Rmu_sc0001209.1_g000029

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001209.1
OG0000105
Physical Location & Seq
Reverse (-)
120955 .. 125522
4568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001209.1_g000029.1.cds

Sequence Viewer

Length: 3552 bp
atgctctggtgttgggcagttgcttatgagaagggtaaggatgggttactctcatcaaagaccctctatcagtcttatgtcgccgtagcctatccgtcaaccaacagttttgtctggttggctagatctacaagactgcaggaggctgagggagaaggggaagatacccgcgagactttcatctgccatctgtatcgtgcactaactgcgaaaggaattataacctttttagatgacgaaagcctggagagaggatcaaccattggcccatcactttctacagcaattgaggactcaagatcggcccttgtcgttttttcagagaatttcgcttcttcatcctggtgcttggatgaactctccaagattcttcaatgcagggaagagaggggacaaataatctacgcaattttctaccaagtggatccttctgatgtgcgcaagcaaaggggaagttttcagctccgtacagtagaggtaagggaacatgaagaagtttatgggaataaggacaaactaaaggagtggacagatgctttgagaaaggtgagcaggattgctgggtgggattcgagtacatatgaggatgatggaaaaatgattgagcacattgttacgcgtacgctaattatagtaggtgatacttatacctcttcaagtgttgacaagggcttcataggaatggattcccgcattgatgatttattaagcaattacatatgtccgcagcttggtggggtgcgttttatagggatccatggcatgcggggcataggtaagacaacacttgctcgagctatccacgatgaaatttgtcaggattttgaccgaagctgcattctttccaatgttagagaaaagtctgaaaaggatggccttgtttctctacaagaaaaactactttccagaatcctgatgacaaaaattgacattgaggatgaatatgcaggagctactatgatagaaaggcggttatgtaaactaaaggtgcttgttgtaattgatgatgtggatcgctccaatcaattacataaattggctggaaatcgggactggttcggtcgagggagtagaattattgtaaccaccccagatattcatttgctatgggtacatgatgttgatgctacatacaaggctactgggttaactcgtagaaaggcggttatgggacatgatgttgatgctacgtacaaggctactgggttaactcgtggtgaagctattcaactattgagtttaaaggctttcaagaaaagcttcccaccagaagattatttagacttgtgccaccatattttagggtatgctcaggggcttccgttggctcttgtggttttaagttcttttctatttggtagaagcaccaatgaatgggaaagtacaatagagaggctaaacaatacaccaaatagacaagttatggatgtgcttcagatcagttttgacggactagaggaaaaagacaaacagatattcctacatattgcttgtttgtacaaggggaaggacagggatcgtgtgacgcaaatactagactattgccagctaaaccctggcattggtttaagtgttcttgttgataaatctctcattactatctttaacaacaaagtgttgatgcatgatttgctacaagaaatgggcttggaaatagttcgtcggcagtcccctgaaaagccaggtaaacgaagtagattatggtttcctgaagatatccacaatgtgctgaagaaaaataagggaacagacaaaatccaagccatggtaatggacttgcctgagttagaagtggctcattggaaaccagacgccttttcaaatttatctgaactcagtcttctccatattcgtaatgtggagcttcctgaaggcctcacttttctatctaattccttgagactccttgaatggagtgggtaccccttaagatccctcccacaaaactttgaaccagacaaacttgttgaactaaacttgtgccacagcaacattgagcacctctggaaaggagcaaagaattatgacaagttaaagttcatcaaactatgccattctcaaaaaattgtccagaccccagacctcacaggtgttcaaaatcttgagtctttagatctggaaggttgtaagactttggtaatacttcatcaatccgtcggacaactcaaaaggcttattctgttgaatcttaaagattgcgagagtctcaagagcttgccaagtaagattgaaatggaatctcttgaaactttaattctttctaactgctcaaaagttaaaaagattcccgagttcgctggaaatatggagcgtttatcaaagctttatctcaatgagactgccattgaaaaactacctgtgtcaattggacgcctgagtggccttgcttctttgaatctgagcaattgcaaaaatcttgtttgccttccaagcacctttagcagattggagtctcttgaaaagcttaatctttctggatgtttgaaacttggcgaacaggataatgcgagggagaatggtgcaattagagcttctttaaatcatcttacaaaacgttgttgtgaggttgttgggaaatatttgtcatggtacttgcctcctagattagtgcaaaaagccgatatagaaccactgagtatgcagttgcctgtatctaatctgtgttattctacagagcaaaatgcaaatacatcaatgagtatccggttgccactatttcgtctatgtaatttaacagatctgaacataagtaactgcaatcttggtgaccctgcatttgccaactttgcctgttgtccttccttagttgcactaaatctgagtggaaataattttgttaagcttcctccaagcatcagatactgttttaagcttcagaacattaatttggagaattgcaggacacttcaagagttgtcgggacttccatcaaatagtaagttggatgtgagggcagatggtttttcttcactggaaatgctgtttgatgtatccaatttcaatcaattggagaaatcatatttcaatttcatcaattgcttcaaactaaatgacaatccggcctgcagtaacatagcatttgaaatgctgacgatattccttaatcgggttgatgagcttcatatccgtcagttcaagacttttaaggctactcatcatcttgtatgttgcctgaagctcaatggaagagaattacaagtatacggtaaacagcctgcatttcgctttagtgaacaatttttccaggttgagtcagatcacctttggatattctatgtgtcccgtgagaaatactttggtacagattggtggcataacagttgcagaaagcttaagttcttatttgaaacaagagggccaggtctgagggtgaaggagtgtggggtacgtctgatatatgatcgagatgtgctagaattgaaccaaactgtaactcaatccagcagtaggatgtctcccccatatgaggatatgttaattgatttcgagaatcgagttgaaggggaaaccagtggtactggtagcagaacctgcacccttgaagaactatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

1183

Amino Acids

134.54

Weight (kDa)

6.55

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
Acc16I TGCGCA 1 cut(s) 440
Acc36I ACCTGC 1 cut(s) 3539
Acc65I GGTACC 1 cut(s) 1920
AccB1I GGYRCC 1 cut(s) 1920
AccB7I CCANNNNNTGG 2 cut(s) 1374, 1765
AccI GTMKAC 1 cut(s) 3201
AccII CGCG 2 cut(s) 171, 619
AciI CCGC 6 cut(s) 169, 691, 725, 766, 970, 1163
AclI AACGTT 1 cut(s) 2554
AclWI GGATC 8 cut(s) 262, 419, 432, 748, 761, 1020, 1524, 1926
AcsI RAATTY 3 cut(s) 325, 810, 1822
AcuI CTGAAG 6 cut(s) 1418, 1731, 1751, 1890, 2858, 3194
AcyI GRCGYC 2 cut(s) 1812, 2371
AdeI CACNNNGTG 1 cut(s) 1726
AfiI CCNNNNNNNGG 7 cut(s) 731, 1374, 1562, 1765, 3106, 3447, 3466
AflII CTTAAG 2 cut(s) 1927, 3332
AflIII ACRYGT 1 cut(s) 617
AjnI CCWGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
AjuI GAANNNNNNNTTGG 2 cut(s) 2870, 2902
AloI GAACNNNNNNTCC 2 cut(s) 3225, 3257
Alw21I GWGCWC 3 cut(s) 202, 609, 2001
Alw26I GTCTC 6 cut(s) 167, 1894, 2210, 2330, 2457, 3459
Alw44I GTGCAC 1 cut(s) 198
AlwI GGATC 8 cut(s) 262, 419, 432, 748, 761, 1020, 1524, 1926
AlwNI CAGNNNCTG 2 cut(s) 2862, 3531
Ama87I CYCGRG 2 cut(s) 792, 2288
AoxI GGCC 7 cut(s) 265, 303, 874, 1873, 2380, 3060, 3356
ApaLI GTGCAC 1 cut(s) 198
ApeKI GCWGC 2 cut(s) 727, 834
ApoI RAATTY 3 cut(s) 325, 810, 1822
ArsI GACNNNNNNTTYG 4 cut(s) 520, 552, 2759, 2791
AseI ATTAAT 1 cut(s) 2883
Asp700I GAANNNNTTC 4 cut(s) 685, 1224, 1259, 1656
Asp718I GGTACC 1 cut(s) 1920
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 3 cut(s) 266, 304, 3356
AsuHPI GGTGA 6 cut(s) 559, 650, 1229, 2777, 3251, 3382
AvaI CYCGRG 2 cut(s) 792, 2288
BaeGI GKGCMC 1 cut(s) 202
BamHI GGATCC 2 cut(s) 424, 753
BanI GGYRCC 1 cut(s) 1920
BauI CACGAG 1 cut(s) 1212
BbsI GAAGAC 1 cut(s) 1832
Bbv12I GWGCWC 3 cut(s) 202, 609, 2001
BbvCI CCTCAGC 1 cut(s) 147
BbvI GCAGC 2 cut(s) 739, 821
BccI CCATC 7 cut(s) 35, 195, 277, 584, 866, 2935, 2951
BceAI ACGGC 1 cut(s) 68
BciT130I CCWGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
BciVI GTATCC 2 cut(s) 2711, 3001
BcoDI GTCTC 6 cut(s) 167, 1894, 2210, 2330, 2457, 3459
BfaI CTAG 5 cut(s) 123, 1454, 1535, 2601, 3413
BfmI CTRYAG 5 cut(s) 137, 279, 2670, 3064, 3548
BfrI CTTAAG 2 cut(s) 1927, 3332
BfuAI ACCTGC 1 cut(s) 3539
BfuI GTATCC 2 cut(s) 2711, 3001
BglI GCCNNNNNGGC 1 cut(s) 2379
BglII AGATCT 3 cut(s) 125, 2113, 2737
BisI GCNGC 2 cut(s) 728, 835
BlsI GCNGC 2 cut(s) 729, 836
Bme1390I CCNGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
BmeT110I CYCGRG 2 cut(s) 792, 2288
BmgT120I GGNCC 3 cut(s) 266, 304, 3356
BmiI GGNNCC 3 cut(s) 426, 755, 1922
BmrFI CCNGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
BmrI ACTGGG 2 cut(s) 1152, 1212
BmsI GCATC 5 cut(s) 523, 1114, 1174, 1611, 2862
BmuI ACTGGG 2 cut(s) 1152, 1212
BpiI GAAGAC 1 cut(s) 1832
BpmI CTGGAG 1 cut(s) 266
Bpu10I CCTNAGC 2 cut(s) 147, 1311
BpuEI CTTGAG 4 cut(s) 280, 1918, 2123, 2192
BsaAI YACGTR 1 cut(s) 1191
BsaBI GATNNNNATC 1 cut(s) 1011
BsaHI GRCGYC 2 cut(s) 1812, 2371
BsaJI CCNNGG 3 cut(s) 757, 1555, 1764
BsaWI WCCGGW 1 cut(s) 2703
Bsc4I CCNNNNNNNGG 7 cut(s) 731, 1374, 1562, 1765, 3106, 3447, 3466
Bse1I ACTGG 6 cut(s) 1058, 1147, 1207, 2976, 3510, 3523
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
BseDI CCNNGG 3 cut(s) 757, 1555, 1764
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 7 cut(s) 731, 1374, 1562, 1765, 3106, 3447, 3466
BseMII CTCAG 9 cut(s) 138, 1325, 1773, 1849, 2366, 2390, 2624, 2810, 3356
BseNI ACTGG 6 cut(s) 1058, 1147, 1207, 2976, 3510, 3523
BseSI GKGCMC 1 cut(s) 202
BseXI GCAGC 2 cut(s) 739, 821
BseYI CCCAGC 1 cut(s) 560
BsgI GTGCAG 1 cut(s) 3517
Bsh1236I CGCG 2 cut(s) 171, 619
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 7 cut(s) 267, 305, 876, 1875, 2382, 3062, 3358
BshNI GGYRCC 1 cut(s) 1920
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 3 cut(s) 202, 609, 2001
BsiHKCI CYCGRG 2 cut(s) 792, 2288
BsiSI CCGG 2 cut(s) 2704, 3059
BsiWI CGTACG 1 cut(s) 620
BslFI GGGAC 6 cut(s) 405, 1064, 1185, 1654, 2934, 3265
BslI CCNNNNNNNGG 7 cut(s) 731, 1374, 1562, 1765, 3106, 3447, 3466
BsmAI GTCTC 6 cut(s) 167, 1894, 2210, 2330, 2457, 3459
BsmFI GGGAC 6 cut(s) 405, 1064, 1185, 1654, 2934, 3265
BsmI GAATGC 1 cut(s) 837
BsnI GGCC 7 cut(s) 267, 305, 876, 1875, 2382, 3062, 3358
BsoBI CYCGRG 2 cut(s) 792, 2288
Bsp1286I GDGCHC 3 cut(s) 202, 609, 2001
Bsp1407I TGTACA 1 cut(s) 1497
Bsp19I CCATGG 2 cut(s) 757, 1764
BspACI CCGC 6 cut(s) 169, 691, 725, 766, 970, 1163
BspANI GGCC 7 cut(s) 267, 305, 876, 1875, 2382, 3062, 3358
BspCNI CTCAG 9 cut(s) 139, 1324, 1774, 1848, 2367, 2391, 2625, 2811, 3357
BspFNI CGCG 2 cut(s) 171, 619
BspLI GGNNCC 3 cut(s) 426, 755, 1922
BspMAI CTGCAG 2 cut(s) 141, 3068
BspMI ACCTGC 1 cut(s) 3539
BspPI GGATC 8 cut(s) 262, 419, 432, 748, 761, 1020, 1524, 1926
BspT107I GGYRCC 1 cut(s) 1920
BspTI CTTAAG 2 cut(s) 1927, 3332
BsrGI TGTACA 1 cut(s) 1497
BsrI ACTGG 6 cut(s) 1058, 1147, 1207, 2976, 3510, 3523
BssECI CCNNGG 3 cut(s) 757, 1555, 1764
BssNAI GTATAC 1 cut(s) 3202
BssNI GRCGYC 2 cut(s) 1812, 2371
BssSI CACGAG 1 cut(s) 1212
BssT1I CCWWGG 2 cut(s) 757, 1764
Bst1107I GTATAC 1 cut(s) 3202
Bst2BI CACGAG 1 cut(s) 1212
Bst2UI CCWGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
Bst4CI ACNGT 6 cut(s) 107, 472, 2864, 3206, 3320, 3430
Bst6I CTCTTC 3 cut(s) 378, 658, 3181
BstACI GRCGYC 2 cut(s) 1812, 2371
BstAFI CTTAAG 2 cut(s) 1927, 3332
BstAPI GCANNNNNTGC 3 cut(s) 206, 1630, 3531
BstAUI TGTACA 1 cut(s) 1497
BstBAI YACGTR 1 cut(s) 1191
BstC8I GCNNGC 6 cut(s) 443, 764, 1547, 2216, 3064, 3216
BstDSI CCRYGG 2 cut(s) 757, 1764
BstEII GGTNACC 1 cut(s) 2765
BstFNI CGCG 2 cut(s) 171, 619
BstHHI GCGC 1 cut(s) 441
BstMAI GTCTC 6 cut(s) 167, 1894, 2210, 2330, 2457, 3459
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 9 cut(s) 206, 768, 1630, 2379, 2430, 2439, 2528, 2786, 3531
BstNI CCWGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
BstNSI RCATGY 1 cut(s) 766
BstPI GGTNACC 1 cut(s) 2765
BstSCI CCNGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
BstSFI CTRYAG 5 cut(s) 137, 279, 2670, 3064, 3548
BstSLI GKGCMC 1 cut(s) 202
BstSNI TACGTA 1 cut(s) 1191
BstUI CGCG 2 cut(s) 171, 619
BstV1I GCAGC 2 cut(s) 739, 821
BstV2I GAAGAC 1 cut(s) 1832
BstX2I RGATCY 6 cut(s) 125, 424, 753, 1931, 2113, 2737
BstXI CCANNNNNNTGG 1 cut(s) 1771
BstYI RGATCY 6 cut(s) 125, 424, 753, 1931, 2113, 2737
BstZ17I GTATAC 1 cut(s) 3202
BsuI GTATCC 2 cut(s) 2711, 3001
BsuRI GGCC 7 cut(s) 267, 305, 876, 1875, 2382, 3062, 3358
BtgI CCRYGG 2 cut(s) 757, 1764
BtsIMutI CAGTG 3 cut(s) 2630, 2969, 3517
BveI ACCTGC 1 cut(s) 3539
Cac8I GCNNGC 6 cut(s) 443, 764, 1547, 2216, 3064, 3216
CaiI CAGNNNCTG 2 cut(s) 2862, 3531
CfoI GCGC 1 cut(s) 441
Cfr13I GGNCC 3 cut(s) 266, 304, 3356
CseI GACGC 3 cut(s) 1534, 1820, 2379
CviAII CATG 8 cut(s) 488, 758, 763, 1115, 1175, 1625, 1765, 2586
DraI TTTAAA 2 cut(s) 1242, 2538
DraIII CACNNNGTG 1 cut(s) 1726
Eam1104I CTCTTC 3 cut(s) 378, 658, 3181
EarI CTCTTC 3 cut(s) 378, 658, 3181
Eco105I TACGTA 1 cut(s) 1191
Eco130I CCWWGG 2 cut(s) 757, 1764
Eco147I AGGCCT 1 cut(s) 1875
Eco32I GATATC 1 cut(s) 1717
Eco57I CTGAAG 6 cut(s) 1418, 1731, 1751, 1890, 2858, 3194
Eco88I CYCGRG 2 cut(s) 792, 2288
Eco91I GGTNACC 1 cut(s) 2765
EcoO65I GGTNACC 1 cut(s) 2765
EcoRII CCWGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
EcoRV GATATC 1 cut(s) 1717
EcoT14I CCWWGG 2 cut(s) 757, 1764
EcoT22I ATGCAT 1 cut(s) 1626
ErhI CCWWGG 2 cut(s) 757, 1764
FaeI CATG 8 cut(s) 491, 761, 766, 1118, 1178, 1628, 1768, 2589
FalI AAGNNNNNCTT 2 cut(s) 1244, 1276
FaqI GGGAC 6 cut(s) 405, 1064, 1185, 1654, 2934, 3265
FatI CATG 8 cut(s) 487, 757, 762, 1114, 1174, 1624, 1764, 2585
FauI CCCGC 3 cut(s) 176, 698, 759
FauNDI CATATG 3 cut(s) 580, 719, 3463
FblI GTMKAC 1 cut(s) 3201
Fnu4HI GCNGC 2 cut(s) 728, 835
Fsp4HI GCNGC 2 cut(s) 728, 835
FspBI CTAG 5 cut(s) 123, 1454, 1535, 2601, 3413
FspI TGCGCA 1 cut(s) 440
GlaI GCGC 1 cut(s) 440
GluI GCNGC 2 cut(s) 728, 835
GsaI CCCAGC 1 cut(s) 564
GsuI CTGGAG 1 cut(s) 266
HaeIII GGCC 7 cut(s) 267, 305, 876, 1875, 2382, 3062, 3358
HapII CCGG 2 cut(s) 2704, 3059
HgaI GACGC 3 cut(s) 1534, 1820, 2379
HhaI GCGC 1 cut(s) 441
Hin1I GRCGYC 2 cut(s) 1812, 2371
Hin1II CATG 8 cut(s) 491, 761, 766, 1118, 1178, 1628, 1768, 2589
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HincII GTYRAC 4 cut(s) 99, 664, 1149, 1209
HindII GTYRAC 4 cut(s) 99, 664, 1149, 1209
HindIII AAGCTT 6 cut(s) 1258, 2321, 2462, 2840, 2870, 3329
HpaI GTTAAC 2 cut(s) 1149, 1209
HpaII CCGG 2 cut(s) 2704, 3059
HphI GGTGA 6 cut(s) 559, 650, 1229, 2777, 3251, 3382
Hpy99I CGWCG 2 cut(s) 1665, 2159
HpyCH4III ACNGT 6 cut(s) 107, 472, 2864, 3206, 3320, 3430
HpyCH4IV ACGT 3 cut(s) 1190, 2554, 3388
HpyF10VI GCNNNNNNNGC 9 cut(s) 206, 768, 1630, 2379, 2430, 2439, 2528, 2786, 3531
HpySE526I ACGT 3 cut(s) 1190, 2554, 3388
Hsp92I GRCGYC 2 cut(s) 1812, 2371
Hsp92II CATG 8 cut(s) 491, 761, 766, 1118, 1178, 1628, 1768, 2589
HspAI GCGC 1 cut(s) 439
KpnI GGTACC 1 cut(s) 1924
KspAI GTTAAC 2 cut(s) 1149, 1209
LmnI GCTCC 6 cut(s) 468, 950, 1022, 1861, 2012, 2308
Lsp1109I GCAGC 2 cut(s) 739, 821
LweI GCATC 5 cut(s) 523, 1114, 1174, 1611, 2862
MaeI CTAG 5 cut(s) 123, 1454, 1535, 2601, 3413
MaeII ACGT 3 cut(s) 1190, 2554, 3388
MaeIII GTNAC 8 cut(s) 45, 613, 1081, 1522, 2750, 2765, 3068, 3430
MfeI CAATTG 5 cut(s) 285, 2364, 2404, 3005, 3034
MflI RGATCY 6 cut(s) 125, 424, 753, 1931, 2113, 2737
MhlI GDGCHC 3 cut(s) 202, 609, 2001
MluI ACGCGT 1 cut(s) 617
MlyI GAGTC 6 cut(s) 287, 1896, 2114, 2212, 2459, 3260
MmeI TCCRAC 2 cut(s) 2137, 2922
Mph1103I ATGCAT 1 cut(s) 1626
MroXI GAANNNNTTC 4 cut(s) 685, 1224, 1259, 1656
MslI CAYNNNNRTG 3 cut(s) 343, 680, 1769
MspCI CTTAAG 2 cut(s) 1927, 3332
MspI CCGG 2 cut(s) 2704, 3059
MspR9I CCNGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
MunI CAATTG 5 cut(s) 285, 2364, 2404, 3005, 3034
Mva1269I GAATGC 1 cut(s) 837
MvaI CCWGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
MvnI CGCG 2 cut(s) 171, 619
MwoI GCNNNNNNNGC 9 cut(s) 206, 768, 1630, 2379, 2430, 2439, 2528, 2786, 3531
NcoI CCATGG 2 cut(s) 757, 1764
NdeI CATATG 3 cut(s) 580, 719, 3463
NlaIII CATG 8 cut(s) 491, 761, 766, 1118, 1178, 1628, 1768, 2589
NlaIV GGNNCC 3 cut(s) 426, 755, 1922
NmuCI GTSAC 2 cut(s) 1522, 2765
NsbI TGCGCA 1 cut(s) 440
NsiI ATGCAT 1 cut(s) 1626
NspI RCATGY 1 cut(s) 766
PaeI GCATGC 1 cut(s) 766
PaeR7I CTCGAG 1 cut(s) 792
PceI AGGCCT 1 cut(s) 1875
PctI GAATGC 1 cut(s) 837
PdmI GAANNNNTTC 4 cut(s) 685, 1224, 1259, 1656
PfeI GAWTC 9 cut(s) 367, 569, 686, 909, 2185, 2237, 2284, 2395, 3490
Pfl23II CGTACG 1 cut(s) 620
PflMI CCANNNNNTGG 2 cut(s) 1374, 1765
PkrI GCNGC 2 cut(s) 729, 836
PleI GAGTC 6 cut(s) 287, 1896, 2113, 2211, 2458, 3259
PpsI GAGTC 6 cut(s) 287, 1896, 2113, 2211, 2458, 3259
Ppu21I YACGTR 1 cut(s) 1191
PshBI ATTAAT 1 cut(s) 2883
PsiI TTATAA 1 cut(s) 221
Psp1406I AACGTT 1 cut(s) 2554
Psp6I CCWGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
PspEI GGTNACC 1 cut(s) 2765
PspFI CCCAGC 1 cut(s) 560
PspGI CCWGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
PspLI CGTACG 1 cut(s) 620
PspN4I GGNNCC 3 cut(s) 426, 755, 1922
PspPI GGNCC 3 cut(s) 266, 304, 3356
PspXI VCTCGAGB 1 cut(s) 792
PstI CTGCAG 2 cut(s) 141, 3068
PstNI CAGNNNCTG 2 cut(s) 2862, 3531
PsuI RGATCY 6 cut(s) 125, 424, 753, 1931, 2113, 2737
RseI CAYNNNNRTG 3 cut(s) 343, 680, 1769
SatI GCNGC 2 cut(s) 728, 835
Sau96I GGNCC 3 cut(s) 266, 304, 3356
SchI GAGTC 6 cut(s) 287, 1896, 2114, 2212, 2459, 3260
ScrFI CCNGG 6 cut(s) 245, 343, 1557, 1683, 3245, 3360
SduI GDGCHC 3 cut(s) 202, 609, 2001
SfaNI GCATC 5 cut(s) 523, 1114, 1174, 1611, 2862
SfcI CTRYAG 5 cut(s) 137, 279, 2670, 3064, 3548
Sfr274I CTCGAG 1 cut(s) 792
SlaI CTCGAG 1 cut(s) 792
SmiMI CAYNNNNRTG 3 cut(s) 343, 680, 1769
SmlI CTYRAG 7 cut(s) 295, 792, 1897, 1927, 2102, 2207, 3332
SmoI CTYRAG 7 cut(s) 295, 792, 1897, 1927, 2102, 2207, 3332
SnaBI TACGTA 1 cut(s) 1191
SphI GCATGC 1 cut(s) 766
SseBI AGGCCT 1 cut(s) 1875
SsiI CCGC 6 cut(s) 169, 691, 725, 766, 970, 1163
SspI AATATT 1 cut(s) 2579
SspMI CTAG 5 cut(s) 123, 1454, 1535, 2601, 3413
StuI AGGCCT 1 cut(s) 1875
StyD4I CCNGG 6 cut(s) 243, 341, 1555, 1681, 3243, 3358
StyI CCWWGG 2 cut(s) 757, 1764
TaaI ACNGT 6 cut(s) 107, 472, 2864, 3206, 3320, 3430
TaiI ACGT 3 cut(s) 1193, 2557, 3391
TaqI TCGA 6 cut(s) 572, 793, 1063, 3403, 3486, 3493
TaqII GACCGA 2 cut(s) 843, 1049
TatI WGTACW 3 cut(s) 575, 1382, 1497
TfiI GAWTC 9 cut(s) 367, 569, 686, 909, 2185, 2237, 2284, 2395, 3490
TscAI CASTG 3 cut(s) 2637, 2976, 3517
TseFI GTSAC 2 cut(s) 1522, 2765
TseI GCWGC 2 cut(s) 727, 834
Tsp45I GTSAC 2 cut(s) 1522, 2765
TspGWI ACGGA 6 cut(s) 84, 455, 1311, 1464, 2143, 3116
TspRI CASTG 3 cut(s) 2637, 2976, 3517
Van91I CCANNNNNTGG 2 cut(s) 1374, 1765
Vha464I CTTAAG 2 cut(s) 1927, 3332
VneI GTGCAC 1 cut(s) 198
VspI ATTAAT 1 cut(s) 2883
XapI RAATTY 3 cut(s) 325, 810, 1822
XceI RCATGY 1 cut(s) 766
XcmI CCANNNNNNNNNTGG 1 cut(s) 1553
XhoI CTCGAG 1 cut(s) 792
XmiI GTMKAC 1 cut(s) 3201
XmnI GAANNNNTTC 4 cut(s) 685, 1224, 1259, 1656
XspI CTAG 5 cut(s) 123, 1454, 1535, 2601, 3413
Zsp2I ATGCAT 1 cut(s) 1626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.