCATATGCTGGAATAAATCTTCCCATCCTTGCTCAAGATATAATCAACAGCAATGAAGCTGGAGTCGAGCCAACTATATACCTCAAAGGAATGGTACTTAGTTGTCCGCATACAAATACTGATATTGAAACAAATGCCAAAGTAATTTTTGCCCATAGGATGGCTCTAATATCAGATTCAATGTACGAGTCTGCTAAAAACAGTTGCAATGGGGATTATGTGGATACAACCACTGCAGCATGCACAGAAAGTCTCAGTGCTATAACCCAGTGCATTGCTGAAATAAGTGTAACCAGTACCTTGGATCCCGATTGCACTTTCTTGTCCCCGAAAGAAAAGGAAGAAGAGGAAGAAAAGGAAGAAAAAGCCGCCAGAAGATCTCTCAGACAAAACCCCATCAGGAGTTCATTAAGCCTACCATCATCAATTACAAACCCTAAAGATTTTTACTGCCATAATTTCCCTTATTTGCTTTCTGATGTATGGGGAAATGATGAAGGCGTCCAAGAGGCTCTTCATGTTCGACCGGGAACTGTCAAAATATTTTTTAGGTGCAACGTTAGTCTCTCGTACACTGTAGACACCGATGATGCCGTCGCTTATCACAAGAATCTGACGGATACAGGCCTGCAATTACTGGTTTTCAGTGGTGACCATGACATGGTTATTCCACATAATGGTATTGAGTACTGGATAACCACATTAGACCTCACTCTCGACACCGATTGGCGTCCTTGGTTTGTTAGTGGTCAAGTCGCGGGGTTCACAAGGAGGTATACAAACGATGGATATCGCTTGACATATGCAACTATTAAGGGAGCTGGTCACTCACCTCACGAGTACAAACGCAAGGAGGTTTTTGACATGTTCGATAGGTGGATCCATTATTATCCTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

475

Amino Acids

52.93

Weight (kDa)

4.72

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 33 - 471 1.4e-102 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 688, 1189, 1205
AccI GTMKAC 3 cut(s) 513, 1107, 1304
AccII CGCG 1 cut(s) 1286
AciI CCGC 4 cut(s) 417, 635, 897, 1286
AclI AACGTT 1 cut(s) 1086
AclWI GGATC 4 cut(s) 827, 840, 1402, 1415
AcoI YGGCCR 1 cut(s) 354
AcyI GRCGYC 2 cut(s) 1029, 1258
AfaI GTAC 9 cut(s) 329, 455, 502, 624, 713, 826, 1100, 1217, 1370
AfiI CCNNNNNNNGG 3 cut(s) 688, 1189, 1205
AflIII ACRYGT 1 cut(s) 1392
AgsI TTSAA 6 cut(s) 124, 131, 283, 289, 656, 708
AjnI CCWGG 3 cut(s) 97, 196, 235
AjuI GAANNNNNNNTTGG 2 cut(s) 1026, 1058
AluBI AGCT 4 cut(s) 18, 203, 587, 1349
AluI AGCT 4 cut(s) 18, 203, 587, 1349
Alw21I GWGCWC 1 cut(s) 69
Alw26I GTCTC 2 cut(s) 785, 1097
AlwI GGATC 4 cut(s) 827, 840, 1402, 1415
AoxI GGCC 5 cut(s) 80, 232, 274, 354, 1153
ApeKI GCWGC 2 cut(s) 443, 764
AspS9I GGNCC 3 cut(s) 233, 275, 423
AsuC2I CCSGG 4 cut(s) 136, 307, 491, 1056
AsuHPI GGTGA 3 cut(s) 122, 1190, 1350
AvaII GGWCC 1 cut(s) 423
BamHI GGATCC 2 cut(s) 832, 1407
BauI CACGAG 1 cut(s) 1364
Bbv12I GWGCWC 1 cut(s) 69
BbvI GCAGC 2 cut(s) 455, 776
BccI CCATC 6 cut(s) 146, 560, 682, 932, 955, 1307
BceAI ACGGC 2 cut(s) 369, 1106
BciT130I CCWGG 3 cut(s) 99, 198, 237
BciVI GTATCC 2 cut(s) 745, 1141
BcnI CCSGG 4 cut(s) 136, 307, 491, 1056
BcoDI GTCTC 2 cut(s) 785, 1097
BfaI CTAG 1 cut(s) 440
BfmI CTRYAG 2 cut(s) 762, 1104
BfuI GTATCC 2 cut(s) 745, 1141
BglII AGATCT 1 cut(s) 905
BisI GCNGC 4 cut(s) 417, 444, 765, 897
BlsI GCNGC 4 cut(s) 418, 445, 766, 898
BmcAI AGTACT 1 cut(s) 1217
Bme1390I CCNGG 7 cut(s) 99, 136, 198, 237, 307, 491, 1056
Bme18I GGWCC 1 cut(s) 423
BmgT120I GGNCC 3 cut(s) 233, 275, 423
BmiI GGNNCC 4 cut(s) 7, 194, 834, 1409
BmrFI CCNGG 7 cut(s) 99, 136, 198, 237, 307, 491, 1056
BmrI ACTGGG 1 cut(s) 790
BmsI GCATC 2 cut(s) 364, 1108
BmuI ACTGGG 1 cut(s) 790
BpmI CTGGAG 2 cut(s) 219, 609
BpuEI CTTGAG 1 cut(s) 546
BpuMI CCSGG 4 cut(s) 136, 307, 491, 1056
BsaBI GATNNNNATC 1 cut(s) 1317
BsaHI GRCGYC 2 cut(s) 1029, 1258
BsaJI CCNNGG 6 cut(s) 187, 196, 235, 306, 828, 1262
BsaWI WCCGGW 1 cut(s) 107
Bsc4I CCNNNNNNNGG 3 cut(s) 688, 1189, 1205
Bse1I ACTGG 7 cut(s) 357, 451, 509, 796, 822, 1170, 1223
Bse3DI GCAATG 3 cut(s) 586, 742, 801
Bse8I GATNNNNATC 1 cut(s) 1317
BseBI CCWGG 3 cut(s) 99, 198, 237
BseDI CCNNGG 6 cut(s) 187, 196, 235, 306, 828, 1262
BseGI GGATG 5 cut(s) 157, 245, 379, 552, 693
BseJI GATNNNNATC 1 cut(s) 1317
BseLI CCNNNNNNNGG 3 cut(s) 688, 1189, 1205
BseMI GCAATG 3 cut(s) 586, 742, 801
BseMII CTCAG 2 cut(s) 796, 925
BseNI ACTGG 7 cut(s) 357, 451, 509, 796, 822, 1170, 1223
BseXI GCAGC 2 cut(s) 455, 776
Bsh1236I CGCG 1 cut(s) 1286
Bsh1285I CGRYCG 1 cut(s) 1055
BshFI GGCC 5 cut(s) 82, 234, 276, 356, 1155
BsiEI CGRYCG 1 cut(s) 1055
BsiHKAI GWGCWC 1 cut(s) 69
BsiSI CCGG 5 cut(s) 108, 135, 306, 491, 1055
BslFI GGGAC 2 cut(s) 169, 838
BslI CCNNNNNNNGG 3 cut(s) 688, 1189, 1205
BsmAI GTCTC 2 cut(s) 785, 1097
BsmFI GGGAC 2 cut(s) 169, 838
BsnI GGCC 5 cut(s) 82, 234, 276, 356, 1155
Bsp1286I GDGCHC 1 cut(s) 69
Bsp143I GATC 3 cut(s) 832, 905, 1407
BspACI CCGC 4 cut(s) 417, 635, 897, 1286
BspANI GGCC 5 cut(s) 82, 234, 276, 356, 1155
BspCNI CTCAG 2 cut(s) 795, 924
BspFNI CGCG 1 cut(s) 1286
BspLI GGNNCC 4 cut(s) 7, 194, 834, 1409
BspMAI CTGCAG 1 cut(s) 766
BspPI GGATC 4 cut(s) 827, 840, 1402, 1415
BspQI GCTCTTC 1 cut(s) 1047
BsrDI GCAATG 3 cut(s) 586, 742, 801
BsrI ACTGG 7 cut(s) 357, 451, 509, 796, 822, 1170, 1223
BssECI CCNNGG 6 cut(s) 187, 196, 235, 306, 828, 1262
BssMI GATC 3 cut(s) 832, 905, 1407
BssNAI GTATAC 1 cut(s) 1305
BssNI GRCGYC 2 cut(s) 1029, 1258
BssSI CACGAG 1 cut(s) 1364
BssT1I CCWWGG 3 cut(s) 187, 828, 1262
Bst1107I GTATAC 1 cut(s) 1305
Bst2BI CACGAG 1 cut(s) 1364
Bst2UI CCWGG 3 cut(s) 99, 198, 237
Bst4CI ACNGT 5 cut(s) 64, 413, 731, 1063, 1105
Bst6I CTCTTC 2 cut(s) 867, 1047
BstACI GRCGYC 2 cut(s) 1029, 1258
BstAPI GCANNNNNTGC 1 cut(s) 37
BstC8I GCNNGC 5 cut(s) 16, 29, 448, 769, 1157
BstDEI CTNAG 3 cut(s) 626, 782, 911
BstEII GGTNACC 1 cut(s) 1178
BstF5I GGATG 5 cut(s) 157, 245, 379, 552, 693
BstFNI CGCG 1 cut(s) 1286
BstKTI GATC 3 cut(s) 835, 908, 1410
BstMAI GTCTC 2 cut(s) 785, 1097
BstMBI GATC 3 cut(s) 832, 905, 1407
BstMCI CGRYCG 1 cut(s) 1055
BstMWI GCNNNNNNNGC 3 cut(s) 24, 37, 46
BstNI CCWGG 3 cut(s) 99, 198, 237
BstNSI RCATGY 2 cut(s) 771, 1396
BstPI GGTNACC 1 cut(s) 1178
BstSCI CCNGG 7 cut(s) 97, 134, 196, 235, 305, 489, 1054
BstSFI CTRYAG 2 cut(s) 762, 1104
BstUI CGCG 1 cut(s) 1286
BstV1I GCAGC 2 cut(s) 455, 776
BstX2I RGATCY 3 cut(s) 832, 905, 1407
BstXI CCANNNNNNTGG 2 cut(s) 342, 829
BstYI RGATCY 3 cut(s) 832, 905, 1407
BstZ17I GTATAC 1 cut(s) 1305
BsuI GTATCC 2 cut(s) 745, 1141
BsuRI GGCC 5 cut(s) 82, 234, 276, 356, 1155
BtsCI GGATG 5 cut(s) 157, 245, 379, 552, 693
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 7 cut(s) 60, 418, 759, 790, 803, 1101, 1180
Cac8I GCNNGC 5 cut(s) 16, 29, 448, 769, 1157
Cfr13I GGNCC 3 cut(s) 233, 275, 423
CseI GACGC 2 cut(s) 1018, 1247
Csp6I GTAC 9 cut(s) 328, 454, 501, 623, 712, 825, 1099, 1216, 1369
CviAII CATG 6 cut(s) 342, 768, 1046, 1184, 1189, 1393
CviQI GTAC 9 cut(s) 328, 454, 501, 623, 712, 825, 1099, 1216, 1369
DdeI CTNAG 3 cut(s) 626, 782, 911
DpnI GATC 3 cut(s) 834, 907, 1409
DpnII GATC 3 cut(s) 832, 905, 1407
DraI TTTAAA 1 cut(s) 252
EaeI YGGCCR 1 cut(s) 354
Eam1104I CTCTTC 2 cut(s) 867, 1047
EarI CTCTTC 2 cut(s) 867, 1047
Eco130I CCWWGG 3 cut(s) 187, 828, 1262
Eco147I AGGCCT 1 cut(s) 1155
Eco32I GATATC 1 cut(s) 1319
Eco47I GGWCC 1 cut(s) 423
Eco91I GGTNACC 1 cut(s) 1178
EcoO109I RGGNCCY 1 cut(s) 233
EcoO65I GGTNACC 1 cut(s) 1178
EcoRII CCWGG 3 cut(s) 97, 196, 235
EcoRV GATATC 1 cut(s) 1319
EcoT14I CCWWGG 3 cut(s) 187, 828, 1262
ErhI CCWWGG 3 cut(s) 187, 828, 1262
FaeI CATG 6 cut(s) 345, 771, 1049, 1187, 1192, 1396
FalI AAGNNNNNCTT 2 cut(s) 1026, 1058
FaqI GGGAC 2 cut(s) 169, 838
FatI CATG 6 cut(s) 341, 767, 1045, 1183, 1188, 1392
FauI CCCGC 1 cut(s) 1279
FauNDI CATATG 2 cut(s) 532, 1330
FblI GTMKAC 3 cut(s) 513, 1107, 1304
Fnu4HI GCNGC 4 cut(s) 417, 444, 765, 897
FokI GGATG 5 cut(s) 164, 252, 386, 539, 700
Fsp4HI GCNGC 4 cut(s) 417, 444, 765, 897
FspBI CTAG 1 cut(s) 440
GluI GCNGC 4 cut(s) 417, 444, 765, 897
GsuI CTGGAG 2 cut(s) 219, 609
HaeIII GGCC 5 cut(s) 82, 234, 276, 356, 1155
HapII CCGG 5 cut(s) 108, 135, 306, 491, 1055
HgaI GACGC 2 cut(s) 1018, 1247
Hin1I GRCGYC 2 cut(s) 1029, 1258
Hin1II CATG 6 cut(s) 345, 771, 1049, 1187, 1192, 1396
HinfI GANTC 8 cut(s) 156, 182, 258, 527, 591, 704, 716, 1138
HpaII CCGG 5 cut(s) 108, 135, 306, 491, 1055
HphI GGTGA 3 cut(s) 122, 1190, 1350
Hpy166II GTNNAC 5 cut(s) 514, 1101, 1108, 1293, 1305
Hpy188I TCNGA 4 cut(s) 703, 914, 1006, 1143
Hpy188III TCNNGA 5 cut(s) 563, 836, 928, 1244, 1364
Hpy8I GTNNAC 5 cut(s) 514, 1101, 1108, 1293, 1305
Hpy99I CGWCG 1 cut(s) 1127
HpyAV CCTTC 2 cut(s) 130, 1019
HpyCH4III ACNGT 5 cut(s) 64, 413, 731, 1063, 1105
HpyCH4IV ACGT 1 cut(s) 1086
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 37, 46
HpyF3I CTNAG 3 cut(s) 626, 782, 911
HpySE526I ACGT 1 cut(s) 1086
Hsp92I GRCGYC 2 cut(s) 1029, 1258
Hsp92II CATG 6 cut(s) 345, 771, 1049, 1187, 1192, 1396
Kzo9I GATC 3 cut(s) 832, 905, 1407
LguI GCTCTTC 1 cut(s) 1047
LmnI GCTCC 2 cut(s) 200, 1346
Lsp1109I GCAGC 2 cut(s) 455, 776
LweI GCATC 2 cut(s) 364, 1108
MaeI CTAG 1 cut(s) 440
MaeII ACGT 1 cut(s) 1086
MaeIII GTNAC 3 cut(s) 817, 1178, 1352
MalI GATC 3 cut(s) 834, 907, 1409
MboI GATC 3 cut(s) 832, 905, 1407
MboII GAAGA 9 cut(s) 157, 253, 539, 881, 884, 890, 899, 915, 1034
MflI RGATCY 3 cut(s) 832, 905, 1407
MhlI GDGCHC 1 cut(s) 69
MluCI AATT 5 cut(s) 270, 672, 954, 985, 1160
MlyI GAGTC 3 cut(s) 191, 600, 725
MmeI TCCRAC 1 cut(s) 455
MnlI CCTC 9 cut(s) 224, 233, 620, 868, 1030, 1247, 1293, 1371, 1375
MseI TTAA 3 cut(s) 251, 938, 1341
MspI CCGG 5 cut(s) 108, 135, 306, 491, 1055
MspR9I CCNGG 7 cut(s) 99, 136, 198, 237, 307, 491, 1056
MssI GTTTAAAC 1 cut(s) 252
MvaI CCWGG 3 cut(s) 99, 198, 237
MvnI CGCG 1 cut(s) 1286
MwoI GCNNNNNNNGC 3 cut(s) 24, 37, 46
NciI CCSGG 4 cut(s) 136, 307, 491, 1056
NdeI CATATG 2 cut(s) 532, 1330
NdeII GATC 3 cut(s) 832, 905, 1407
NlaIII CATG 6 cut(s) 345, 771, 1049, 1187, 1192, 1396
NlaIV GGNNCC 4 cut(s) 7, 194, 834, 1409
NmuCI GTSAC 2 cut(s) 1178, 1352
NspI RCATGY 2 cut(s) 771, 1396
PaeI GCATGC 1 cut(s) 771
PceI AGGCCT 1 cut(s) 1155
PciI ACATGT 1 cut(s) 1392
PciSI GCTCTTC 1 cut(s) 1047
PfeI GAWTC 5 cut(s) 156, 258, 527, 704, 1138
PflMI CCANNNNNTGG 3 cut(s) 688, 1189, 1205
PkrI GCNGC 4 cut(s) 418, 445, 766, 898
PleI GAGTC 3 cut(s) 190, 599, 724
PmeI GTTTAAAC 1 cut(s) 252
PpsI GAGTC 3 cut(s) 190, 599, 724
PscI ACATGT 1 cut(s) 1392
Psp1406I AACGTT 1 cut(s) 1086
Psp6I CCWGG 3 cut(s) 97, 196, 235
PspEI GGTNACC 1 cut(s) 1178
PspGI CCWGG 3 cut(s) 97, 196, 235
PspN4I GGNNCC 4 cut(s) 7, 194, 834, 1409
PspPI GGNCC 3 cut(s) 233, 275, 423
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 3 cut(s) 832, 905, 1407
RsaI GTAC 9 cut(s) 329, 455, 502, 624, 713, 826, 1100, 1217, 1370
RsaNI GTAC 9 cut(s) 328, 454, 501, 623, 712, 825, 1099, 1216, 1369
SapI GCTCTTC 1 cut(s) 1047
SaqAI TTAA 3 cut(s) 251, 938, 1341
SatI GCNGC 4 cut(s) 417, 444, 765, 897
Sau3AI GATC 3 cut(s) 832, 905, 1407
Sau96I GGNCC 3 cut(s) 233, 275, 423
ScaI AGTACT 1 cut(s) 1217
SchI GAGTC 3 cut(s) 191, 600, 725
ScrFI CCNGG 7 cut(s) 99, 136, 198, 237, 307, 491, 1056
SduI GDGCHC 1 cut(s) 69
SfaNI GCATC 2 cut(s) 364, 1108
SfcI CTRYAG 2 cut(s) 762, 1104
SinI GGWCC 1 cut(s) 423
SmlI CTYRAG 1 cut(s) 561
SmoI CTYRAG 1 cut(s) 561
SphI GCATGC 1 cut(s) 771
Sse9I AATT 5 cut(s) 270, 672, 954, 985, 1160
SseBI AGGCCT 1 cut(s) 1155
SsiI CCGC 4 cut(s) 417, 635, 897, 1286
SspI AATATT 2 cut(s) 366, 1071
SspMI CTAG 1 cut(s) 440
StuI AGGCCT 1 cut(s) 1155
StyD4I CCNGG 7 cut(s) 97, 134, 196, 235, 305, 489, 1054
StyI CCWWGG 3 cut(s) 187, 828, 1262
TaaI ACNGT 5 cut(s) 64, 413, 731, 1063, 1105
TaiI ACGT 1 cut(s) 1089
TaqI TCGA 6 cut(s) 159, 180, 594, 1051, 1245, 1398
TasI AATT 5 cut(s) 270, 672, 954, 985, 1160
TatI WGTACW 4 cut(s) 453, 500, 1215, 1368
TauI GCSGC 2 cut(s) 419, 899
TfiI GAWTC 5 cut(s) 156, 258, 527, 704, 1138
Tru1I TTAA 3 cut(s) 251, 938, 1341
Tru9I TTAA 3 cut(s) 251, 938, 1341
TscAI CASTG 7 cut(s) 67, 418, 766, 790, 803, 1108, 1180
TseFI GTSAC 2 cut(s) 1178, 1352
TseI GCWGC 2 cut(s) 443, 764
Tsp45I GTSAC 2 cut(s) 1178, 1352
TspDTI ATGAA 7 cut(s) 65, 498, 519, 597, 924, 1034, 1038
TspGWI ACGGA 2 cut(s) 270, 1160
TspRI CASTG 7 cut(s) 67, 418, 766, 790, 803, 1108, 1180
Van91I CCANNNNNTGG 3 cut(s) 688, 1189, 1205
VpaK11BI GGWCC 1 cut(s) 423
XceI RCATGY 2 cut(s) 771, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 194
XmiI GTMKAC 3 cut(s) 513, 1107, 1304
XspI CTAG 1 cut(s) 440
ZrmI AGTACT 1 cut(s) 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.