Rmu_sc0004368.1_g000031

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004368.1
OG0000105
Physical Location & Seq
Forward (+)
133327 .. 135637
2311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004368.1_g000031.1.cds

Sequence Viewer

Length: 1941 bp
atgttgattttttctgaggccttgagggatcaggatggaagaatagaaatggagagtagtaaccatccaagtaaaattagcattttgcatttgcttactggaactgagagagaacttgttgaggcaattgtttgggatattgggagtaaggtggtggtgtataaatcttcaagtgttgacaagggcttcgtaggaatggatgtccgtgttgatgatttattagataattacatacctcaaggggatgaggtacgaattatagggatacatgggatacgaggagttggtaagacaacgcttgctcgagctttttatgatgactttggtcaggattttgagcatagatgctttcttttcaatgttagagaaagctctaaaaggggtggcctagtttctttacaaaagaaccttctttccagcatcttgacggacaaaatcgaatgcataaaggatgaatatacaggagctgctatgattcaaagaagtttatgtaaaataagggtgcttgttgttattgatgatgtggatcagtcggcacagttagaaaacttggctggaagtcgtgactggtttggtccagggagcagaattgtcataaccaccacggatattcacttgttagaggcacatgatgttgatgctacatacaaggctaccgggttaaattctggtgacgctcttcaactcttgagtttaaaggctttcaagaaaagcttcccaccagaaaattatttggacttgtgctaccatattttagggtatgctcaagggctgccgttagctcttgtggttttaggttcttttttatgtggtagaaagcccaatgaatgggcaagtgcaattgataggctaaaaaatacaccaaatagaggaattatggatgtgcttcagattagttttgatggtctagaggatatagagaaagaaatattcctacatattgcttgtttttacaaggggaaagactggcatcgtgtgacacaaatactagactattgtgacctgaaccctatcattggattaagtgttcttgttgataaatctctcattactacttccagcaatgaactgtcaatgcatgatttgctacaagaaatgggctgggaaatagttcgtcgagagtctcgtgatgagccaggcaaacgtagtaggttatggtctcatgaagatatccacaatatgttggagaaaaatgagggaacaaaagcaatccatggcatggtaatgcagttgcctaaattagaagtagcttattggaatgcagaagccttctcaaatttgtctcaacttcgtcttctacatatccgtaatgtggaccttcccaaaggcctcacttgtctttctaattccttgagactcctggaatggcctgggtgtctgttaagatctctcccacaaaagtttgaaccagacaaacttattgaacttgacttgtgtaacagcaatattgaacatctttggaaaggaacaaagaattttaagaagttgaagttcatcaaactctgccattcaaaaaacattgtggagaccccagacctcacaggcgttcagaatcttgagagtttagatcttgaaggatgtaagagtttggtaagaatccatcaatcccttggatttcttaaaaagcttactgtcctgaatcttaaagactgcaaaagtcttgagaatctgccaggtagaattgaaatggaatctctagaaaaattaattctttctaactgttcaaaaattaaaaagattcccgagtttgatggaaatatggagcgtctgtctgtgcttcatctcgacgggattgccattgaggaactgcctgtttcaattgaacgcctgagtggccttgtgtcattgaacctaagtaactgcacaaatcttgtttgtcttccaaacaccggactttctttttccaatactcagattccgcgaaacaaactcacagcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

646

Amino Acids

72.74

Weight (kDa)

6.02

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000105)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00561 FvH4_2g00570
malus_domestica MD10G1006400.v1.1 MD10G1006800.v1.1 MD10G1007300.v1.1 MD12G1125200.v1.1 MD12G1125400.v1.1
prunus_persica Prupe.2G059200_v2.0.a1 Prupe.8G005200_v2.0.a1 Prupe.8G046600_v2.0.a1
pyrus_communis pycom10g00460 pycom12g12340 pycom12g12360 pycom14g00580
rosa_chinensis RchiOBHm_Chr1g0315021 RchiOBHm_Chr1g0319431 RchiOBHm_Chr1g0319441 RchiOBHm_Chr1g0321301 RchiOBHm_Chr1g0322041 RchiOBHm_Chr1g0322381 RchiOBHm_Chr1g0322421 RchiOBHm_Chr1g0322491 RchiOBHm_Chr1g0322521 RchiOBHm_Chr1g0322531 RchiOBHm_Chr1g0322651 RchiOBHm_Chr1g0322701 RchiOBHm_Chr1g0322711 RchiOBHm_Chr1g0322741 RchiOBHm_Chr1g0322781 RchiOBHm_Chr1g0322831 RchiOBHm_Chr1g0322941 RchiOBHm_Chr1g0322961 RchiOBHm_Chr1g0323161 RchiOBHm_Chr1g0323221 RchiOBHm_Chr1g0323401 RchiOBHm_Chr1g0323411 RchiOBHm_Chr1g0323501 RchiOBHm_Chr1g0323611 RchiOBHm_Chr1g0323761 RchiOBHm_Chr1g0328941 RchiOBHm_Chr1g0328951 RchiOBHm_Chr1g0329001 RchiOBHm_Chr2g0101061 RchiOBHm_Chr5g0055671 RchiOBHm_Chr6g0244821 RchiOBHm_Chr6g0244831 RchiOBHm_Chr6g0244851 RchiOBHm_Chr6g0247291 RchiOBHm_Chr6g0247321 RchiOBHm_Chr6g0247331 RchiOBHm_Chr6g0250501 RchiOBHm_Chr6g0250511 RchiOBHm_Chr6g0250551 RchiOBHm_Chr6g0250581 RchiOBHm_Chr6g0250621 RchiOBHm_Chr6g0250681 RchiOBHm_Chr6g0250801 RchiOBHm_Chr6g0250831 RchiOBHm_Chr6g0250871 RchiOBHm_Chr6g0250911 RchiOBHm_Chr6g0250931 RchiOBHm_Chr6g0251011
rosa_laevigata RLG00000002602 RLG00000013892 RLG00000015208 RLG00000015326 RLG00000015500 RLG00000015524 RLG00000015527 RLG00000015528 RLG00000015531 RLG00000015536 RLG00000016540 RLG00000017048 RLG00000023324 RLG00000024652 RLG00000030298 RLG00000030301 RLG00000030303 RLG00000030304 RLG00000030318 RLG00000030322 RLG00000030325 RLG00000030326 RLG00000030331 RLG00000030350 RLG00000030354 RLG00000030357 RLG00000030358 RLG00000030367 RLG00000030369 RLG00000030382 RLG00000030389 RLG00000035003
rosa_multiflora Rmu_sc0000252.1_g000011 Rmu_sc0000252.1_g000020 Rmu_sc0000252.1_g000029 Rmu_sc0000276.1_g000063 Rmu_sc0000504.1_g000023 Rmu_sc0000745.1_g000032 Rmu_sc0000745.1_g000041 Rmu_sc0000749.1_g000028 Rmu_sc0000749.1_g000035 Rmu_sc0000749.1_g000041 Rmu_sc0000749.1_g000052 Rmu_sc0000804.1_g000001 Rmu_sc0001168.1_g000012 Rmu_sc0001209.1_g000011 Rmu_sc0001209.1_g000022 Rmu_sc0001209.1_g000029 Rmu_sc0001209.1_g000031 Rmu_sc0001209.1_g000032 Rmu_sc0001932.1_g000010 Rmu_sc0001932.1_g000023 Rmu_sc0001932.1_g000028 Rmu_sc0002132.1_g000015 Rmu_sc0002132.1_g000031 Rmu_sc0002132.1_g000047 Rmu_sc0002263.1_g000015 Rmu_sc0002263.1_g000024 Rmu_sc0002263.1_g000028 Rmu_sc0002263.1_g000030 Rmu_sc0002263.1_g000039 Rmu_sc0002634.1_g000017 Rmu_sc0002634.1_g000024 Rmu_sc0002634.1_g000038 Rmu_sc0003226.1_g000025 Rmu_sc0003226.1_g000083 Rmu_sc0003226.1_g000084 Rmu_sc0003413.1_g000022 Rmu_sc0003413.1_g000023 Rmu_sc0003418.1_g000011 Rmu_sc0003418.1_g000012 Rmu_sc0003743.1_g000036 Rmu_sc0004185.1_g000005 Rmu_sc0004368.1_g000015 Rmu_sc0004368.1_g000031 Rmu_sc0004368.1_g000032 Rmu_sc0004439.1_g000008 Rmu_sc0006638.1_g000017 Rmu_sc0007485.1_g000009 Rmu_sc0007698.1_g000015 Rmu_sc0009428.1_g000002 Rmu_sc0012920.1_g000010 Rmu_sc0019291.1_g000002 Rmu_sc0026821.1_g000001
rosa_roxburghii Rroxscaffold_160G00433940 Rroxscaffold_180G00433550 Rroxscaffold_1G00024620 Rroxscaffold_2G00121250 Rroxscaffold_2G00141590 Rroxscaffold_2G00146640 Rroxscaffold_2G00146660 Rroxscaffold_4G00320080 Rroxscaffold_4G00321280 Rroxscaffold_4G00326440 Rroxscaffold_4G00326450 Rroxscaffold_4G00326500 Rroxscaffold_4G00326530 Rroxscaffold_4G00326610 Rroxscaffold_4G00326620 Rroxscaffold_4G00326770 Rroxscaffold_4G00326830 Rroxscaffold_4G00326870 Rroxscaffold_4G00326930 Rroxscaffold_4G00326940 Rroxscaffold_4G00326960 Rroxscaffold_4G00326980 Rroxscaffold_4G00327010 Rroxscaffold_4G00327110 Rroxscaffold_4G00327120 Rroxscaffold_4G00327140 Rroxscaffold_4G00327190 Rroxscaffold_4G00327200 Rroxscaffold_4G00327230 Rroxscaffold_4G00327260 Rroxscaffold_4G00327270 Rroxscaffold_4G00327320 Rroxscaffold_4G00327330 Rroxscaffold_7G00198650 Rroxscaffold_7G00214100 Rroxscaffold_7G00217130 Rroxscaffold_7G00217160 Rroxscaffold_7G00217180
rosa_rugosa Rorug01G0034500 Rorug01G0035700 Rorug01G0036000 Rorug01G0036100 Rorug01G0036200 Rorug01G0036700 Rorug01G0037900 Rorug01G0038000 Rorug01G0039000.1 Rorug01G0039400 Rorug02G0096400 Rorug02G0096500 Rorug02G0096600 Rorug02G0096700 Rorug02G0096800 Rorug05G0294500 Rorug05G0497900 Rorug05G0499300 Rorug05G0524600 Rorug06G0043700 Rorug06G0044200 RorugPtG0003400.1
rosa_samantha Rh1BG033300 Rh1BG046700 Rh1BG047600 Rh1BG109300 Rh2CG149400 Rh5CG398600 Rh5CG398700 Rh6DG004400 Rh6DG004700 Rh6DG004900 Rh6DG032100 Rh6DG032400
rosa_wichuraiana Rw0G001800 Rw0G020500 Rw0G020900 Rw1G003430 Rw1G003890 Rw1G004390 Rw1G004400 Rw1G004440 Rw1G004470 Rw1G004490 Rw1G004500 Rw1G004510 Rw1G004570 Rw1G004610 Rw1G004660 Rw1G004680 Rw1G004700 Rw1G004780 Rw1G004800 Rw1G004830 Rw1G005020 Rw2G011250 Rw2G024080 Rw2G024100 Rw3G022830 Rw6G000680 Rw6G000750 Rw6G000780 Rw6G000810 Rw6G000830 Rw6G000860 Rw6G002220 Rw6G002240 Rw6G003350 Rw6G003380 Rw6G003430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 828, 1219
AccII CGCG 1 cut(s) 1921
AciI CCGC 1 cut(s) 1919
AclWI GGATC 2 cut(s) 36, 534
AcsI RAATTY 3 cut(s) 664, 1276, 1474
AcuI CTGAAG 1 cut(s) 872
AfaI GTAC 1 cut(s) 252
AfiI CCNNNNNNNGG 6 cut(s) 828, 869, 1016, 1219, 1312, 1889
AjnI CCWGG 5 cut(s) 577, 1135, 1359, 1369, 1672
AloI GAACNNNNNNTCC 4 cut(s) 398, 430, 1011, 1043
AluBI AGCT 7 cut(s) 308, 372, 467, 714, 782, 1250, 1627
AluI AGCT 7 cut(s) 308, 372, 467, 714, 782, 1250, 1627
Alw26I GTCTC 5 cut(s) 1128, 1164, 1287, 1348, 1520
AlwI GGATC 2 cut(s) 36, 534
AlwNI CAGNNNCTG 1 cut(s) 467
Ama87I CYCGRG 2 cut(s) 303, 1742
AoxI GGCC 5 cut(s) 18, 385, 1327, 1367, 1834
ApeKI GCWGC 2 cut(s) 467, 772
ApoI RAATTY 3 cut(s) 664, 1276, 1474
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
AseI ATTAAT 1 cut(s) 1706
Asp700I GAANNNNTTC 2 cut(s) 713, 1110
AspS9I GGNCC 2 cut(s) 575, 1315
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 1 cut(s) 683
AvaI CYCGRG 2 cut(s) 303, 1742
AvaII GGWCC 2 cut(s) 575, 1315
BauI CACGAG 1 cut(s) 1125
BbsI GAAGAC 2 cut(s) 1286, 1871
BbvI GCAGC 2 cut(s) 454, 759
BccI CCATC 5 cut(s) 29, 72, 896, 1608, 1745
BceAI ACGGC 1 cut(s) 760
BcgI CGANNNNNNTGC 2 cut(s) 1775, 1809
BciT130I CCWGG 5 cut(s) 579, 1137, 1361, 1371, 1674
BciVI GTATCC 2 cut(s) 258, 267
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 5 cut(s) 1128, 1164, 1287, 1348, 1520
BfaI CTAG 4 cut(s) 389, 908, 989, 1697
BfuI GTATCC 2 cut(s) 258, 267
BglI GCCNNNNNGGC 1 cut(s) 1833
BglII AGATCT 2 cut(s) 1385, 1567
BisI GCNGC 2 cut(s) 468, 773
BlsI GCNGC 2 cut(s) 469, 774
Bme1390I CCNGG 6 cut(s) 579, 658, 1137, 1361, 1371, 1674
Bme18I GGWCC 2 cut(s) 575, 1315
BmeT110I CYCGRG 2 cut(s) 303, 1742
BmgT120I GGNCC 2 cut(s) 575, 1315
BmrFI CCNGG 6 cut(s) 579, 658, 1137, 1361, 1371, 1674
BmsI GCATC 4 cut(s) 335, 429, 628, 979
BoxI GACNNNNGTC 1 cut(s) 324
BpiI GAAGAC 2 cut(s) 1286, 1871
BpuEI CTTGAG 7 cut(s) 43, 222, 709, 750, 1372, 1577, 1682
BpuMI CCSGG 1 cut(s) 658
BsaBI GATNNNNATC 1 cut(s) 525
BsaI GGTCTC 2 cut(s) 1164, 1520
BsaJI CCNNGG 5 cut(s) 578, 603, 1213, 1370, 1609
BsaWI WCCGGW 1 cut(s) 1889
BsaXI ACNNNNNCTCC 2 cut(s) 1754, 1784
Bsc4I CCNNNNNNNGG 6 cut(s) 828, 869, 1016, 1219, 1312, 1889
Bse1I ACTGG 3 cut(s) 103, 572, 971
Bse3DI GCAATG 1 cut(s) 1069
Bse8I GATNNNNATC 1 cut(s) 525
BseBI CCWGG 5 cut(s) 579, 1137, 1361, 1371, 1674
BseDI CCNNGG 5 cut(s) 578, 603, 1213, 1370, 1609
BseGI GGATG 7 cut(s) 40, 64, 205, 250, 457, 886, 1583
BseJI GATNNNNATC 1 cut(s) 525
BseLI CCNNNNNNNGG 6 cut(s) 828, 869, 1016, 1219, 1312, 1889
BseMI GCAATG 1 cut(s) 1069
BseMII CTCAG 4 cut(s) 6, 96, 1820, 1925
BseNI ACTGG 3 cut(s) 103, 572, 971
BseRI GAGGAG 1 cut(s) 294
BseXI GCAGC 2 cut(s) 454, 759
BseYI CCCAGC 1 cut(s) 1101
BsgI GTGCAG 1 cut(s) 1846
Bsh1236I CGCG 1 cut(s) 1921
BshFI GGCC 5 cut(s) 20, 387, 1329, 1369, 1836
BsiHKCI CYCGRG 2 cut(s) 303, 1742
BsiSI CCGG 2 cut(s) 657, 1890
BslI CCNNNNNNNGG 6 cut(s) 828, 869, 1016, 1219, 1312, 1889
BsmAI GTCTC 5 cut(s) 1128, 1164, 1287, 1348, 1520
BsmI GAATGC 2 cut(s) 446, 1264
BsnI GGCC 5 cut(s) 20, 387, 1329, 1369, 1836
Bso31I GGTCTC 2 cut(s) 1164, 1520
BsoBI CYCGRG 2 cut(s) 303, 1742
Bsp143I GATC 4 cut(s) 28, 526, 1385, 1567
Bsp19I CCATGG 1 cut(s) 1213
BspACI CCGC 1 cut(s) 1919
BspANI GGCC 5 cut(s) 20, 387, 1329, 1369, 1836
BspCNI CTCAG 4 cut(s) 7, 97, 1821, 1924
BspFNI CGCG 1 cut(s) 1921
BspHI TCATGA 1 cut(s) 1162
BspPI GGATC 2 cut(s) 36, 534
BspQI GCTCTTC 1 cut(s) 684
BspTNI GGTCTC 2 cut(s) 1164, 1520
BsrDI GCAATG 1 cut(s) 1069
BsrI ACTGG 3 cut(s) 103, 572, 971
BssECI CCNNGG 5 cut(s) 578, 603, 1213, 1370, 1609
BssMI GATC 4 cut(s) 28, 526, 1385, 1567
BssSI CACGAG 1 cut(s) 1125
BssT1I CCWWGG 2 cut(s) 1213, 1609
Bst2BI CACGAG 1 cut(s) 1125
Bst2UI CCWGG 5 cut(s) 579, 1137, 1361, 1371, 1674
Bst4CI ACNGT 4 cut(s) 540, 1071, 1633, 1721
Bst6I CTCTTC 1 cut(s) 684
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstC8I GCNNGC 1 cut(s) 300
BstDEI CTNAG 5 cut(s) 15, 105, 1829, 1853, 1911
BstDSI CCRYGG 2 cut(s) 603, 1213
BstF5I GGATG 7 cut(s) 40, 64, 205, 250, 457, 886, 1583
BstFNI CGCG 1 cut(s) 1921
BstKTI GATC 4 cut(s) 31, 529, 1388, 1570
BstMAI GTCTC 5 cut(s) 1128, 1164, 1287, 1348, 1520
BstMBI GATC 4 cut(s) 28, 526, 1385, 1567
BstMWI GCNNNNNNNGC 2 cut(s) 1084, 1833
BstNI CCWGG 5 cut(s) 579, 1137, 1361, 1371, 1674
BstPAI GACNNNNGTC 1 cut(s) 324
BstSCI CCNGG 6 cut(s) 577, 656, 1135, 1359, 1369, 1672
BstUI CGCG 1 cut(s) 1921
BstV1I GCAGC 2 cut(s) 454, 759
BstV2I GAAGAC 2 cut(s) 1286, 1871
BstX2I RGATCY 2 cut(s) 1385, 1567
BstYI RGATCY 2 cut(s) 1385, 1567
BsuI GTATCC 2 cut(s) 258, 267
BsuRI GGCC 5 cut(s) 20, 387, 1329, 1369, 1836
BtgI CCRYGG 2 cut(s) 603, 1213
BtsCI GGATG 7 cut(s) 40, 64, 205, 250, 457, 886, 1583
Cac8I GCNNGC 1 cut(s) 300
CaiI CAGNNNCTG 1 cut(s) 467
CciI TCATGA 1 cut(s) 1162
Cfr13I GGNCC 2 cut(s) 575, 1315
CseI GACGC 2 cut(s) 683, 1754
Csp6I GTAC 1 cut(s) 251
CviAII CATG 6 cut(s) 269, 629, 1079, 1163, 1214, 1219
CviQI GTAC 1 cut(s) 251
DdeI CTNAG 5 cut(s) 15, 105, 1829, 1853, 1911
DpnI GATC 4 cut(s) 30, 528, 1387, 1569
DpnII GATC 4 cut(s) 28, 526, 1385, 1567
DraI TTTAAA 1 cut(s) 696
Eam1104I CTCTTC 1 cut(s) 684
EarI CTCTTC 1 cut(s) 684
Eco130I CCWWGG 2 cut(s) 1213, 1609
Eco147I AGGCCT 2 cut(s) 20, 1329
Eco31I GGTCTC 2 cut(s) 1164, 1520
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 2 cut(s) 575, 1315
Eco57I CTGAAG 1 cut(s) 872
Eco88I CYCGRG 2 cut(s) 303, 1742
EcoRII CCWGG 5 cut(s) 577, 1135, 1359, 1369, 1672
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 2 cut(s) 1213, 1609
EcoT22I ATGCAT 2 cut(s) 446, 1080
ErhI CCWWGG 2 cut(s) 1213, 1609
FaeI CATG 6 cut(s) 272, 632, 1082, 1166, 1217, 1222
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FatI CATG 6 cut(s) 268, 628, 1078, 1162, 1213, 1218
Fnu4HI GCNGC 2 cut(s) 468, 773
FokI GGATG 7 cut(s) 47, 51, 212, 257, 464, 893, 1590
Fsp4HI GCNGC 2 cut(s) 468, 773
FspBI CTAG 4 cut(s) 389, 908, 989, 1697
GluI GCNGC 2 cut(s) 468, 773
GsaI CCCAGC 1 cut(s) 1105
HaeIII GGCC 5 cut(s) 20, 387, 1329, 1369, 1836
HapII CCGG 2 cut(s) 657, 1890
HgaI GACGC 2 cut(s) 683, 1754
Hin1II CATG 6 cut(s) 272, 632, 1082, 1166, 1217, 1222
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 2 cut(s) 712, 1625
HpaII CCGG 2 cut(s) 657, 1890
HphI GGTGA 1 cut(s) 683
Hpy166II GTNNAC 2 cut(s) 178, 1315
Hpy188I TCNGA 4 cut(s) 16, 891, 1551, 1914
Hpy8I GTNNAC 2 cut(s) 178, 1315
Hpy99I CGWCG 2 cut(s) 1119, 1790
HpyAV CCTTC 4 cut(s) 419, 1279, 1328, 1568
HpyCH4III ACNGT 4 cut(s) 540, 1071, 1633, 1721
HpyCH4IV ACGT 1 cut(s) 1144
HpyCH4V TGCA 8 cut(s) 88, 444, 839, 1078, 1228, 1262, 1653, 1863
HpyF10VI GCNNNNNNNGC 2 cut(s) 1084, 1833
HpyF3I CTNAG 5 cut(s) 15, 105, 1829, 1853, 1911
HpySE526I ACGT 1 cut(s) 1144
Hsp92II CATG 6 cut(s) 272, 632, 1082, 1166, 1217, 1222
Kzo9I GATC 4 cut(s) 28, 526, 1385, 1567
LguI GCTCTTC 1 cut(s) 684
LmnI GCTCC 3 cut(s) 464, 582, 1762
Lsp1109I GCAGC 2 cut(s) 454, 759
LweI GCATC 4 cut(s) 335, 429, 628, 979
MaeI CTAG 4 cut(s) 389, 908, 989, 1697
MaeII ACGT 1 cut(s) 1144
MaeIII GTNAC 7 cut(s) 59, 563, 671, 976, 998, 1436, 1856
MalI GATC 4 cut(s) 30, 528, 1387, 1569
MboI GATC 4 cut(s) 28, 526, 1385, 1567
MboII GAAGA 6 cut(s) 51, 159, 671, 1178, 1286, 1871
MfeI CAATTG 3 cut(s) 126, 840, 1818
MflI RGATCY 2 cut(s) 1385, 1567
MlyI GAGTC 2 cut(s) 1130, 1350
MmeI TCCRAC 1 cut(s) 1164
Mph1103I ATGCAT 2 cut(s) 446, 1080
MroXI GAANNNNTTC 2 cut(s) 713, 1110
MseI TTAA 9 cut(s) 662, 695, 1022, 1382, 1479, 1620, 1644, 1706, 1731
MslI CAYNNNNRTG 1 cut(s) 1223
MspI CCGG 2 cut(s) 657, 1890
MspR9I CCNGG 6 cut(s) 579, 658, 1137, 1361, 1371, 1674
MunI CAATTG 3 cut(s) 126, 840, 1818
Mva1269I GAATGC 2 cut(s) 446, 1264
MvaI CCWGG 5 cut(s) 579, 1137, 1361, 1371, 1674
MvnI CGCG 1 cut(s) 1921
MwoI GCNNNNNNNGC 2 cut(s) 1084, 1833
NciI CCSGG 1 cut(s) 658
NcoI CCATGG 1 cut(s) 1213
NdeII GATC 4 cut(s) 28, 526, 1385, 1567
NlaIII CATG 6 cut(s) 272, 632, 1082, 1166, 1217, 1222
NmuCI GTSAC 4 cut(s) 563, 671, 976, 998
NsiI ATGCAT 2 cut(s) 446, 1080
PaeR7I CTCGAG 1 cut(s) 303
PagI TCATGA 1 cut(s) 1162
PceI AGGCCT 2 cut(s) 20, 1329
PciSI GCTCTTC 1 cut(s) 684
PcsI WCGNNNNNNNCGW 1 cut(s) 1123
PctI GAATGC 2 cut(s) 446, 1264
PdmI GAANNNNTTC 2 cut(s) 713, 1110
PfeI GAWTC 8 cut(s) 475, 1552, 1596, 1639, 1666, 1691, 1738, 1915
PflMI CCANNNNNTGG 2 cut(s) 828, 1219
PfoI TCCNGGA 1 cut(s) 1359
PkrI GCNGC 2 cut(s) 469, 774
PleI GAGTC 2 cut(s) 1129, 1350
PpsI GAGTC 2 cut(s) 1129, 1350
PshAI GACNNNNGTC 1 cut(s) 324
PshBI ATTAAT 1 cut(s) 1706
Psp6I CCWGG 5 cut(s) 577, 1135, 1359, 1369, 1672
PspFI CCCAGC 1 cut(s) 1101
PspGI CCWGG 5 cut(s) 577, 1135, 1359, 1369, 1672
PspPI GGNCC 2 cut(s) 575, 1315
PspXI VCTCGAGB 1 cut(s) 303
PstNI CAGNNNCTG 1 cut(s) 467
PsuI RGATCY 2 cut(s) 1385, 1567
RsaI GTAC 1 cut(s) 252
RsaNI GTAC 1 cut(s) 251
RseI CAYNNNNRTG 1 cut(s) 1223
SapI GCTCTTC 1 cut(s) 684
SaqAI TTAA 9 cut(s) 662, 695, 1022, 1382, 1479, 1620, 1644, 1706, 1731
SatI GCNGC 2 cut(s) 468, 773
Sau3AI GATC 4 cut(s) 28, 526, 1385, 1567
Sau96I GGNCC 2 cut(s) 575, 1315
SchI GAGTC 2 cut(s) 1130, 1350
ScrFI CCNGG 6 cut(s) 579, 658, 1137, 1361, 1371, 1674
SfaNI GCATC 4 cut(s) 335, 429, 628, 979
Sfr274I CTCGAG 1 cut(s) 303
SinI GGWCC 2 cut(s) 575, 1315
SlaI CTCGAG 1 cut(s) 303
SmiMI CAYNNNNRTG 1 cut(s) 1223
SmlI CTYRAG 8 cut(s) 22, 237, 303, 688, 765, 1351, 1556, 1661
SmoI CTYRAG 8 cut(s) 22, 237, 303, 688, 765, 1351, 1556, 1661
SseBI AGGCCT 2 cut(s) 20, 1329
SsiI CCGC 1 cut(s) 1919
SspI AATATT 2 cut(s) 930, 1447
SspMI CTAG 4 cut(s) 389, 908, 989, 1697
StuI AGGCCT 2 cut(s) 20, 1329
StyD4I CCNGG 6 cut(s) 577, 656, 1135, 1359, 1369, 1672
StyI CCWWGG 2 cut(s) 1213, 1609
TaaI ACNGT 4 cut(s) 540, 1071, 1633, 1721
TaiI ACGT 1 cut(s) 1147
TaqI TCGA 4 cut(s) 304, 438, 1117, 1785
TfiI GAWTC 8 cut(s) 475, 1552, 1596, 1639, 1666, 1691, 1738, 1915
Tru1I TTAA 9 cut(s) 662, 695, 1022, 1382, 1479, 1620, 1644, 1706, 1731
Tru9I TTAA 9 cut(s) 662, 695, 1022, 1382, 1479, 1620, 1644, 1706, 1731
TseFI GTSAC 4 cut(s) 563, 671, 976, 998
TseI GCWGC 2 cut(s) 467, 772
Tsp45I GTSAC 4 cut(s) 563, 671, 976, 998
TspDTI ATGAA 6 cut(s) 468, 840, 1080, 1179, 1483, 1769
TspGWI ACGGA 4 cut(s) 194, 443, 620, 1295
Van91I CCANNNNNTGG 2 cut(s) 828, 1219
VpaK11BI GGWCC 2 cut(s) 575, 1315
VspI ATTAAT 1 cut(s) 1706
XapI RAATTY 3 cut(s) 664, 1276, 1474
XbaI TCTAGA 2 cut(s) 907, 1696
XcmI CCANNNNNNNNNTGG 1 cut(s) 1607
XhoI CTCGAG 1 cut(s) 303
XmnI GAANNNNTTC 2 cut(s) 713, 1110
XspI CTAG 4 cut(s) 389, 908, 989, 1697
Zsp2I ATGCAT 2 cut(s) 446, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.